Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:32:11 (764849): wrapper (7.7.26015): starting
10:32:11 (764849): wrapper: running run_atlas (--nthreads 12)
[2025-05-05 10:32:11] Arguments: --nthreads 12
[2025-05-05 10:32:11] Threads: 12
[2025-05-05 10:32:11] Checking for CVMFS
[2025-05-05 10:32:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-05 10:32:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-05 10:32:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-05 10:32:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-05 10:32:11] 2.11.5.0 2443 7997 212484 145644 0 170 45137066 45568000 16563 130560 0 78236074 99.764 60581856 22566 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-05 10:32:11] CVMFS is ok
[2025-05-05 10:32:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-05 10:32:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-05 10:32:11] Further information can be found at the LHC@home message board.
[2025-05-05 10:32:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-05 10:32:11] Checking for apptainer binary...
[2025-05-05 10:32:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-05 10:32:11] Running /usr/bin/apptainer --version
[2025-05-05 10:32:11] apptainer version 1.4.0-1.el9
[2025-05-05 10:32:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-05 10:32:12] wns0138.triumf.lcg
[2025-05-05 10:32:12] apptainer works
[2025-05-05 10:32:12] Set ATHENA_PROC_NUMBER=12
[2025-05-05 10:32:12] Set ATHENA_CORE_NUMBER=12
[2025-05-05 10:32:12] Starting ATLAS job with PandaID=6634101566
[2025-05-05 10:32:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-05 11:58:19]  *** The last 200 lines of the pilot log: ***
[2025-05-05 11:58:19]  lfn=log.44506063._003503.job.log.tgz.1
[2025-05-05 11:58:19]  mtime=0
[2025-05-05 11:58:19]  protocol_id=None
[2025-05-05 11:58:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-05 11:58:19]  replicas=None
[2025-05-05 11:58:19]  scope=mc23_13p6TeV
[2025-05-05 11:58:19]  status=None
[2025-05-05 11:58:19]  status_code=0
[2025-05-05 11:58:19]  storage_token=
[2025-05-05 11:58:19]  surl=/home/boinc/slots/0/PanDA_Pilot-6634101566/log.44506063._003503.job.log.tgz.1
[2025-05-05 11:58:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/7c/log.44506063._003503.job.log.tgz.1
[2025-05-05 11:58:19]  workdir=None
[2025-05-05 11:58:19] ]
[2025-05-05 11:58:19] 2025-05-05 18:57:48,583 | INFO     | transferring file log.44506063._003503.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6634101566/log.44506063._003503.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-05-05 11:58:19] 2025-05-05 18:57:48,584 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6634101566/log.44506063._003503.job.log.tgz.1 /home/boinc/slots/0/log.44506063._003503.job.log.t
[2025-05-05 11:58:19] 2025-05-05 18:57:48,618 | INFO     | adding to output.list: log.44506063._003503.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/7c/log.44506063._003503.job.log.tg
[2025-05-05 11:58:19] 2025-05-05 18:57:48,619 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-05 11:58:19] 2025-05-05 18:57:48,619 | INFO     | summary of transferred files:
[2025-05-05 11:58:19] 2025-05-05 18:57:48,619 | INFO     |  -- lfn=log.44506063._003503.job.log.tgz.1, status_code=0, status=transferred
[2025-05-05 11:58:19] 2025-05-05 18:57:48,619 | INFO     | stage-out finished correctly
[2025-05-05 11:58:19] 2025-05-05 18:57:50,735 | INFO     | monitor loop #367: job 0:6634101566 is in state 'finished'
[2025-05-05 11:58:19] 2025-05-05 18:57:50,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-05 11:58:19] 2025-05-05 18:57:51,692 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-05 11:58:19] 2025-05-05 18:57:52,761 | INFO     | job 6634101566 has state=finished
[2025-05-05 11:58:19] 2025-05-05 18:57:52,761 | INFO     | preparing for final server update for job 6634101566 in state='finished'
[2025-05-05 11:58:19] 2025-05-05 18:57:52,761 | INFO     | this job has now completed (state=finished)
[2025-05-05 11:58:19] 2025-05-05 18:57:52,761 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-05 11:58:19] 2025-05-05 18:57:52,762 | INFO     | log transfer has been attempted: DONE
[2025-05-05 11:58:19] 2025-05-05 18:57:52,762 | INFO     | job 6634101566 has finished - writing final server update
[2025-05-05 11:58:19] 2025-05-05 18:57:52,762 | INFO     | total number of processed events: 400 (read)
[2025-05-05 11:58:19] 2025-05-05 18:57:52,765 | INFO     | executing command: lscpu
[2025-05-05 11:58:19] 2025-05-05 18:57:52,810 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-05 11:58:19] 2025-05-05 18:57:53,251 | INFO     | monitor loop #368: job 0:6634101566 is in state 'finished'
[2025-05-05 11:58:19] 2025-05-05 18:57:53,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-05 11:58:19] 2025-05-05 18:57:55,756 | INFO     | monitor loop #369: job 0:6634101566 is in state 'finished'
[2025-05-05 11:58:19] 2025-05-05 18:57:55,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-05 11:58:19] 2025-05-05 18:57:57,964 | INFO     | PID=770643 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-05 11:58:19] 2025-05-05 18:57:57,964 | INFO     | .. there are 28 such processes running
[2025-05-05 11:58:19] 2025-05-05 18:57:58,268 | INFO     | monitor loop #370: job 0:6634101566 is in state 'finished'
[2025-05-05 11:58:19] 2025-05-05 18:57:58,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-05 11:58:19] 2025-05-05 18:57:58,881 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-05 11:58:19] 2025-05-05 18:57:58,882 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6634101566/memory_monitor_summary.json (trf name=prmon)
[2025-05-05 11:58:19] 2025-05-05 18:57:58,882 | INFO     | extracted standard info from prmon json
[2025-05-05 11:58:19] 2025-05-05 18:57:58,882 | INFO     | extracted standard memory fields from prmon json
[2025-05-05 11:58:19] 2025-05-05 18:57:58,882 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-05 11:58:19] 2025-05-05 18:57:58,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-05 11:58:19] 2025-05-05 18:57:58,883 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-05 11:58:19] 2025-05-05 18:57:58,885 | INFO     | fitting pss+swap vs Time
[2025-05-05 11:58:19] 2025-05-05 18:57:58,885 | INFO     | sum of square deviations: 141551122.07792193
[2025-05-05 11:58:19] 2025-05-05 18:57:58,885 | INFO     | sum of deviations: 12245259423.818182
[2025-05-05 11:58:19] 2025-05-05 18:57:58,885 | INFO     | mean x: 1746468993.1948051
[2025-05-05 11:58:19] 2025-05-05 18:57:58,885 | INFO     | mean y: 2714196.5454545454
[2025-05-05 11:58:19] 2025-05-05 18:57:58,885 | INFO     | -- intersect: -151080269699.21106
[2025-05-05 11:58:19] 2025-05-05 18:57:58,885 | INFO     | intersect: -151080269699.21106
[2025-05-05 11:58:19] 2025-05-05 18:57:58,885 | INFO     | chi2: 2.20133063766917
[2025-05-05 11:58:19] 2025-05-05 18:57:58,886 | INFO     | -- intersect: -151080269699.21106
[2025-05-05 11:58:19] 2025-05-05 18:57:58,886 | INFO     | current memory leak: 86.51 B/s (using 77 data points, chi2=2.20)
[2025-05-05 11:58:19] 2025-05-05 18:57:58,886 | INFO     | ..............................
[2025-05-05 11:58:19] 2025-05-05 18:57:58,886 | INFO     | . Timing measurements:
[2025-05-05 11:58:19] 2025-05-05 18:57:58,886 | INFO     | . get job = 0 s
[2025-05-05 11:58:19] 2025-05-05 18:57:58,886 | INFO     | . initial setup = 3 s
[2025-05-05 11:58:19] 2025-05-05 18:57:58,886 | INFO     | . payload setup = 6 s
[2025-05-05 11:58:19] 2025-05-05 18:57:58,886 | INFO     | . stage-in = 0 s
[2025-05-05 11:58:19] 2025-05-05 18:57:58,886 | INFO     | . payload execution = 5098 s
[2025-05-05 11:58:19] 2025-05-05 18:57:58,886 | INFO     | . stage-out = 1 s
[2025-05-05 11:58:19] 2025-05-05 18:57:58,887 | INFO     | . log creation = 0 s
[2025-05-05 11:58:19] 2025-05-05 18:57:58,887 | INFO     | ..............................
[2025-05-05 11:58:19] 2025-05-05 18:57:59,302 | INFO     | 
[2025-05-05 11:58:19] 2025-05-05 18:57:59,303 | INFO     | job summary report
[2025-05-05 11:58:19] 2025-05-05 18:57:59,303 | INFO     | --------------------------------------------------
[2025-05-05 11:58:19] 2025-05-05 18:57:59,303 | INFO     | PanDA job id: 6634101566
[2025-05-05 11:58:19] 2025-05-05 18:57:59,303 | INFO     | task id: 44506063
[2025-05-05 11:58:19] 2025-05-05 18:57:59,303 | INFO     | errors: (none)
[2025-05-05 11:58:19] 2025-05-05 18:57:59,303 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-05 11:58:19] 2025-05-05 18:57:59,304 | INFO     | pilot state: finished 
[2025-05-05 11:58:19] 2025-05-05 18:57:59,304 | INFO     | transexitcode: 0
[2025-05-05 11:58:19] 2025-05-05 18:57:59,304 | INFO     | exeerrorcode: 0
[2025-05-05 11:58:19] 2025-05-05 18:57:59,304 | INFO     | exeerrordiag: 
[2025-05-05 11:58:19] 2025-05-05 18:57:59,305 | INFO     | exitcode: 0
[2025-05-05 11:58:19] 2025-05-05 18:57:59,305 | INFO     | exitmsg: OK
[2025-05-05 11:58:19] 2025-05-05 18:57:59,305 | INFO     | cpuconsumptiontime: 35835 s
[2025-05-05 11:58:19] 2025-05-05 18:57:59,305 | INFO     | nevents: 400
[2025-05-05 11:58:19] 2025-05-05 18:57:59,305 | INFO     | neventsw: 0
[2025-05-05 11:58:19] 2025-05-05 18:57:59,305 | INFO     | pid: 784950
[2025-05-05 11:58:19] 2025-05-05 18:57:59,305 | INFO     | pgrp: 784950
[2025-05-05 11:58:19] 2025-05-05 18:57:59,305 | INFO     | corecount: 12
[2025-05-05 11:58:19] 2025-05-05 18:57:59,305 | INFO     | event service: False
[2025-05-05 11:58:19] 2025-05-05 18:57:59,306 | INFO     | sizes: {0: 2393728, 5: 2393934, 11: 2393990, 5109: 2420280, 5110: 2429215, 5113: 2429271, 5120: 2429569}
[2025-05-05 11:58:19] 2025-05-05 18:57:59,306 | INFO     | --------------------------------------------------
[2025-05-05 11:58:19] 2025-05-05 18:57:59,306 | INFO     | 
[2025-05-05 11:58:19] 2025-05-05 18:57:59,306 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-05 11:58:19] 2025-05-05 18:57:59,325 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-05 11:58:19] 2025-05-05 18:57:59,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-05 11:58:19] 2025-05-05 18:57:59,327 | INFO     | job 6634101566 has completed (purged errors)
[2025-05-05 11:58:19] 2025-05-05 18:57:59,327 | INFO     | overall cleanup function is called
[2025-05-05 11:58:19] 2025-05-05 18:58:00,335 | INFO     | --- collectZombieJob: --- 10, [784950]
[2025-05-05 11:58:19] 2025-05-05 18:58:00,335 | INFO     | zombie collector waiting for pid 784950
[2025-05-05 11:58:19] 2025-05-05 18:58:00,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-05 11:58:19] 2025-05-05 18:58:00,336 | INFO     | collected zombie processes
[2025-05-05 11:58:19] 2025-05-05 18:58:00,336 | INFO     | will attempt to kill all subprocesses of pid=784950
[2025-05-05 11:58:19] 2025-05-05 18:58:00,636 | INFO     | process IDs to be killed: [784950] (in reverse order)
[2025-05-05 11:58:19] 2025-05-05 18:58:00,740 | WARNING  | found no corresponding commands to process id(s)
[2025-05-05 11:58:19] 2025-05-05 18:58:00,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-05 11:58:19] 2025-05-05 18:58:00,750 | INFO     | did not find any defunct processes belonging to 784950
[2025-05-05 11:58:19] 2025-05-05 18:58:00,759 | INFO     | did not find any defunct processes belonging to 784950
[2025-05-05 11:58:19] 2025-05-05 18:58:00,759 | INFO     | ready for new job
[2025-05-05 11:58:19] 2025-05-05 18:58:00,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-05 11:58:19] 2025-05-05 18:58:00,761 | INFO     | **************************************
[2025-05-05 11:58:19] 2025-05-05 18:58:00,761 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-05 11:58:19] 2025-05-05 18:58:00,761 | INFO     | **************************************
[2025-05-05 11:58:19] 2025-05-05 18:58:00,761 | INFO     | 
[2025-05-05 11:58:19] 2025-05-05 18:58:00,764 | INFO     | architecture information:
[2025-05-05 11:58:19] 2025-05-05 18:58:00,764 | INFO     | executing command: cat /etc/os-release
[2025-05-05 11:58:19] 2025-05-05 18:58:00,778 | INFO     | cat /etc/os-release:
[2025-05-05 11:58:19] NAME="CentOS Linux"
[2025-05-05 11:58:19] VERSION="7 (Core)"
[2025-05-05 11:58:19] ID="centos"
[2025-05-05 11:58:19] ID_LIKE="rhel fedora"
[2025-05-05 11:58:19] VERSION_ID="7"
[2025-05-05 11:58:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-05 11:58:19] ANSI_COLOR="0;31"
[2025-05-05 11:58:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-05 11:58:19] HOME_URL="https://www.centos.org/"
[2025-05-05 11:58:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-05 11:58:19] 
[2025-05-05 11:58:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-05 11:58:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-05 11:58:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-05 11:58:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-05 11:58:19] 
[2025-05-05 11:58:19] 2025-05-05 18:58:00,778 | INFO     | **************************************
[2025-05-05 11:58:19] 2025-05-05 18:58:01,281 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-05 11:58:19] 2025-05-05 18:58:01,302 | INFO     | sufficient remaining disk space (1781507555328 B)
[2025-05-05 11:58:19] 2025-05-05 18:58:01,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-05 11:58:19] 2025-05-05 18:58:01,303 | INFO     | current server update state: UPDATING_FINAL
[2025-05-05 11:58:19] 2025-05-05 18:58:01,303 | INFO     | update_server=False
[2025-05-05 11:58:19] 2025-05-05 18:58:01,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-05 11:58:19] 2025-05-05 18:58:01,462 | INFO     | all data control threads have been joined
[2025-05-05 11:58:19] 2025-05-05 18:58:01,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-05 11:58:19] 2025-05-05 18:58:01,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-05 11:58:19] 2025-05-05 18:58:01,786 | INFO     | aborting loop
[2025-05-05 11:58:19] 2025-05-05 18:58:01,979 | INFO     | found 0 job(s) in 20 queues
[2025-05-05 11:58:19] 2025-05-05 18:58:01,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-05 11:58:19] 2025-05-05 18:58:01,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-05 11:58:19] 2025-05-05 18:58:02,292 | INFO     | all job control threads have been joined
[2025-05-05 11:58:19] 2025-05-05 18:58:02,308 | INFO     | [job] retrieve thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:02,322 | INFO     | all payload control threads have been joined
[2025-05-05 11:58:19] 2025-05-05 18:58:02,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-05 11:58:19] 2025-05-05 18:58:02,468 | INFO     | [data] control thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:02,792 | INFO     | [job] job monitor thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:02,832 | INFO     | [data] copytool_in thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:03,069 | INFO     | [payload] validate_post thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:03,124 | INFO     | [payload] validate_pre thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:03,298 | INFO     | [job] control thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:03,327 | INFO     | [payload] control thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:03,579 | INFO     | [payload] execute_payloads thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:03,631 | INFO     | [job] validate thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:03,651 | INFO     | [payload] failed_post thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:03,739 | INFO     | [job] create_data_payload thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:03,756 | INFO     | [data] copytool_out thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:03,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-05 11:58:19] 2025-05-05 18:58:04,975 | INFO     | [job] queue monitor thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:06,341 | INFO     | [data] queue_monitor thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:11,691 | INFO     | job.realtimelogging is not enabled
[2025-05-05 11:58:19] 2025-05-05 18:58:12,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-05 11:58:19] 2025-05-05 18:58:13,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511262201664)>', '<ExcThread(monitor, started 140510551320320)>']
[2025-05-05 11:58:19] 2025-05-05 18:58:14,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-05 11:58:19] 2025-05-05 18:58:14,057 | INFO     | [monitor] control thread has ended
[2025-05-05 11:58:19] 2025-05-05 18:58:18,876 | INFO     | all workflow threads have been joined
[2025-05-05 11:58:19] 2025-05-05 18:58:18,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-05 11:58:19] 2025-05-05 18:58:18,877 | INFO     | traces error code: 0
[2025-05-05 11:58:19] 2025-05-05 18:58:18,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-05 11:58:19] 2025-05-05 18:58:19,146 [wrapper] ==== pilot stdout END ====
[2025-05-05 11:58:19] 2025-05-05 18:58:19,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-05 11:58:19] 2025-05-05 18:58:19,179 [wrapper] pilotpid: 770643
[2025-05-05 11:58:19] 2025-05-05 18:58:19,188 [wrapper] Pilot exit status: 0
[2025-05-05 11:58:19] 2025-05-05 18:58:19,217 [wrapper] pandaids: 6634101566
[2025-05-05 11:58:19] 2025-05-05 18:58:19,280 [wrapper] cleanup supervisor_pilot 1128252 770644
[2025-05-05 11:58:19] 2025-05-05 18:58:19,296 [wrapper] Test setup, not cleaning
[2025-05-05 11:58:19] 2025-05-05 18:58:19,317 [wrapper] apfmon messages muted
[2025-05-05 11:58:19] 2025-05-05 18:58:19,320 [wrapper] ==== wrapper stdout END ====
[2025-05-05 11:58:19] 2025-05-05 18:58:19,326 [wrapper] ==== wrapper stderr END ====
[2025-05-05 11:58:19]  *** Error codes and diagnostics ***
[2025-05-05 11:58:19]     "exeErrorCode": 0,
[2025-05-05 11:58:19]     "exeErrorDiag": "",
[2025-05-05 11:58:19]     "pilotErrorCode": 0,
[2025-05-05 11:58:19]     "pilotErrorDiag": "",
[2025-05-05 11:58:19]  *** Listing of results directory ***
[2025-05-05 11:58:19] total 415364
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc    495897 May  4 22:49 pilot3.tar.gz
[2025-05-05 11:58:19] -rwx------. 1 boinc boinc     37140 May  4 22:57 runpilot2-wrapper.sh
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc      5111 May  4 22:57 queuedata.json
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc       100 May  5 10:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-05 11:58:19] -rwxr-xr-x. 1 boinc boinc      7986 May  5 10:32 run_atlas
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc       105 May  5 10:32 job.xml
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc      6598 May  5 10:32 init_data.xml
[2025-05-05 11:58:19] -rw-r--r--. 2 boinc boinc 222512873 May  5 10:32 EVNT.44506061._000143.pool.root.1
[2025-05-05 11:58:19] drwxrwx--x. 2 boinc boinc      4096 May  5 10:32 shared
[2025-05-05 11:58:19] -rw-r--r--. 2 boinc boinc    508868 May  5 10:32 input.tar.gz
[2025-05-05 11:58:19] -rw-r--r--. 2 boinc boinc     17569 May  5 10:32 start_atlas.sh
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc         0 May  5 10:32 boinc_lockfile
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc      2554 May  5 10:32 pandaJob.out
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc       424 May  5 10:32 setup.sh.local
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc    996576 May  5 10:32 agis_schedconf.cvmfs.json
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc   1596741 May  5 10:32 agis_ddmendpoints.agis.ALL.json
[2025-05-05 11:58:19] drwx------. 4 boinc boinc      4096 May  5 10:32 pilot3
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc 197285864 May  5 11:57 HITS.44506063._003503.pool.root.1
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc       530 May  5 11:57 boinc_task_state.xml
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc      1054 May  5 11:57 memory_monitor_summary.json
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc    355939 May  5 11:57 log.44506063._003503.job.log.tgz.1
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc      8192 May  5 11:57 boinc_mmap_file
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc        27 May  5 11:57 wrapper_checkpoint.txt
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc      7727 May  5 11:57 heartbeat.json
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc        95 May  5 11:57 pilot_heartbeat.json
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc      4424 May  5 11:58 pilotlog.txt
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc    488540 May  5 11:58 log.44506063._003503.job.log.1
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc       357 May  5 11:58 output.list
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc       620 May  5 11:58 runtime_log
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc    860160 May  5 11:58 result.tar.gz
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc     10979 May  5 11:58 runtime_log.err
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc       659 May  5 11:58 qc1KDmu03V7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmvM0LDmkVvYFn.diag
[2025-05-05 11:58:19] -rw-r--r--. 1 boinc boinc     21633 May  5 11:58 stderr.txt
[2025-05-05 11:58:19] HITS file was successfully produced:
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc 197285864 May  5 11:57 shared/HITS.pool.root.1
[2025-05-05 11:58:19]  *** Contents of shared directory: ***
[2025-05-05 11:58:19] total 411332
[2025-05-05 11:58:19] -rw-r--r--. 2 boinc boinc 222512873 May  5 10:32 ATLAS.root_0
[2025-05-05 11:58:19] -rw-r--r--. 2 boinc boinc    508868 May  5 10:32 input.tar.gz
[2025-05-05 11:58:19] -rw-r--r--. 2 boinc boinc     17569 May  5 10:32 start_atlas.sh
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc 197285864 May  5 11:57 HITS.pool.root.1
[2025-05-05 11:58:19] -rw-------. 1 boinc boinc    860160 May  5 11:58 result.tar.gz
11:58:20 (764849): run_atlas exited; CPU time 35892.527004
11:58:20 (764849): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN