Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:33:54 (4169372): wrapper (7.7.26015): starting
15:33:54 (4169372): wrapper: running run_atlas (--nthreads 12)
[2025-05-05 15:33:54] Arguments: --nthreads 12
[2025-05-05 15:33:54] Threads: 12
[2025-05-05 15:33:54] Checking for CVMFS
[2025-05-05 15:33:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-05 15:33:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-05 15:33:54] Running cvmfs_config stat atlas.cern.ch
[2025-05-05 15:33:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-05 15:33:55] 2.12.7.0 8982 9387 552740 145638 3 680 24262596 46080001 8675 130560 133 254757327 99.949 48583464 1916 http://cvmfs-stratum-one.ihep.ac.cn:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-05-05 15:33:55] CVMFS is ok
[2025-05-05 15:33:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-05 15:33:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-05 15:33:55] Further information can be found at the LHC@home message board.
[2025-05-05 15:33:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-05 15:33:55] Checking for apptainer binary...
[2025-05-05 15:33:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-05 15:33:55] Running /usr/bin/apptainer --version
[2025-05-05 15:33:55] apptainer version 1.4.0-1.el9
[2025-05-05 15:33:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-05 15:33:55] mff2103.farm.particle.cz
[2025-05-05 15:33:55] apptainer works
[2025-05-05 15:33:55] Set ATHENA_PROC_NUMBER=12
[2025-05-05 15:33:55] Set ATHENA_CORE_NUMBER=12
[2025-05-05 15:33:55] Starting ATLAS job with PandaID=6634098595
[2025-05-05 15:33:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-05 17:14:27]  *** The last 200 lines of the pilot log: ***
[2025-05-05 17:14:27]  mtime=0
[2025-05-05 17:14:27]  protocol_id=None
[2025-05-05 17:14:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-05 17:14:27]  replicas=None
[2025-05-05 17:14:27]  scope=mc23_13p6TeV
[2025-05-05 17:14:27]  status=None
[2025-05-05 17:14:27]  status_code=0
[2025-05-05 17:14:27]  storage_token=
[2025-05-05 17:14:27]  surl=/scratch/.boinc/slots/0/PanDA_Pilot-6634098595/log.44506063._003378.job.log.tgz.1
[2025-05-05 17:14:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/5b/log.44506063._003378.job.log.tgz.1
[2025-05-05 17:14:27]  workdir=None
[2025-05-05 17:14:27] ]
[2025-05-05 17:14:27] 2025-05-05 15:10:10,702 | INFO     | transferring file log.44506063._003378.job.log.tgz.1 from /scratch/.boinc/slots/0/PanDA_Pilot-6634098595/log.44506063._003378.job.log.tgz.1 to /scratch/.boinc/slot
[2025-05-05 17:14:27] 2025-05-05 15:10:10,703 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/0/PanDA_Pilot-6634098595/log.44506063._003378.job.log.tgz.1 /scratch/.boinc/slots/0/log.44506063._003378.j
[2025-05-05 17:14:27] 2025-05-05 15:10:10,728 | INFO     | adding to output.list: log.44506063._003378.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/5b/log.44506063._003378.job.log.tg
[2025-05-05 17:14:27] 2025-05-05 15:10:10,729 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-05 17:14:27] 2025-05-05 15:10:10,729 | INFO     | summary of transferred files:
[2025-05-05 17:14:27] 2025-05-05 15:10:10,729 | INFO     |  -- lfn=log.44506063._003378.job.log.tgz.1, status_code=0, status=transferred
[2025-05-05 17:14:27] 2025-05-05 15:10:10,729 | INFO     | stage-out finished correctly
[2025-05-05 17:14:27] 2025-05-05 15:10:11,281 | WARNING  | process 10884 can no longer be monitored (due to stat problems) - aborting
[2025-05-05 17:14:27] 2025-05-05 15:10:11,281 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6634098595/memory_monitor_summary.json (trf name=prmon)
[2025-05-05 17:14:27] 2025-05-05 15:10:11,640 | INFO     | number of running child processes to parent process 10884: 1
[2025-05-05 17:14:27] 2025-05-05 15:10:11,640 | INFO     | maximum number of monitored processes: 6
[2025-05-05 17:14:27] 2025-05-05 15:10:11,689 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-05 17:14:27] 2025-05-05 15:10:12,628 | INFO     | job 6634098595 has state=finished
[2025-05-05 17:14:27] 2025-05-05 15:10:12,628 | INFO     | preparing for final server update for job 6634098595 in state='finished'
[2025-05-05 17:14:27] 2025-05-05 15:10:12,629 | INFO     | this job has now completed (state=finished)
[2025-05-05 17:14:27] 2025-05-05 15:10:12,629 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-05 17:14:27] 2025-05-05 15:10:12,629 | INFO     | log transfer has been attempted: DONE
[2025-05-05 17:14:27] 2025-05-05 15:10:12,629 | INFO     | job 6634098595 has finished - writing final server update
[2025-05-05 17:14:27] 2025-05-05 15:10:12,629 | INFO     | total number of processed events: 400 (read)
[2025-05-05 17:14:27] 2025-05-05 15:10:12,636 | INFO     | executing command: lscpu
[2025-05-05 17:14:27] 2025-05-05 15:10:12,728 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-05 17:14:27] 2025-05-05 15:10:14,144 | INFO     | monitor loop #390: job 0:6634098595 is in state 'finished'
[2025-05-05 17:14:27] 2025-05-05 15:10:14,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-05 17:14:27] 2025-05-05 15:10:16,648 | INFO     | monitor loop #391: job 0:6634098595 is in state 'finished'
[2025-05-05 17:14:27] 2025-05-05 15:10:16,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-05 17:14:27] 2025-05-05 15:10:18,861 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-05 17:14:27] 2025-05-05 15:10:18,861 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6634098595/memory_monitor_summary.json (trf name=prmon)
[2025-05-05 17:14:27] 2025-05-05 15:10:18,862 | INFO     | extracted standard info from prmon json
[2025-05-05 17:14:27] 2025-05-05 15:10:18,862 | INFO     | extracted standard memory fields from prmon json
[2025-05-05 17:14:27] 2025-05-05 15:10:18,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-05 17:14:27] 2025-05-05 15:10:18,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-05 17:14:27] 2025-05-05 15:10:18,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-05 17:14:27] 2025-05-05 15:10:18,864 | INFO     | fitting pss+swap vs Time
[2025-05-05 17:14:27] 2025-05-05 15:10:18,865 | INFO     | sum of square deviations: 204162364.9885056
[2025-05-05 17:14:27] 2025-05-05 15:10:18,865 | INFO     | sum of deviations: 28162431384.45978
[2025-05-05 17:14:27] 2025-05-05 15:10:18,865 | INFO     | mean x: 1746455007.0114942
[2025-05-05 17:14:27] 2025-05-05 15:10:18,865 | INFO     | mean y: 2565762.540229885
[2025-05-05 17:14:27] 2025-05-05 15:10:18,865 | INFO     | -- intersect: -240905788251.56287
[2025-05-05 17:14:27] 2025-05-05 15:10:18,865 | INFO     | intersect: -240905788251.56287
[2025-05-05 17:14:27] 2025-05-05 15:10:18,866 | INFO     | chi2: 1.9370564210097854
[2025-05-05 17:14:27] 2025-05-05 15:10:18,866 | INFO     | -- intersect: -240905788251.56287
[2025-05-05 17:14:27] 2025-05-05 15:10:18,866 | INFO     | current memory leak: 137.94 B/s (using 87 data points, chi2=1.94)
[2025-05-05 17:14:27] 2025-05-05 15:10:18,866 | INFO     | ..............................
[2025-05-05 17:14:27] 2025-05-05 15:10:18,866 | INFO     | . Timing measurements:
[2025-05-05 17:14:27] 2025-05-05 15:10:18,866 | INFO     | . get job = 0 s
[2025-05-05 17:14:27] 2025-05-05 15:10:18,866 | INFO     | . initial setup = 2 s
[2025-05-05 17:14:27] 2025-05-05 15:10:18,866 | INFO     | . payload setup = 7 s
[2025-05-05 17:14:27] 2025-05-05 15:10:18,866 | INFO     | . stage-in = 0 s
[2025-05-05 17:14:27] 2025-05-05 15:10:18,866 | INFO     | . payload execution = 5733 s
[2025-05-05 17:14:27] 2025-05-05 15:10:18,867 | INFO     | . stage-out = 0 s
[2025-05-05 17:14:27] 2025-05-05 15:10:18,867 | INFO     | . log creation = 0 s
[2025-05-05 17:14:27] 2025-05-05 15:10:18,868 | INFO     | ..............................
[2025-05-05 17:14:27] 2025-05-05 15:10:18,968 | INFO     | 
[2025-05-05 17:14:27] 2025-05-05 15:10:18,968 | INFO     | job summary report
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | --------------------------------------------------
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | PanDA job id: 6634098595
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | task id: 44506063
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | errors: (none)
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | pilot state: finished 
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | transexitcode: 0
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | exeerrorcode: 0
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | exeerrordiag: 
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | exitcode: 0
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | exitmsg: OK
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | cpuconsumptiontime: 41482 s
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | nevents: 400
[2025-05-05 17:14:27] 2025-05-05 15:10:18,969 | INFO     | neventsw: 0
[2025-05-05 17:14:27] 2025-05-05 15:10:18,970 | INFO     | pid: 10884
[2025-05-05 17:14:27] 2025-05-05 15:10:18,970 | INFO     | pgrp: 10884
[2025-05-05 17:14:27] 2025-05-05 15:10:18,970 | INFO     | corecount: 12
[2025-05-05 17:14:27] 2025-05-05 15:10:18,970 | INFO     | event service: False
[2025-05-05 17:14:27] 2025-05-05 15:10:18,970 | INFO     | sizes: {0: 2393562, 1: 2393761, 7: 2393967, 11: 2393995, 5744: 2420635, 5746: 2429578, 5747: 2429762, 5754: 2429932}
[2025-05-05 17:14:27] 2025-05-05 15:10:18,970 | INFO     | --------------------------------------------------
[2025-05-05 17:14:27] 2025-05-05 15:10:18,970 | INFO     | 
[2025-05-05 17:14:27] 2025-05-05 15:10:18,970 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-05-05 17:14:27] 2025-05-05 15:10:19,000 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,001 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,001 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,001 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,001 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | job 6634098595 has completed (purged errors)
[2025-05-05 17:14:27] 2025-05-05 15:10:19,002 | INFO     | overall cleanup function is called
[2025-05-05 17:14:27] 2025-05-05 15:10:20,011 | INFO     | --- collectZombieJob: --- 10, [10884]
[2025-05-05 17:14:27] 2025-05-05 15:10:20,012 | INFO     | zombie collector waiting for pid 10884
[2025-05-05 17:14:27] 2025-05-05 15:10:20,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-05 17:14:27] 2025-05-05 15:10:20,012 | INFO     | collected zombie processes
[2025-05-05 17:14:27] 2025-05-05 15:10:20,012 | INFO     | will attempt to kill all subprocesses of pid=10884
[2025-05-05 17:14:27] 2025-05-05 15:10:20,483 | INFO     | process IDs to be killed: [10884] (in reverse order)
[2025-05-05 17:14:27] 2025-05-05 15:10:20,646 | WARNING  | found no corresponding commands to process id(s)
[2025-05-05 17:14:27] 2025-05-05 15:10:20,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-05 17:14:27] 2025-05-05 15:10:20,664 | INFO     | did not find any defunct processes belonging to 10884
[2025-05-05 17:14:27] 2025-05-05 15:10:20,678 | INFO     | did not find any defunct processes belonging to 10884
[2025-05-05 17:14:27] 2025-05-05 15:10:20,678 | INFO     | ready for new job
[2025-05-05 17:14:27] 2025-05-05 15:10:20,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-05 17:14:27] 2025-05-05 15:10:20,680 | INFO     | **************************************
[2025-05-05 17:14:27] 2025-05-05 15:10:20,680 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-05 17:14:27] 2025-05-05 15:10:20,680 | INFO     | **************************************
[2025-05-05 17:14:27] 2025-05-05 15:10:20,680 | INFO     | 
[2025-05-05 17:14:27] 2025-05-05 15:10:20,686 | INFO     | architecture information:
[2025-05-05 17:14:27] 2025-05-05 15:10:20,687 | INFO     | executing command: cat /etc/os-release
[2025-05-05 17:14:27] 2025-05-05 15:10:20,714 | INFO     | cat /etc/os-release:
[2025-05-05 17:14:27] NAME="CentOS Linux"
[2025-05-05 17:14:27] VERSION="7 (Core)"
[2025-05-05 17:14:27] ID="centos"
[2025-05-05 17:14:27] ID_LIKE="rhel fedora"
[2025-05-05 17:14:27] VERSION_ID="7"
[2025-05-05 17:14:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-05 17:14:27] ANSI_COLOR="0;31"
[2025-05-05 17:14:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-05 17:14:27] HOME_URL="https://www.centos.org/"
[2025-05-05 17:14:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-05 17:14:27] 
[2025-05-05 17:14:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-05 17:14:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-05 17:14:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-05 17:14:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-05 17:14:27] 
[2025-05-05 17:14:27] 2025-05-05 15:10:20,715 | INFO     | **************************************
[2025-05-05 17:14:27] 2025-05-05 15:10:21,218 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-05-05 17:14:27] 2025-05-05 15:10:21,247 | INFO     | sufficient remaining disk space (1552290938880 B)
[2025-05-05 17:14:27] 2025-05-05 15:10:21,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-05 17:14:27] 2025-05-05 15:10:21,248 | INFO     | current server update state: UPDATING_FINAL
[2025-05-05 17:14:27] 2025-05-05 15:10:21,248 | INFO     | update_server=False
[2025-05-05 17:14:27] 2025-05-05 15:10:21,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-05 17:14:27] 2025-05-05 15:10:21,249 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-05 17:14:27] 2025-05-05 15:10:21,249 | INFO     | found 0 job(s) in 20 queues
[2025-05-05 17:14:27] 2025-05-05 15:10:21,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-05 17:14:27] 2025-05-05 15:10:21,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-05 17:14:27] 2025-05-05 15:10:21,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-05 17:14:27] 2025-05-05 15:10:21,662 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-05 17:14:27] 2025-05-05 15:10:21,662 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-05 17:14:27] 2025-05-05 15:10:21,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-05 17:14:27] 2025-05-05 15:10:21,663 | INFO     | will abort loop
[2025-05-05 17:14:27] 2025-05-05 15:10:21,669 | INFO     | all job control threads have been joined
[2025-05-05 17:14:27] 2025-05-05 15:10:21,852 | INFO     | all payload control threads have been joined
[2025-05-05 17:14:27] 2025-05-05 15:10:21,879 | INFO     | all data control threads have been joined
[2025-05-05 17:14:27] 2025-05-05 15:10:22,253 | INFO     | [job] retrieve thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:22,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-05 17:14:27] 2025-05-05 15:10:22,613 | INFO     | [payload] failed_post thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:22,668 | INFO     | [job] job monitor thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:22,674 | INFO     | [job] control thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:22,689 | INFO     | [job] validate thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:22,792 | INFO     | [payload] validate_post thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:22,858 | INFO     | [payload] control thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:22,886 | INFO     | [data] control thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:22,931 | INFO     | [job] create_data_payload thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:23,236 | INFO     | [data] copytool_in thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:23,345 | INFO     | [data] copytool_out thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:23,376 | INFO     | [payload] execute_payloads thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:23,722 | INFO     | [payload] validate_pre thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:23,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-05 17:14:27] 2025-05-05 15:10:24,987 | INFO     | [job] queue monitor thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:26,296 | INFO     | [data] queue_monitor thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:32,105 | INFO     | job.realtimelogging is not enabled
[2025-05-05 17:14:27] 2025-05-05 15:10:33,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-05 17:14:27] 2025-05-05 15:10:35,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720323389248)>', '<ExcThread(monitor, started 139719824361216)>']
[2025-05-05 17:14:27] 2025-05-05 15:10:35,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-05 17:14:27] 2025-05-05 15:10:35,325 | INFO     | [monitor] control thread has ended
[2025-05-05 17:14:27] 2025-05-05 15:10:40,137 | INFO     | all workflow threads have been joined
[2025-05-05 17:14:27] 2025-05-05 15:10:40,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-05 17:14:27] 2025-05-05 15:10:40,137 | INFO     | traces error code: 0
[2025-05-05 17:14:27] 2025-05-05 15:10:40,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-05 17:14:27] 2025-05-05 15:10:40,247 [wrapper] ==== pilot stdout END ====
[2025-05-05 17:14:27] 2025-05-05 15:10:40,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-05 17:14:27] 2025-05-05 15:10:40,254 [wrapper] pilotpid: 4180789
[2025-05-05 17:14:27] 2025-05-05 15:10:40,258 [wrapper] Pilot exit status: 0
[2025-05-05 17:14:27] 2025-05-05 15:10:40,273 [wrapper] pandaids: 6634098595
[2025-05-05 17:14:27] 2025-05-05 15:10:40,378 [wrapper] cleanup supervisor_pilot  710295 4180790
[2025-05-05 17:14:27] 2025-05-05 15:10:40,381 [wrapper] Test setup, not cleaning
[2025-05-05 17:14:27] 2025-05-05 15:10:40,390 [wrapper] apfmon messages muted
[2025-05-05 17:14:27] 2025-05-05 15:10:40,394 [wrapper] ==== wrapper stdout END ====
[2025-05-05 17:14:27] 2025-05-05 15:10:40,397 [wrapper] ==== wrapper stderr END ====
[2025-05-05 17:14:27]  *** Error codes and diagnostics ***
[2025-05-05 17:14:27]     "exeErrorCode": 0,
[2025-05-05 17:14:27]     "exeErrorDiag": "",
[2025-05-05 17:14:27]     "pilotErrorCode": 0,
[2025-05-05 17:14:27]     "pilotErrorDiag": "",
[2025-05-05 17:14:27]  *** Listing of results directory ***
[2025-05-05 17:14:27] total 416268
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc    495897 May  5 07:49 pilot3.tar.gz
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc      5111 May  5 07:54 queuedata.json
[2025-05-05 17:14:27] -rwx------ 1 boinc boinc     37140 May  5 07:54 runpilot2-wrapper.sh
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc       100 May  5 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-05 17:14:27] -rwxr-xr-x 1 boinc boinc      7986 May  5 15:33 run_atlas
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc       105 May  5 15:33 job.xml
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc      6654 May  5 15:33 init_data.xml
[2025-05-05 17:14:27] -rw-r--r-- 2 boinc boinc 224495003 May  5 15:33 EVNT.44506061._000137.pool.root.1
[2025-05-05 17:14:27] -rw-r--r-- 2 boinc boinc     17569 May  5 15:33 start_atlas.sh
[2025-05-05 17:14:27] drwxrwx--x 2 boinc boinc      4096 May  5 15:33 shared
[2025-05-05 17:14:27] -rw-r--r-- 2 boinc boinc    508873 May  5 15:33 input.tar.gz
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc         0 May  5 15:33 boinc_lockfile
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc      2555 May  5 15:33 pandaJob.out
[2025-05-05 17:14:27] -rw------- 1 boinc boinc       424 May  5 15:33 setup.sh.local
[2025-05-05 17:14:27] -rw------- 1 boinc boinc    995809 May  5 15:34 agis_schedconf.cvmfs.json
[2025-05-05 17:14:27] -rw------- 1 boinc boinc   1596741 May  5 15:34 agis_ddmendpoints.agis.ALL.json
[2025-05-05 17:14:27] drwx------ 4 boinc boinc      4096 May  5 15:34 pilot3
[2025-05-05 17:14:27] -rw------- 1 boinc boinc 196108737 May  5 17:09 HITS.44506063._003378.pool.root.1
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc       529 May  5 17:09 boinc_task_state.xml
[2025-05-05 17:14:27] -rw------- 1 boinc boinc        95 May  5 17:09 pilot_heartbeat.json
[2025-05-05 17:14:27] -rw------- 1 boinc boinc      1030 May  5 17:10 memory_monitor_summary.json
[2025-05-05 17:14:27] -rw------- 1 boinc boinc    363425 May  5 17:10 log.44506063._003378.job.log.tgz.1
[2025-05-05 17:14:27] -rw------- 1 boinc boinc      7690 May  5 17:10 heartbeat.json
[2025-05-05 17:14:27] -rw------- 1 boinc boinc      4737 May  5 17:10 pilotlog.txt
[2025-05-05 17:14:27] -rw------- 1 boinc boinc    538963 May  5 17:10 log.44506063._003378.job.log.1
[2025-05-05 17:14:27] -rw------- 1 boinc boinc       357 May  5 17:10 output.list
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc       620 May  5 17:10 runtime_log
[2025-05-05 17:14:27] -rw------- 1 boinc boinc    921600 May  5 17:10 result.tar.gz
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc     11078 May  5 17:10 runtime_log.err
[2025-05-05 17:14:27] -rw------- 1 boinc boinc       663 May  5 17:10 HrrMDmcx3V7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjL0LDmEUgX6n.diag
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc        26 May  5 17:14 wrapper_checkpoint.txt
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc      8192 May  5 17:14 boinc_mmap_file
[2025-05-05 17:14:27] -rw-r--r-- 1 boinc boinc     21675 May  5 17:14 stderr.txt
[2025-05-05 17:14:27] HITS file was successfully produced:
[2025-05-05 17:14:27] -rw------- 1 boinc boinc 196108737 May  5 17:09 shared/HITS.pool.root.1
[2025-05-05 17:14:27]  *** Contents of shared directory: ***
[2025-05-05 17:14:27] total 412180
[2025-05-05 17:14:27] -rw-r--r-- 2 boinc boinc 224495003 May  5 15:33 ATLAS.root_0
[2025-05-05 17:14:27] -rw-r--r-- 2 boinc boinc     17569 May  5 15:33 start_atlas.sh
[2025-05-05 17:14:27] -rw-r--r-- 2 boinc boinc    508873 May  5 15:33 input.tar.gz
[2025-05-05 17:14:27] -rw------- 1 boinc boinc 196108737 May  5 17:09 HITS.pool.root.1
[2025-05-05 17:14:27] -rw------- 1 boinc boinc    921600 May  5 17:10 result.tar.gz
17:14:29 (4169372): run_atlas exited; CPU time 41625.364801
17:14:29 (4169372): called boinc_finish(0)

</stderr_txt>
]]>

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