Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:10:49 (17506): wrapper (7.7.26015): starting
17:10:49 (17506): wrapper: running run_atlas (--nthreads 8)
[2025-05-05 17:10:49] Arguments: --nthreads 8
[2025-05-05 17:10:49] Threads: 8
[2025-05-05 17:10:49] Checking for CVMFS
[2025-05-05 17:10:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-05 17:10:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-05 17:10:49] Running cvmfs_config stat atlas.cern.ch
[2025-05-05 17:10:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-05 17:10:49] 2.11.2.0 19354 478 48628 145640 0 16 24114332 25165824 96 130560 0 98761 97.372 269623 3066 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-05 17:10:49] CVMFS is ok
[2025-05-05 17:10:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-05 17:10:49] Checking for apptainer binary...
[2025-05-05 17:10:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-05 17:10:49] Running /usr/bin/apptainer --version
[2025-05-05 17:10:49] apptainer version 1.3.2-1.el7
[2025-05-05 17:10:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-05 17:10:50] cg-vwn484.simple-grid.lan
[2025-05-05 17:10:50] apptainer works
[2025-05-05 17:10:50] Set ATHENA_PROC_NUMBER=8
[2025-05-05 17:10:50] Set ATHENA_CORE_NUMBER=8
[2025-05-05 17:10:50] Starting ATLAS job with PandaID=6634098561
[2025-05-05 17:10:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-06 01:28:24]  *** The last 200 lines of the pilot log: ***
[2025-05-06 01:28:24] 2025-05-05 19:11:04,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-06 01:28:24] 2025-05-05 19:11:04,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-06 01:28:24] 2025-05-05 19:11:04,748 | INFO     | fitting pss+swap vs Time
[2025-05-06 01:28:24] 2025-05-05 19:11:04,749 | INFO     | sum of square deviations: 3972995422.5
[2025-05-06 01:28:24] 2025-05-05 19:11:04,751 | INFO     | sum of deviations: 102923917282.49998
[2025-05-06 01:28:24] 2025-05-05 19:11:04,751 | INFO     | mean x: 1746465006.5
[2025-05-06 01:28:24] 2025-05-05 19:11:04,751 | INFO     | mean y: 2421621.594017094
[2025-05-06 01:28:24] 2025-05-05 19:11:04,751 | INFO     | -- intersect: -45241280107.283775
[2025-05-06 01:28:24] 2025-05-05 19:11:04,752 | INFO     | intersect: -45241280107.283775
[2025-05-06 01:28:24] 2025-05-05 19:11:04,752 | INFO     | chi2: 4.709890533088223
[2025-05-06 01:28:24] 2025-05-05 19:11:04,761 | INFO     | sum of square deviations: 3723716330.0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,763 | INFO     | sum of deviations: 115799646094.00002
[2025-05-06 01:28:24] 2025-05-05 19:11:04,764 | INFO     | mean x: 1746464854.0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,764 | INFO     | mean y: 2429333.9825327513
[2025-05-06 01:28:24] 2025-05-05 19:11:04,764 | INFO     | -- intersect: -54308907536.516785
[2025-05-06 01:28:24] 2025-05-05 19:11:04,764 | INFO     | intersect: -54308907536.516785
[2025-05-06 01:28:24] 2025-05-05 19:11:04,764 | INFO     | chi2: 3.9498924048775454
[2025-05-06 01:28:24] 2025-05-05 19:11:04,764 | INFO     | current chi2=3.9498924048775454 (change=16.13621639126197 %)
[2025-05-06 01:28:24] 2025-05-05 19:11:04,765 | INFO     | right removable region: 228
[2025-05-06 01:28:24] 2025-05-05 19:11:04,765 | INFO     | sum of square deviations: 3723716330.0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,767 | INFO     | sum of deviations: 45585512401.99999
[2025-05-06 01:28:24] 2025-05-05 19:11:04,767 | INFO     | mean x: 1746465159.0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,767 | INFO     | mean y: 2456598.7248908295
[2025-05-06 01:28:24] 2025-05-05 19:11:04,767 | INFO     | -- intersect: -21377665330.502563
[2025-05-06 01:28:24] 2025-05-05 19:11:04,767 | INFO     | intersect: -21377665330.502563
[2025-05-06 01:28:24] 2025-05-05 19:11:04,768 | INFO     | chi2: 2.2454911959662827
[2025-05-06 01:28:24] 2025-05-05 19:11:04,768 | INFO     | current chi2=2.2454911959662827 (change=52.32391962846875 %)
[2025-05-06 01:28:24] 2025-05-05 19:11:04,768 | INFO     | sum of square deviations: 3485088600.0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,770 | INFO     | sum of deviations: 4157587400.5000076
[2025-05-06 01:28:24] 2025-05-05 19:11:04,770 | INFO     | mean x: 1746465311.5
[2025-05-06 01:28:24] 2025-05-05 19:11:04,771 | INFO     | mean y: 2483074.9241071427
[2025-05-06 01:28:24] 2025-05-05 19:11:04,771 | INFO     | -- intersect: -2080988253.3235364
[2025-05-06 01:28:24] 2025-05-05 19:11:04,771 | INFO     | intersect: -2080988253.3235364
[2025-05-06 01:28:24] 2025-05-05 19:11:04,771 | INFO     | chi2: 1.0803128617000584
[2025-05-06 01:28:24] 2025-05-05 19:11:04,771 | INFO     | current chi2=1.0803128617000584 (change=51.88968615683319 %)
[2025-05-06 01:28:24] 2025-05-05 19:11:04,772 | INFO     | sum of square deviations: 3256879670.0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,780 | INFO     | sum of deviations: -9716466435.0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,780 | INFO     | mean x: 1746465464.0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,780 | INFO     | mean y: 2492244.228310502
[2025-05-06 01:28:24] 2025-05-05 19:11:04,780 | INFO     | -- intersect: 5212839195.9911
[2025-05-06 01:28:24] 2025-05-05 19:11:04,780 | INFO     | intersect: 5212839195.9911
[2025-05-06 01:28:24] 2025-05-05 19:11:04,780 | INFO     | chi2: 0.8278911688182837
[2025-05-06 01:28:24] 2025-05-05 19:11:04,780 | INFO     | current chi2=0.8278911688182837 (change=23.365610262618333 %)
[2025-05-06 01:28:24] 2025-05-05 19:11:04,781 | INFO     | left removable region: 30
[2025-05-06 01:28:24] 2025-05-05 19:11:04,781 | INFO     | sum of square deviations: 2406926989.5
[2025-05-06 01:28:24] 2025-05-05 19:11:04,782 | INFO     | sum of deviations: 6809932304.5
[2025-05-06 01:28:24] 2025-05-05 19:11:04,782 | INFO     | mean x: 1746465738.5
[2025-05-06 01:28:24] 2025-05-05 19:11:04,782 | INFO     | mean y: 2500610.9242424243
[2025-05-06 01:28:24] 2025-05-05 19:11:04,782 | INFO     | -- intersect: -4938784896.777943
[2025-05-06 01:28:24] 2025-05-05 19:11:04,782 | INFO     | intersect: -4938784896.777943
[2025-05-06 01:28:24] 2025-05-05 19:11:04,783 | INFO     | chi2: 0.00036502607470982227
[2025-05-06 01:28:24] 2025-05-05 19:11:04,783 | INFO     | -- intersect: -4938784896.777943
[2025-05-06 01:28:24] 2025-05-05 19:11:04,783 | INFO     | current memory leak: 2.83 B/s (using 198 data points, chi2=0.00)
[2025-05-06 01:28:24] 2025-05-05 19:11:04,783 | INFO     | ..............................
[2025-05-06 01:28:24] 2025-05-05 19:11:04,784 | INFO     | . Timing measurements:
[2025-05-06 01:28:24] 2025-05-05 19:11:04,784 | INFO     | . get job = 0 s
[2025-05-06 01:28:24] 2025-05-05 19:11:04,784 | INFO     | . initial setup = 2 s
[2025-05-06 01:28:24] 2025-05-05 19:11:04,784 | INFO     | . payload setup = 8 s
[2025-05-06 01:28:24] 2025-05-05 19:11:04,784 | INFO     | . stage-in = 0 s
[2025-05-06 01:28:24] 2025-05-05 19:11:04,784 | INFO     | . payload execution = 14260 s
[2025-05-06 01:28:24] 2025-05-05 19:11:04,784 | INFO     | . stage-out = 3 s
[2025-05-06 01:28:24] 2025-05-05 19:11:04,784 | INFO     | . log creation = 1 s
[2025-05-06 01:28:24] 2025-05-05 19:11:04,784 | INFO     | ..............................
[2025-05-06 01:28:24] 2025-05-05 19:11:04,904 | INFO     | 
[2025-05-06 01:28:24] 2025-05-05 19:11:04,905 | INFO     | job summary report
[2025-05-06 01:28:24] 2025-05-05 19:11:04,905 | INFO     | --------------------------------------------------
[2025-05-06 01:28:24] 2025-05-05 19:11:04,905 | INFO     | PanDA job id: 6634098561
[2025-05-06 01:28:24] 2025-05-05 19:11:04,905 | INFO     | task id: 44506063
[2025-05-06 01:28:24] 2025-05-05 19:11:04,905 | INFO     | errors: (none)
[2025-05-06 01:28:24] 2025-05-05 19:11:04,905 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-06 01:28:24] 2025-05-05 19:11:04,905 | INFO     | pilot state: finished 
[2025-05-06 01:28:24] 2025-05-05 19:11:04,905 | INFO     | transexitcode: 0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,905 | INFO     | exeerrorcode: 0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,906 | INFO     | exeerrordiag: 
[2025-05-06 01:28:24] 2025-05-05 19:11:04,906 | INFO     | exitcode: 0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,906 | INFO     | exitmsg: OK
[2025-05-06 01:28:24] 2025-05-05 19:11:04,906 | INFO     | cpuconsumptiontime: 52891 s
[2025-05-06 01:28:24] 2025-05-05 19:11:04,906 | INFO     | nevents: 400
[2025-05-06 01:28:24] 2025-05-05 19:11:04,906 | INFO     | neventsw: 0
[2025-05-06 01:28:24] 2025-05-05 19:11:04,906 | INFO     | pid: 27596
[2025-05-06 01:28:24] 2025-05-05 19:11:04,906 | INFO     | pgrp: 27596
[2025-05-06 01:28:24] 2025-05-05 19:11:04,906 | INFO     | corecount: 8
[2025-05-06 01:28:24] 2025-05-05 19:11:04,906 | INFO     | event service: False
[2025-05-06 01:28:24] 2025-05-05 19:11:04,907 | INFO     | sizes: {0: 2392906, 1: 2393763, 7: 2393969, 12: 2393997, 14269: 2423801, 14273: 2432744, 14274: 2432928, 14382: 2433098}
[2025-05-06 01:28:24] 2025-05-05 19:11:04,907 | INFO     | --------------------------------------------------
[2025-05-06 01:28:24] 2025-05-05 19:11:04,907 | INFO     | 
[2025-05-06 01:28:24] 2025-05-05 19:11:04,907 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-05-06 01:28:24] 2025-05-05 19:11:05,453 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,453 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,453 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,454 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,454 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,455 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-06 01:28:24] 2025-05-05 19:11:05,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,455 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-06 01:28:24] 2025-05-05 19:11:05,455 | INFO     | job 6634098561 has completed (purged errors)
[2025-05-06 01:28:24] 2025-05-05 19:11:05,456 | INFO     | overall cleanup function is called
[2025-05-06 01:28:24] 2025-05-05 19:11:05,525 | INFO     | PID=21179 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-06 01:28:24] 2025-05-05 19:11:05,525 | INFO     | .. there are 2 such processes running
[2025-05-06 01:28:24] 2025-05-05 19:11:06,464 | INFO     | --- collectZombieJob: --- 10, [27596]
[2025-05-06 01:28:24] 2025-05-05 19:11:06,465 | INFO     | zombie collector waiting for pid 27596
[2025-05-06 01:28:24] 2025-05-05 19:11:06,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-06 01:28:24] 2025-05-05 19:11:06,465 | INFO     | collected zombie processes
[2025-05-06 01:28:24] 2025-05-05 19:11:06,465 | INFO     | will attempt to kill all subprocesses of pid=27596
[2025-05-06 01:28:24] 2025-05-05 19:11:06,560 | INFO     | process IDs to be killed: [27596] (in reverse order)
[2025-05-06 01:28:24] 2025-05-05 19:11:07,539 | WARNING  | found no corresponding commands to process id(s)
[2025-05-06 01:28:24] 2025-05-05 19:11:07,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-06 01:28:24] 2025-05-05 19:11:07,541 | INFO     | did not find any defunct processes belonging to 27596
[2025-05-06 01:28:24] 2025-05-05 19:11:07,543 | INFO     | did not find any defunct processes belonging to 27596
[2025-05-06 01:28:24] 2025-05-05 19:11:07,544 | INFO     | ready for new job
[2025-05-06 01:28:24] 2025-05-05 19:11:07,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-06 01:28:24] 2025-05-05 19:11:07,545 | INFO     | **************************************
[2025-05-06 01:28:24] 2025-05-05 19:11:07,546 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-06 01:28:24] 2025-05-05 19:11:07,546 | INFO     | **************************************
[2025-05-06 01:28:24] 2025-05-05 19:11:07,546 | INFO     | 
[2025-05-06 01:28:24] 2025-05-05 19:11:07,554 | INFO     | pilot is running in a VM
[2025-05-06 01:28:24] 2025-05-05 19:11:07,554 | INFO     | architecture information:
[2025-05-06 01:28:24] 2025-05-05 19:11:07,569 | INFO     | executing command: cat /etc/os-release
[2025-05-06 01:28:24] 2025-05-05 19:11:07,855 | INFO     | cat /etc/os-release:
[2025-05-06 01:28:24] NAME="CentOS Linux"
[2025-05-06 01:28:24] VERSION="7 (Core)"
[2025-05-06 01:28:24] ID="centos"
[2025-05-06 01:28:24] ID_LIKE="rhel fedora"
[2025-05-06 01:28:24] VERSION_ID="7"
[2025-05-06 01:28:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-06 01:28:24] ANSI_COLOR="0;31"
[2025-05-06 01:28:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-06 01:28:24] HOME_URL="https://www.centos.org/"
[2025-05-06 01:28:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-06 01:28:24] 
[2025-05-06 01:28:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-06 01:28:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-06 01:28:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-06 01:28:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-06 01:28:24] 
[2025-05-06 01:28:24] 2025-05-05 19:11:07,855 | INFO     | **************************************
[2025-05-06 01:28:24] 2025-05-05 19:11:08,359 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-05-06 01:28:24] 2025-05-05 19:11:08,634 | INFO     | sufficient remaining disk space (497160290304 B)
[2025-05-06 01:28:24] 2025-05-05 19:11:08,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-06 01:28:24] 2025-05-05 19:11:08,634 | INFO     | current server update state: UPDATING_FINAL
[2025-05-06 01:28:24] 2025-05-05 19:11:08,635 | INFO     | update_server=False
[2025-05-06 01:28:24] 2025-05-05 19:11:08,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-06 01:28:24] 2025-05-05 19:11:08,641 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-06 01:28:24] 2025-05-05 19:11:08,642 | INFO     | aborting loop
[2025-05-06 01:28:24] 2025-05-05 19:11:09,059 | INFO     | all job control threads have been joined
[2025-05-06 01:28:24] 2025-05-05 19:11:09,272 | INFO     | all data control threads have been joined
[2025-05-06 01:28:24] 2025-05-05 19:11:09,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-06 01:28:24] 2025-05-05 19:11:09,540 | INFO     | found 0 job(s) in 20 queues
[2025-05-06 01:28:24] 2025-05-05 19:11:09,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-06 01:28:24] 2025-05-05 19:11:09,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-06 01:28:24] 2025-05-05 19:11:09,641 | INFO     | [job] retrieve thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:09,648 | INFO     | [job] job monitor thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:09,657 | INFO     | [data] copytool_in thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:09,678 | INFO     | [job] validate thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:09,715 | INFO     | [payload] validate_pre thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:09,802 | INFO     | all payload control threads have been joined
[2025-05-06 01:28:24] 2025-05-05 19:11:09,859 | INFO     | [job] create_data_payload thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:09,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-06 01:28:24] 2025-05-05 19:11:10,065 | INFO     | [job] control thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:10,278 | INFO     | [data] control thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:10,333 | INFO     | [payload] execute_payloads thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:10,381 | INFO     | [payload] validate_post thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:10,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-06 01:28:24] 2025-05-05 19:11:10,808 | INFO     | [payload] control thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:10,924 | INFO     | [job] queue monitor thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:11,196 | INFO     | [payload] failed_post thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:11,349 | INFO     | [data] copytool_out thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:14,438 | INFO     | [data] queue_monitor thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:16,096 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-05-06 01:28:24] 2025-05-05 19:11:19,239 | INFO     | job.realtimelogging is not enabled
[2025-05-06 01:28:24] 2025-05-05 19:11:20,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-06 01:28:24] 2025-05-05 19:11:21,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039592621888)>', '<ExcThread(monitor, started 140039365740288)>']
[2025-05-06 01:28:24] 2025-05-05 19:11:22,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-06 01:28:24] 2025-05-05 19:11:22,619 | INFO     | [monitor] control thread has ended
[2025-05-06 01:28:24] 2025-05-05 19:11:26,989 | INFO     | all workflow threads have been joined
[2025-05-06 01:28:24] 2025-05-05 19:11:26,990 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-06 01:28:24] 2025-05-05 19:11:26,990 | INFO     | traces error code: 0
[2025-05-06 01:28:24] 2025-05-05 19:11:26,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-06 01:28:24] 2025-05-05 19:11:27,212 [wrapper] ==== pilot stdout END ====
[2025-05-06 01:28:24] 2025-05-05 19:11:27,304 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-06 01:28:24] 2025-05-05 19:11:27,395 [wrapper] pilotpid: 21179
[2025-05-06 01:28:24] 2025-05-05 19:11:27,501 [wrapper] Pilot exit status: 0
[2025-05-06 01:28:24] 2025-05-05 19:11:28,074 [wrapper] pandaids: 6634098561
[2025-05-06 01:28:24] 2025-05-05 19:11:28,968 [wrapper] cleanup supervisor_pilot 20103 21180
[2025-05-06 01:28:24] 2025-05-05 19:11:29,067 [wrapper] Test setup, not cleaning
[2025-05-06 01:28:24] 2025-05-05 19:11:29,184 [wrapper] apfmon messages muted
[2025-05-06 01:28:24] 2025-05-05 19:11:29,283 [wrapper] ==== wrapper stdout END ====
[2025-05-06 01:28:24] 2025-05-05 19:11:29,408 [wrapper] ==== wrapper stderr END ====
[2025-05-06 01:28:24]  *** Error codes and diagnostics ***
[2025-05-06 01:28:24]     "exeErrorCode": 0,
[2025-05-06 01:28:24]     "exeErrorDiag": "",
[2025-05-06 01:28:24]     "pilotErrorCode": 0,
[2025-05-06 01:28:24]     "pilotErrorDiag": "",
[2025-05-06 01:28:24]  *** Listing of results directory ***
[2025-05-06 01:28:24] total 416760
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc    495897 May  5 07:49 pilot3.tar.gz
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc      5111 May  5 07:54 queuedata.json
[2025-05-06 01:28:24] -rwx------. 1 boinc boinc     37140 May  5 07:54 runpilot2-wrapper.sh
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc       100 May  5 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-06 01:28:24] -rwxr-xr-x. 1 boinc boinc      7986 May  5 17:10 run_atlas
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc       105 May  5 17:10 job.xml
[2025-05-06 01:28:24] -rw-r--r--. 2 boinc boinc 222827692 May  5 17:10 EVNT.44506061._000135.pool.root.1
[2025-05-06 01:28:24] -rw-r--r--. 2 boinc boinc     17569 May  5 17:10 start_atlas.sh
[2025-05-06 01:28:24] drwxrwx--x. 2 boinc boinc        68 May  5 17:10 shared
[2025-05-06 01:28:24] -rw-r--r--. 2 boinc boinc    508875 May  5 17:10 input.tar.gz
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc      6370 May  5 17:10 init_data.xml
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc         0 May  5 17:10 boinc_lockfile
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc      2556 May  5 17:10 pandaJob.out
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc       424 May  5 17:10 setup.sh.local
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc    995813 May  5 17:11 agis_schedconf.cvmfs.json
[2025-05-06 01:28:24] drwx------. 4 boinc boinc      4096 May  5 17:11 pilot3
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc 196797884 May  5 21:07 HITS.44506063._003344.pool.root.1
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc       530 May  5 21:08 boinc_task_state.xml
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc      1021 May  5 21:09 memory_monitor_summary.json
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc   1596741 May  5 21:09 agis_ddmendpoints.agis.ALL.json
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc    395060 May  5 21:09 log.44506063._003344.job.log.tgz.1
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc        95 May  5 21:10 pilot_heartbeat.json
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc      7690 May  5 21:11 heartbeat.json
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc      4489 May  5 21:11 pilotlog.txt
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc   1256366 May  5 21:11 log.44506063._003344.job.log.1
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc       357 May  5 21:11 output.list
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc       620 May  5 21:11 runtime_log
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc   1669120 May  5 21:11 result.tar.gz
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc     11031 May  5 21:11 runtime_log.err
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc       657 May  5 21:11 fAVMDmcx3V7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPL0LDmyRcjqn.diag
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc      8192 May  6 01:28 boinc_mmap_file
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc        28 May  6 01:28 wrapper_checkpoint.txt
[2025-05-06 01:28:24] -rw-r--r--. 1 boinc boinc     20532 May  6 01:28 stderr.txt
[2025-05-06 01:28:24] HITS file was successfully produced:
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc 196797884 May  5 21:07 shared/HITS.pool.root.1
[2025-05-06 01:28:24]  *** Contents of shared directory: ***
[2025-05-06 01:28:24] total 411948
[2025-05-06 01:28:24] -rw-r--r--. 2 boinc boinc 222827692 May  5 17:10 ATLAS.root_0
[2025-05-06 01:28:24] -rw-r--r--. 2 boinc boinc     17569 May  5 17:10 start_atlas.sh
[2025-05-06 01:28:24] -rw-r--r--. 2 boinc boinc    508875 May  5 17:10 input.tar.gz
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc 196797884 May  5 21:07 HITS.pool.root.1
[2025-05-06 01:28:24] -rw-------. 1 boinc boinc   1669120 May  5 21:11 result.tar.gz
01:28:26 (17506): run_atlas exited; CPU time 52998.812634
01:28:26 (17506): called boinc_finish(0)

</stderr_txt>
]]>

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