Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:13:02 (12635): wrapper (7.7.26015): starting
09:13:02 (12635): wrapper: running run_atlas (--nthreads 8)
[2025-05-05 09:13:02] Arguments: --nthreads 8
[2025-05-05 09:13:02] Threads: 8
[2025-05-05 09:13:02] Checking for CVMFS
[2025-05-05 09:13:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-05 09:13:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-05 09:13:06] Running cvmfs_config stat atlas.cern.ch
[2025-05-05 09:13:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-05 09:13:06] 2.11.2.0 12829 0 22940 145628 3 1 24613689 25165824 0 130560 0 0 0.000 1170 17462 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-05 09:13:06] CVMFS is ok
[2025-05-05 09:13:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-05 09:13:06] Checking for apptainer binary...
[2025-05-05 09:13:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-05 09:13:06] Running /usr/bin/apptainer --version
[2025-05-05 09:13:06] apptainer version 1.3.2-1.el7
[2025-05-05 09:13:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-05 09:13:07] cg-vwn500.simple-grid.lan
[2025-05-05 09:13:07] apptainer works
[2025-05-05 09:13:07] Set ATHENA_PROC_NUMBER=8
[2025-05-05 09:13:07] Set ATHENA_CORE_NUMBER=8
[2025-05-05 09:13:07] Starting ATLAS job with PandaID=6634095767
[2025-05-05 09:13:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-05 19:28:30]  *** The last 200 lines of the pilot log: ***
[2025-05-05 19:28:30] 2025-05-05 10:10:31,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-05 19:28:30] 2025-05-05 10:10:31,981 | INFO     | fitting pss+swap vs Time
[2025-05-05 19:28:30] 2025-05-05 10:10:31,981 | INFO     | sum of square deviations: 1577789583.0
[2025-05-05 19:28:30] 2025-05-05 10:10:31,982 | INFO     | sum of deviations: 65746724363.5
[2025-05-05 19:28:30] 2025-05-05 10:10:31,982 | INFO     | mean x: 1746434466.5
[2025-05-05 19:28:30] 2025-05-05 10:10:31,982 | INFO     | mean y: 2409260.447674419
[2025-05-05 19:28:30] 2025-05-05 10:10:31,983 | INFO     | -- intersect: -72771772243.25392
[2025-05-05 19:28:30] 2025-05-05 10:10:31,983 | INFO     | intersect: -72771772243.25392
[2025-05-05 19:28:30] 2025-05-05 10:10:31,983 | INFO     | chi2: 5.392944663014886
[2025-05-05 19:28:30] 2025-05-05 10:10:31,983 | INFO     | sum of square deviations: 1444149868.0
[2025-05-05 19:28:30] 2025-05-05 10:10:31,984 | INFO     | sum of deviations: 75097182716.0
[2025-05-05 19:28:30] 2025-05-05 10:10:31,985 | INFO     | mean x: 1746434314.0
[2025-05-05 19:28:30] 2025-05-05 10:10:31,985 | INFO     | mean y: 2419625.9640718563
[2025-05-05 19:28:30] 2025-05-05 10:10:31,985 | INFO     | -- intersect: -90813845144.10626
[2025-05-05 19:28:30] 2025-05-05 10:10:31,985 | INFO     | intersect: -90813845144.10626
[2025-05-05 19:28:30] 2025-05-05 10:10:31,985 | INFO     | chi2: 4.645192099341805
[2025-05-05 19:28:30] 2025-05-05 10:10:31,985 | INFO     | current chi2=4.645192099341805 (change=13.865385432214975 %)
[2025-05-05 19:28:30] 2025-05-05 10:10:31,985 | INFO     | right removable region: 166
[2025-05-05 19:28:30] 2025-05-05 10:10:31,986 | INFO     | sum of square deviations: 1444149868.0
[2025-05-05 19:28:30] 2025-05-05 10:10:31,987 | INFO     | sum of deviations: 23319051207.999985
[2025-05-05 19:28:30] 2025-05-05 10:10:31,987 | INFO     | mean x: 1746434619.0
[2025-05-05 19:28:30] 2025-05-05 10:10:31,991 | INFO     | mean y: 2457547.7305389224
[2025-05-05 19:28:30] 2025-05-05 10:10:31,992 | INFO     | -- intersect: -28197661577.22232
[2025-05-05 19:28:30] 2025-05-05 10:10:31,992 | INFO     | intersect: -28197661577.22232
[2025-05-05 19:28:30] 2025-05-05 10:10:31,992 | INFO     | chi2: 2.77949150790894
[2025-05-05 19:28:30] 2025-05-05 10:10:31,992 | INFO     | current chi2=2.77949150790894 (change=48.460596546245924 %)
[2025-05-05 19:28:30] 2025-05-05 10:10:31,993 | INFO     | sum of square deviations: 1318277740.5
[2025-05-05 19:28:30] 2025-05-05 10:10:31,994 | INFO     | sum of deviations: -13004242056.000002
[2025-05-05 19:28:30] 2025-05-05 10:10:31,994 | INFO     | mean x: 1746434771.5
[2025-05-05 19:28:30] 2025-05-05 10:10:31,994 | INFO     | mean y: 2501561.765432099
[2025-05-05 19:28:30] 2025-05-05 10:10:31,994 | INFO     | -- intersect: 17230328298.024467
[2025-05-05 19:28:30] 2025-05-05 10:10:31,994 | INFO     | intersect: 17230328298.024467
[2025-05-05 19:28:30] 2025-05-05 10:10:31,994 | INFO     | chi2: 1.0045781931302573
[2025-05-05 19:28:30] 2025-05-05 10:10:31,995 | INFO     | current chi2=1.0045781931302573 (change=63.85748291470698 %)
[2025-05-05 19:28:30] 2025-05-05 10:10:31,995 | INFO     | sum of square deviations: 1199940638.0
[2025-05-05 19:28:30] 2025-05-05 10:10:31,996 | INFO     | sum of deviations: -22436814186.0
[2025-05-05 19:28:30] 2025-05-05 10:10:31,996 | INFO     | mean x: 1746434924.0
[2025-05-05 19:28:30] 2025-05-05 10:10:31,996 | INFO     | mean y: 2513578.3757961784
[2025-05-05 19:28:30] 2025-05-05 10:10:31,996 | INFO     | -- intersect: 32657825547.00756
[2025-05-05 19:28:30] 2025-05-05 10:10:31,997 | INFO     | intersect: 32657825547.00756
[2025-05-05 19:28:30] 2025-05-05 10:10:31,997 | INFO     | chi2: 0.8103890816035684
[2025-05-05 19:28:30] 2025-05-05 10:10:31,997 | INFO     | current chi2=0.8103890816035684 (change=19.33041278963037 %)
[2025-05-05 19:28:30] 2025-05-05 10:10:31,997 | INFO     | left removable region: 30
[2025-05-05 19:28:30] 2025-05-05 10:10:31,997 | INFO     | sum of square deviations: 779958810.0
[2025-05-05 19:28:30] 2025-05-05 10:10:31,998 | INFO     | sum of deviations: -8619207249.5
[2025-05-05 19:28:30] 2025-05-05 10:10:31,998 | INFO     | mean x: 1746435198.5
[2025-05-05 19:28:30] 2025-05-05 10:10:31,999 | INFO     | mean y: 2524249.875
[2025-05-05 19:28:30] 2025-05-05 10:10:31,999 | INFO     | -- intersect: 19302116395.89252
[2025-05-05 19:28:30] 2025-05-05 10:10:31,999 | INFO     | intersect: 19302116395.89252
[2025-05-05 19:28:30] 2025-05-05 10:10:31,999 | INFO     | chi2: 0.01620679415877063
[2025-05-05 19:28:30] 2025-05-05 10:10:31,999 | INFO     | -- intersect: 19302116395.89252
[2025-05-05 19:28:30] 2025-05-05 10:10:31,999 | INFO     | current memory leak: -11.05 B/s (using 136 data points, chi2=0.02)
[2025-05-05 19:28:30] 2025-05-05 10:10:32,000 | INFO     | ..............................
[2025-05-05 19:28:30] 2025-05-05 10:10:32,000 | INFO     | . Timing measurements:
[2025-05-05 19:28:30] 2025-05-05 10:10:32,000 | INFO     | . get job = 0 s
[2025-05-05 19:28:30] 2025-05-05 10:10:32,000 | INFO     | . initial setup = 5 s
[2025-05-05 19:28:30] 2025-05-05 10:10:32,000 | INFO     | . payload setup = 18 s
[2025-05-05 19:28:30] 2025-05-05 10:10:32,000 | INFO     | . stage-in = 0 s
[2025-05-05 19:28:30] 2025-05-05 10:10:32,001 | INFO     | . payload execution = 10461 s
[2025-05-05 19:28:30] 2025-05-05 10:10:32,001 | INFO     | . stage-out = 3 s
[2025-05-05 19:28:30] 2025-05-05 10:10:32,001 | INFO     | . log creation = 1 s
[2025-05-05 19:28:30] 2025-05-05 10:10:32,001 | INFO     | ..............................
[2025-05-05 19:28:30] 2025-05-05 10:10:32,390 | INFO     | 
[2025-05-05 19:28:30] 2025-05-05 10:10:32,391 | INFO     | job summary report
[2025-05-05 19:28:30] 2025-05-05 10:10:32,391 | INFO     | --------------------------------------------------
[2025-05-05 19:28:30] 2025-05-05 10:10:32,391 | INFO     | PanDA job id: 6634095767
[2025-05-05 19:28:30] 2025-05-05 10:10:32,391 | INFO     | task id: 44506063
[2025-05-05 19:28:30] 2025-05-05 10:10:32,391 | INFO     | errors: (none)
[2025-05-05 19:28:30] 2025-05-05 10:10:32,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-05 19:28:30] 2025-05-05 10:10:32,391 | INFO     | pilot state: finished 
[2025-05-05 19:28:30] 2025-05-05 10:10:32,391 | INFO     | transexitcode: 0
[2025-05-05 19:28:30] 2025-05-05 10:10:32,391 | INFO     | exeerrorcode: 0
[2025-05-05 19:28:30] 2025-05-05 10:10:32,392 | INFO     | exeerrordiag: 
[2025-05-05 19:28:30] 2025-05-05 10:10:32,392 | INFO     | exitcode: 0
[2025-05-05 19:28:30] 2025-05-05 10:10:32,392 | INFO     | exitmsg: OK
[2025-05-05 19:28:30] 2025-05-05 10:10:32,392 | INFO     | cpuconsumptiontime: 57116 s
[2025-05-05 19:28:30] 2025-05-05 10:10:32,392 | INFO     | nevents: 400
[2025-05-05 19:28:30] 2025-05-05 10:10:32,392 | INFO     | neventsw: 0
[2025-05-05 19:28:30] 2025-05-05 10:10:32,392 | INFO     | pid: 23233
[2025-05-05 19:28:30] 2025-05-05 10:10:32,392 | INFO     | pgrp: 23233
[2025-05-05 19:28:30] 2025-05-05 10:10:32,392 | INFO     | corecount: 8
[2025-05-05 19:28:30] 2025-05-05 10:10:32,392 | INFO     | event service: False
[2025-05-05 19:28:30] 2025-05-05 10:10:32,393 | INFO     | sizes: {0: 2393734, 3: 2393940, 11: 2393968, 10484: 2422203, 10488: 2431144, 10489: 2431200, 10603: 2431526}
[2025-05-05 19:28:30] 2025-05-05 10:10:32,393 | INFO     | --------------------------------------------------
[2025-05-05 19:28:30] 2025-05-05 10:10:32,393 | INFO     | 
[2025-05-05 19:28:30] 2025-05-05 10:10:32,393 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-05-05 19:28:30] 2025-05-05 10:10:33,007 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,007 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,008 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,009 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-05 19:28:30] 2025-05-05 10:10:33,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,009 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-05 19:28:30] 2025-05-05 10:10:33,009 | INFO     | job 6634095767 has completed (purged errors)
[2025-05-05 19:28:30] 2025-05-05 10:10:33,010 | INFO     | overall cleanup function is called
[2025-05-05 19:28:30] 2025-05-05 10:10:34,018 | INFO     | --- collectZombieJob: --- 10, [23233]
[2025-05-05 19:28:30] 2025-05-05 10:10:34,018 | INFO     | zombie collector waiting for pid 23233
[2025-05-05 19:28:30] 2025-05-05 10:10:34,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-05 19:28:30] 2025-05-05 10:10:34,019 | INFO     | collected zombie processes
[2025-05-05 19:28:30] 2025-05-05 10:10:34,019 | INFO     | will attempt to kill all subprocesses of pid=23233
[2025-05-05 19:28:30] 2025-05-05 10:10:34,092 | INFO     | process IDs to be killed: [23233] (in reverse order)
[2025-05-05 19:28:30] 2025-05-05 10:10:34,248 | INFO     | PID=16811 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-05 19:28:30] 2025-05-05 10:10:34,248 | INFO     | .. there are 2 such processes running
[2025-05-05 19:28:30] 2025-05-05 10:10:35,198 | WARNING  | found no corresponding commands to process id(s)
[2025-05-05 19:28:30] 2025-05-05 10:10:35,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-05 19:28:30] 2025-05-05 10:10:35,200 | INFO     | did not find any defunct processes belonging to 23233
[2025-05-05 19:28:30] 2025-05-05 10:10:35,201 | INFO     | did not find any defunct processes belonging to 23233
[2025-05-05 19:28:30] 2025-05-05 10:10:35,202 | INFO     | ready for new job
[2025-05-05 19:28:30] 2025-05-05 10:10:35,202 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-05 19:28:30] 2025-05-05 10:10:35,203 | INFO     | **************************************
[2025-05-05 19:28:30] 2025-05-05 10:10:35,203 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-05 19:28:30] 2025-05-05 10:10:35,203 | INFO     | **************************************
[2025-05-05 19:28:30] 2025-05-05 10:10:35,203 | INFO     | 
[2025-05-05 19:28:30] 2025-05-05 10:10:35,204 | INFO     | pilot is running in a VM
[2025-05-05 19:28:30] 2025-05-05 10:10:35,204 | INFO     | architecture information:
[2025-05-05 19:28:30] 2025-05-05 10:10:35,219 | INFO     | executing command: cat /etc/os-release
[2025-05-05 19:28:30] 2025-05-05 10:10:35,557 | INFO     | cat /etc/os-release:
[2025-05-05 19:28:30] NAME="CentOS Linux"
[2025-05-05 19:28:30] VERSION="7 (Core)"
[2025-05-05 19:28:30] ID="centos"
[2025-05-05 19:28:30] ID_LIKE="rhel fedora"
[2025-05-05 19:28:30] VERSION_ID="7"
[2025-05-05 19:28:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-05 19:28:30] ANSI_COLOR="0;31"
[2025-05-05 19:28:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-05 19:28:30] HOME_URL="https://www.centos.org/"
[2025-05-05 19:28:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-05 19:28:30] 
[2025-05-05 19:28:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-05 19:28:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-05 19:28:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-05 19:28:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-05 19:28:30] 
[2025-05-05 19:28:30] 2025-05-05 10:10:35,557 | INFO     | **************************************
[2025-05-05 19:28:30] 2025-05-05 10:10:36,060 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-05-05 19:28:30] 2025-05-05 10:10:36,273 | INFO     | sufficient remaining disk space (497328062464 B)
[2025-05-05 19:28:30] 2025-05-05 10:10:36,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-05 19:28:30] 2025-05-05 10:10:36,273 | INFO     | current server update state: UPDATING_FINAL
[2025-05-05 19:28:30] 2025-05-05 10:10:36,273 | INFO     | update_server=False
[2025-05-05 19:28:30] 2025-05-05 10:10:36,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-05 19:28:30] 2025-05-05 10:10:36,274 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-05 19:28:30] 2025-05-05 10:10:36,275 | INFO     | found 0 job(s) in 20 queues
[2025-05-05 19:28:30] 2025-05-05 10:10:36,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-05 19:28:30] 2025-05-05 10:10:36,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-05 19:28:30] 2025-05-05 10:10:36,306 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-05 19:28:30] 2025-05-05 10:10:36,307 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-05 19:28:30] 2025-05-05 10:10:36,307 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-05 19:28:30] 2025-05-05 10:10:36,307 | INFO     | will abort loop
[2025-05-05 19:28:30] 2025-05-05 10:10:36,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-05 19:28:30] 2025-05-05 10:10:36,663 | INFO     | all data control threads have been joined
[2025-05-05 19:28:30] 2025-05-05 10:10:37,147 | INFO     | all payload control threads have been joined
[2025-05-05 19:28:30] 2025-05-05 10:10:37,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-05 19:28:30] 2025-05-05 10:10:37,279 | INFO     | [job] retrieve thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:37,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:37,312 | INFO     | [job] job monitor thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:37,472 | INFO     | [payload] validate_post thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:37,669 | INFO     | [data] control thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:37,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-05 19:28:30] 2025-05-05 10:10:37,799 | INFO     | [data] copytool_in thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:37,908 | INFO     | all job control threads have been joined
[2025-05-05 19:28:30] 2025-05-05 10:10:38,153 | INFO     | [payload] control thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:38,202 | INFO     | [job] queue monitor thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:38,206 | INFO     | [payload] validate_pre thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:38,215 | INFO     | [job] validate thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:38,230 | INFO     | [payload] failed_post thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:38,241 | INFO     | [job] create_data_payload thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:38,567 | INFO     | [payload] execute_payloads thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:38,914 | INFO     | [job] control thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:39,694 | INFO     | [data] copytool_out thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:40,519 | INFO     | [data] queue_monitor thread has finished
[2025-05-05 19:28:30] 2025-05-05 10:10:42,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067888772928)>', '<ExcThread(monitor, started 140066861082368)>']
[2025-05-05 19:28:30] 2025-05-05 10:10:43,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-05 19:28:30] 2025-05-05 10:10:43,318 | INFO     | [monitor] control thread has ended
[2025-05-05 19:28:30] 2025-05-05 10:10:47,627 | INFO     | all workflow threads have been joined
[2025-05-05 19:28:30] 2025-05-05 10:10:47,628 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-05 19:28:30] 2025-05-05 10:10:47,628 | INFO     | traces error code: 0
[2025-05-05 19:28:30] 2025-05-05 10:10:47,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-05 19:28:30] 2025-05-05 10:10:47,983 [wrapper] ==== pilot stdout END ====
[2025-05-05 19:28:30] 2025-05-05 10:10:48,084 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-05 19:28:30] 2025-05-05 10:10:48,184 [wrapper] pilotpid: 16811
[2025-05-05 19:28:30] 2025-05-05 10:10:48,290 [wrapper] Pilot exit status: 0
[2025-05-05 19:28:30] 2025-05-05 10:10:48,782 [wrapper] pandaids: 6634095767
[2025-05-05 19:28:30] 2025-05-05 10:10:49,509 [wrapper] cleanup supervisor_pilot  1550 16812
[2025-05-05 19:28:30] 2025-05-05 10:10:49,638 [wrapper] Test setup, not cleaning
[2025-05-05 19:28:30] 2025-05-05 10:10:49,775 [wrapper] apfmon messages muted
[2025-05-05 19:28:30] 2025-05-05 10:10:49,866 [wrapper] ==== wrapper stdout END ====
[2025-05-05 19:28:30] 2025-05-05 10:10:49,978 [wrapper] ==== wrapper stderr END ====
[2025-05-05 19:28:30]  *** Error codes and diagnostics ***
[2025-05-05 19:28:30]     "exeErrorCode": 0,
[2025-05-05 19:28:30]     "exeErrorDiag": "",
[2025-05-05 19:28:30]     "pilotErrorCode": 0,
[2025-05-05 19:28:30]     "pilotErrorDiag": "",
[2025-05-05 19:28:30]  *** Listing of results directory ***
[2025-05-05 19:28:30] total 423976
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc    495897 May  5 07:49 pilot3.tar.gz
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc      5111 May  5 07:52 queuedata.json
[2025-05-05 19:28:30] -rwx------. 1 boinc boinc     37140 May  5 07:52 runpilot2-wrapper.sh
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc       100 May  5 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-05 19:28:30] -rwxr-xr-x. 1 boinc boinc      7986 May  5 09:13 run_atlas
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc       105 May  5 09:13 job.xml
[2025-05-05 19:28:30] -rw-r--r--. 2 boinc boinc     17569 May  5 09:13 start_atlas.sh
[2025-05-05 19:28:30] drwxrwx--x. 2 boinc boinc        68 May  5 09:13 shared
[2025-05-05 19:28:30] -rw-r--r--. 2 boinc boinc    508867 May  5 09:13 input.tar.gz
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc      6368 May  5 09:13 init_data.xml
[2025-05-05 19:28:30] -rw-r--r--. 2 boinc boinc 225025208 May  5 09:13 EVNT.44506061._000116.pool.root.1
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc         0 May  5 09:13 boinc_lockfile
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc      2556 May  5 09:13 pandaJob.out
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc       424 May  5 09:13 setup.sh.local
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc    990395 May  5 09:13 agis_schedconf.cvmfs.json
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc   1596726 May  5 09:13 agis_ddmendpoints.agis.ALL.json
[2025-05-05 19:28:30] drwx------. 4 boinc boinc      4096 May  5 09:13 pilot3
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc 202762219 May  5 12:07 HITS.44506063._002863.pool.root.1
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc       531 May  5 12:07 boinc_task_state.xml
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc      1018 May  5 12:08 memory_monitor_summary.json
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc    351718 May  5 12:08 log.44506063._002863.job.log.tgz.1
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc        95 May  5 12:10 pilot_heartbeat.json
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc      7691 May  5 12:10 heartbeat.json
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc      4725 May  5 12:10 pilotlog.txt
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc    918787 May  5 12:10 log.44506063._002863.job.log.1
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc       357 May  5 12:10 output.list
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc       620 May  5 12:10 runtime_log
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc   1290240 May  5 12:10 result.tar.gz
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc     11013 May  5 12:10 runtime_log.err
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc       657 May  5 12:10 QrULDmsv3V7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5G0LDmGXLTSm.diag
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc      8192 May  5 19:28 boinc_mmap_file
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc        28 May  5 19:28 wrapper_checkpoint.txt
[2025-05-05 19:28:30] -rw-r--r--. 1 boinc boinc     20560 May  5 19:28 stderr.txt
[2025-05-05 19:28:30] HITS file was successfully produced:
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc 202762219 May  5 12:07 shared/HITS.pool.root.1
[2025-05-05 19:28:30]  *** Contents of shared directory: ***
[2025-05-05 19:28:30] total 419544
[2025-05-05 19:28:30] -rw-r--r--. 2 boinc boinc     17569 May  5 09:13 start_atlas.sh
[2025-05-05 19:28:30] -rw-r--r--. 2 boinc boinc    508867 May  5 09:13 input.tar.gz
[2025-05-05 19:28:30] -rw-r--r--. 2 boinc boinc 225025208 May  5 09:13 ATLAS.root_0
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc 202762219 May  5 12:07 HITS.pool.root.1
[2025-05-05 19:28:30] -rw-------. 1 boinc boinc   1290240 May  5 12:10 result.tar.gz
19:28:32 (12635): run_atlas exited; CPU time 57185.479113
19:28:32 (12635): called boinc_finish(0)

</stderr_txt>
]]>

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