Stderr output

<core_client_version>7.16.19</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-05 17:15:15 (77606): Detected: vboxwrapper 26206
2025-05-05 17:15:15 (77606): Detected: BOINC client v7.16.19
2025-05-05 17:15:15 (77606): Detected: VirtualBox VboxManage Interface (Version: 5.0.26)
2025-05-05 17:15:15 (77606): Detected: Sandbox Configuration Enabled
2025-05-05 17:15:15 (77606): Successfully copied 'init_data.xml' to the shared directory.
2025-05-05 17:15:15 (77606): Create VM. (boinc_88ad5b5a2a104e4b, slot#0)
2025-05-05 17:15:15 (77606): Setting Memory Size for VM. (4200MB)
2025-05-05 17:15:15 (77606): Setting CPU Count for VM. (2)
2025-05-05 17:15:15 (77606): Setting Chipset Options for VM.
2025-05-05 17:15:15 (77606): Setting Graphics Controller Options for VM.
2025-05-05 17:15:16 (77606): Setting Boot Options for VM.
2025-05-05 17:15:16 (77606): Setting Network Configuration for NAT.
2025-05-05 17:15:16 (77606): Enabling VM Network Access.
2025-05-05 17:15:16 (77606): Disabling USB Support for VM.
2025-05-05 17:15:16 (77606): Disabling COM Port Support for VM.
2025-05-05 17:15:16 (77606): Disabling Audio Support for VM.
2025-05-05 17:15:16 (77606): Disabling Clipboard Support for VM.
2025-05-05 17:15:16 (77606): Disabling Drag and Drop Support for VM.
2025-05-05 17:15:16 (77606): Adding storage controller(s) to VM.
2025-05-05 17:15:16 (77606): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-05 17:15:16 (77606): Adding VirtualBox Guest Additions to VM.
2025-05-05 17:15:16 (77606): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-05 17:15:16 (77606): forwarding host port 54664 to guest port 80
2025-05-05 17:15:16 (77606): Enabling remote desktop for VM.
2025-05-05 17:15:16 (77606): Required extension pack not installed, remote desktop not enabled.
2025-05-05 17:15:16 (77606): Enabling shared directory for VM.
2025-05-05 17:15:16 (77606): Starting VM using VBoxManage interface. (boinc_88ad5b5a2a104e4b, slot#0)
2025-05-05 17:15:18 (77606): Successfully started VM. (PID = '77673')
2025-05-05 17:15:18 (77606): Reporting VM Process ID to BOINC.
2025-05-05 17:15:18 (77606): Guest Log: BIOS: VirtualBox 5.0.26
2025-05-05 17:15:18 (77606): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-05 17:15:18 (77606): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-05 17:15:18 (77606): Detected: Web Application Enabled (http://localhost:54664)
2025-05-05 17:15:18 (77606): Preference change detected
2025-05-05 17:15:18 (77606): Setting CPU throttle for VM. (90%)
2025-05-05 17:15:18 (77606): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-05 17:15:20 (77606): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-05 17:15:20 (77606): Guest Log: BIOS: Booting from Hard Disk...
2025-05-05 17:15:23 (77606): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-05 17:15:23 (77606): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-05 17:15:23 (77606): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-05 17:15:29 (77606): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-05 17:15:29 (77606): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-05 17:15:39 (77606): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.000297 main     Log opened 2025-05-05T15:15:37.342313000Z
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.000436 main     OS Product: Linux
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.000490 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.000601 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.000671 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.000673 main     Process ID: 1265
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.000673 main     Package type: LINUX_64BITS_GENERIC
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.002361 main     5.2.32 r132073 started. Verbose level = 0
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.003813 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.003985 main     Session 0 is about to close ...
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.004045 main     Stopping all guest processes ...
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.004097 main     Closing all guest files ...
2025-05-05 17:15:39 (77606): Guest Log: 00:00:00.004301 main     Ended.
2025-05-05 17:15:40 (77606): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-05 17:15:40 (77606): Guest Log: [INFO] Mounting shared directory
2025-05-05 17:15:40 (77606): Guest Log: [INFO] Checking for init_data.xml
2025-05-05 17:16:06 (77606): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-05 17:16:06 (77606): Guest Log: [INFO] Detected branch: prod
2025-05-05 17:16:06 (77606): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-05 17:16:06 (77606): Guest Log: Copying input files
2025-05-05 17:16:08 (77606): Guest Log: Copied input files into RunAtlas.
2025-05-05 17:16:08 (77606): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-05 17:16:08 (77606): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-05 17:16:08 (77606): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-05 17:16:08 (77606): Guest Log: Further information can be found at the LHC@home message board.
2025-05-05 17:16:21 (77606): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-05 17:16:21 (77606): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-05 17:16:21 (77606): Guest Log: 2.6.3.0 1553 0 32152 145642 3 1 3117345 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-05 17:16:22 (77606): Guest Log: copied the webapp to /var/www
2025-05-05 17:16:22 (77606): Guest Log: ATHENA_PROC_NUMBER=2
2025-05-05 17:16:22 (77606): Guest Log: ATHENA_CORE_NUMBER=2
2025-05-05 17:16:23 (77606): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-05 17:16:23 (77606): Guest Log:  *** Starting ATLAS job. (PandaID=6634094125 taskID=44506063) ***
2025-05-05 18:54:58 (77606): Status Report: Elapsed Time: '6000.000000'
2025-05-05 18:54:58 (77606): Status Report: CPU Time: '9241.470000'
2025-05-05 20:34:38 (77606): Status Report: Elapsed Time: '12000.000000'
2025-05-05 20:34:38 (77606): Status Report: CPU Time: '19862.300000'
2025-05-05 22:14:18 (77606): Status Report: Elapsed Time: '18000.000000'
2025-05-05 22:14:18 (77606): Status Report: CPU Time: '30481.310000'
2025-05-05 23:53:58 (77606): Status Report: Elapsed Time: '24000.000000'
2025-05-05 23:53:58 (77606): Status Report: CPU Time: '41104.910000'
2025-05-06 01:33:38 (77606): Status Report: Elapsed Time: '30000.000000'
2025-05-06 01:33:38 (77606): Status Report: CPU Time: '51725.850000'
2025-05-06 02:51:32 (77606): Guest Log:  *** Job finished ***
2025-05-06 02:51:32 (77606): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:19,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:20,656 | INFO     | [job] queue monitor thread has finished
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:23,992 | INFO     | [data] queue_monitor thread has finished
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:24,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140366009722688)>', '<ExcThread(monitor, started 140365260629760)>']
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:24,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:24,859 | INFO     | [monitor] control thread has ended
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:29,783 | INFO     | all workflow threads have been joined
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:29,784 | INFO     | end of generic workflow (traces error code: 0)
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:29,785 | INFO     | traces error code: 0
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:29,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:29,914 [wrapper] ==== pilot stdout END ====
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:29,922 [wrapper] ==== wrapper stdout RESUME ====
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:29,936 [wrapper] pilotpid: 5851
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:29,948 [wrapper] Pilot exit status: 0
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:30,033 [wrapper] pandaids: 6634094125
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:30,086 [wrapper] cleanup supervisor_pilot 13677 5852
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:30,094 [wrapper] Test setup, not cleaning
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:30,102 [wrapper] apfmon messages muted
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:30,110 [wrapper] ==== wrapper stdout END ====
2025-05-06 02:51:32 (77606): Guest Log: 2025-05-06 00:51:30,117 [wrapper] ==== wrapper stderr END ====
2025-05-06 02:51:32 (77606): Guest Log:  *** Error codes and diagnostics ***
2025-05-06 02:51:32 (77606): Guest Log:     "exeErrorCode": 0,
2025-05-06 02:51:32 (77606): Guest Log:     "exeErrorDiag": "",
2025-05-06 02:51:32 (77606): Guest Log:     "pilotErrorCode": 0,
2025-05-06 02:51:32 (77606): Guest Log:     "pilotErrorDiag": "",
2025-05-06 02:51:32 (77606): Guest Log:  *** Listing of results directory ***
2025-05-06 02:51:32 (77606): Guest Log: total 208724
2025-05-06 02:51:32 (77606): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May  5 05:49 pilot3.tar.gz
2025-05-06 02:51:32 (77606): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May  5 05:51 queuedata.json
2025-05-06 02:51:32 (77606): Guest Log: -rwx------. 1 atlas atlas     37140 May  5 05:51 runpilot2-wrapper.sh
2025-05-06 02:51:32 (77606): Guest Log: -rw-r--r--. 1 atlas atlas      8379 May  5 15:16 init_data.xml
2025-05-06 02:51:32 (77606): Guest Log: -rw-r-----. 1 atlas atlas    508878 May  5 15:16 input.tar.gz
2025-05-06 02:51:32 (77606): Guest Log: -rw-r-----. 1 atlas atlas     17569 May  5 15:16 start_atlas.sh
2025-05-06 02:51:32 (77606): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  5 15:16 EVNT.44506061._000091.pool.root.1 -> /data/./ATLAS.root_0
2025-05-06 02:51:32 (77606): Guest Log: -rw-r--r--. 1 atlas atlas      2555 May  5 15:16 pandaJob.out
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas       424 May  5 15:16 setup.sh.local
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas    995813 May  5 15:17 agis_schedconf.cvmfs.json
2025-05-06 02:51:32 (77606): Guest Log: drwx------. 4 atlas atlas      4096 May  5 15:17 pilot3
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas 203195375 May  6 00:50 HITS.44506063._002266.pool.root.1
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas      1027 May  6 00:50 memory_monitor_summary.json
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas   1596741 May  6 00:50 agis_ddmendpoints.agis.ALL.json
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas    473362 May  6 00:51 log.44506063._002266.job.log.tgz.1
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas        95 May  6 00:51 pilot_heartbeat.json
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas      7715 May  6 00:51 heartbeat.json
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas      4722 May  6 00:51 pilotlog.txt
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas   2902888 May  6 00:51 log.44506063._002266.job.log.1
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas       357 May  6 00:51 output.list
2025-05-06 02:51:32 (77606): Guest Log: -rw-r--r--. 1 atlas atlas       620 May  6 00:51 runtime_log
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas   3399680 May  6 00:51 result.tar.gz
2025-05-06 02:51:32 (77606): Guest Log: -rw-r--r--. 1 atlas atlas     10963 May  6 00:51 runtime_log.err
2025-05-06 02:51:32 (77606): Guest Log: -rw-------. 1 atlas atlas       667 May  6 00:51 4JPODmtu3V7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjC0LDm2NMP5n.diag
2025-05-06 02:51:32 (77606): Guest Log: Looking for outputfile HITS.44506063._002266.pool.root.1
2025-05-06 02:51:32 (77606): Guest Log: HITS file was successfully produced
2025-05-06 02:51:33 (77606): Guest Log: -rw-------. 1 atlas atlas 203195375 May  6 00:50 /home/atlas/RunAtlas/HITS.44506063._002266.pool.root.1
2025-05-06 02:51:33 (77606): Guest Log: Successfully finished the ATLAS job!
2025-05-06 02:51:33 (77606): Guest Log: Copying the results back to the shared directory!
2025-05-06 02:51:33 (77606): Guest Log:  *** Contents of shared directory: ***
2025-05-06 02:51:33 (77606): Guest Log: total 224352
2025-05-06 02:51:33 (77606): Guest Log: -rw-rw----. 1 root root 225787975 May  5 15:15 ATLAS.root_0
2025-05-06 02:51:33 (77606): Guest Log: -rw-rw-r--. 1 root root      8379 May  5 15:15 init_data.xml
2025-05-06 02:51:33 (77606): Guest Log: -rw-rw----. 1 root root    508878 May  5 15:15 input.tar.gz
2025-05-06 02:51:33 (77606): Guest Log: -rw-r--r--. 1 root root   3399680 May  6 00:51 result.tar.gz
2025-05-06 02:51:33 (77606): Guest Log: -rw-rw----. 1 root root     17569 May  5 15:15 start_atlas.sh
2025-05-06 02:51:33 (77606): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-06 02:51:33 (77606): VM Completion File Detected.
2025-05-06 02:51:33 (77606): Powering off VM.
2025-05-06 02:51:33 (77606): Successfully stopped VM.
2025-05-06 02:51:33 (77606): Deregistering VM. (boinc_88ad5b5a2a104e4b, slot#0)
2025-05-06 02:51:33 (77606): Removing network bandwidth throttle group from VM.
2025-05-06 02:51:34 (77606): Removing VM from VirtualBox.
02:51:39 (77606): called boinc_finish(0)

</stderr_txt>
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