Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:43:30 (2569411): wrapper (7.7.26015): starting
14:43:30 (2569411): wrapper: running run_atlas (--nthreads 6)
[2025-05-01 14:43:30] Arguments: --nthreads 6
[2025-05-01 14:43:30] Threads: 6
[2025-05-01 14:43:30] Checking for CVMFS
[2025-05-01 14:43:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-01 14:43:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-01 14:43:30] Running cvmfs_config stat atlas.cern.ch
[2025-05-01 14:43:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-01 14:43:31] 2.11.5.0 4006773 7741 84032 145477 3 189 34781993 52428801 1536 130560 0 19172583 99.997 2376650 108 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-05-01 14:43:31] CVMFS is ok
[2025-05-01 14:43:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-01 14:43:31] Checking for apptainer binary...
[2025-05-01 14:43:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-01 14:43:31] Running /usr/bin/apptainer --version
[2025-05-01 14:43:31] apptainer version 1.3.5-1.el9
[2025-05-01 14:43:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-01 14:43:31] testio008
[2025-05-01 14:43:31] apptainer works
[2025-05-01 14:43:31] Set ATHENA_PROC_NUMBER=6
[2025-05-01 14:43:31] Set ATHENA_CORE_NUMBER=6
[2025-05-01 14:43:31] Starting ATLAS job with PandaID=6622355665
[2025-05-01 14:43:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-01 16:06:41]  *** The last 200 lines of the pilot log: ***
[2025-05-01 16:06:41]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6622355665/log.44292257._048755.job.log.tgz.1
[2025-05-01 16:06:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/82/log.44292257._048755.job.log.tgz.1
[2025-05-01 16:06:41]  workdir=None
[2025-05-01 16:06:41] ]
[2025-05-01 16:06:41] 2025-05-01 07:05:55,298 | INFO     | transferring file log.44292257._048755.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6622355665/log.44292257._048755.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-01 16:06:41] 2025-05-01 07:05:55,298 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6622355665/log.44292257._048755.job.log.tgz.1 /var/lib/boinc/slots/1/log.44292257._048755.job
[2025-05-01 16:06:41] 2025-05-01 07:05:55,319 | INFO     | adding to output.list: log.44292257._048755.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/82/log.44292257._048755.job.log.tg
[2025-05-01 16:06:41] 2025-05-01 07:05:55,320 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-01 16:06:41] 2025-05-01 07:05:55,320 | INFO     | summary of transferred files:
[2025-05-01 16:06:41] 2025-05-01 07:05:55,320 | INFO     |  -- lfn=log.44292257._048755.job.log.tgz.1, status_code=0, status=transferred
[2025-05-01 16:06:41] 2025-05-01 07:05:55,321 | INFO     | stage-out finished correctly
[2025-05-01 16:06:41] 2025-05-01 07:05:55,464 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-01 16:06:41] 2025-05-01 07:05:55,528 | INFO     | job 6622355665 has state=finished
[2025-05-01 16:06:41] 2025-05-01 07:05:55,529 | INFO     | preparing for final server update for job 6622355665 in state='finished'
[2025-05-01 16:06:41] 2025-05-01 07:05:55,529 | INFO     | this job has now completed (state=finished)
[2025-05-01 16:06:41] 2025-05-01 07:05:55,530 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-01 16:06:41] 2025-05-01 07:05:55,530 | INFO     | log transfer has been attempted: DONE
[2025-05-01 16:06:41] 2025-05-01 07:05:55,530 | INFO     | job 6622355665 has finished - writing final server update
[2025-05-01 16:06:41] 2025-05-01 07:05:55,530 | INFO     | total number of processed events: 400 (read)
[2025-05-01 16:06:41] 2025-05-01 07:05:55,532 | INFO     | executing command: lscpu
[2025-05-01 16:06:41] 2025-05-01 07:05:55,557 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-01 16:06:41] 2025-05-01 07:05:59,162 | WARNING  | process 2579797 can no longer be monitored (due to stat problems) - aborting
[2025-05-01 16:06:41] 2025-05-01 07:05:59,162 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6622355665/memory_monitor_summary.json (trf name=prmon)
[2025-05-01 16:06:41] 2025-05-01 07:05:59,163 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6622355665/memory_monitor_summary.json (trf name=prmon)
[2025-05-01 16:06:41] 2025-05-01 07:05:59,164 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2407913 B
[2025-05-01 16:06:41] 2025-05-01 07:05:59,164 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15540 B
[2025-05-01 16:06:41] 2025-05-01 07:05:59,164 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-05-01 16:06:41] 2025-05-01 07:06:04,831 | INFO     | PID=2573152 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-01 16:06:41] 2025-05-01 07:06:04,832 | INFO     | .. there are 2 such processes running
[2025-05-01 16:06:41] 2025-05-01 07:06:19,866 | INFO     | 4966s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-01 16:06:41] 2025-05-01 07:06:21,711 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-01 16:06:41] 2025-05-01 07:06:21,711 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6622355665/memory_monitor_summary.json (trf name=prmon)
[2025-05-01 16:06:41] 2025-05-01 07:06:21,718 | INFO     | extracted standard info from prmon json
[2025-05-01 16:06:41] 2025-05-01 07:06:21,718 | INFO     | extracted standard memory fields from prmon json
[2025-05-01 16:06:41] 2025-05-01 07:06:21,718 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-01 16:06:41] 2025-05-01 07:06:21,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-01 16:06:41] 2025-05-01 07:06:21,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-01 16:06:41] 2025-05-01 07:06:21,721 | INFO     | fitting pss+swap vs Time
[2025-05-01 16:06:41] 2025-05-01 07:06:21,722 | INFO     | sum of square deviations: 125630262.5
[2025-05-01 16:06:41] 2025-05-01 07:06:21,722 | INFO     | sum of deviations: 21381461787.0
[2025-05-01 16:06:41] 2025-05-01 07:06:21,722 | INFO     | mean x: 1746080765.5
[2025-05-01 16:06:41] 2025-05-01 07:06:21,722 | INFO     | mean y: 2303034.4864864866
[2025-05-01 16:06:41] 2025-05-01 07:06:21,722 | INFO     | -- intersect: -297169400833.8705
[2025-05-01 16:06:41] 2025-05-01 07:06:21,722 | INFO     | intersect: -297169400833.8705
[2025-05-01 16:06:41] 2025-05-01 07:06:21,722 | INFO     | chi2: 2.2506115820818184
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | -- intersect: -297169400833.8705
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | current memory leak: 170.19 B/s (using 74 data points, chi2=2.25)
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | ..............................
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | . Timing measurements:
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | . get job = 0 s
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | . initial setup = 4 s
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | . payload setup = 1 s
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | . stage-in = 0 s
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | . payload execution = 4918 s
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | . stage-out = 0 s
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | . log creation = 0 s
[2025-05-01 16:06:41] 2025-05-01 07:06:21,723 | INFO     | ..............................
[2025-05-01 16:06:41] 2025-05-01 07:06:21,764 | INFO     | sufficient remaining disk space (282471694336 B)
[2025-05-01 16:06:41] 2025-05-01 07:06:21,787 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-01 16:06:41] 2025-05-01 07:06:21,793 | INFO     | 
[2025-05-01 16:06:41] 2025-05-01 07:06:21,793 | INFO     | job summary report
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | --------------------------------------------------
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | PanDA job id: 6622355665
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | task id: 44292257
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | errors: (none)
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | pilot state: finished 
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | transexitcode: 0
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | exeerrorcode: 0
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | exeerrordiag: 
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | exitcode: 0
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | exitmsg: OK
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | cpuconsumptiontime: 23491 s
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | nevents: 400
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | neventsw: 0
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | pid: 2579797
[2025-05-01 16:06:41] 2025-05-01 07:06:21,794 | INFO     | pgrp: 2579797
[2025-05-01 16:06:41] 2025-05-01 07:06:21,795 | INFO     | corecount: 6
[2025-05-01 16:06:41] 2025-05-01 07:06:21,795 | INFO     | event service: False
[2025-05-01 16:06:41] 2025-05-01 07:06:21,795 | INFO     | sizes: {0: 2393679, 2: 2393885, 11: 2393913, 4924: 2420089, 4925: 2429086, 4952: 2429200}
[2025-05-01 16:06:41] 2025-05-01 07:06:21,795 | INFO     | --------------------------------------------------
[2025-05-01 16:06:41] 2025-05-01 07:06:21,795 | INFO     | 
[2025-05-01 16:06:41] 2025-05-01 07:06:21,795 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-05-01 16:06:41] 2025-05-01 07:06:21,805 | INFO     | size of work directory /var/lib/boinc/slots/1/PanDA_Pilot-6622355665: 2704974 B (within 2537553920 B limit)
[2025-05-01 16:06:41] 2025-05-01 07:06:21,807 | INFO     | pfn file=/var/lib/boinc/slots/1/PanDA_Pilot-6622355665/HITS.44292257._048755.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-01 16:06:41] 2025-05-01 07:06:21,807 | INFO     | total size of present files: 0 B (workdir size: 2704974 B)
[2025-05-01 16:06:41] 2025-05-01 07:06:21,808 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/1/PanDA_Pilot-6622355665/HITS.44292257._048755.pool.root.1 since it does not exist
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-01 16:06:41] 2025-05-01 07:06:21,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,822 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-01 16:06:41] 2025-05-01 07:06:21,822 | INFO     | job 6622355665 has completed (purged errors)
[2025-05-01 16:06:41] 2025-05-01 07:06:21,822 | INFO     | overall cleanup function is called
[2025-05-01 16:06:41] 2025-05-01 07:06:21,874 | INFO     | number of running child processes to parent process 2579797: 1
[2025-05-01 16:06:41] 2025-05-01 07:06:21,874 | INFO     | maximum number of monitored processes: 6
[2025-05-01 16:06:41] 2025-05-01 07:06:21,874 | INFO     | aborting job monitoring since job object (job id=6622355665) has expired
[2025-05-01 16:06:41] 2025-05-01 07:06:22,830 | INFO     | --- collectZombieJob: --- 10, [2579797]
[2025-05-01 16:06:41] 2025-05-01 07:06:22,830 | INFO     | zombie collector waiting for pid 2579797
[2025-05-01 16:06:41] 2025-05-01 07:06:22,830 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-01 16:06:41] 2025-05-01 07:06:22,830 | INFO     | collected zombie processes
[2025-05-01 16:06:41] 2025-05-01 07:06:22,830 | INFO     | will attempt to kill all subprocesses of pid=2579797
[2025-05-01 16:06:41] 2025-05-01 07:06:22,868 | INFO     | process IDs to be killed: [2579797] (in reverse order)
[2025-05-01 16:06:41] 2025-05-01 07:06:22,909 | WARNING  | found no corresponding commands to process id(s)
[2025-05-01 16:06:41] 2025-05-01 07:06:22,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-01 16:06:41] 2025-05-01 07:06:22,915 | INFO     | did not find any defunct processes belonging to 2579797
[2025-05-01 16:06:41] 2025-05-01 07:06:22,919 | INFO     | did not find any defunct processes belonging to 2579797
[2025-05-01 16:06:41] 2025-05-01 07:06:22,920 | INFO     | ready for new job
[2025-05-01 16:06:41] 2025-05-01 07:06:22,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-01 16:06:41] 2025-05-01 07:06:22,922 | INFO     | **************************************
[2025-05-01 16:06:41] 2025-05-01 07:06:22,922 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-01 16:06:41] 2025-05-01 07:06:22,922 | INFO     | **************************************
[2025-05-01 16:06:41] 2025-05-01 07:06:22,922 | INFO     | 
[2025-05-01 16:06:41] 2025-05-01 07:06:22,923 | INFO     | architecture information:
[2025-05-01 16:06:41] 2025-05-01 07:06:22,923 | INFO     | executing command: cat /etc/os-release
[2025-05-01 16:06:41] 2025-05-01 07:06:22,942 | INFO     | cat /etc/os-release:
[2025-05-01 16:06:41] NAME="CentOS Linux"
[2025-05-01 16:06:41] VERSION="7 (Core)"
[2025-05-01 16:06:41] ID="centos"
[2025-05-01 16:06:41] ID_LIKE="rhel fedora"
[2025-05-01 16:06:41] VERSION_ID="7"
[2025-05-01 16:06:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-01 16:06:41] ANSI_COLOR="0;31"
[2025-05-01 16:06:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-01 16:06:41] HOME_URL="https://www.centos.org/"
[2025-05-01 16:06:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-01 16:06:41] 
[2025-05-01 16:06:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-01 16:06:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-01 16:06:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-01 16:06:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-01 16:06:41] 
[2025-05-01 16:06:41] 2025-05-01 07:06:22,942 | INFO     | **************************************
[2025-05-01 16:06:41] 2025-05-01 07:06:23,446 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-05-01 16:06:41] 2025-05-01 07:06:23,466 | INFO     | sufficient remaining disk space (282475888640 B)
[2025-05-01 16:06:41] 2025-05-01 07:06:23,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-01 16:06:41] 2025-05-01 07:06:23,467 | INFO     | current server update state: UPDATING_FINAL
[2025-05-01 16:06:41] 2025-05-01 07:06:23,467 | INFO     | update_server=False
[2025-05-01 16:06:41] 2025-05-01 07:06:23,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-01 16:06:41] 2025-05-01 07:06:23,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-01 16:06:41] 2025-05-01 07:06:23,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-01 16:06:41] 2025-05-01 07:06:23,468 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-01 16:06:41] 2025-05-01 07:06:23,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-01 16:06:41] 2025-05-01 07:06:23,468 | INFO     | aborting loop
[2025-05-01 16:06:41] 2025-05-01 07:06:23,468 | INFO     | found 0 job(s) in 20 queues
[2025-05-01 16:06:41] 2025-05-01 07:06:23,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-01 16:06:41] 2025-05-01 07:06:23,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-01 16:06:41] 2025-05-01 07:06:23,590 | INFO     | all payload control threads have been joined
[2025-05-01 16:06:41] 2025-05-01 07:06:23,895 | INFO     | all data control threads have been joined
[2025-05-01 16:06:41] 2025-05-01 07:06:24,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-01 16:06:41] 2025-05-01 07:06:24,473 | INFO     | [job] retrieve thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:24,473 | INFO     | [job] queue monitor thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:24,473 | INFO     | [job] job monitor thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:24,596 | INFO     | [payload] control thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:24,672 | INFO     | all job control threads have been joined
[2025-05-01 16:06:41] 2025-05-01 07:06:24,901 | INFO     | [data] control thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:25,026 | INFO     | [payload] failed_post thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:25,037 | INFO     | [payload] execute_payloads thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:25,287 | INFO     | [job] validate thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:25,301 | INFO     | [data] copytool_in thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:25,473 | INFO     | [data] copytool_out thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:25,493 | INFO     | [job] create_data_payload thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:25,631 | INFO     | [payload] validate_pre thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:25,677 | INFO     | [job] control thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:25,967 | INFO     | [payload] validate_post thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:28,057 | INFO     | [data] queue_monitor thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:34,074 | INFO     | job.realtimelogging is not enabled
[2025-05-01 16:06:41] 2025-05-01 07:06:35,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-01 16:06:41] 2025-05-01 07:06:36,060 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153416755008)>', '<ExcThread(monitor, started 140152567494400)>']
[2025-05-01 16:06:41] 2025-05-01 07:06:36,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-01 16:06:41] 2025-05-01 07:06:36,534 | INFO     | [monitor] control thread has ended
[2025-05-01 16:06:41] 2025-05-01 07:06:41,085 | INFO     | all workflow threads have been joined
[2025-05-01 16:06:41] 2025-05-01 07:06:41,086 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-01 16:06:41] 2025-05-01 07:06:41,086 | INFO     | traces error code: 0
[2025-05-01 16:06:41] 2025-05-01 07:06:41,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-01 16:06:41] 2025-05-01 07:06:41,312 [wrapper] ==== pilot stdout END ====
[2025-05-01 16:06:41] 2025-05-01 07:06:41,317 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-01 16:06:41] 2025-05-01 07:06:41,320 [wrapper] pilotpid: 2573152
[2025-05-01 16:06:41] 2025-05-01 07:06:41,323 [wrapper] Pilot exit status: 0
[2025-05-01 16:06:41] 2025-05-01 07:06:41,331 [wrapper] pandaids: 6622355665
[2025-05-01 16:06:41] 2025-05-01 07:06:41,357 [wrapper] cleanup supervisor_pilot 2600748 2573153
[2025-05-01 16:06:41] 2025-05-01 07:06:41,361 [wrapper] Test setup, not cleaning
[2025-05-01 16:06:41] 2025-05-01 07:06:41,363 [wrapper] apfmon messages muted
[2025-05-01 16:06:41] 2025-05-01 07:06:41,367 [wrapper] ==== wrapper stdout END ====
[2025-05-01 16:06:41] 2025-05-01 07:06:41,369 [wrapper] ==== wrapper stderr END ====
[2025-05-01 16:06:41]  *** Error codes and diagnostics ***
[2025-05-01 16:06:41]     "exeErrorCode": 0,
[2025-05-01 16:06:41]     "exeErrorDiag": "",
[2025-05-01 16:06:41]     "pilotErrorCode": 0,
[2025-05-01 16:06:41]     "pilotErrorDiag": "",
[2025-05-01 16:06:41]  *** Listing of results directory ***
[2025-05-01 16:06:41] total 418276
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc    495897 May  1 02:17 pilot3.tar.gz
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc      5111 May  1 02:27 queuedata.json
[2025-05-01 16:06:41] -rwx------. 1 boinc boinc     37140 May  1 02:29 runpilot2-wrapper.sh
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc       100 May  1 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-01 16:06:41] -rwxr-xr-x. 1 boinc boinc      7986 May  1 14:43 run_atlas
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc       105 May  1 14:43 job.xml
[2025-05-01 16:06:41] -rw-r--r--. 2 boinc boinc     17569 May  1 14:43 start_atlas.sh
[2025-05-01 16:06:41] drwxrwx--x. 2 boinc boinc        68 May  1 14:43 shared
[2025-05-01 16:06:41] -rw-r--r--. 2 boinc boinc    508890 May  1 14:43 input.tar.gz
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc      9510 May  1 14:43 init_data.xml
[2025-05-01 16:06:41] -rw-r--r--. 2 boinc boinc 226264627 May  1 14:43 EVNT.44292255._002906.pool.root.1
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc         0 May  1 14:43 boinc_lockfile
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc      2550 May  1 14:43 pandaJob.out
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc       424 May  1 14:43 setup.sh.local
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc    995343 May  1 14:43 agis_schedconf.cvmfs.json
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc   1596659 May  1 14:43 agis_ddmendpoints.agis.ALL.json
[2025-05-01 16:06:41] drwx------. 4 boinc boinc      4096 May  1 14:43 pilot3
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc 196714211 May  1 16:05 HITS.44292257._048755.pool.root.1
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc       529 May  1 16:05 boinc_task_state.xml
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc      1015 May  1 16:05 memory_monitor_summary.json
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc    260026 May  1 16:05 log.44292257._048755.job.log.tgz.1
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc      8192 May  1 16:06 boinc_mmap_file
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc        27 May  1 16:06 wrapper_checkpoint.txt
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc        95 May  1 16:06 pilot_heartbeat.json
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc      7659 May  1 16:06 heartbeat.json
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc      4549 May  1 16:06 pilotlog.txt
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc    488154 May  1 16:06 log.44292257._048755.job.log.1
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc       357 May  1 16:06 output.list
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc       620 May  1 16:06 runtime_log
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc    768000 May  1 16:06 result.tar.gz
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc       641 May  1 16:06 XmJKDmnQQU7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmBFzLDmf9RYZm.diag
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc     10971 May  1 16:06 runtime_log.err
[2025-05-01 16:06:41] -rw-r--r--. 1 boinc boinc     22237 May  1 16:06 stderr.txt
[2025-05-01 16:06:41] HITS file was successfully produced:
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc 196714211 May  1 16:05 shared/HITS.pool.root.1
[2025-05-01 16:06:41]  *** Contents of shared directory: ***
[2025-05-01 16:06:41] total 414340
[2025-05-01 16:06:41] -rw-r--r--. 2 boinc boinc     17569 May  1 14:43 start_atlas.sh
[2025-05-01 16:06:41] -rw-r--r--. 2 boinc boinc    508890 May  1 14:43 input.tar.gz
[2025-05-01 16:06:41] -rw-r--r--. 2 boinc boinc 226264627 May  1 14:43 ATLAS.root_0
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc 196714211 May  1 16:05 HITS.pool.root.1
[2025-05-01 16:06:41] -rw-------. 1 boinc boinc    768000 May  1 16:06 result.tar.gz
16:06:42 (2569411): run_atlas exited; CPU time 23527.771205
16:06:42 (2569411): called boinc_finish(0)

</stderr_txt>
]]>

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