Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:16:59 (3542721): wrapper (7.7.26015): starting
15:16:59 (3542721): wrapper: running run_atlas (--nthreads 6)
[2025-04-30 15:16:59] Arguments: --nthreads 6
[2025-04-30 15:16:59] Threads: 6
[2025-04-30 15:16:59] Checking for CVMFS
[2025-04-30 15:16:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-30 15:16:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-30 15:16:59] Running cvmfs_config stat atlas.cern.ch
[2025-04-30 15:16:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-30 15:16:59] 2.12.7.0 3791554 109866 60508 145453 0 55 2878304 4097025 0 130560 0 5891767 99.824 9545088 33210 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2025-04-30 15:16:59] CVMFS is ok
[2025-04-30 15:16:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-30 15:16:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-30 15:16:59] Further information can be found at the LHC@home message board.
[2025-04-30 15:16:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-30 15:16:59] Checking for apptainer binary...
[2025-04-30 15:16:59] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-04-30 15:16:59] apptainer is not installed, using version from CVMFS
[2025-04-30 15:16:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-30 15:17:00] pckeatlas08
[2025-04-30 15:17:00] apptainer works
[2025-04-30 15:17:00] Set ATHENA_PROC_NUMBER=6
[2025-04-30 15:17:00] Set ATHENA_CORE_NUMBER=6
[2025-04-30 15:17:00] Starting ATLAS job with PandaID=6621684956
[2025-04-30 15:17:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-30 16:25:51]  *** The last 200 lines of the pilot log: ***
[2025-04-30 16:25:51]  is_altstaged=None
[2025-04-30 16:25:51]  is_tar=False
[2025-04-30 16:25:51]  lfn=log.44292257._041994.job.log.tgz.1
[2025-04-30 16:25:51]  mtime=0
[2025-04-30 16:25:51]  protocol_id=None
[2025-04-30 16:25:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-30 16:25:51]  replicas=None
[2025-04-30 16:25:51]  scope=mc23_13p6TeV
[2025-04-30 16:25:51]  status=None
[2025-04-30 16:25:51]  status_code=0
[2025-04-30 16:25:51]  storage_token=
[2025-04-30 16:25:51]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6621684956/log.44292257._041994.job.log.tgz.1
[2025-04-30 16:25:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/a1/log.44292257._041994.job.log.tgz.1
[2025-04-30 16:25:51]  workdir=None
[2025-04-30 16:25:51] ]
[2025-04-30 16:25:51] 2025-04-30 14:25:29,376 | INFO     | transferring file log.44292257._041994.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6621684956/log.44292257._041994.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-30 16:25:51] 2025-04-30 14:25:29,376 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6621684956/log.44292257._041994.job.log.tgz.1 /var/lib/boinc/slots/0/log.44292257._041994.job
[2025-04-30 16:25:51] 2025-04-30 14:25:29,383 | INFO     | adding to output.list: log.44292257._041994.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/a1/log.44292257._041994.job.log.tg
[2025-04-30 16:25:51] 2025-04-30 14:25:29,384 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-30 16:25:51] 2025-04-30 14:25:29,384 | INFO     | summary of transferred files:
[2025-04-30 16:25:51] 2025-04-30 14:25:29,384 | INFO     |  -- lfn=log.44292257._041994.job.log.tgz.1, status_code=0, status=transferred
[2025-04-30 16:25:51] 2025-04-30 14:25:29,384 | INFO     | stage-out finished correctly
[2025-04-30 16:25:51] 2025-04-30 14:25:30,336 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-30 16:25:51] 2025-04-30 14:25:30,369 | INFO     | job 6621684956 has state=finished
[2025-04-30 16:25:51] 2025-04-30 14:25:30,369 | INFO     | preparing for final server update for job 6621684956 in state='finished'
[2025-04-30 16:25:51] 2025-04-30 14:25:30,369 | INFO     | this job has now completed (state=finished)
[2025-04-30 16:25:51] 2025-04-30 14:25:30,369 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-30 16:25:51] 2025-04-30 14:25:30,369 | INFO     | log transfer has been attempted: DONE
[2025-04-30 16:25:51] 2025-04-30 14:25:30,369 | INFO     | job 6621684956 has finished - writing final server update
[2025-04-30 16:25:51] 2025-04-30 14:25:30,369 | INFO     | total number of processed events: 400 (read)
[2025-04-30 16:25:51] 2025-04-30 14:25:30,382 | INFO     | executing command: lscpu
[2025-04-30 16:25:51] 2025-04-30 14:25:30,402 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-30 16:25:51] 2025-04-30 14:25:30,995 | WARNING  | process 3553414 can no longer be monitored (due to stat problems) - aborting
[2025-04-30 16:25:51] 2025-04-30 14:25:30,995 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6621684956/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 16:25:51] 2025-04-30 14:25:31,028 | INFO     | number of running child processes to parent process 3553414: 1
[2025-04-30 16:25:51] 2025-04-30 14:25:31,028 | INFO     | maximum number of monitored processes: 6
[2025-04-30 16:25:51] 2025-04-30 14:25:33,531 | INFO     | monitor loop #316: job 0:6621684956 is in state 'finished'
[2025-04-30 16:25:51] 2025-04-30 14:25:33,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-30 16:25:51] 2025-04-30 14:25:36,034 | INFO     | monitor loop #317: job 0:6621684956 is in state 'finished'
[2025-04-30 16:25:51] 2025-04-30 14:25:36,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-30 16:25:51] 2025-04-30 14:25:37,235 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-30 16:25:51] 2025-04-30 14:25:37,235 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6621684956/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 16:25:51] 2025-04-30 14:25:37,236 | INFO     | extracted standard info from prmon json
[2025-04-30 16:25:51] 2025-04-30 14:25:37,236 | INFO     | extracted standard memory fields from prmon json
[2025-04-30 16:25:51] 2025-04-30 14:25:37,236 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-30 16:25:51] 2025-04-30 14:25:37,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-30 16:25:51] 2025-04-30 14:25:37,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | fitting pss+swap vs Time
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | sum of square deviations: 66959395.0
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | sum of deviations: 5603092230.999999
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | mean x: 1746021154.5
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | mean y: 2666317.8666666667
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | -- intersect: -146102560080.02118
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | intersect: -146102560080.02118
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | chi2: 1.407919246748475
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | -- intersect: -146102560080.02118
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | current memory leak: 83.68 B/s (using 60 data points, chi2=1.41)
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | ..............................
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | . Timing measurements:
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | . get job = 0 s
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | . initial setup = 0 s
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | . payload setup = 5 s
[2025-04-30 16:25:51] 2025-04-30 14:25:37,237 | INFO     | . stage-in = 0 s
[2025-04-30 16:25:51] 2025-04-30 14:25:37,238 | INFO     | . payload execution = 4077 s
[2025-04-30 16:25:51] 2025-04-30 14:25:37,238 | INFO     | . stage-out = 0 s
[2025-04-30 16:25:51] 2025-04-30 14:25:37,238 | INFO     | . log creation = 0 s
[2025-04-30 16:25:51] 2025-04-30 14:25:37,238 | INFO     | ..............................
[2025-04-30 16:25:51] 2025-04-30 14:25:37,271 | INFO     | 
[2025-04-30 16:25:51] 2025-04-30 14:25:37,271 | INFO     | job summary report
[2025-04-30 16:25:51] 2025-04-30 14:25:37,271 | INFO     | --------------------------------------------------
[2025-04-30 16:25:51] 2025-04-30 14:25:37,271 | INFO     | PanDA job id: 6621684956
[2025-04-30 16:25:51] 2025-04-30 14:25:37,271 | INFO     | task id: 44292257
[2025-04-30 16:25:51] 2025-04-30 14:25:37,271 | INFO     | errors: (none)
[2025-04-30 16:25:51] 2025-04-30 14:25:37,271 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-30 16:25:51] 2025-04-30 14:25:37,271 | INFO     | pilot state: finished 
[2025-04-30 16:25:51] 2025-04-30 14:25:37,271 | INFO     | transexitcode: 0
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | exeerrorcode: 0
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | exeerrordiag: 
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | exitcode: 0
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | exitmsg: OK
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | cpuconsumptiontime: 20118 s
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | nevents: 400
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | neventsw: 0
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | pid: 3553414
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | pgrp: 3553414
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | corecount: 6
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | event service: False
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | sizes: {0: 2393499, 1: 2393754, 6: 2393960, 11: 2393988, 4086: 2419854, 4087: 2428978, 4088: 2428978, 4095: 2429148}
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | --------------------------------------------------
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | 
[2025-04-30 16:25:51] 2025-04-30 14:25:37,272 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-30 16:25:51] 2025-04-30 14:25:37,280 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | job 6621684956 has completed (purged errors)
[2025-04-30 16:25:51] 2025-04-30 14:25:37,281 | INFO     | overall cleanup function is called
[2025-04-30 16:25:51] 2025-04-30 14:25:38,287 | INFO     | --- collectZombieJob: --- 10, [3553414]
[2025-04-30 16:25:51] 2025-04-30 14:25:38,287 | INFO     | zombie collector waiting for pid 3553414
[2025-04-30 16:25:51] 2025-04-30 14:25:38,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-30 16:25:51] 2025-04-30 14:25:38,288 | INFO     | collected zombie processes
[2025-04-30 16:25:51] 2025-04-30 14:25:38,288 | INFO     | will attempt to kill all subprocesses of pid=3553414
[2025-04-30 16:25:51] 2025-04-30 14:25:38,327 | INFO     | process IDs to be killed: [3553414] (in reverse order)
[2025-04-30 16:25:51] 2025-04-30 14:25:38,346 | WARNING  | found no corresponding commands to process id(s)
[2025-04-30 16:25:51] 2025-04-30 14:25:38,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-30 16:25:51] 2025-04-30 14:25:38,348 | INFO     | did not find any defunct processes belonging to 3553414
[2025-04-30 16:25:51] 2025-04-30 14:25:38,349 | INFO     | did not find any defunct processes belonging to 3553414
[2025-04-30 16:25:51] 2025-04-30 14:25:38,349 | INFO     | ready for new job
[2025-04-30 16:25:51] 2025-04-30 14:25:38,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-30 16:25:51] 2025-04-30 14:25:38,349 | INFO     | **************************************
[2025-04-30 16:25:51] 2025-04-30 14:25:38,350 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-30 16:25:51] 2025-04-30 14:25:38,350 | INFO     | **************************************
[2025-04-30 16:25:51] 2025-04-30 14:25:38,350 | INFO     | 
[2025-04-30 16:25:51] 2025-04-30 14:25:38,361 | INFO     | architecture information:
[2025-04-30 16:25:51] 2025-04-30 14:25:38,361 | INFO     | executing command: cat /etc/os-release
[2025-04-30 16:25:51] 2025-04-30 14:25:38,368 | INFO     | cat /etc/os-release:
[2025-04-30 16:25:51] NAME="CentOS Linux"
[2025-04-30 16:25:51] VERSION="7 (Core)"
[2025-04-30 16:25:51] ID="centos"
[2025-04-30 16:25:51] ID_LIKE="rhel fedora"
[2025-04-30 16:25:51] VERSION_ID="7"
[2025-04-30 16:25:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-30 16:25:51] ANSI_COLOR="0;31"
[2025-04-30 16:25:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-30 16:25:51] HOME_URL="https://www.centos.org/"
[2025-04-30 16:25:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-30 16:25:51] 
[2025-04-30 16:25:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-30 16:25:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-30 16:25:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-30 16:25:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-30 16:25:51] 
[2025-04-30 16:25:51] 2025-04-30 14:25:38,368 | INFO     | **************************************
[2025-04-30 16:25:51] 2025-04-30 14:25:38,871 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-30 16:25:51] 2025-04-30 14:25:38,882 | INFO     | sufficient remaining disk space (113443340288 B)
[2025-04-30 16:25:51] 2025-04-30 14:25:38,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-30 16:25:51] 2025-04-30 14:25:38,882 | INFO     | current server update state: UPDATING_FINAL
[2025-04-30 16:25:51] 2025-04-30 14:25:38,882 | INFO     | update_server=False
[2025-04-30 16:25:51] 2025-04-30 14:25:38,882 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-30 16:25:51] 2025-04-30 14:25:38,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-30 16:25:51] 2025-04-30 14:25:38,907 | INFO     | all data control threads have been joined
[2025-04-30 16:25:51] 2025-04-30 14:25:39,355 | INFO     | all job control threads have been joined
[2025-04-30 16:25:51] 2025-04-30 14:25:39,408 | INFO     | all payload control threads have been joined
[2025-04-30 16:25:51] 2025-04-30 14:25:39,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-30 16:25:51] 2025-04-30 14:25:39,543 | INFO     | aborting loop
[2025-04-30 16:25:51] 2025-04-30 14:25:39,862 | INFO     | PID=3546358 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-30 16:25:51] 2025-04-30 14:25:39,862 | INFO     | found 0 job(s) in 20 queues
[2025-04-30 16:25:51] 2025-04-30 14:25:39,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-30 16:25:51] 2025-04-30 14:25:39,862 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-30 16:25:51] 2025-04-30 14:25:39,888 | INFO     | [job] retrieve thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:39,888 | INFO     | [job] queue monitor thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:39,913 | INFO     | [data] control thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:39,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-30 16:25:51] 2025-04-30 14:25:39,956 | INFO     | [data] copytool_in thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:40,153 | INFO     | [payload] execute_payloads thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:40,361 | INFO     | [job] control thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:40,414 | INFO     | [payload] control thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:40,548 | INFO     | [job] job monitor thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:40,773 | INFO     | [payload] failed_post thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:40,800 | INFO     | [job] validate thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:40,862 | INFO     | [job] create_data_payload thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:40,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:40,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-30 16:25:51] 2025-04-30 14:25:40,943 | INFO     | [payload] validate_pre thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:41,302 | INFO     | [payload] validate_post thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:41,937 | INFO     | [data] copytool_out thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:44,886 | INFO     | [data] queue_monitor thread has finished
[2025-04-30 16:25:51] 2025-04-30 14:25:45,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662929475392)>', '<ExcThread(monitor, started 140662250923776)>']
[2025-04-30 16:25:51] 2025-04-30 14:25:46,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-30 16:25:51] 2025-04-30 14:25:46,898 | INFO     | [monitor] control thread has ended
[2025-04-30 16:25:51] 2025-04-30 14:25:50,962 | INFO     | all workflow threads have been joined
[2025-04-30 16:25:51] 2025-04-30 14:25:50,963 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-30 16:25:51] 2025-04-30 14:25:50,963 | INFO     | traces error code: 0
[2025-04-30 16:25:51] 2025-04-30 14:25:50,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-30 16:25:51] 2025-04-30 14:25:51,030 [wrapper] ==== pilot stdout END ====
[2025-04-30 16:25:51] 2025-04-30 14:25:51,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-30 16:25:51] 2025-04-30 14:25:51,033 [wrapper] pilotpid: 3546358
[2025-04-30 16:25:51] 2025-04-30 14:25:51,034 [wrapper] Pilot exit status: 0
[2025-04-30 16:25:51] 2025-04-30 14:25:51,040 [wrapper] pandaids: 6621684956
[2025-04-30 16:25:51] 2025-04-30 14:25:51,055 [wrapper] cleanup supervisor_pilot 3569316 3546359
[2025-04-30 16:25:51] 2025-04-30 14:25:51,056 [wrapper] Test setup, not cleaning
[2025-04-30 16:25:51] 2025-04-30 14:25:51,058 [wrapper] apfmon messages muted
[2025-04-30 16:25:51] 2025-04-30 14:25:51,059 [wrapper] ==== wrapper stdout END ====
[2025-04-30 16:25:51] 2025-04-30 14:25:51,061 [wrapper] ==== wrapper stderr END ====
[2025-04-30 16:25:51]  *** Error codes and diagnostics ***
[2025-04-30 16:25:51]     "exeErrorCode": 0,
[2025-04-30 16:25:51]     "exeErrorDiag": "",
[2025-04-30 16:25:51]     "pilotErrorCode": 0,
[2025-04-30 16:25:51]     "pilotErrorDiag": "",
[2025-04-30 16:25:51]  *** Listing of results directory ***
[2025-04-30 16:25:51] total 413372
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc      5111 Apr 30 05:49 queuedata.json
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc    495897 Apr 30 05:49 pilot3.tar.gz
[2025-04-30 16:25:51] -rwx------ 1 boinc boinc     37140 Apr 30 05:50 runpilot2-wrapper.sh
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc       100 Apr 30 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-30 16:25:51] -rwxr-xr-x 1 boinc boinc      7986 Apr 30 15:16 run_atlas
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc       105 Apr 30 15:16 job.xml
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc      6517 Apr 30 15:16 init_data.xml
[2025-04-30 16:25:51] -rw-r--r-- 2 boinc boinc 223586335 Apr 30 15:16 EVNT.44292255._004519.pool.root.1
[2025-04-30 16:25:51] drwxrwx--x 2 boinc boinc        68 Apr 30 15:16 shared
[2025-04-30 16:25:51] -rw-r--r-- 2 boinc boinc    508879 Apr 30 15:16 input.tar.gz
[2025-04-30 16:25:51] -rw-r--r-- 2 boinc boinc     17569 Apr 30 15:16 start_atlas.sh
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc         0 Apr 30 15:16 boinc_lockfile
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc      2548 Apr 30 15:17 pandaJob.out
[2025-04-30 16:25:51] -rw------- 1 boinc boinc       424 Apr 30 15:17 setup.sh.local
[2025-04-30 16:25:51] -rw------- 1 boinc boinc    995652 Apr 30 15:17 agis_schedconf.cvmfs.json
[2025-04-30 16:25:51] -rw------- 1 boinc boinc   1596659 Apr 30 15:17 agis_ddmendpoints.agis.ALL.json
[2025-04-30 16:25:51] drwx------ 4 boinc boinc      4096 Apr 30 15:17 pilot3
[2025-04-30 16:25:51] -rw------- 1 boinc boinc 194563681 Apr 30 16:25 HITS.44292257._041994.pool.root.1
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc       529 Apr 30 16:25 boinc_task_state.xml
[2025-04-30 16:25:51] -rw------- 1 boinc boinc      1014 Apr 30 16:25 memory_monitor_summary.json
[2025-04-30 16:25:51] -rw------- 1 boinc boinc        95 Apr 30 16:25 pilot_heartbeat.json
[2025-04-30 16:25:51] -rw------- 1 boinc boinc    249208 Apr 30 16:25 log.44292257._041994.job.log.tgz.1
[2025-04-30 16:25:51] -rw------- 1 boinc boinc      7681 Apr 30 16:25 heartbeat.json
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc      8192 Apr 30 16:25 boinc_mmap_file
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc        27 Apr 30 16:25 wrapper_checkpoint.txt
[2025-04-30 16:25:51] -rw------- 1 boinc boinc      4673 Apr 30 16:25 pilotlog.txt
[2025-04-30 16:25:51] -rw------- 1 boinc boinc    409545 Apr 30 16:25 log.44292257._041994.job.log.1
[2025-04-30 16:25:51] -rw------- 1 boinc boinc       357 Apr 30 16:25 output.list
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc       620 Apr 30 16:25 runtime_log
[2025-04-30 16:25:51] -rw------- 1 boinc boinc    675840 Apr 30 16:25 result.tar.gz
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc     11026 Apr 30 16:25 runtime_log.err
[2025-04-30 16:25:51] -rw------- 1 boinc boinc       649 Apr 30 16:25 PymKDmidDU7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmB6xLDmgUvKnm.diag
[2025-04-30 16:25:51] -rw-r--r-- 1 boinc boinc     21641 Apr 30 16:25 stderr.txt
[2025-04-30 16:25:51] HITS file was successfully produced:
[2025-04-30 16:25:51] -rw------- 1 boinc boinc 194563681 Apr 30 16:25 shared/HITS.pool.root.1
[2025-04-30 16:25:51]  *** Contents of shared directory: ***
[2025-04-30 16:25:51] total 409532
[2025-04-30 16:25:51] -rw-r--r-- 2 boinc boinc 223586335 Apr 30 15:16 ATLAS.root_0
[2025-04-30 16:25:51] -rw-r--r-- 2 boinc boinc    508879 Apr 30 15:16 input.tar.gz
[2025-04-30 16:25:51] -rw-r--r-- 2 boinc boinc     17569 Apr 30 15:16 start_atlas.sh
[2025-04-30 16:25:51] -rw------- 1 boinc boinc 194563681 Apr 30 16:25 HITS.pool.root.1
[2025-04-30 16:25:51] -rw------- 1 boinc boinc    675840 Apr 30 16:25 result.tar.gz
16:25:52 (3542721): run_atlas exited; CPU time 20136.962525
16:25:52 (3542721): called boinc_finish(0)

</stderr_txt>
]]>

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