Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:50:24 (483257): wrapper (7.7.26015): starting
04:50:24 (483257): wrapper: running run_atlas (--nthreads 4)
[2025-04-30 04:50:24] Arguments: --nthreads 4
[2025-04-30 04:50:24] Threads: 4
[2025-04-30 04:50:24] Checking for CVMFS
[2025-04-30 04:50:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-30 04:50:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-30 04:50:24] Running cvmfs_config stat atlas.cern.ch
[2025-04-30 04:50:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-30 04:50:24] 2.12.7.0 3331 303 47816 145437 0 187 8630069 10240001 1820 130560 0 1308578 99.998 190894 607 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-04-30 04:50:24] CVMFS is ok
[2025-04-30 04:50:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-30 04:50:24] Checking for apptainer binary...
[2025-04-30 04:50:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-30 04:50:24] Running /usr/bin/apptainer --version
[2025-04-30 04:50:24] apptainer version 1.3.4
[2025-04-30 04:50:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-30 04:50:24] diegovlneu
[2025-04-30 04:50:24] apptainer works
[2025-04-30 04:50:24] Set ATHENA_PROC_NUMBER=4
[2025-04-30 04:50:24] Set ATHENA_CORE_NUMBER=4
[2025-04-30 04:50:24] Starting ATLAS job with PandaID=6621014046
[2025-04-30 04:50:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-30 05:47:07]  *** The last 200 lines of the pilot log: ***
[2025-04-30 05:47:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-30 05:47:07]  is_altstaged=None
[2025-04-30 05:47:07]  is_tar=False
[2025-04-30 05:47:07]  lfn=log.44292257._037802.job.log.tgz.1
[2025-04-30 05:47:07]  mtime=0
[2025-04-30 05:47:07]  protocol_id=None
[2025-04-30 05:47:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-30 05:47:07]  replicas=None
[2025-04-30 05:47:07]  scope=mc23_13p6TeV
[2025-04-30 05:47:07]  status=None
[2025-04-30 05:47:07]  status_code=0
[2025-04-30 05:47:07]  storage_token=
[2025-04-30 05:47:07]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6621014046/log.44292257._037802.job.log.tgz.1
[2025-04-30 05:47:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/35/log.44292257._037802.job.log.tgz.1
[2025-04-30 05:47:07]  workdir=None
[2025-04-30 05:47:07] ]
[2025-04-30 05:47:07] 2025-04-30 03:46:45,733 | INFO     | transferring file log.44292257._037802.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6621014046/log.44292257._037802.job.log.tgz.1 to /var/li
[2025-04-30 05:47:07] 2025-04-30 03:46:45,733 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6621014046/log.44292257._037802.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-04-30 05:47:07] 2025-04-30 03:46:45,744 | INFO     | adding to output.list: log.44292257._037802.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/35/log.44292257._037802.job.log.tg
[2025-04-30 05:47:07] 2025-04-30 03:46:45,745 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-30 05:47:07] 2025-04-30 03:46:45,745 | INFO     | summary of transferred files:
[2025-04-30 05:47:07] 2025-04-30 03:46:45,745 | INFO     |  -- lfn=log.44292257._037802.job.log.tgz.1, status_code=0, status=transferred
[2025-04-30 05:47:07] 2025-04-30 03:46:45,745 | INFO     | stage-out finished correctly
[2025-04-30 05:47:07] 2025-04-30 03:46:45,767 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-30 05:47:07] 2025-04-30 03:46:45,787 | INFO     | job 6621014046 has state=finished
[2025-04-30 05:47:07] 2025-04-30 03:46:45,788 | INFO     | preparing for final server update for job 6621014046 in state='finished'
[2025-04-30 05:47:07] 2025-04-30 03:46:45,788 | INFO     | this job has now completed (state=finished)
[2025-04-30 05:47:07] 2025-04-30 03:46:45,788 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-30 05:47:07] 2025-04-30 03:46:45,788 | INFO     | log transfer has been attempted: DONE
[2025-04-30 05:47:07] 2025-04-30 03:46:45,788 | INFO     | job 6621014046 has finished - writing final server update
[2025-04-30 05:47:07] 2025-04-30 03:46:45,788 | INFO     | total number of processed events: 400 (read)
[2025-04-30 05:47:07] 2025-04-30 03:46:45,789 | INFO     | executing command: lscpu
[2025-04-30 05:47:07] 2025-04-30 03:46:45,802 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-30 05:47:07] 2025-04-30 03:46:48,878 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-30 05:47:07] 2025-04-30 03:46:48,879 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6621014046/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 05:47:07] 2025-04-30 03:46:48,879 | INFO     | extracted standard info from prmon json
[2025-04-30 05:47:07] 2025-04-30 03:46:48,879 | INFO     | extracted standard memory fields from prmon json
[2025-04-30 05:47:07] 2025-04-30 03:46:48,879 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-30 05:47:07] 2025-04-30 03:46:48,879 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-30 05:47:07] 2025-04-30 03:46:48,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | fitting pss+swap vs Time
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | sum of square deviations: 34277852.0
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | sum of deviations: -2101097999.5
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | mean x: 1745983187.5
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | mean y: 2461406.1875
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | -- intersect: 107024388638.29305
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | intersect: 107024388638.29305
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | chi2: 0.015260107642101554
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | -- intersect: 107024388638.29305
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | current memory leak: -61.30 B/s (using 48 data points, chi2=0.02)
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | ..............................
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | . Timing measurements:
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | . get job = 0 s
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | . initial setup = 1 s
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | . payload setup = 3 s
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | . stage-in = 0 s
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | . payload execution = 3356 s
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | . stage-out = 0 s
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | . log creation = 0 s
[2025-04-30 05:47:07] 2025-04-30 03:46:48,880 | INFO     | ..............................
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | 
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | job summary report
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | --------------------------------------------------
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | PanDA job id: 6621014046
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | task id: 44292257
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | errors: (none)
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | pilot state: finished 
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | transexitcode: 0
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | exeerrorcode: 0
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | exeerrordiag: 
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | exitcode: 0
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | exitmsg: OK
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | cpuconsumptiontime: 12297 s
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | nevents: 400
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | neventsw: 0
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | pid: 493558
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | pgrp: 493558
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | corecount: 4
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | event service: False
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | sizes: {0: 2393744, 2: 2393950, 11: 2393978, 3362: 2419603, 3363: 2428628, 3366: 2428742}
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | --------------------------------------------------
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | 
[2025-04-30 05:47:07] 2025-04-30 03:46:48,905 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-04-30 05:47:07] 2025-04-30 03:46:48,916 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,916 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | job 6621014046 has completed (purged errors)
[2025-04-30 05:47:07] 2025-04-30 03:46:48,917 | INFO     | overall cleanup function is called
[2025-04-30 05:47:07] 2025-04-30 03:46:49,923 | INFO     | --- collectZombieJob: --- 10, [493558]
[2025-04-30 05:47:07] 2025-04-30 03:46:49,923 | INFO     | zombie collector waiting for pid 493558
[2025-04-30 05:47:07] 2025-04-30 03:46:49,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-30 05:47:07] 2025-04-30 03:46:49,923 | INFO     | collected zombie processes
[2025-04-30 05:47:07] 2025-04-30 03:46:49,923 | INFO     | will attempt to kill all subprocesses of pid=493558
[2025-04-30 05:47:07] 2025-04-30 03:46:49,976 | INFO     | process IDs to be killed: [493558] (in reverse order)
[2025-04-30 05:47:07] 2025-04-30 03:46:50,008 | WARNING  | found no corresponding commands to process id(s)
[2025-04-30 05:47:07] 2025-04-30 03:46:50,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-30 05:47:07] 2025-04-30 03:46:50,010 | INFO     | did not find any defunct processes belonging to 493558
[2025-04-30 05:47:07] 2025-04-30 03:46:50,011 | INFO     | did not find any defunct processes belonging to 493558
[2025-04-30 05:47:07] 2025-04-30 03:46:50,011 | INFO     | ready for new job
[2025-04-30 05:47:07] 2025-04-30 03:46:50,012 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-30 05:47:07] 2025-04-30 03:46:50,012 | INFO     | **************************************
[2025-04-30 05:47:07] 2025-04-30 03:46:50,012 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-30 05:47:07] 2025-04-30 03:46:50,012 | INFO     | **************************************
[2025-04-30 05:47:07] 2025-04-30 03:46:50,012 | INFO     | 
[2025-04-30 05:47:07] 2025-04-30 03:46:50,013 | INFO     | pilot is running in a VM
[2025-04-30 05:47:07] 2025-04-30 03:46:50,013 | INFO     | architecture information:
[2025-04-30 05:47:07] 2025-04-30 03:46:50,013 | INFO     | executing command: cat /etc/os-release
[2025-04-30 05:47:07] 2025-04-30 03:46:50,022 | INFO     | cat /etc/os-release:
[2025-04-30 05:47:07] NAME="CentOS Linux"
[2025-04-30 05:47:07] VERSION="7 (Core)"
[2025-04-30 05:47:07] ID="centos"
[2025-04-30 05:47:07] ID_LIKE="rhel fedora"
[2025-04-30 05:47:07] VERSION_ID="7"
[2025-04-30 05:47:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-30 05:47:07] ANSI_COLOR="0;31"
[2025-04-30 05:47:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-30 05:47:07] HOME_URL="https://www.centos.org/"
[2025-04-30 05:47:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-30 05:47:07] 
[2025-04-30 05:47:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-30 05:47:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-30 05:47:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-30 05:47:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-30 05:47:07] 
[2025-04-30 05:47:07] 2025-04-30 03:46:50,023 | INFO     | **************************************
[2025-04-30 05:47:07] 2025-04-30 03:46:50,525 | INFO     | 3382s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-30 05:47:07] 2025-04-30 03:46:50,526 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-04-30 05:47:07] 2025-04-30 03:46:50,534 | INFO     | sufficient remaining disk space (28270657536 B)
[2025-04-30 05:47:07] 2025-04-30 03:46:50,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-30 05:47:07] 2025-04-30 03:46:50,535 | INFO     | current server update state: UPDATING_FINAL
[2025-04-30 05:47:07] 2025-04-30 03:46:50,535 | INFO     | update_server=False
[2025-04-30 05:47:07] 2025-04-30 03:46:50,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-30 05:47:07] 2025-04-30 03:46:50,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-30 05:47:07] 2025-04-30 03:46:50,974 | INFO     | all job control threads have been joined
[2025-04-30 05:47:07] 2025-04-30 03:46:51,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-30 05:47:07] 2025-04-30 03:46:51,311 | INFO     | all data control threads have been joined
[2025-04-30 05:47:07] 2025-04-30 03:46:51,531 | INFO     | found 0 job(s) in 20 queues
[2025-04-30 05:47:07] 2025-04-30 03:46:51,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-30 05:47:07] 2025-04-30 03:46:51,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-30 05:47:07] 2025-04-30 03:46:51,540 | INFO     | [job] queue monitor thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:51,540 | INFO     | [job] retrieve thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:51,765 | WARNING  | process 493558 can no longer be monitored (due to stat problems) - aborting
[2025-04-30 05:47:07] 2025-04-30 03:46:51,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-30 05:47:07] 2025-04-30 03:46:51,797 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 05:47:07] 2025-04-30 03:46:51,849 | INFO     | number of running child processes to parent process 493558: 1
[2025-04-30 05:47:07] 2025-04-30 03:46:51,849 | INFO     | maximum number of monitored processes: 6
[2025-04-30 05:47:07] 2025-04-30 03:46:51,849 | INFO     | aborting job monitoring since job object (job id=6621014046) has expired
[2025-04-30 05:47:07] 2025-04-30 03:46:51,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-30 05:47:07] 2025-04-30 03:46:51,849 | INFO     | will abort loop
[2025-04-30 05:47:07] 2025-04-30 03:46:51,904 | INFO     | [payload] execute_payloads thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:51,980 | INFO     | [job] control thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:52,017 | INFO     | all payload control threads have been joined
[2025-04-30 05:47:07] 2025-04-30 03:46:52,290 | INFO     | [data] copytool_in thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:52,317 | INFO     | [data] control thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:52,330 | INFO     | [payload] validate_post thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:52,855 | INFO     | [job] job monitor thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:52,861 | INFO     | [job] validate thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:52,890 | INFO     | [job] create_data_payload thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:52,926 | INFO     | [payload] failed_post thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:52,930 | INFO     | [payload] validate_pre thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:53,023 | INFO     | [payload] control thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:53,282 | INFO     | [data] copytool_out thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:46:55,801 | INFO     | [data] queue_monitor thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:47:01,101 | INFO     | job.realtimelogging is not enabled
[2025-04-30 05:47:07] 2025-04-30 03:47:02,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-30 05:47:07] 2025-04-30 03:47:02,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977720252224)>', '<ExcThread(monitor, started 139976977135360)>']
[2025-04-30 05:47:07] 2025-04-30 03:47:02,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-30 05:47:07] 2025-04-30 03:47:02,590 | INFO     | [monitor] control thread has ended
[2025-04-30 05:47:07] 2025-04-30 03:47:07,582 | INFO     | all workflow threads have been joined
[2025-04-30 05:47:07] 2025-04-30 03:47:07,582 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-30 05:47:07] 2025-04-30 03:47:07,582 | INFO     | traces error code: 0
[2025-04-30 05:47:07] 2025-04-30 03:47:07,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-30 05:47:07] 2025-04-30 03:47:07,622 [wrapper] ==== pilot stdout END ====
[2025-04-30 05:47:07] 2025-04-30 03:47:07,624 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-30 05:47:07] 2025-04-30 03:47:07,626 [wrapper] pilotpid: 486989
[2025-04-30 05:47:07] 2025-04-30 03:47:07,628 [wrapper] Pilot exit status: 0
[2025-04-30 05:47:07] 2025-04-30 03:47:07,634 [wrapper] pandaids: 6621014046
[2025-04-30 05:47:07] 2025-04-30 03:47:07,654 [wrapper] cleanup supervisor_pilot  526387 486990
[2025-04-30 05:47:07] 2025-04-30 03:47:07,656 [wrapper] Test setup, not cleaning
[2025-04-30 05:47:07] 2025-04-30 03:47:07,658 [wrapper] apfmon messages muted
[2025-04-30 05:47:07] 2025-04-30 03:47:07,661 [wrapper] ==== wrapper stdout END ====
[2025-04-30 05:47:07] 2025-04-30 03:47:07,663 [wrapper] ==== wrapper stderr END ====
[2025-04-30 05:47:07]  *** Error codes and diagnostics ***
[2025-04-30 05:47:07]     "exeErrorCode": 0,
[2025-04-30 05:47:07]     "exeErrorDiag": "",
[2025-04-30 05:47:07]     "pilotErrorCode": 0,
[2025-04-30 05:47:07]     "pilotErrorDiag": "",
[2025-04-30 05:47:07]  *** Listing of results directory ***
[2025-04-30 05:47:07] insgesamt 223004
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc    495897 Apr 29 11:59 pilot3.tar.gz
[2025-04-30 05:47:07] -rwx------ 1 yeti boinc     37140 Apr 29 12:00 runpilot2-wrapper.sh
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc      5111 Apr 29 12:00 queuedata.json
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc       100 Apr 30 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-30 05:47:07] -rwxr-xr-x 1 yeti boinc      7986 Apr 30 04:50 run_atlas
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc       105 Apr 30 04:50 job.xml
[2025-04-30 05:47:07] -rw-r--r-- 2 yeti boinc    508881 Apr 30 04:50 input.tar.gz
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc      6781 Apr 30 04:50 init_data.xml
[2025-04-30 05:47:07] -rw-r--r-- 2 yeti boinc  29000326 Apr 30 04:50 EVNT.44292255._004131.pool.root.1
[2025-04-30 05:47:07] -rw-r--r-- 2 yeti boinc     17569 Apr 30 04:50 start_atlas.sh
[2025-04-30 05:47:07] drwxrwx--x 2 yeti boinc      4096 Apr 30 04:50 shared
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc         0 Apr 30 04:50 boinc_lockfile
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc      2550 Apr 30 04:50 pandaJob.out
[2025-04-30 05:47:07] -rw------- 1 yeti boinc       462 Apr 30 04:50 setup.sh.local
[2025-04-30 05:47:07] -rw------- 1 yeti boinc    990392 Apr 30 04:50 agis_schedconf.cvmfs.json
[2025-04-30 05:47:07] -rw------- 1 yeti boinc   1596659 Apr 30 04:50 agis_ddmendpoints.agis.ALL.json
[2025-04-30 05:47:07] drwx------ 4 yeti boinc      4096 Apr 30 04:50 pilot3
[2025-04-30 05:47:07] -rw------- 1 yeti boinc 194370082 Apr 30 05:46 HITS.44292257._037802.pool.root.1
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc       529 Apr 30 05:46 boinc_task_state.xml
[2025-04-30 05:47:07] -rw------- 1 yeti boinc      1021 Apr 30 05:46 memory_monitor_summary.json
[2025-04-30 05:47:07] -rw------- 1 yeti boinc    215227 Apr 30 05:46 log.44292257._037802.job.log.tgz.1
[2025-04-30 05:47:07] -rw------- 1 yeti boinc      7644 Apr 30 05:46 heartbeat.json
[2025-04-30 05:47:07] -rw------- 1 yeti boinc        95 Apr 30 05:46 pilot_heartbeat.json
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc        27 Apr 30 05:47 wrapper_checkpoint.txt
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc      8192 Apr 30 05:47 boinc_mmap_file
[2025-04-30 05:47:07] -rw------- 1 yeti boinc      5149 Apr 30 05:47 pilotlog.txt
[2025-04-30 05:47:07] -rw------- 1 yeti boinc    359494 Apr 30 05:47 log.44292257._037802.job.log.1
[2025-04-30 05:47:07] -rw------- 1 yeti boinc       357 Apr 30 05:47 output.list
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc       620 Apr 30 05:47 runtime_log
[2025-04-30 05:47:07] -rw------- 1 yeti boinc    593920 Apr 30 05:47 result.tar.gz
[2025-04-30 05:47:07] -rw------- 1 yeti boinc       639 Apr 30 05:47 vQ6MDmjwwT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIqwLDmtsV3Po.diag
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc     11623 Apr 30 05:47 runtime_log.err
[2025-04-30 05:47:07] -rw-r--r-- 1 yeti boinc     21019 Apr 30 05:47 stderr.txt
[2025-04-30 05:47:07] HITS file was successfully produced:
[2025-04-30 05:47:07] -rw------- 1 yeti boinc 194370082 Apr 30 05:46 shared/HITS.pool.root.1
[2025-04-30 05:47:07]  *** Contents of shared directory: ***
[2025-04-30 05:47:07] insgesamt 219244
[2025-04-30 05:47:07] -rw-r--r-- 2 yeti boinc    508881 Apr 30 04:50 input.tar.gz
[2025-04-30 05:47:07] -rw-r--r-- 2 yeti boinc  29000326 Apr 30 04:50 ATLAS.root_0
[2025-04-30 05:47:07] -rw-r--r-- 2 yeti boinc     17569 Apr 30 04:50 start_atlas.sh
[2025-04-30 05:47:07] -rw------- 1 yeti boinc 194370082 Apr 30 05:46 HITS.pool.root.1
[2025-04-30 05:47:07] -rw------- 1 yeti boinc    593920 Apr 30 05:47 result.tar.gz
05:47:09 (483257): run_atlas exited; CPU time 12261.130094
05:47:09 (483257): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN