Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-30 03:54:02 (54004): Detected: vboxwrapper 26206
2025-04-30 03:54:02 (54004): Detected: BOINC client v8.2.1
2025-04-30 03:54:02 (54004): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-04-30 03:54:03 (54004): Successfully copied 'init_data.xml' to the shared directory.
2025-04-30 03:54:03 (54004): Create VM. (boinc_a30bdd5cb7d0d807, slot#29)
2025-04-30 03:54:04 (54004): Setting Memory Size for VM. (4096MB)
2025-04-30 03:54:04 (54004): Setting CPU Count for VM. (1)
2025-04-30 03:54:04 (54004): Setting Chipset Options for VM.
2025-04-30 03:54:05 (54004): Setting Graphics Controller Options for VM.
2025-04-30 03:54:05 (54004): Setting Boot Options for VM.
2025-04-30 03:54:05 (54004): Setting Network Configuration for NAT.
2025-04-30 03:54:05 (54004): Enabling VM Network Access.
2025-04-30 03:54:06 (54004): Disabling USB Support for VM.
2025-04-30 03:54:06 (54004): Disabling COM Port Support for VM.
2025-04-30 03:54:06 (54004): Disabling LPT Port Support for VM.
2025-04-30 03:54:06 (54004): Disabling Audio Support for VM.
2025-04-30 03:54:07 (54004): Disabling Clipboard Support for VM.
2025-04-30 03:54:07 (54004): Disabling Drag and Drop Support for VM.
2025-04-30 03:54:07 (54004): Adding storage controller(s) to VM.
2025-04-30 03:54:07 (54004): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-30 03:54:08 (54004): Adding VirtualBox Guest Additions to VM.
2025-04-30 03:54:08 (54004): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-30 03:54:08 (54004): forwarding host port 55489 to guest port 80
2025-04-30 03:54:09 (54004): Enabling remote desktop for VM.
2025-04-30 03:54:09 (54004): Required extension pack not installed, remote desktop not enabled.
2025-04-30 03:54:09 (54004): Enabling shared directory for VM.
2025-04-30 03:54:09 (54004): Starting VM using VBoxManage interface. (boinc_a30bdd5cb7d0d807, slot#29)
2025-04-30 03:54:14 (54004): Successfully started VM. (PID = '62628')
2025-04-30 03:54:14 (54004): Reporting VM Process ID to BOINC.
2025-04-30 03:54:14 (54004): Guest Log: BIOS: VirtualBox 7.1.8
2025-04-30 03:54:14 (54004): Guest Log: CPUID EDX: 0x178bfbff
2025-04-30 03:54:14 (54004): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-30 03:54:14 (54004): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-30 03:54:14 (54004): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-30 03:54:14 (54004): Detected: Web Application Enabled (http://localhost:55489)
2025-04-30 03:54:14 (54004): Preference change detected
2025-04-30 03:54:14 (54004): Setting CPU throttle for VM. (100%)
2025-04-30 03:54:14 (54004): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-30 03:54:16 (54004): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-30 03:54:16 (54004): Guest Log: BIOS: Booting from Hard Disk...
2025-04-30 03:54:18 (54004): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-30 03:54:18 (54004): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-30 03:54:18 (54004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-30 03:54:21 (54004): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-30 03:54:21 (54004): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-30 03:54:26 (54004): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-30 03:54:26 (54004): Guest Log: 00:00:00.000088 main     Log opened 2025-04-30T03:54:24.814060000Z
2025-04-30 03:54:26 (54004): Guest Log: 00:00:00.000196 main     OS Product: Linux
2025-04-30 03:54:26 (54004): Guest Log: 00:00:00.000215 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-30 03:54:26 (54004): Guest Log: 00:00:00.000230 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-30 03:54:26 (54004): Guest Log: 00:00:00.000244 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-30 03:54:26 (54004): Guest Log: 00:00:00.000245 main     Process ID: 1242
2025-04-30 03:54:26 (54004): Guest Log: 00:00:00.000245 main     Package type: LINUX_64BITS_GENERIC
2025-04-30 03:54:26 (54004): Guest Log: 00:00:00.000923 main     5.2.32 r132073 started. Verbose level = 0
2025-04-30 03:54:26 (54004): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-30 03:54:26 (54004): Guest Log: [INFO] Mounting shared directory
2025-04-30 03:54:26 (54004): Guest Log: [INFO] Checking for init_data.xml
2025-04-30 03:54:29 (54004): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-30 03:54:29 (54004): Guest Log: [INFO] Detected branch: prod
2025-04-30 03:54:29 (54004): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-30 03:54:29 (54004): Guest Log: Copying input files
2025-04-30 03:54:30 (54004): Guest Log: Copied input files into RunAtlas.
2025-04-30 03:54:30 (54004): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-30 03:54:36 (54004): Guest Log: 00:00:10.020162 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 718 916 000ns (GuestNow=1 745 978 076 105 098 000 ns GuestLast=1 745 985 264 824 014 000 ns fSetTimeLastLoop=true )
2025-04-30 03:54:37 (54004): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-30 03:54:37 (54004): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-30 03:54:37 (54004): Guest Log: 2.6.3.0 1511 0 31544 145435 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-30 03:54:37 (54004): Guest Log: copied the webapp to /var/www
2025-04-30 03:54:37 (54004): Guest Log: core_number=1
2025-04-30 03:54:37 (54004): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-30 03:54:37 (54004): Guest Log:  *** Starting ATLAS job. (PandaID=6623661690 taskID=44456508) ***
2025-04-30 05:34:17 (54004): Status Report: Elapsed Time: '6000.000000'
2025-04-30 05:34:17 (54004): Status Report: CPU Time: '5798.437500'
2025-04-30 07:14:20 (54004): Status Report: Elapsed Time: '12000.000000'
2025-04-30 07:14:20 (54004): Status Report: CPU Time: '11775.750000'
2025-04-30 08:54:22 (54004): Status Report: Elapsed Time: '18000.000000'
2025-04-30 08:54:22 (54004): Status Report: CPU Time: '17751.390625'
2025-04-30 09:04:15 (54004): Guest Log:  *** Job finished ***
2025-04-30 09:04:15 (54004): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:03:55,645 | INFO     | [data] queue_monitor thread has finished
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:03:59,962 | INFO     | job.realtimelogging is not enabled
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:00,964 | INFO     | [payload] run_realtimelog thread has finished
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:01,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380173612864)>', '<ExcThread(monitor, started 140379588388608)>']
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:02,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:02,128 | INFO     | [monitor] control thread has ended
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:06,958 | INFO     | all workflow threads have been joined
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:06,958 | INFO     | end of generic workflow (traces error code: 0)
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:06,958 | INFO     | traces error code: 0
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:06,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:07,060 [wrapper] ==== pilot stdout END ====
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:07,062 [wrapper] ==== wrapper stdout RESUME ====
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:07,064 [wrapper] pilotpid: 5762
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:07,067 [wrapper] Pilot exit status: 0
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:07,083 [wrapper] pandaids: 6623661690
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:07,097 [wrapper] cleanup supervisor_pilot 20429 5763
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:07,099 [wrapper] Test setup, not cleaning
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:07,101 [wrapper] apfmon messages muted
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:07,102 [wrapper] ==== wrapper stdout END ====
2025-04-30 09:04:15 (54004): Guest Log: 2025-04-30 07:04:07,103 [wrapper] ==== wrapper stderr END ====
2025-04-30 09:04:15 (54004): Guest Log:  *** Error codes and diagnostics ***
2025-04-30 09:04:15 (54004): Guest Log:     "exeErrorCode": 0,
2025-04-30 09:04:15 (54004): Guest Log:     "exeErrorDiag": "",
2025-04-30 09:04:15 (54004): Guest Log:     "pilotErrorCode": 0,
2025-04-30 09:04:15 (54004): Guest Log:     "pilotErrorDiag": "",
2025-04-30 09:04:15 (54004): Guest Log:  *** Listing of results directory ***
2025-04-30 09:04:15 (54004): Guest Log: total 173312
2025-04-30 09:04:15 (54004): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 29 14:42 pilot3.tar.gz
2025-04-30 09:04:15 (54004): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 29 14:54 queuedata.json
2025-04-30 09:04:15 (54004): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 29 14:54 runpilot2-wrapper.sh
2025-04-30 09:04:15 (54004): Guest Log: -rwxr-xr-x. 1 atlas atlas      9354 Apr 30 01:54 init_data.xml
2025-04-30 09:04:15 (54004): Guest Log: -rwxr-xr-x. 1 atlas atlas    508889 Apr 30 01:54 input.tar.gz
2025-04-30 09:04:15 (54004): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 30 01:54 start_atlas.sh
2025-04-30 09:04:15 (54004): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 30 01:54 EVNT.42273306._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-04-30 09:04:15 (54004): Guest Log: -rw-r--r--. 1 atlas atlas      2598 Apr 30 01:54 pandaJob.out
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas       460 Apr 30 01:54 setup.sh.local
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas    990786 Apr 30 01:54 agis_schedconf.cvmfs.json
2025-04-30 09:04:15 (54004): Guest Log: drwx------. 4 atlas atlas      4096 Apr 30 01:54 pilot3
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas        95 Apr 30 07:03 pilot_heartbeat.json
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas 169694026 Apr 30 07:03 HITS.44456508._000010.pool.root.1
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 30 07:03 memory_monitor_summary.json
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 30 07:03 agis_ddmendpoints.agis.ALL.json
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas    338686 Apr 30 07:03 log.44456508._000010.job.log.tgz.1
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas      7675 Apr 30 07:03 heartbeat.json
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas      4608 Apr 30 07:04 pilotlog.txt
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas   1664281 Apr 30 07:04 log.44456508._000010.job.log.1
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas       357 Apr 30 07:04 output.list
2025-04-30 09:04:15 (54004): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 30 07:04 runtime_log
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas   2017280 Apr 30 07:04 result.tar.gz
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas       656 Apr 30 07:04 YkKODmDX1T7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHGxLDm7jjwOo.diag
2025-04-30 09:04:15 (54004): Guest Log: -rw-r--r--. 1 atlas atlas     11174 Apr 30 07:04 runtime_log.err
2025-04-30 09:04:15 (54004): Guest Log: Looking for outputfile HITS.44456508._000010.pool.root.1
2025-04-30 09:04:15 (54004): Guest Log: HITS file was successfully produced
2025-04-30 09:04:15 (54004): Guest Log: -rw-------. 1 atlas atlas 169694026 Apr 30 07:03 /home/atlas/RunAtlas/HITS.44456508._000010.pool.root.1
2025-04-30 09:04:16 (54004): Guest Log: Successfully finished the ATLAS job!
2025-04-30 09:04:16 (54004): Guest Log: Copying the results back to the shared directory!
2025-04-30 09:04:16 (54004): Guest Log:  *** Contents of shared directory: ***
2025-04-30 09:04:16 (54004): Guest Log: total 521144
2025-04-30 09:04:16 (54004): Guest Log: -rwxrwxrwx. 1 root root 361389652 Apr 30 01:54 ATLAS.root_0
2025-04-30 09:04:16 (54004): Guest Log: -rwxrwxrwx. 1 root root 169694026 Apr 30  2025 HITS.pool.root.1
2025-04-30 09:04:16 (54004): Guest Log: -rwxrwxrwx. 1 root root      9354 Apr 30 01:54 init_data.xml
2025-04-30 09:04:16 (54004): Guest Log: -rwxrwxrwx. 1 root root    508889 Apr 30 01:27 input.tar.gz
2025-04-30 09:04:16 (54004): Guest Log: -rwxrwxrwx. 1 root root   2017280 Apr 30  2025 result.tar.gz
2025-04-30 09:04:16 (54004): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 30 01:27 start_atlas.sh
2025-04-30 09:04:16 (54004): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-30 09:04:16 (54004): VM Completion File Detected.
2025-04-30 09:04:16 (54004): Powering off VM.
2025-04-30 09:04:16 (54004): Successfully stopped VM.
2025-04-30 09:04:16 (54004): Deregistering VM. (boinc_a30bdd5cb7d0d807, slot#29)
2025-04-30 09:04:16 (54004): Removing network bandwidth throttle group from VM.
2025-04-30 09:04:16 (54004): Removing VM from VirtualBox.
09:04:22 (54004): called boinc_finish(0)

</stderr_txt>
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