Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:21:28 (3592046): wrapper (7.7.26015): starting
21:21:28 (3592046): wrapper: running run_atlas (--nthreads 10)
[2025-04-29 21:21:28] Arguments: --nthreads 10
[2025-04-29 21:21:28] Threads: 10
[2025-04-29 21:21:28] Checking for CVMFS
[2025-04-29 21:21:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 21:21:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 21:21:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 21:21:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 21:21:29] 2.12.6.0 11904 82566 200708 145434 3 304 21990529 32935937 10676 130560 0 143706356 99.575 172047640 28306 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-29 21:21:29] CVMFS is ok
[2025-04-29 21:21:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-29 21:21:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-29 21:21:29] Further information can be found at the LHC@home message board.
[2025-04-29 21:21:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 21:21:29] Checking for apptainer binary...
[2025-04-29 21:21:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-29 21:21:29] Running /usr/bin/apptainer --version
[2025-04-29 21:21:29] apptainer version 1.4.0-1.el9
[2025-04-29 21:21:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 21:21:29] c-6-3.aglt2.org
[2025-04-29 21:21:29] apptainer works
[2025-04-29 21:21:29] Set ATHENA_PROC_NUMBER=10
[2025-04-29 21:21:29] Set ATHENA_CORE_NUMBER=10
[2025-04-29 21:21:29] Starting ATLAS job with PandaID=6621279594
[2025-04-29 21:21:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-30 00:45:24]  *** The last 200 lines of the pilot log: ***
[2025-04-30 00:45:24] 2025-04-30 04:45:07,975 | INFO     | -- intersect: -62500994349.58472
[2025-04-30 00:45:24] 2025-04-30 04:45:07,975 | INFO     | intersect: -62500994349.58472
[2025-04-30 00:45:24] 2025-04-30 04:45:07,976 | INFO     | chi2: 5.9858454233953555
[2025-04-30 00:45:24] 2025-04-30 04:45:07,976 | INFO     | sum of square deviations: 2299478988.7487054
[2025-04-30 00:45:24] 2025-04-30 04:45:07,978 | INFO     | sum of deviations: 98401062840.91273
[2025-04-30 00:45:24] 2025-04-30 04:45:07,978 | INFO     | mean x: 1745982043.297436
[2025-04-30 00:45:24] 2025-04-30 04:45:07,978 | INFO     | mean y: 2277361.2256410257
[2025-04-30 00:45:24] 2025-04-30 04:45:07,978 | INFO     | -- intersect: -74713121040.87378
[2025-04-30 00:45:24] 2025-04-30 04:45:07,978 | INFO     | intersect: -74713121040.87378
[2025-04-30 00:45:24] 2025-04-30 04:45:07,979 | INFO     | chi2: 5.336698788317373
[2025-04-30 00:45:24] 2025-04-30 04:45:07,979 | INFO     | current chi2=5.336698788317373 (change=10.844694260577253 %)
[2025-04-30 00:45:24] 2025-04-30 04:45:07,979 | INFO     | right removable region: 194
[2025-04-30 00:45:24] 2025-04-30 04:45:07,979 | INFO     | sum of square deviations: 2299443608.7487054
[2025-04-30 00:45:24] 2025-04-30 04:45:07,981 | INFO     | sum of deviations: 42069214796.97945
[2025-04-30 00:45:24] 2025-04-30 04:45:07,981 | INFO     | mean x: 1745982348.297436
[2025-04-30 00:45:24] 2025-04-30 04:45:07,981 | INFO     | mean y: 2308710.758974359
[2025-04-30 00:45:24] 2025-04-30 04:45:07,981 | INFO     | -- intersect: -31941117152.261017
[2025-04-30 00:45:24] 2025-04-30 04:45:07,981 | INFO     | intersect: -31941117152.261017
[2025-04-30 00:45:24] 2025-04-30 04:45:07,982 | INFO     | chi2: 3.3209248506427187
[2025-04-30 00:45:24] 2025-04-30 04:45:07,982 | INFO     | current chi2=3.3209248506427187 (change=44.520370712162695 %)
[2025-04-30 00:45:24] 2025-04-30 04:45:07,982 | INFO     | sum of square deviations: 2127059895.7947314
[2025-04-30 00:45:24] 2025-04-30 04:45:07,983 | INFO     | sum of deviations: 5263535200.173672
[2025-04-30 00:45:24] 2025-04-30 04:45:07,983 | INFO     | mean x: 1745982500.805263
[2025-04-30 00:45:24] 2025-04-30 04:45:07,984 | INFO     | mean y: 2341278.6263157893
[2025-04-30 00:45:24] 2025-04-30 04:45:07,984 | INFO     | -- intersect: -4318195425.603205
[2025-04-30 00:45:24] 2025-04-30 04:45:07,984 | INFO     | intersect: -4318195425.603205
[2025-04-30 00:45:24] 2025-04-30 04:45:07,984 | INFO     | chi2: 1.790754822682214
[2025-04-30 00:45:24] 2025-04-30 04:45:07,984 | INFO     | current chi2=1.790754822682214 (change=46.07662313299144 %)
[2025-04-30 00:45:24] 2025-04-30 04:45:07,985 | INFO     | sum of square deviations: 1963513557.8162093
[2025-04-30 00:45:24] 2025-04-30 04:45:07,986 | INFO     | sum of deviations: -22118849974.908104
[2025-04-30 00:45:24] 2025-04-30 04:45:07,986 | INFO     | mean x: 1745982653.3135135
[2025-04-30 00:45:24] 2025-04-30 04:45:07,986 | INFO     | mean y: 2366704.843243243
[2025-04-30 00:45:24] 2025-04-30 04:45:07,986 | INFO     | -- intersect: 19670745470.90851
[2025-04-30 00:45:24] 2025-04-30 04:45:07,986 | INFO     | intersect: 19670745470.90851
[2025-04-30 00:45:24] 2025-04-30 04:45:07,987 | INFO     | chi2: 0.8497881544337998
[2025-04-30 00:45:24] 2025-04-30 04:45:07,987 | INFO     | current chi2=0.8497881544337998 (change=52.54581232058463 %)
[2025-04-30 00:45:24] 2025-04-30 04:45:07,987 | INFO     | sum of square deviations: 1808572032.3111084
[2025-04-30 00:45:24] 2025-04-30 04:45:07,988 | INFO     | sum of deviations: -23195655941.06667
[2025-04-30 00:45:24] 2025-04-30 04:45:07,988 | INFO     | mean x: 1745982805.8222222
[2025-04-30 00:45:24] 2025-04-30 04:45:07,989 | INFO     | mean y: 2367686.966666667
[2025-04-30 00:45:24] 2025-04-30 04:45:07,989 | INFO     | -- intersect: 22395291894.20325
[2025-04-30 00:45:24] 2025-04-30 04:45:07,989 | INFO     | intersect: 22395291894.20325
[2025-04-30 00:45:24] 2025-04-30 04:45:07,989 | INFO     | chi2: 0.8010860979751832
[2025-04-30 00:45:24] 2025-04-30 04:45:07,989 | INFO     | current chi2=0.8010860979751832 (change=5.731082059041655 %)
[2025-04-30 00:45:24] 2025-04-30 04:45:07,989 | INFO     | left removable region: 40
[2025-04-30 00:45:24] 2025-04-30 04:45:07,990 | INFO     | sum of square deviations: 1132630754.6558485
[2025-04-30 00:45:24] 2025-04-30 04:45:07,956 | INFO     | monitor loop #799: job 0:6621279594 is in state 'finished'
[2025-04-30 00:45:24] 2025-04-30 04:45:07,991 | INFO     | sum of deviations: 2956409567.610391
[2025-04-30 00:45:24] 2025-04-30 04:45:07,995 | INFO     | mean x: 1745983232.8766234
[2025-04-30 00:45:24] 2025-04-30 04:45:07,995 | INFO     | mean y: 2360976.5584415584
[2025-04-30 00:45:24] 2025-04-30 04:45:07,995 | INFO     | -- intersect: -4555030312.125225
[2025-04-30 00:45:24] 2025-04-30 04:45:07,995 | INFO     | intersect: -4555030312.125225
[2025-04-30 00:45:24] 2025-04-30 04:45:07,995 | INFO     | chi2: 0.048660144213769456
[2025-04-30 00:45:24] 2025-04-30 04:45:07,996 | INFO     | -- intersect: -4555030312.125225
[2025-04-30 00:45:24] 2025-04-30 04:45:07,996 | INFO     | current memory leak: 2.61 B/s (using 154 data points, chi2=0.05)
[2025-04-30 00:45:24] 2025-04-30 04:45:08,001 | INFO     | ..............................
[2025-04-30 00:45:24] 2025-04-30 04:45:08,001 | INFO     | . Timing measurements:
[2025-04-30 00:45:24] 2025-04-30 04:45:08,001 | INFO     | . get job = 0 s
[2025-04-30 00:45:24] 2025-04-30 04:45:08,001 | INFO     | . initial setup = 3 s
[2025-04-30 00:45:24] 2025-04-30 04:45:08,001 | INFO     | . payload setup = 5 s
[2025-04-30 00:45:24] 2025-04-30 04:45:08,001 | INFO     | . stage-in = 0 s
[2025-04-30 00:45:24] 2025-04-30 04:45:08,002 | INFO     | . payload execution = 12166 s
[2025-04-30 00:45:24] 2025-04-30 04:45:08,002 | INFO     | . stage-out = 3 s
[2025-04-30 00:45:24] 2025-04-30 04:45:08,002 | INFO     | . log creation = 0 s
[2025-04-30 00:45:24] 2025-04-30 04:45:08,002 | INFO     | ..............................
[2025-04-30 00:45:24] 2025-04-30 04:45:07,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-30 00:45:24] 2025-04-30 04:45:08,412 | INFO     | 
[2025-04-30 00:45:24] 2025-04-30 04:45:08,412 | INFO     | job summary report
[2025-04-30 00:45:24] 2025-04-30 04:45:08,413 | INFO     | --------------------------------------------------
[2025-04-30 00:45:24] 2025-04-30 04:45:08,413 | INFO     | PanDA job id: 6621279594
[2025-04-30 00:45:24] 2025-04-30 04:45:08,413 | INFO     | task id: 44292257
[2025-04-30 00:45:24] 2025-04-30 04:45:08,413 | INFO     | errors: (none)
[2025-04-30 00:45:24] 2025-04-30 04:45:08,413 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-30 00:45:24] 2025-04-30 04:45:08,413 | INFO     | pilot state: finished 
[2025-04-30 00:45:24] 2025-04-30 04:45:08,413 | INFO     | transexitcode: 0
[2025-04-30 00:45:24] 2025-04-30 04:45:08,413 | INFO     | exeerrorcode: 0
[2025-04-30 00:45:24] 2025-04-30 04:45:08,414 | INFO     | exeerrordiag: 
[2025-04-30 00:45:24] 2025-04-30 04:45:08,414 | INFO     | exitcode: 0
[2025-04-30 00:45:24] 2025-04-30 04:45:08,414 | INFO     | exitmsg: OK
[2025-04-30 00:45:24] 2025-04-30 04:45:08,414 | INFO     | cpuconsumptiontime: 53697 s
[2025-04-30 00:45:24] 2025-04-30 04:45:08,414 | INFO     | nevents: 400
[2025-04-30 00:45:24] 2025-04-30 04:45:08,414 | INFO     | neventsw: 0
[2025-04-30 00:45:24] 2025-04-30 04:45:08,414 | INFO     | pid: 3604211
[2025-04-30 00:45:24] 2025-04-30 04:45:08,414 | INFO     | pgrp: 3604211
[2025-04-30 00:45:24] 2025-04-30 04:45:08,414 | INFO     | corecount: 10
[2025-04-30 00:45:24] 2025-04-30 04:45:08,415 | INFO     | event service: False
[2025-04-30 00:45:24] 2025-04-30 04:45:08,415 | INFO     | sizes: {0: 2393506, 1: 2393761, 5: 2393967, 12: 2394023, 12175: 2423584, 12179: 2432525, 12182: 2432709, 12192: 2432879}
[2025-04-30 00:45:24] 2025-04-30 04:45:08,415 | INFO     | --------------------------------------------------
[2025-04-30 00:45:24] 2025-04-30 04:45:08,415 | INFO     | 
[2025-04-30 00:45:24] 2025-04-30 04:45:08,415 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-30 00:45:24] 2025-04-30 04:45:08,457 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,458 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,458 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,458 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,458 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,460 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-30 00:45:24] 2025-04-30 04:45:08,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,460 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-30 00:45:24] 2025-04-30 04:45:08,460 | INFO     | job 6621279594 has completed (purged errors)
[2025-04-30 00:45:24] 2025-04-30 04:45:08,460 | INFO     | overall cleanup function is called
[2025-04-30 00:45:24] 2025-04-30 04:45:09,495 | INFO     | --- collectZombieJob: --- 10, [3604211]
[2025-04-30 00:45:24] 2025-04-30 04:45:09,495 | INFO     | zombie collector waiting for pid 3604211
[2025-04-30 00:45:24] 2025-04-30 04:45:09,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-30 00:45:24] 2025-04-30 04:45:09,496 | INFO     | collected zombie processes
[2025-04-30 00:45:24] 2025-04-30 04:45:09,496 | INFO     | will attempt to kill all subprocesses of pid=3604211
[2025-04-30 00:45:24] 2025-04-30 04:45:09,577 | INFO     | PID=3595806 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-30 00:45:24] 2025-04-30 04:45:09,578 | INFO     | .. there are 20 such processes running
[2025-04-30 00:45:24] 2025-04-30 04:45:10,190 | INFO     | process IDs to be killed: [3604211] (in reverse order)
[2025-04-30 00:45:24] 2025-04-30 04:45:10,466 | WARNING  | found no corresponding commands to process id(s)
[2025-04-30 00:45:24] 2025-04-30 04:45:10,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-30 00:45:24] 2025-04-30 04:45:10,524 | INFO     | did not find any defunct processes belonging to 3604211
[2025-04-30 00:45:24] 2025-04-30 04:45:10,555 | INFO     | did not find any defunct processes belonging to 3604211
[2025-04-30 00:45:24] 2025-04-30 04:45:10,561 | INFO     | ready for new job
[2025-04-30 00:45:24] 2025-04-30 04:45:10,561 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-30 00:45:24] 2025-04-30 04:45:10,564 | INFO     | **************************************
[2025-04-30 00:45:24] 2025-04-30 04:45:10,566 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-30 00:45:24] 2025-04-30 04:45:10,566 | INFO     | **************************************
[2025-04-30 00:45:24] 2025-04-30 04:45:10,566 | INFO     | 
[2025-04-30 00:45:24] 2025-04-30 04:45:10,581 | INFO     | architecture information:
[2025-04-30 00:45:24] 2025-04-30 04:45:10,586 | INFO     | executing command: cat /etc/os-release
[2025-04-30 00:45:24] 2025-04-30 04:45:10,648 | INFO     | cat /etc/os-release:
[2025-04-30 00:45:24] NAME="CentOS Linux"
[2025-04-30 00:45:24] VERSION="7 (Core)"
[2025-04-30 00:45:24] ID="centos"
[2025-04-30 00:45:24] ID_LIKE="rhel fedora"
[2025-04-30 00:45:24] VERSION_ID="7"
[2025-04-30 00:45:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-30 00:45:24] ANSI_COLOR="0;31"
[2025-04-30 00:45:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-30 00:45:24] HOME_URL="https://www.centos.org/"
[2025-04-30 00:45:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-30 00:45:24] 
[2025-04-30 00:45:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-30 00:45:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-30 00:45:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-30 00:45:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-30 00:45:24] 
[2025-04-30 00:45:24] 2025-04-30 04:45:10,649 | INFO     | **************************************
[2025-04-30 00:45:24] 2025-04-30 04:45:11,153 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-30 00:45:24] 2025-04-30 04:45:11,181 | INFO     | sufficient remaining disk space (75977719808 B)
[2025-04-30 00:45:24] 2025-04-30 04:45:11,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-30 00:45:24] 2025-04-30 04:45:11,181 | INFO     | current server update state: UPDATING_FINAL
[2025-04-30 00:45:24] 2025-04-30 04:45:11,181 | INFO     | update_server=False
[2025-04-30 00:45:24] 2025-04-30 04:45:11,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-30 00:45:24] 2025-04-30 04:45:11,183 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-30 00:45:24] 2025-04-30 04:45:11,187 | INFO     | all job control threads have been joined
[2025-04-30 00:45:24] 2025-04-30 04:45:11,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-30 00:45:24] 2025-04-30 04:45:11,541 | INFO     | aborting loop
[2025-04-30 00:45:24] 2025-04-30 04:45:11,584 | INFO     | found 0 job(s) in 20 queues
[2025-04-30 00:45:24] 2025-04-30 04:45:11,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-30 00:45:24] 2025-04-30 04:45:11,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-30 00:45:24] 2025-04-30 04:45:11,588 | INFO     | all data control threads have been joined
[2025-04-30 00:45:24] 2025-04-30 04:45:12,187 | INFO     | [job] retrieve thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:12,193 | INFO     | [job] control thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:12,306 | INFO     | all payload control threads have been joined
[2025-04-30 00:45:24] 2025-04-30 04:45:12,361 | INFO     | [payload] failed_post thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:12,408 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:12,546 | INFO     | [job] job monitor thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:12,594 | INFO     | [data] control thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:12,635 | INFO     | [job] create_data_payload thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:12,842 | INFO     | [payload] validate_pre thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:12,885 | INFO     | [job] validate thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:13,107 | INFO     | [data] copytool_in thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:13,111 | INFO     | [payload] execute_payloads thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:13,192 | INFO     | [data] copytool_out thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:13,193 | INFO     | [payload] validate_post thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:13,312 | INFO     | [payload] control thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:13,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-30 00:45:24] 2025-04-30 04:45:13,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-30 00:45:24] 2025-04-30 04:45:14,339 | INFO     | [job] queue monitor thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:17,395 | INFO     | [data] queue_monitor thread has finished
[2025-04-30 00:45:24] 2025-04-30 04:45:18,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489539794752)>', '<ExcThread(monitor, started 140488774510336)>']
[2025-04-30 00:45:24] 2025-04-30 04:45:19,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-30 00:45:24] 2025-04-30 04:45:19,670 | INFO     | [monitor] control thread has ended
[2025-04-30 00:45:24] 2025-04-30 04:45:23,672 | INFO     | all workflow threads have been joined
[2025-04-30 00:45:24] 2025-04-30 04:45:23,672 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-30 00:45:24] 2025-04-30 04:45:23,673 | INFO     | traces error code: 0
[2025-04-30 00:45:24] 2025-04-30 04:45:23,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-30 00:45:24] 2025-04-30 04:45:23,982 [wrapper] ==== pilot stdout END ====
[2025-04-30 00:45:24] 2025-04-30 04:45:23,986 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-30 00:45:24] 2025-04-30 04:45:23,989 [wrapper] pilotpid: 3595806
[2025-04-30 00:45:24] 2025-04-30 04:45:23,992 [wrapper] Pilot exit status: 0
[2025-04-30 00:45:24] 2025-04-30 04:45:24,008 [wrapper] pandaids: 6621279594
[2025-04-30 00:45:24] 2025-04-30 04:45:24,118 [wrapper] cleanup supervisor_pilot  200801 3595807
[2025-04-30 00:45:24] 2025-04-30 04:45:24,121 [wrapper] Test setup, not cleaning
[2025-04-30 00:45:24] 2025-04-30 04:45:24,125 [wrapper] apfmon messages muted
[2025-04-30 00:45:24] 2025-04-30 04:45:24,147 [wrapper] ==== wrapper stdout END ====
[2025-04-30 00:45:24] 2025-04-30 04:45:24,159 [wrapper] ==== wrapper stderr END ====
[2025-04-30 00:45:24]  *** Error codes and diagnostics ***
[2025-04-30 00:45:24]     "exeErrorCode": 0,
[2025-04-30 00:45:24]     "exeErrorDiag": "",
[2025-04-30 00:45:24]     "pilotErrorCode": 0,
[2025-04-30 00:45:24]     "pilotErrorDiag": "",
[2025-04-30 00:45:24]  *** Listing of results directory ***
[2025-04-30 00:45:24] total 420848
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas    495897 Apr 29 16:41 pilot3.tar.gz
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas      5111 Apr 29 16:51 queuedata.json
[2025-04-30 00:45:24] -rwx------. 1 boincer umatlas     37140 Apr 29 16:51 runpilot2-wrapper.sh
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas       100 Apr 29 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-30 00:45:24] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 29 21:21 run_atlas
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas       105 Apr 29 21:21 job.xml
[2025-04-30 00:45:24] -rw-r--r--. 2 boincer umatlas 225598145 Apr 29 21:21 EVNT.44292255._004341.pool.root.1
[2025-04-30 00:45:24] -rw-r--r--. 2 boincer umatlas     17569 Apr 29 21:21 start_atlas.sh
[2025-04-30 00:45:24] drwxrwx--x. 2 boincer umatlas      4096 Apr 29 21:21 shared
[2025-04-30 00:45:24] -rw-r--r--. 2 boincer umatlas    508890 Apr 29 21:21 input.tar.gz
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas         0 Apr 29 21:21 boinc_lockfile
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas      2552 Apr 29 21:21 pandaJob.out
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas       467 Apr 29 21:21 setup.sh.local
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas    990778 Apr 29 21:21 agis_schedconf.cvmfs.json
[2025-04-30 00:45:24] drwx------. 4 boincer umatlas      4096 Apr 29 21:21 pilot3
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas       531 Apr 30 00:44 boinc_task_state.xml
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas 198586032 Apr 30 00:44 HITS.44292257._039644.pool.root.1
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas        95 Apr 30 00:44 pilot_heartbeat.json
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas      1041 Apr 30 00:44 memory_monitor_summary.json
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas   1596659 Apr 30 00:44 agis_ddmendpoints.agis.ALL.json
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas    404378 Apr 30 00:44 log.44292257._039644.job.log.tgz.1
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas      7716 Apr 30 00:45 heartbeat.json
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas      6658 Apr 30 00:45 init_data.xml
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas      8192 Apr 30 00:45 boinc_mmap_file
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas        28 Apr 30 00:45 wrapper_checkpoint.txt
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas      4353 Apr 30 00:45 pilotlog.txt
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas   1059386 Apr 30 00:45 log.44292257._039644.job.log.1
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas       357 Apr 30 00:45 output.list
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas       620 Apr 30 00:45 runtime_log
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas   1484800 Apr 30 00:45 result.tar.gz
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas     11406 Apr 30 00:45 runtime_log.err
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas       653 Apr 30 00:45 2AWMDm066T7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmZcxLDmUuv0en.diag
[2025-04-30 00:45:24] -rw-r--r--. 1 boincer umatlas     21014 Apr 30 00:45 stderr.txt
[2025-04-30 00:45:24] HITS file was successfully produced:
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas 198586032 Apr 30 00:44 shared/HITS.pool.root.1
[2025-04-30 00:45:24]  *** Contents of shared directory: ***
[2025-04-30 00:45:24] total 416220
[2025-04-30 00:45:24] -rw-r--r--. 2 boincer umatlas 225598145 Apr 29 21:21 ATLAS.root_0
[2025-04-30 00:45:24] -rw-r--r--. 2 boincer umatlas     17569 Apr 29 21:21 start_atlas.sh
[2025-04-30 00:45:24] -rw-r--r--. 2 boincer umatlas    508890 Apr 29 21:21 input.tar.gz
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas 198586032 Apr 30 00:44 HITS.pool.root.1
[2025-04-30 00:45:24] -rw-------. 1 boincer umatlas   1484800 Apr 30 00:45 result.tar.gz
00:45:26 (3592046): run_atlas exited; CPU time 54097.511668
00:45:26 (3592046): called boinc_finish(0)

</stderr_txt>
]]>

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