Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:38:31 (2047293): wrapper (7.7.26015): starting
06:38:31 (2047293): wrapper: running run_atlas (--nthreads 4)
[2025-04-30 06:38:31] Arguments: --nthreads 4
[2025-04-30 06:38:31] Threads: 4
[2025-04-30 06:38:31] Checking for CVMFS
[2025-04-30 06:38:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-30 06:38:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-30 06:38:31] Running cvmfs_config stat atlas.cern.ch
[2025-04-30 06:38:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-30 06:38:32] 2.12.7.0 447398 3630 86624 145440 2 55 8258110 10240000 910 130560 0 4149636 99.942 1715351 468 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-04-30 06:38:32] CVMFS is ok
[2025-04-30 06:38:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-30 06:38:32] Checking for apptainer binary...
[2025-04-30 06:38:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-30 06:38:32] Running /usr/bin/apptainer --version
[2025-04-30 06:38:32] apptainer version 1.3.4
[2025-04-30 06:38:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-30 06:38:32] atlas7l1
[2025-04-30 06:38:32] apptainer works
[2025-04-30 06:38:32] Set ATHENA_PROC_NUMBER=4
[2025-04-30 06:38:32] Set ATHENA_CORE_NUMBER=4
[2025-04-30 06:38:32] Starting ATLAS job with PandaID=6623663989
[2025-04-30 06:38:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-30 07:30:42]  *** The last 200 lines of the pilot log: ***
[2025-04-30 07:30:42]  storage_token=
[2025-04-30 07:30:42]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6623663989/log.44456553._000025.job.log.tgz.1
[2025-04-30 07:30:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/66/log.44456553._000025.job.log.tgz.1
[2025-04-30 07:30:42]  workdir=None
[2025-04-30 07:30:42] ]
[2025-04-30 07:30:42] 2025-04-30 05:30:14,622 | INFO     | transferring file log.44456553._000025.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6623663989/log.44456553._000025.job.log.tgz.1 to /var/li
[2025-04-30 07:30:42] 2025-04-30 05:30:14,623 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6623663989/log.44456553._000025.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-04-30 07:30:42] 2025-04-30 05:30:14,639 | INFO     | adding to output.list: log.44456553._000025.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/66/log.44456553._000025.job.log.tg
[2025-04-30 07:30:42] 2025-04-30 05:30:14,640 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-30 07:30:42] 2025-04-30 05:30:14,640 | INFO     | summary of transferred files:
[2025-04-30 07:30:42] 2025-04-30 05:30:14,640 | INFO     |  -- lfn=log.44456553._000025.job.log.tgz.1, status_code=0, status=transferred
[2025-04-30 07:30:42] 2025-04-30 05:30:14,640 | INFO     | stage-out finished correctly
[2025-04-30 07:30:42] 2025-04-30 05:30:15,468 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-30 07:30:42] 2025-04-30 05:30:18,265 | INFO     | job 6623663989 has state=finished
[2025-04-30 07:30:42] 2025-04-30 05:30:18,265 | INFO     | preparing for final server update for job 6623663989 in state='finished'
[2025-04-30 07:30:42] 2025-04-30 05:30:18,268 | INFO     | this job has now completed (state=finished)
[2025-04-30 07:30:42] 2025-04-30 05:30:18,268 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-30 07:30:42] 2025-04-30 05:30:18,269 | INFO     | log transfer has been attempted: DONE
[2025-04-30 07:30:42] 2025-04-30 05:30:18,269 | INFO     | job 6623663989 has finished - writing final server update
[2025-04-30 07:30:42] 2025-04-30 05:30:18,269 | INFO     | total number of processed events: 400 (read)
[2025-04-30 07:30:42] 2025-04-30 05:30:18,271 | INFO     | executing command: lscpu
[2025-04-30 07:30:42] 2025-04-30 05:30:18,293 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-30 07:30:42] 2025-04-30 05:30:18,893 | WARNING  | process 2057530 can no longer be monitored (due to stat problems) - aborting
[2025-04-30 07:30:42] 2025-04-30 05:30:18,893 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6623663989/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 07:30:42] 2025-04-30 05:30:18,894 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6623663989/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 07:30:42] 2025-04-30 05:30:18,895 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2913003 B
[2025-04-30 07:30:42] 2025-04-30 05:30:18,895 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15795 B
[2025-04-30 07:30:42] 2025-04-30 05:30:18,895 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-04-30 07:30:42] 2025-04-30 05:30:22,083 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-30 07:30:42] 2025-04-30 05:30:22,084 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6623663989/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 07:30:42] 2025-04-30 05:30:22,085 | INFO     | extracted standard info from prmon json
[2025-04-30 07:30:42] 2025-04-30 05:30:22,085 | INFO     | extracted standard memory fields from prmon json
[2025-04-30 07:30:42] 2025-04-30 05:30:22,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-30 07:30:42] 2025-04-30 05:30:22,086 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-30 07:30:42] 2025-04-30 05:30:22,086 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-30 07:30:42] 2025-04-30 05:30:22,095 | INFO     | fitting pss+swap vs Time
[2025-04-30 07:30:42] 2025-04-30 05:30:22,096 | INFO     | sum of square deviations: 26400495.0
[2025-04-30 07:30:42] 2025-04-30 05:30:22,096 | INFO     | sum of deviations: -4144909496.0
[2025-04-30 07:30:42] 2025-04-30 05:30:22,096 | INFO     | mean x: 1745989556.5
[2025-04-30 07:30:42] 2025-04-30 05:30:22,097 | INFO     | sufficient remaining disk space (60012101632 B)
[2025-04-30 07:30:42] 2025-04-30 05:30:22,097 | INFO     | mean y: 2630292.227272727
[2025-04-30 07:30:42] 2025-04-30 05:30:22,097 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-30 07:30:42] 2025-04-30 05:30:22,097 | INFO     | -- intersect: 274125092490.51855
[2025-04-30 07:30:42] 2025-04-30 05:30:22,098 | INFO     | intersect: 274125092490.51855
[2025-04-30 07:30:42] 2025-04-30 05:30:22,098 | INFO     | chi2: 0.02290463291617987
[2025-04-30 07:30:42] 2025-04-30 05:30:22,098 | INFO     | -- intersect: 274125092490.51855
[2025-04-30 07:30:42] 2025-04-30 05:30:22,099 | INFO     | current memory leak: -157.00 B/s (using 44 data points, chi2=0.02)
[2025-04-30 07:30:42] 2025-04-30 05:30:22,100 | INFO     | ..............................
[2025-04-30 07:30:42] 2025-04-30 05:30:22,100 | INFO     | . Timing measurements:
[2025-04-30 07:30:42] 2025-04-30 05:30:22,100 | INFO     | size of work directory /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6623663989: 3200402 B (within 2537553920 B limit)
[2025-04-30 07:30:42] 2025-04-30 05:30:22,100 | INFO     | . get job = 0 s
[2025-04-30 07:30:42] 2025-04-30 05:30:22,100 | INFO     | pfn file=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6623663989/HITS.44456553._000025.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-30 07:30:42] 2025-04-30 05:30:22,101 | INFO     | . initial setup = 1 s
[2025-04-30 07:30:42] 2025-04-30 05:30:22,101 | INFO     | total size of present files: 0 B (workdir size: 3200402 B)
[2025-04-30 07:30:42] 2025-04-30 05:30:22,101 | INFO     | . payload setup = 3 s
[2025-04-30 07:30:42] 2025-04-30 05:30:22,101 | INFO     | . stage-in = 0 s
[2025-04-30 07:30:42] 2025-04-30 05:30:22,101 | INFO     | output file size check: skipping output file /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6623663989/HITS.44456553._000025.pool.root.1 since it does not exist
[2025-04-30 07:30:42] 2025-04-30 05:30:22,102 | INFO     | . payload execution = 3072 s
[2025-04-30 07:30:42] 2025-04-30 05:30:22,102 | INFO     | . stage-out = 0 s
[2025-04-30 07:30:42] 2025-04-30 05:30:22,102 | INFO     | . log creation = 0 s
[2025-04-30 07:30:42] 2025-04-30 05:30:22,102 | INFO     | ..............................
[2025-04-30 07:30:42] 2025-04-30 05:30:22,152 | INFO     | 
[2025-04-30 07:30:42] 2025-04-30 05:30:22,152 | INFO     | job summary report
[2025-04-30 07:30:42] 2025-04-30 05:30:22,152 | INFO     | --------------------------------------------------
[2025-04-30 07:30:42] 2025-04-30 05:30:22,152 | INFO     | PanDA job id: 6623663989
[2025-04-30 07:30:42] 2025-04-30 05:30:22,153 | INFO     | task id: 44456553
[2025-04-30 07:30:42] 2025-04-30 05:30:22,153 | INFO     | errors: (none)
[2025-04-30 07:30:42] 2025-04-30 05:30:22,153 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-30 07:30:42] 2025-04-30 05:30:22,153 | INFO     | pilot state: finished 
[2025-04-30 07:30:42] 2025-04-30 05:30:22,153 | INFO     | transexitcode: 0
[2025-04-30 07:30:42] 2025-04-30 05:30:22,153 | INFO     | exeerrorcode: 0
[2025-04-30 07:30:42] 2025-04-30 05:30:22,153 | INFO     | exeerrordiag: 
[2025-04-30 07:30:42] 2025-04-30 05:30:22,153 | INFO     | exitcode: 0
[2025-04-30 07:30:42] 2025-04-30 05:30:22,153 | INFO     | exitmsg: OK
[2025-04-30 07:30:42] 2025-04-30 05:30:22,154 | INFO     | cpuconsumptiontime: 11087 s
[2025-04-30 07:30:42] 2025-04-30 05:30:22,154 | INFO     | nevents: 400
[2025-04-30 07:30:42] 2025-04-30 05:30:22,154 | INFO     | neventsw: 0
[2025-04-30 07:30:42] 2025-04-30 05:30:22,154 | INFO     | pid: 2057530
[2025-04-30 07:30:42] 2025-04-30 05:30:22,154 | INFO     | pgrp: 2057530
[2025-04-30 07:30:42] 2025-04-30 05:30:22,154 | INFO     | corecount: 4
[2025-04-30 07:30:42] 2025-04-30 05:30:22,154 | INFO     | event service: False
[2025-04-30 07:30:42] 2025-04-30 05:30:22,154 | INFO     | sizes: {0: 2393726, 3: 2393932, 11: 2393960, 3080: 2419366, 3081: 2428335, 3082: 2428391, 3088: 2428717}
[2025-04-30 07:30:42] 2025-04-30 05:30:22,155 | INFO     | --------------------------------------------------
[2025-04-30 07:30:42] 2025-04-30 05:30:22,155 | INFO     | 
[2025-04-30 07:30:42] 2025-04-30 05:30:22,155 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2025-04-30 07:30:42] 2025-04-30 05:30:22,170 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,170 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,170 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,170 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,170 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,170 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,170 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | job 6623663989 has completed (purged errors)
[2025-04-30 07:30:42] 2025-04-30 05:30:22,171 | INFO     | overall cleanup function is called
[2025-04-30 07:30:42] 2025-04-30 05:30:22,248 | INFO     | number of running child processes to parent process 2057530: 1
[2025-04-30 07:30:42] 2025-04-30 05:30:22,248 | INFO     | maximum number of monitored processes: 6
[2025-04-30 07:30:42] 2025-04-30 05:30:22,248 | INFO     | aborting job monitoring since job object (job id=6623663989) has expired
[2025-04-30 07:30:42] 2025-04-30 05:30:22,656 | INFO     | PID=2051003 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-30 07:30:42] 2025-04-30 05:30:22,656 | INFO     | .. there are 2 such processes running
[2025-04-30 07:30:42] 2025-04-30 05:30:23,178 | INFO     | --- collectZombieJob: --- 10, [2057530]
[2025-04-30 07:30:42] 2025-04-30 05:30:23,178 | INFO     | zombie collector waiting for pid 2057530
[2025-04-30 07:30:42] 2025-04-30 05:30:23,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-30 07:30:42] 2025-04-30 05:30:23,178 | INFO     | collected zombie processes
[2025-04-30 07:30:42] 2025-04-30 05:30:23,179 | INFO     | will attempt to kill all subprocesses of pid=2057530
[2025-04-30 07:30:42] 2025-04-30 05:30:23,269 | INFO     | process IDs to be killed: [2057530] (in reverse order)
[2025-04-30 07:30:42] 2025-04-30 05:30:23,302 | WARNING  | found no corresponding commands to process id(s)
[2025-04-30 07:30:42] 2025-04-30 05:30:23,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-30 07:30:42] 2025-04-30 05:30:23,309 | INFO     | did not find any defunct processes belonging to 2057530
[2025-04-30 07:30:42] 2025-04-30 05:30:23,313 | INFO     | did not find any defunct processes belonging to 2057530
[2025-04-30 07:30:42] 2025-04-30 05:30:23,313 | INFO     | ready for new job
[2025-04-30 07:30:42] 2025-04-30 05:30:23,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-30 07:30:42] 2025-04-30 05:30:23,314 | INFO     | **************************************
[2025-04-30 07:30:42] 2025-04-30 05:30:23,314 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-30 07:30:42] 2025-04-30 05:30:23,314 | INFO     | **************************************
[2025-04-30 07:30:42] 2025-04-30 05:30:23,314 | INFO     | 
[2025-04-30 07:30:42] 2025-04-30 05:30:23,315 | INFO     | pilot is running in a VM
[2025-04-30 07:30:42] 2025-04-30 05:30:23,315 | INFO     | architecture information:
[2025-04-30 07:30:42] 2025-04-30 05:30:23,315 | INFO     | executing command: cat /etc/os-release
[2025-04-30 07:30:42] 2025-04-30 05:30:23,325 | INFO     | cat /etc/os-release:
[2025-04-30 07:30:42] NAME="CentOS Linux"
[2025-04-30 07:30:42] VERSION="7 (Core)"
[2025-04-30 07:30:42] ID="centos"
[2025-04-30 07:30:42] ID_LIKE="rhel fedora"
[2025-04-30 07:30:42] VERSION_ID="7"
[2025-04-30 07:30:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-30 07:30:42] ANSI_COLOR="0;31"
[2025-04-30 07:30:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-30 07:30:42] HOME_URL="https://www.centos.org/"
[2025-04-30 07:30:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-30 07:30:42] 
[2025-04-30 07:30:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-30 07:30:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-30 07:30:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-30 07:30:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-30 07:30:42] 
[2025-04-30 07:30:42] 2025-04-30 05:30:23,325 | INFO     | **************************************
[2025-04-30 07:30:42] 2025-04-30 05:30:23,828 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-04-30 07:30:42] 2025-04-30 05:30:23,840 | INFO     | sufficient remaining disk space (60015247360 B)
[2025-04-30 07:30:42] 2025-04-30 05:30:23,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-30 07:30:42] 2025-04-30 05:30:23,840 | INFO     | current server update state: UPDATING_FINAL
[2025-04-30 07:30:42] 2025-04-30 05:30:23,840 | INFO     | update_server=False
[2025-04-30 07:30:42] 2025-04-30 05:30:23,840 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-30 07:30:42] 2025-04-30 05:30:23,840 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-30 07:30:42] 2025-04-30 05:30:23,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-30 07:30:42] 2025-04-30 05:30:23,841 | INFO     | aborting loop
[2025-04-30 07:30:42] 2025-04-30 05:30:23,968 | INFO     | all payload control threads have been joined
[2025-04-30 07:30:42] 2025-04-30 05:30:24,662 | INFO     | found 0 job(s) in 20 queues
[2025-04-30 07:30:42] 2025-04-30 05:30:24,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-30 07:30:42] 2025-04-30 05:30:24,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-30 07:30:42] 2025-04-30 05:30:24,733 | INFO     | all data control threads have been joined
[2025-04-30 07:30:42] 2025-04-30 05:30:24,846 | INFO     | [job] retrieve thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:24,846 | INFO     | [job] queue monitor thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:24,847 | INFO     | [job] job monitor thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:24,971 | INFO     | [payload] execute_payloads thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:24,974 | INFO     | [payload] control thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:25,036 | INFO     | [data] copytool_in thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:25,072 | INFO     | all job control threads have been joined
[2025-04-30 07:30:42] 2025-04-30 05:30:25,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-30 07:30:42] 2025-04-30 05:30:25,407 | INFO     | [job] validate thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:25,419 | INFO     | [job] create_data_payload thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:25,479 | INFO     | [payload] failed_post thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:25,727 | INFO     | [payload] validate_post thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:25,738 | INFO     | [data] control thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:25,786 | INFO     | [payload] validate_pre thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:26,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-30 07:30:42] 2025-04-30 05:30:26,077 | INFO     | [job] control thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:27,218 | INFO     | [data] copytool_out thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:30,058 | INFO     | [data] queue_monitor thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:34,852 | INFO     | job.realtimelogging is not enabled
[2025-04-30 07:30:42] 2025-04-30 05:30:35,857 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-30 07:30:42] 2025-04-30 05:30:37,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124792810522432)>', '<ExcThread(monitor, started 124792285955840)>']
[2025-04-30 07:30:42] 2025-04-30 05:30:37,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-30 07:30:42] 2025-04-30 05:30:37,701 | INFO     | [monitor] control thread has ended
[2025-04-30 07:30:42] 2025-04-30 05:30:42,423 | INFO     | all workflow threads have been joined
[2025-04-30 07:30:42] 2025-04-30 05:30:42,424 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-30 07:30:42] 2025-04-30 05:30:42,424 | INFO     | traces error code: 0
[2025-04-30 07:30:42] 2025-04-30 05:30:42,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-30 07:30:42] 2025-04-30 05:30:42,494 [wrapper] ==== pilot stdout END ====
[2025-04-30 07:30:42] 2025-04-30 05:30:42,499 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-30 07:30:42] 2025-04-30 05:30:42,503 [wrapper] pilotpid: 2051003
[2025-04-30 07:30:42] 2025-04-30 05:30:42,508 [wrapper] Pilot exit status: 0
[2025-04-30 07:30:42] 2025-04-30 05:30:42,523 [wrapper] pandaids: 6623663989
[2025-04-30 07:30:42] 2025-04-30 05:30:42,547 [wrapper] cleanup supervisor_pilot 2088861 2051004
[2025-04-30 07:30:42] 2025-04-30 05:30:42,550 [wrapper] Test setup, not cleaning
[2025-04-30 07:30:42] 2025-04-30 05:30:42,554 [wrapper] apfmon messages muted
[2025-04-30 07:30:42] 2025-04-30 05:30:42,558 [wrapper] ==== wrapper stdout END ====
[2025-04-30 07:30:42] 2025-04-30 05:30:42,561 [wrapper] ==== wrapper stderr END ====
[2025-04-30 07:30:42]  *** Error codes and diagnostics ***
[2025-04-30 07:30:42]     "exeErrorCode": 0,
[2025-04-30 07:30:42]     "exeErrorDiag": "",
[2025-04-30 07:30:42]     "pilotErrorCode": 0,
[2025-04-30 07:30:42]     "pilotErrorDiag": "",
[2025-04-30 07:30:42]  *** Listing of results directory ***
[2025-04-30 07:30:42] insgesamt 432720
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc    495897 Apr 29 17:33 pilot3.tar.gz
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc      5111 Apr 29 17:34 queuedata.json
[2025-04-30 07:30:42] -rwx------ 1 yeti boinc     37140 Apr 29 17:34 runpilot2-wrapper.sh
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc       100 Apr 30 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-30 07:30:42] -rwxr-xr-x 1 yeti boinc      7986 Apr 30 06:38 run_atlas
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc       105 Apr 30 06:38 job.xml
[2025-04-30 07:30:42] drwxrwx--x 2 yeti boinc      4096 Apr 30 06:38 shared
[2025-04-30 07:30:42] -rw-r--r-- 2 yeti boinc    508883 Apr 30 06:38 input.tar.gz
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc      6653 Apr 30 06:38 init_data.xml
[2025-04-30 07:30:42] -rw-r--r-- 2 yeti boinc 316291248 Apr 30 06:38 EVNT.42273522._000001.pool.root.1
[2025-04-30 07:30:42] -rw-r--r-- 2 yeti boinc     17569 Apr 30 06:38 start_atlas.sh
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc         0 Apr 30 06:38 boinc_lockfile
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc      2577 Apr 30 06:38 pandaJob.out
[2025-04-30 07:30:42] -rw------- 1 yeti boinc       462 Apr 30 06:38 setup.sh.local
[2025-04-30 07:30:42] -rw------- 1 yeti boinc    990392 Apr 30 06:38 agis_schedconf.cvmfs.json
[2025-04-30 07:30:42] -rw------- 1 yeti boinc   1596659 Apr 30 06:38 agis_ddmendpoints.agis.ALL.json
[2025-04-30 07:30:42] drwx------ 4 yeti boinc      4096 Apr 30 06:38 pilot3
[2025-04-30 07:30:42] -rw------- 1 yeti boinc 121806580 Apr 30 07:29 HITS.44456553._000025.pool.root.1
[2025-04-30 07:30:42] -rw------- 1 yeti boinc        95 Apr 30 07:30 pilot_heartbeat.json
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc       530 Apr 30 07:30 boinc_task_state.xml
[2025-04-30 07:30:42] -rw------- 1 yeti boinc      1026 Apr 30 07:30 memory_monitor_summary.json
[2025-04-30 07:30:42] -rw------- 1 yeti boinc    245865 Apr 30 07:30 log.44456553._000025.job.log.tgz.1
[2025-04-30 07:30:42] -rw------- 1 yeti boinc      7660 Apr 30 07:30 heartbeat.json
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc        27 Apr 30 07:30 wrapper_checkpoint.txt
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc      8192 Apr 30 07:30 boinc_mmap_file
[2025-04-30 07:30:42] -rw------- 1 yeti boinc      4501 Apr 30 07:30 pilotlog.txt
[2025-04-30 07:30:42] -rw------- 1 yeti boinc    334785 Apr 30 07:30 log.44456553._000025.job.log.1
[2025-04-30 07:30:42] -rw------- 1 yeti boinc       357 Apr 30 07:30 output.list
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc       620 Apr 30 07:30 runtime_log
[2025-04-30 07:30:42] -rw------- 1 yeti boinc    604160 Apr 30 07:30 result.tar.gz
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc     11616 Apr 30 07:30 runtime_log.err
[2025-04-30 07:30:42] -rw------- 1 yeti boinc       638 Apr 30 07:30 9U3MDmBA2T7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmdmDLDmCydV6m.diag
[2025-04-30 07:30:42] -rw-r--r-- 1 yeti boinc     22233 Apr 30 07:30 stderr.txt
[2025-04-30 07:30:42] HITS file was successfully produced:
[2025-04-30 07:30:42] -rw------- 1 yeti boinc 121806580 Apr 30 07:29 shared/HITS.pool.root.1
[2025-04-30 07:30:42]  *** Contents of shared directory: ***
[2025-04-30 07:30:42] insgesamt 428952
[2025-04-30 07:30:42] -rw-r--r-- 2 yeti boinc    508883 Apr 30 06:38 input.tar.gz
[2025-04-30 07:30:42] -rw-r--r-- 2 yeti boinc 316291248 Apr 30 06:38 ATLAS.root_0
[2025-04-30 07:30:42] -rw-r--r-- 2 yeti boinc     17569 Apr 30 06:38 start_atlas.sh
[2025-04-30 07:30:42] -rw------- 1 yeti boinc 121806580 Apr 30 07:29 HITS.pool.root.1
[2025-04-30 07:30:42] -rw------- 1 yeti boinc    604160 Apr 30 07:30 result.tar.gz
07:30:43 (2047293): run_atlas exited; CPU time 11124.884459
07:30:43 (2047293): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN