Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-30 03:13:06 (2868): Detected: vboxwrapper 26206
2025-04-30 03:13:06 (2868): Detected: BOINC client v8.0.2
2025-04-30 03:13:06 (2868): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-04-30 03:13:07 (2868): Successfully copied 'init_data.xml' to the shared directory.
2025-04-30 03:13:07 (2868): Create VM. (boinc_3b5e1542a0523466, slot#7)
2025-04-30 03:13:08 (2868): Setting Memory Size for VM. (4300MB)
2025-04-30 03:13:08 (2868): Setting CPU Count for VM. (3)
2025-04-30 03:13:08 (2868): Setting Chipset Options for VM.
2025-04-30 03:13:09 (2868): Setting Graphics Controller Options for VM.
2025-04-30 03:13:09 (2868): Setting Boot Options for VM.
2025-04-30 03:13:09 (2868): Setting Network Configuration for NAT.
2025-04-30 03:13:10 (2868): Enabling VM Network Access.
2025-04-30 03:13:10 (2868): Disabling USB Support for VM.
2025-04-30 03:13:10 (2868): Disabling COM Port Support for VM.
2025-04-30 03:13:10 (2868): Disabling LPT Port Support for VM.
2025-04-30 03:13:11 (2868): Disabling Audio Support for VM.
2025-04-30 03:13:11 (2868): Disabling Clipboard Support for VM.
2025-04-30 03:13:12 (2868): Disabling Drag and Drop Support for VM.
2025-04-30 03:13:12 (2868): Adding storage controller(s) to VM.
2025-04-30 03:13:12 (2868): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-30 03:13:13 (2868): Adding VirtualBox Guest Additions to VM.
2025-04-30 03:13:13 (2868): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-30 03:13:13 (2868): forwarding host port 64556 to guest port 80
2025-04-30 03:13:14 (2868): Enabling remote desktop for VM.
2025-04-30 03:13:14 (2868): Required extension pack not installed, remote desktop not enabled.
2025-04-30 03:13:14 (2868): Enabling shared directory for VM.
2025-04-30 03:13:14 (2868): Starting VM using VBoxManage interface. (boinc_3b5e1542a0523466, slot#7)
2025-04-30 03:13:20 (2868): Successfully started VM. (PID = '7088')
2025-04-30 03:13:20 (2868): Reporting VM Process ID to BOINC.
2025-04-30 03:13:20 (2868): Guest Log: BIOS: VirtualBox 7.1.8
2025-04-30 03:13:20 (2868): Guest Log: CPUID EDX: 0x178bfbff
2025-04-30 03:13:20 (2868): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-30 03:13:20 (2868): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-30 03:13:20 (2868): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-30 03:13:20 (2868): Detected: Web Application Enabled (http://localhost:64556)
2025-04-30 03:13:20 (2868): Preference change detected
2025-04-30 03:13:20 (2868): Setting CPU throttle for VM. (100%)
2025-04-30 03:13:20 (2868): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-30 03:13:22 (2868): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-30 03:13:22 (2868): Guest Log: BIOS: Booting from Hard Disk...
2025-04-30 03:13:28 (2868): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-30 03:13:28 (2868): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-30 03:13:28 (2868): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-30 03:13:43 (2868): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-30 03:13:43 (2868): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-30 03:14:01 (2868): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-30 03:14:01 (2868): Guest Log: 00:00:00.000126 main     Log opened 2025-04-30T03:13:59.534851000Z
2025-04-30 03:14:01 (2868): Guest Log: 00:00:00.000246 main     OS Product: Linux
2025-04-30 03:14:01 (2868): Guest Log: 00:00:00.000267 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-30 03:14:01 (2868): Guest Log: 00:00:00.000282 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-30 03:14:01 (2868): Guest Log: 00:00:00.000296 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-30 03:14:01 (2868): Guest Log: 00:00:00.000297 main     Process ID: 1296
2025-04-30 03:14:01 (2868): Guest Log: 00:00:00.000297 main     Package type: LINUX_64BITS_GENERIC
2025-04-30 03:14:01 (2868): Guest Log: 00:00:00.051719 main     5.2.32 r132073 started. Verbose level = 0
2025-04-30 03:14:01 (2868): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-30 03:14:01 (2868): Guest Log: [INFO] Mounting shared directory
2025-04-30 03:14:01 (2868): Guest Log: [INFO] Checking for init_data.xml
2025-04-30 03:14:09 (2868): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-30 03:14:09 (2868): Guest Log: [INFO] Detected branch: prod
2025-04-30 03:14:10 (2868): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-30 03:14:10 (2868): Guest Log: Copying input files
2025-04-30 03:14:11 (2868): Guest Log: 00:00:10.066349 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 526 628 000ns (GuestNow=1 745 975 651 071 202 000 ns GuestLast=1 745 982 839 597 830 000 ns fSetTimeLastLoop=true )
2025-04-30 03:14:33 (2868): Guest Log: Copied input files into RunAtlas.
2025-04-30 03:14:34 (2868): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-30 03:14:34 (2868): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-30 03:14:34 (2868): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-30 03:14:34 (2868): Guest Log: Further information can be found at the LHC@home message board.
2025-04-30 03:14:52 (2868): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-30 03:14:53 (2868): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-30 03:14:53 (2868): Guest Log: 2.6.3.0 1591 0 30108 145434 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-30 03:14:55 (2868): Guest Log: copied the webapp to /var/www
2025-04-30 03:14:55 (2868): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-30 03:14:55 (2868): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-30 03:14:56 (2868): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-30 03:14:56 (2868): Guest Log:  *** Starting ATLAS job. (PandaID=6623658590 taskID=44456373) ***
2025-04-30 04:54:41 (2868): Status Report: Elapsed Time: '6000.000000'
2025-04-30 04:54:41 (2868): Status Report: CPU Time: '14145.515625'
2025-04-30 05:19:22 (2868): Guest Log:  *** Job finished ***
2025-04-30 05:19:22 (2868): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:17,716 | INFO     | [payload] run_realtimelog thread has finished
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:17,823 | INFO     | [job] control thread has finished
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:19,386 | INFO     | [data] queue_monitor thread has finished
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:21,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667600336704)>', '<ExcThread(monitor, started 139666497992448)>']
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:22,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:22,040 | INFO     | [monitor] control thread has ended
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,048 | INFO     | all workflow threads have been joined
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,049 | INFO     | end of generic workflow (traces error code: 0)
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,049 | INFO     | traces error code: 0
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,122 [wrapper] ==== pilot stdout END ====
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,125 [wrapper] ==== wrapper stdout RESUME ====
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,128 [wrapper] pilotpid: 5930
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,131 [wrapper] Pilot exit status: 0
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,398 [wrapper] pandaids: 6623658590
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,413 [wrapper] cleanup supervisor_pilot  3418 5931
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,415 [wrapper] Test setup, not cleaning
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,418 [wrapper] apfmon messages muted
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,420 [wrapper] ==== wrapper stdout END ====
2025-04-30 05:19:22 (2868): Guest Log: 2025-04-30 03:19:26,422 [wrapper] ==== wrapper stderr END ====
2025-04-30 05:19:22 (2868): Guest Log:  *** Error codes and diagnostics ***
2025-04-30 05:19:22 (2868): Guest Log:     "exeErrorCode": 0,
2025-04-30 05:19:22 (2868): Guest Log:     "exeErrorDiag": "",
2025-04-30 05:19:22 (2868): Guest Log:     "pilotErrorCode": 0,
2025-04-30 05:19:22 (2868): Guest Log:     "pilotErrorDiag": "",
2025-04-30 05:19:22 (2868): Guest Log:  *** Listing of results directory ***
2025-04-30 05:19:22 (2868): Guest Log: total 154784
2025-04-30 05:19:22 (2868): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 29 13:07 pilot3.tar.gz
2025-04-30 05:19:22 (2868): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 29 13:23 queuedata.json
2025-04-30 05:19:22 (2868): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 29 13:24 runpilot2-wrapper.sh
2025-04-30 05:19:22 (2868): Guest Log: -rwxr-xr-x. 1 atlas atlas      9072 Apr 30 01:14 init_data.xml
2025-04-30 05:19:22 (2868): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 Apr 30 01:14 input.tar.gz
2025-04-30 05:19:22 (2868): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 30 01:14 start_atlas.sh
2025-04-30 05:19:22 (2868): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 30 01:14 EVNT.42272610._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-04-30 05:19:22 (2868): Guest Log: -rw-r--r--. 1 atlas atlas      2585 Apr 30 01:14 pandaJob.out
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas       424 Apr 30 01:15 setup.sh.local
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas    990778 Apr 30 01:18 agis_schedconf.cvmfs.json
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 30 01:18 agis_ddmendpoints.agis.ALL.json
2025-04-30 05:19:22 (2868): Guest Log: drwx------. 4 atlas atlas      4096 Apr 30 01:18 pilot3
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas 152948714 Apr 30 03:18 HITS.44456373._000004.pool.root.1
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas      1025 Apr 30 03:18 memory_monitor_summary.json
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas        95 Apr 30 03:18 pilot_heartbeat.json
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas    238895 Apr 30 03:19 log.44456373._000004.job.log.tgz.1
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas      7662 Apr 30 03:19 heartbeat.json
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 30 03:19 pilotlog.txt
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas    649714 Apr 30 03:19 log.44456373._000004.job.log.1
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas       357 Apr 30 03:19 output.list
2025-04-30 05:19:22 (2868): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 30 03:19 runtime_log
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas    911360 Apr 30 03:19 result.tar.gz
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas       644 Apr 30 03:19 yncKDmw7zT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmk8wLDmYmjG3m.diag
2025-04-30 05:19:22 (2868): Guest Log: -rw-r--r--. 1 atlas atlas     10901 Apr 30 03:19 runtime_log.err
2025-04-30 05:19:22 (2868): Guest Log: Looking for outputfile HITS.44456373._000004.pool.root.1
2025-04-30 05:19:22 (2868): Guest Log: HITS file was successfully produced
2025-04-30 05:19:22 (2868): Guest Log: -rw-------. 1 atlas atlas 152948714 Apr 30 03:18 /home/atlas/RunAtlas/HITS.44456373._000004.pool.root.1
2025-04-30 05:19:22 (2868): Guest Log: Successfully finished the ATLAS job!
2025-04-30 05:19:22 (2868): Guest Log: Copying the results back to the shared directory!
2025-04-30 05:19:22 (2868): Guest Log:  *** Contents of shared directory: ***
2025-04-30 05:19:22 (2868): Guest Log: total 522072
2025-04-30 05:19:22 (2868): Guest Log: -rwxrwxrwx. 1 root root 380192069 Apr 30 01:13 ATLAS.root_0
2025-04-30 05:19:22 (2868): Guest Log: -rwxrwxrwx. 1 root root 152948714 Apr 30 03:19 HITS.pool.root.1
2025-04-30 05:19:22 (2868): Guest Log: -rwxrwxrwx. 1 root root      9072 Apr 30 01:13 init_data.xml
2025-04-30 05:19:22 (2868): Guest Log: -rwxrwxrwx. 1 root root    508880 Apr 30 00:54 input.tar.gz
2025-04-30 05:19:22 (2868): Guest Log: -rwxrwxrwx. 1 root root    911360 Apr 30 03:19 result.tar.gz
2025-04-30 05:19:22 (2868): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 30 00:54 start_atlas.sh
2025-04-30 05:19:22 (2868): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-30 05:19:22 (2868): VM Completion File Detected.
2025-04-30 05:19:22 (2868): Powering off VM.
2025-04-30 05:19:22 (2868): Successfully stopped VM.
2025-04-30 05:19:22 (2868): Deregistering VM. (boinc_3b5e1542a0523466, slot#7)
2025-04-30 05:19:22 (2868): Removing network bandwidth throttle group from VM.
2025-04-30 05:19:23 (2868): Removing VM from VirtualBox.
05:19:28 (2868): called boinc_finish(0)

</stderr_txt>
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