Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:52:47 (420347): wrapper (7.7.26015): starting
18:52:47 (420347): wrapper: running run_atlas (--nthreads 8)
[2025-04-29 18:52:47] Arguments: --nthreads 8
[2025-04-29 18:52:47] Threads: 8
[2025-04-29 18:52:47] Checking for CVMFS
[2025-04-29 18:52:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 18:52:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 18:52:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 18:52:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 18:52:50] 2.12.6.0 2076380 26343 239492 145432 0 287 28548819 32935936 22123 16776704 1 131259120 99.512 159961277 20316 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-29 18:52:50] CVMFS is ok
[2025-04-29 18:52:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-29 18:52:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-29 18:52:50] Further information can be found at the LHC@home message board.
[2025-04-29 18:52:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 18:52:50] Checking for apptainer binary...
[2025-04-29 18:52:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-29 18:52:50] Running /usr/bin/apptainer --version
[2025-04-29 18:52:50] apptainer version 1.4.0-1.el9
[2025-04-29 18:52:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 18:52:50] c6-2-11-4.aglt2.org
[2025-04-29 18:52:50] apptainer works
[2025-04-29 18:52:50] Set ATHENA_PROC_NUMBER=8
[2025-04-29 18:52:50] Set ATHENA_CORE_NUMBER=8
[2025-04-29 18:52:50] Starting ATLAS job with PandaID=6621016827
[2025-04-29 18:52:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-30 00:40:14]  *** The last 200 lines of the pilot log: ***
[2025-04-30 00:40:14] 2025-04-30 04:39:26,355 | INFO     | monitor loop #1178: job 0:6621016827 is in state 'finished'
[2025-04-30 00:40:14] 2025-04-30 04:39:26,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-30 00:40:14] 2025-04-30 04:39:28,871 | INFO     | monitor loop #1179: job 0:6621016827 is in state 'finished'
[2025-04-30 00:40:14] 2025-04-30 04:39:28,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-30 00:40:14] 2025-04-30 04:39:31,386 | INFO     | monitor loop #1180: job 0:6621016827 is in state 'finished'
[2025-04-30 00:40:14] 2025-04-30 04:39:31,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-30 00:40:14] 2025-04-30 04:39:33,317 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-30 00:40:14] 2025-04-30 04:39:33,318 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6621016827/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 00:40:14] 2025-04-30 04:39:33,319 | INFO     | extracted standard info from prmon json
[2025-04-30 00:40:14] 2025-04-30 04:39:33,319 | INFO     | extracted standard memory fields from prmon json
[2025-04-30 00:40:14] 2025-04-30 04:39:33,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-30 00:40:14] 2025-04-30 04:39:33,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-30 00:40:14] 2025-04-30 04:39:33,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-30 00:40:14] 2025-04-30 04:39:33,363 | INFO     | fitting pss+swap vs Time
[2025-04-30 00:40:14] 2025-04-30 04:39:33,364 | INFO     | sum of square deviations: 11868052426.106825
[2025-04-30 00:40:14] 2025-04-30 04:39:33,390 | INFO     | sum of deviations: 255714724285.1958
[2025-04-30 00:40:14] 2025-04-30 04:39:33,390 | INFO     | mean x: 1745977622.3649852
[2025-04-30 00:40:14] 2025-04-30 04:39:33,390 | INFO     | mean y: 2130383.169139466
[2025-04-30 00:40:14] 2025-04-30 04:39:33,391 | INFO     | -- intersect: -37617537131.026695
[2025-04-30 00:40:14] 2025-04-30 04:39:33,391 | INFO     | intersect: -37617537131.026695
[2025-04-30 00:40:14] 2025-04-30 04:39:33,391 | INFO     | chi2: 7.882783994624399
[2025-04-30 00:40:14] 2025-04-30 04:39:33,392 | INFO     | sum of square deviations: 11347631962.16859
[2025-04-30 00:40:14] 2025-04-30 04:39:33,416 | INFO     | sum of deviations: 292876669663.4095
[2025-04-30 00:40:14] 2025-04-30 04:39:33,416 | INFO     | mean x: 1745977469.8674698
[2025-04-30 00:40:14] 2025-04-30 04:39:33,416 | INFO     | mean y: 2141173.2138554216
[2025-04-30 00:40:14] 2025-04-30 04:39:33,416 | INFO     | -- intersect: -45060658570.99002
[2025-04-30 00:40:14] 2025-04-30 04:39:33,416 | INFO     | intersect: -45060658570.99002
[2025-04-30 00:40:14] 2025-04-30 04:39:33,417 | INFO     | chi2: 6.346766723233001
[2025-04-30 00:40:14] 2025-04-30 04:39:33,417 | INFO     | current chi2=6.346766723233001 (change=19.485720684961965 %)
[2025-04-30 00:40:14] 2025-04-30 04:39:33,417 | INFO     | right removable region: 331
[2025-04-30 00:40:14] 2025-04-30 04:39:33,417 | INFO     | sum of square deviations: 11347577245.43077
[2025-04-30 00:40:14] 2025-04-30 04:39:33,467 | INFO     | sum of deviations: 174627210955.0241
[2025-04-30 00:40:14] 2025-04-30 04:39:33,467 | INFO     | mean x: 1745977774.870482
[2025-04-30 00:40:14] 2025-04-30 04:39:33,467 | INFO     | mean y: 2154103.3493975904
[2025-04-30 00:40:14] 2025-04-30 04:39:33,467 | INFO     | -- intersect: -26866597051.251534
[2025-04-30 00:40:14] 2025-04-30 04:39:33,467 | INFO     | intersect: -26866597051.251534
[2025-04-30 00:40:14] 2025-04-30 04:39:33,468 | INFO     | chi2: 4.953157062083827
[2025-04-30 00:40:14] 2025-04-30 04:39:33,468 | INFO     | current chi2=4.953157062083827 (change=37.16487645149743 %)
[2025-04-30 00:40:14] 2025-04-30 04:39:33,468 | INFO     | sum of square deviations: 10842544214.733904
[2025-04-30 00:40:14] 2025-04-30 04:39:33,489 | INFO     | sum of deviations: 123188401233.76158
[2025-04-30 00:40:14] 2025-04-30 04:39:33,489 | INFO     | mean x: 1745977927.3761468
[2025-04-30 00:40:14] 2025-04-30 04:39:33,490 | INFO     | mean y: 2169628.96941896
[2025-04-30 00:40:14] 2025-04-30 04:39:33,490 | INFO     | -- intersect: -19834893075.430428
[2025-04-30 00:40:14] 2025-04-30 04:39:33,490 | INFO     | intersect: -19834893075.430428
[2025-04-30 00:40:14] 2025-04-30 04:39:33,490 | INFO     | chi2: 3.9130324333725017
[2025-04-30 00:40:14] 2025-04-30 04:39:33,490 | INFO     | current chi2=3.9130324333725017 (change=20.999225658992888 %)
[2025-04-30 00:40:14] 2025-04-30 04:39:33,490 | INFO     | left removable region: 20
[2025-04-30 00:40:14] 2025-04-30 04:39:33,491 | INFO     | sum of square deviations: 9327571758.14146
[2025-04-30 00:40:14] 2025-04-30 04:39:33,514 | INFO     | sum of deviations: 81717679899.13823
[2025-04-30 00:40:14] 2025-04-30 04:39:33,514 | INFO     | mean x: 1745978049.392283
[2025-04-30 00:40:14] 2025-04-30 04:39:33,514 | INFO     | mean y: 2207160.9742765273
[2025-04-30 00:40:14] 2025-04-30 04:39:33,514 | INFO     | -- intersect: -15294086349.351837
[2025-04-30 00:40:14] 2025-04-30 04:39:33,514 | INFO     | intersect: -15294086349.351837
[2025-04-30 00:40:14] 2025-04-30 04:39:33,515 | INFO     | chi2: 1.066892207108034
[2025-04-30 00:40:14] 2025-04-30 04:39:33,515 | INFO     | -- intersect: -15294086349.351837
[2025-04-30 00:40:14] 2025-04-30 04:39:33,515 | INFO     | current memory leak: 8.76 B/s (using 311 data points, chi2=1.07)
[2025-04-30 00:40:14] 2025-04-30 04:39:33,516 | INFO     | ..............................
[2025-04-30 00:40:14] 2025-04-30 04:39:33,536 | INFO     | . Timing measurements:
[2025-04-30 00:40:14] 2025-04-30 04:39:33,536 | INFO     | . get job = 0 s
[2025-04-30 00:40:14] 2025-04-30 04:39:33,536 | INFO     | . initial setup = 7 s
[2025-04-30 00:40:14] 2025-04-30 04:39:33,536 | INFO     | . payload setup = 43 s
[2025-04-30 00:40:14] 2025-04-30 04:39:33,536 | INFO     | . stage-in = 0 s
[2025-04-30 00:40:14] 2025-04-30 04:39:33,536 | INFO     | . payload execution = 20572 s
[2025-04-30 00:40:14] 2025-04-30 04:39:33,537 | INFO     | . stage-out = 6 s
[2025-04-30 00:40:14] 2025-04-30 04:39:33,537 | INFO     | . log creation = 0 s
[2025-04-30 00:40:14] 2025-04-30 04:39:33,537 | INFO     | ..............................
[2025-04-30 00:40:14] 2025-04-30 04:39:34,220 | INFO     | 
[2025-04-30 00:40:14] 2025-04-30 04:39:34,220 | INFO     | job summary report
[2025-04-30 00:40:14] 2025-04-30 04:39:34,220 | INFO     | --------------------------------------------------
[2025-04-30 00:40:14] 2025-04-30 04:39:34,220 | INFO     | PanDA job id: 6621016827
[2025-04-30 00:40:14] 2025-04-30 04:39:34,220 | INFO     | task id: 44292257
[2025-04-30 00:40:14] 2025-04-30 04:39:34,220 | INFO     | errors: (none)
[2025-04-30 00:40:14] 2025-04-30 04:39:34,220 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-30 00:40:14] 2025-04-30 04:39:34,220 | INFO     | pilot state: finished 
[2025-04-30 00:40:14] 2025-04-30 04:39:34,220 | INFO     | transexitcode: 0
[2025-04-30 00:40:14] 2025-04-30 04:39:34,220 | INFO     | exeerrorcode: 0
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | exeerrordiag: 
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | exitcode: 0
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | exitmsg: OK
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | cpuconsumptiontime: 45890 s
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | nevents: 400
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | neventsw: 0
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | pid: 465208
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | pgrp: 465208
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | corecount: 8
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | event service: False
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | sizes: {0: 2393561, 1: 2393760, 12: 2393760, 24: 2393788, 33: 2394022, 35: 2394078, 20620: 2427137, 20622: 2427136, 20630: 2436189, 20670: 2436303}
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | --------------------------------------------------
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | 
[2025-04-30 00:40:14] 2025-04-30 04:39:34,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-04-30 00:40:14] 2025-04-30 04:39:34,307 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-30 00:40:14] 2025-04-30 04:39:34,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-30 00:40:14] 2025-04-30 04:39:34,310 | INFO     | job 6621016827 has completed (purged errors)
[2025-04-30 00:40:14] 2025-04-30 04:39:34,310 | INFO     | overall cleanup function is called
[2025-04-30 00:40:14] 2025-04-30 04:39:35,339 | INFO     | --- collectZombieJob: --- 10, [465208]
[2025-04-30 00:40:14] 2025-04-30 04:39:35,339 | INFO     | zombie collector waiting for pid 465208
[2025-04-30 00:40:14] 2025-04-30 04:39:35,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-30 00:40:14] 2025-04-30 04:39:35,339 | INFO     | collected zombie processes
[2025-04-30 00:40:14] 2025-04-30 04:39:35,339 | INFO     | will attempt to kill all subprocesses of pid=465208
[2025-04-30 00:40:14] 2025-04-30 04:39:37,052 | INFO     | process IDs to be killed: [465208] (in reverse order)
[2025-04-30 00:40:14] 2025-04-30 04:39:37,245 | WARNING  | found no corresponding commands to process id(s)
[2025-04-30 00:40:14] 2025-04-30 04:39:37,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-30 00:40:14] 2025-04-30 04:39:37,276 | INFO     | did not find any defunct processes belonging to 465208
[2025-04-30 00:40:14] 2025-04-30 04:39:37,309 | INFO     | did not find any defunct processes belonging to 465208
[2025-04-30 00:40:14] 2025-04-30 04:39:37,310 | INFO     | ready for new job
[2025-04-30 00:40:14] 2025-04-30 04:39:37,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-30 00:40:14] 2025-04-30 04:39:37,316 | INFO     | **************************************
[2025-04-30 00:40:14] 2025-04-30 04:39:37,316 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-30 00:40:14] 2025-04-30 04:39:37,316 | INFO     | **************************************
[2025-04-30 00:40:14] 2025-04-30 04:39:37,316 | INFO     | 
[2025-04-30 00:40:14] 2025-04-30 04:39:37,338 | INFO     | architecture information:
[2025-04-30 00:40:14] 2025-04-30 04:39:37,343 | INFO     | executing command: cat /etc/os-release
[2025-04-30 00:40:14] 2025-04-30 04:39:37,473 | INFO     | cat /etc/os-release:
[2025-04-30 00:40:14] NAME="CentOS Linux"
[2025-04-30 00:40:14] VERSION="7 (Core)"
[2025-04-30 00:40:14] ID="centos"
[2025-04-30 00:40:14] ID_LIKE="rhel fedora"
[2025-04-30 00:40:14] VERSION_ID="7"
[2025-04-30 00:40:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-30 00:40:14] ANSI_COLOR="0;31"
[2025-04-30 00:40:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-30 00:40:14] HOME_URL="https://www.centos.org/"
[2025-04-30 00:40:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-30 00:40:14] 
[2025-04-30 00:40:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-30 00:40:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-30 00:40:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-30 00:40:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-30 00:40:14] 
[2025-04-30 00:40:14] 2025-04-30 04:39:37,473 | INFO     | **************************************
[2025-04-30 00:40:14] 2025-04-30 04:39:37,977 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-04-30 00:40:14] 2025-04-30 04:39:38,087 | INFO     | sufficient remaining disk space (93523542016 B)
[2025-04-30 00:40:14] 2025-04-30 04:39:38,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-30 00:40:14] 2025-04-30 04:39:38,088 | INFO     | current server update state: UPDATING_FINAL
[2025-04-30 00:40:14] 2025-04-30 04:39:38,088 | INFO     | update_server=False
[2025-04-30 00:40:14] 2025-04-30 04:39:38,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-30 00:40:14] 2025-04-30 04:39:38,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-30 00:40:14] 2025-04-30 04:39:38,089 | INFO     | aborting loop
[2025-04-30 00:40:14] 2025-04-30 04:39:38,158 | INFO     | all job control threads have been joined
[2025-04-30 00:40:14] 2025-04-30 04:39:38,259 | INFO     | all payload control threads have been joined
[2025-04-30 00:40:14] 2025-04-30 04:39:39,094 | INFO     | [job] retrieve thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:39,095 | INFO     | [job] job monitor thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:39,176 | INFO     | all data control threads have been joined
[2025-04-30 00:40:14] 2025-04-30 04:39:39,176 | INFO     | [job] control thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:39,179 | INFO     | [payload] validate_pre thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:39,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-30 00:40:14] 2025-04-30 04:39:39,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-30 00:40:14] 2025-04-30 04:39:39,284 | INFO     | [payload] control thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:39,343 | INFO     | [payload] validate_post thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:39,343 | INFO     | [payload] failed_post thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:40,024 | INFO     | [job] create_data_payload thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:40,132 | INFO     | [data] copytool_in thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:40,133 | INFO     | [job] validate thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:40,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:40,214 | INFO     | [data] control thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:40,247 | INFO     | [payload] execute_payloads thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:40,299 | INFO     | [job] queue monitor thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:40,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-30 00:40:14] 2025-04-30 04:39:41,209 | INFO     | PID=429442 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-30 00:40:14] 2025-04-30 04:39:41,209 | INFO     | .. there are 23 such processes running
[2025-04-30 00:40:14] 2025-04-30 04:39:41,209 | INFO     | found 0 job(s) in 20 queues
[2025-04-30 00:40:14] 2025-04-30 04:39:41,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-30 00:40:14] 2025-04-30 04:39:41,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-30 00:40:14] 2025-04-30 04:39:41,218 | INFO     | [data] copytool_out thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:44,991 | INFO     | [data] queue_monitor thread has finished
[2025-04-30 00:40:14] 2025-04-30 04:39:46,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815760914240)>', '<ExcThread(monitor, started 139815261558528)>']
[2025-04-30 00:40:14] 2025-04-30 04:39:46,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-30 00:40:14] 2025-04-30 04:39:46,282 | INFO     | [monitor] control thread has ended
[2025-04-30 00:40:14] 2025-04-30 04:39:51,277 | INFO     | all workflow threads have been joined
[2025-04-30 00:40:14] 2025-04-30 04:39:51,277 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-30 00:40:14] 2025-04-30 04:39:51,277 | INFO     | traces error code: 0
[2025-04-30 00:40:14] 2025-04-30 04:39:51,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-30 00:40:14] 2025-04-30 04:39:53,092 [wrapper] ==== pilot stdout END ====
[2025-04-30 00:40:14] 2025-04-30 04:39:53,122 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-30 00:40:14] 2025-04-30 04:39:53,185 [wrapper] pilotpid: 429442
[2025-04-30 00:40:14] 2025-04-30 04:39:53,230 [wrapper] Pilot exit status: 0
[2025-04-30 00:40:14] 2025-04-30 04:39:53,439 [wrapper] pandaids: 6621016827
[2025-04-30 00:40:14] 2025-04-30 04:39:53,753 [wrapper] cleanup supervisor_pilot 2277721 429443
[2025-04-30 00:40:14] 2025-04-30 04:39:53,782 [wrapper] Test setup, not cleaning
[2025-04-30 00:40:14] 2025-04-30 04:39:53,803 [wrapper] apfmon messages muted
[2025-04-30 00:40:14] 2025-04-30 04:39:53,827 [wrapper] ==== wrapper stdout END ====
[2025-04-30 00:40:14] 2025-04-30 04:39:53,980 [wrapper] ==== wrapper stderr END ====
[2025-04-30 00:40:14]  *** Error codes and diagnostics ***
[2025-04-30 00:40:14]     "exeErrorCode": 0,
[2025-04-30 00:40:14]     "exeErrorDiag": "",
[2025-04-30 00:40:14]     "pilotErrorCode": 0,
[2025-04-30 00:40:14]     "pilotErrorDiag": "",
[2025-04-30 00:40:14]  *** Listing of results directory ***
[2025-04-30 00:40:14] total 414804
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas    495897 Apr 29 07:03 pilot3.tar.gz
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas      5111 Apr 29 07:19 queuedata.json
[2025-04-30 00:40:14] -rwx------. 1 boincer umatlas     37140 Apr 29 07:20 runpilot2-wrapper.sh
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas       100 Apr 29 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-30 00:40:14] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 29 18:52 run_atlas
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas       105 Apr 29 18:52 job.xml
[2025-04-30 00:40:14] -rw-r--r--. 2 boincer umatlas 224131050 Apr 29 18:52 EVNT.44292255._004299.pool.root.1
[2025-04-30 00:40:14] -rw-r--r--. 2 boincer umatlas     17569 Apr 29 18:52 start_atlas.sh
[2025-04-30 00:40:14] drwxrwx--x. 2 boincer umatlas      4096 Apr 29 18:52 shared
[2025-04-30 00:40:14] -rw-r--r--. 2 boincer umatlas    508884 Apr 29 18:52 input.tar.gz
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas         0 Apr 29 18:52 boinc_lockfile
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas      2551 Apr 29 18:52 pandaJob.out
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas       467 Apr 29 18:52 setup.sh.local
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas    989886 Apr 29 18:53 agis_schedconf.cvmfs.json
[2025-04-30 00:40:14] drwx------. 4 boincer umatlas      4096 Apr 29 18:53 pilot3
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas 192691265 Apr 30 00:36 HITS.44292257._038481.pool.root.1
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas       531 Apr 30 00:36 boinc_task_state.xml
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas      6857 Apr 30 00:38 init_data.xml
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas      1058 Apr 30 00:38 memory_monitor_summary.json
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas   1596659 Apr 30 00:38 agis_ddmendpoints.agis.ALL.json
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas    446043 Apr 30 00:38 log.44292257._038481.job.log.tgz.1
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas        95 Apr 30 00:39 pilot_heartbeat.json
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas      7750 Apr 30 00:39 heartbeat.json
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas      4747 Apr 30 00:39 pilotlog.txt
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas   1604762 Apr 30 00:39 log.44292257._038481.job.log.1
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas       357 Apr 30 00:39 output.list
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas       620 Apr 30 00:39 runtime_log
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas   2068480 Apr 30 00:39 result.tar.gz
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas     11424 Apr 30 00:39 runtime_log.err
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas       661 Apr 30 00:39 j1KODmVByT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVywLDmXguwUn.diag
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas        28 Apr 30 00:40 wrapper_checkpoint.txt
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas      8192 Apr 30 00:40 boinc_mmap_file
[2025-04-30 00:40:14] -rw-r--r--. 1 boincer umatlas     21258 Apr 30 00:40 stderr.txt
[2025-04-30 00:40:14] HITS file was successfully produced:
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas 192691265 Apr 30 00:36 shared/HITS.pool.root.1
[2025-04-30 00:40:14]  *** Contents of shared directory: ***
[2025-04-30 00:40:14] total 409604
[2025-04-30 00:40:14] -rw-r--r--. 2 boincer umatlas 224131050 Apr 29 18:52 ATLAS.root_0
[2025-04-30 00:40:14] -rw-r--r--. 2 boincer umatlas     17569 Apr 29 18:52 start_atlas.sh
[2025-04-30 00:40:14] -rw-r--r--. 2 boincer umatlas    508884 Apr 29 18:52 input.tar.gz
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas 192691265 Apr 30 00:36 HITS.pool.root.1
[2025-04-30 00:40:14] -rw-------. 1 boincer umatlas   2068480 Apr 30 00:39 result.tar.gz
00:40:15 (420347): run_atlas exited; CPU time 46862.030484
00:40:15 (420347): called boinc_finish(0)

</stderr_txt>
]]>

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