Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:45:15 (1908108): wrapper (7.7.26015): starting
01:45:15 (1908108): wrapper: running run_atlas (--nthreads 4)
[2025-04-30 01:45:15] Arguments: --nthreads 4
[2025-04-30 01:45:15] Threads: 4
[2025-04-30 01:45:15] Checking for CVMFS
[2025-04-30 01:45:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-30 01:45:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-30 01:45:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-30 01:45:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-30 01:45:16] 2.12.7.0 447398 3337 87060 145433 3 186 8071687 10240001 678 130560 0 3783979 99.937 1638934 448 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-04-30 01:45:16] CVMFS is ok
[2025-04-30 01:45:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-30 01:45:16] Checking for apptainer binary...
[2025-04-30 01:45:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-30 01:45:16] Running /usr/bin/apptainer --version
[2025-04-30 01:45:16] apptainer version 1.3.4
[2025-04-30 01:45:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-30 01:45:16] atlas7l1
[2025-04-30 01:45:16] apptainer works
[2025-04-30 01:45:16] Set ATHENA_PROC_NUMBER=4
[2025-04-30 01:45:16] Set ATHENA_CORE_NUMBER=4
[2025-04-30 01:45:16] Starting ATLAS job with PandaID=6620769799
[2025-04-30 01:45:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-30 03:19:43]  *** The last 200 lines of the pilot log: ***
[2025-04-30 03:19:43]  storage_token=
[2025-04-30 03:19:43]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6620769799/log.44292257._036378.job.log.tgz.1
[2025-04-30 03:19:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/77/log.44292257._036378.job.log.tgz.1
[2025-04-30 03:19:43]  workdir=None
[2025-04-30 03:19:43] ]
[2025-04-30 03:19:43] 2025-04-30 01:19:18,314 | INFO     | transferring file log.44292257._036378.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6620769799/log.44292257._036378.job.log.tgz.1 to /var/li
[2025-04-30 03:19:43] 2025-04-30 01:19:18,314 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6620769799/log.44292257._036378.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-04-30 03:19:43] 2025-04-30 01:19:18,334 | INFO     | adding to output.list: log.44292257._036378.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/77/log.44292257._036378.job.log.tg
[2025-04-30 03:19:43] 2025-04-30 01:19:18,336 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-30 03:19:43] 2025-04-30 01:19:18,336 | INFO     | summary of transferred files:
[2025-04-30 03:19:43] 2025-04-30 01:19:18,336 | INFO     |  -- lfn=log.44292257._036378.job.log.tgz.1, status_code=0, status=transferred
[2025-04-30 03:19:43] 2025-04-30 01:19:18,336 | INFO     | stage-out finished correctly
[2025-04-30 03:19:43] 2025-04-30 01:19:18,386 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-30 03:19:43] 2025-04-30 01:19:20,200 | WARNING  | process 1918369 can no longer be monitored (due to stat problems) - aborting
[2025-04-30 03:19:43] 2025-04-30 01:19:20,200 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6620769799/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 03:19:43] 2025-04-30 01:19:20,201 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6620769799/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 03:19:43] 2025-04-30 01:19:20,201 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2316081 B
[2025-04-30 03:19:43] 2025-04-30 01:19:20,201 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15333 B
[2025-04-30 03:19:43] 2025-04-30 01:19:20,201 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-04-30 03:19:43] 2025-04-30 01:19:20,213 | INFO     | sufficient remaining disk space (60321431552 B)
[2025-04-30 03:19:43] 2025-04-30 01:19:20,213 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-30 03:19:43] 2025-04-30 01:19:20,214 | INFO     | size of work directory /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6620769799: 2618647 B (within 2537553920 B limit)
[2025-04-30 03:19:43] 2025-04-30 01:19:20,214 | INFO     | pfn file=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6620769799/HITS.44292257._036378.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-30 03:19:43] 2025-04-30 01:19:20,214 | INFO     | total size of present files: 0 B (workdir size: 2618647 B)
[2025-04-30 03:19:43] 2025-04-30 01:19:20,214 | INFO     | output file size check: skipping output file /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6620769799/HITS.44292257._036378.pool.root.1 since it does not exist
[2025-04-30 03:19:43] 2025-04-30 01:19:20,293 | INFO     | job 6620769799 has state=finished
[2025-04-30 03:19:43] 2025-04-30 01:19:20,293 | INFO     | preparing for final server update for job 6620769799 in state='finished'
[2025-04-30 03:19:43] 2025-04-30 01:19:20,293 | INFO     | this job has now completed (state=finished)
[2025-04-30 03:19:43] 2025-04-30 01:19:20,294 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-30 03:19:43] 2025-04-30 01:19:20,294 | INFO     | log transfer has been attempted: DONE
[2025-04-30 03:19:43] 2025-04-30 01:19:20,294 | INFO     | job 6620769799 has finished - writing final server update
[2025-04-30 03:19:43] 2025-04-30 01:19:20,294 | INFO     | total number of processed events: 400 (read)
[2025-04-30 03:19:43] 2025-04-30 01:19:20,295 | INFO     | executing command: lscpu
[2025-04-30 03:19:43] 2025-04-30 01:19:20,303 | INFO     | number of running child processes to parent process 1918369: 1
[2025-04-30 03:19:43] 2025-04-30 01:19:20,303 | INFO     | maximum number of monitored processes: 6
[2025-04-30 03:19:43] 2025-04-30 01:19:20,311 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-30 03:19:43] 2025-04-30 01:19:22,806 | INFO     | monitor loop #432: job 0:6620769799 is in state 'finished'
[2025-04-30 03:19:43] 2025-04-30 01:19:22,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-30 03:19:43] 2025-04-30 01:19:23,606 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-30 03:19:43] 2025-04-30 01:19:23,606 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6620769799/memory_monitor_summary.json (trf name=prmon)
[2025-04-30 03:19:43] 2025-04-30 01:19:23,606 | INFO     | extracted standard info from prmon json
[2025-04-30 03:19:43] 2025-04-30 01:19:23,606 | INFO     | extracted standard memory fields from prmon json
[2025-04-30 03:19:43] 2025-04-30 01:19:23,606 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-30 03:19:43] 2025-04-30 01:19:23,607 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-30 03:19:43] 2025-04-30 01:19:23,607 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-30 03:19:43] 2025-04-30 01:19:23,608 | INFO     | fitting pss+swap vs Time
[2025-04-30 03:19:43] 2025-04-30 01:19:23,608 | INFO     | sum of square deviations: 190403570.0
[2025-04-30 03:19:43] 2025-04-30 01:19:23,608 | INFO     | sum of deviations: -7073153252.000001
[2025-04-30 03:19:43] 2025-04-30 01:19:23,608 | INFO     | mean x: 1745973214.0
[2025-04-30 03:19:43] 2025-04-30 01:19:23,608 | INFO     | mean y: 2380421.4
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | -- intersect: 64862173315.56157
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | intersect: 64862173315.56157
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | chi2: 0.053803053877392225
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | -- intersect: 64862173315.56157
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | current memory leak: -37.15 B/s (using 85 data points, chi2=0.05)
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | ..............................
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | . Timing measurements:
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | . get job = 0 s
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | . initial setup = 1 s
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | . payload setup = 4 s
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | . stage-in = 0 s
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | . payload execution = 5610 s
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | . stage-out = 0 s
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | . log creation = 0 s
[2025-04-30 03:19:43] 2025-04-30 01:19:23,609 | INFO     | ..............................
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | 
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | job summary report
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | --------------------------------------------------
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | PanDA job id: 6620769799
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | task id: 44292257
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | errors: (none)
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | pilot state: finished 
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | transexitcode: 0
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | exeerrorcode: 0
[2025-04-30 03:19:43] 2025-04-30 01:19:23,659 | INFO     | exeerrordiag: 
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | exitcode: 0
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | exitmsg: OK
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | cpuconsumptiontime: 21156 s
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | nevents: 400
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | neventsw: 0
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | pid: 1918369
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | pgrp: 1918369
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | corecount: 4
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | event service: False
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | sizes: {0: 2393747, 2: 2393953, 11: 2393981, 5618: 2420579, 5619: 2420578, 5620: 2429787, 5625: 2429929}
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | --------------------------------------------------
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | 
[2025-04-30 03:19:43] 2025-04-30 01:19:23,660 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-30 03:19:43] 2025-04-30 01:19:23,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,673 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-30 03:19:43] 2025-04-30 01:19:23,673 | INFO     | job 6620769799 has completed (purged errors)
[2025-04-30 03:19:43] 2025-04-30 01:19:23,673 | INFO     | overall cleanup function is called
[2025-04-30 03:19:43] 2025-04-30 01:19:24,679 | INFO     | --- collectZombieJob: --- 10, [1918369]
[2025-04-30 03:19:43] 2025-04-30 01:19:24,679 | INFO     | zombie collector waiting for pid 1918369
[2025-04-30 03:19:43] 2025-04-30 01:19:24,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-30 03:19:43] 2025-04-30 01:19:24,680 | INFO     | collected zombie processes
[2025-04-30 03:19:43] 2025-04-30 01:19:24,680 | INFO     | will attempt to kill all subprocesses of pid=1918369
[2025-04-30 03:19:43] 2025-04-30 01:19:24,762 | INFO     | process IDs to be killed: [1918369] (in reverse order)
[2025-04-30 03:19:43] 2025-04-30 01:19:24,791 | WARNING  | found no corresponding commands to process id(s)
[2025-04-30 03:19:43] 2025-04-30 01:19:24,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-30 03:19:43] 2025-04-30 01:19:24,794 | INFO     | did not find any defunct processes belonging to 1918369
[2025-04-30 03:19:43] 2025-04-30 01:19:24,796 | INFO     | did not find any defunct processes belonging to 1918369
[2025-04-30 03:19:43] 2025-04-30 01:19:24,796 | INFO     | ready for new job
[2025-04-30 03:19:43] 2025-04-30 01:19:24,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-30 03:19:43] 2025-04-30 01:19:24,797 | INFO     | **************************************
[2025-04-30 03:19:43] 2025-04-30 01:19:24,797 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-30 03:19:43] 2025-04-30 01:19:24,797 | INFO     | **************************************
[2025-04-30 03:19:43] 2025-04-30 01:19:24,797 | INFO     | 
[2025-04-30 03:19:43] 2025-04-30 01:19:24,797 | INFO     | pilot is running in a VM
[2025-04-30 03:19:43] 2025-04-30 01:19:24,797 | INFO     | architecture information:
[2025-04-30 03:19:43] 2025-04-30 01:19:24,797 | INFO     | executing command: cat /etc/os-release
[2025-04-30 03:19:43] 2025-04-30 01:19:24,810 | INFO     | cat /etc/os-release:
[2025-04-30 03:19:43] NAME="CentOS Linux"
[2025-04-30 03:19:43] VERSION="7 (Core)"
[2025-04-30 03:19:43] ID="centos"
[2025-04-30 03:19:43] ID_LIKE="rhel fedora"
[2025-04-30 03:19:43] VERSION_ID="7"
[2025-04-30 03:19:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-30 03:19:43] ANSI_COLOR="0;31"
[2025-04-30 03:19:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-30 03:19:43] HOME_URL="https://www.centos.org/"
[2025-04-30 03:19:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-30 03:19:43] 
[2025-04-30 03:19:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-30 03:19:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-30 03:19:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-30 03:19:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-30 03:19:43] 
[2025-04-30 03:19:43] 2025-04-30 01:19:24,810 | INFO     | **************************************
[2025-04-30 03:19:43] 2025-04-30 01:19:25,313 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-04-30 03:19:43] 2025-04-30 01:19:25,323 | INFO     | sufficient remaining disk space (60324577280 B)
[2025-04-30 03:19:43] 2025-04-30 01:19:25,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-30 03:19:43] 2025-04-30 01:19:25,323 | INFO     | current server update state: UPDATING_FINAL
[2025-04-30 03:19:43] 2025-04-30 01:19:25,323 | INFO     | update_server=False
[2025-04-30 03:19:43] 2025-04-30 01:19:25,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-30 03:19:43] 2025-04-30 01:19:25,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-30 03:19:43] 2025-04-30 01:19:25,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-30 03:19:43] 2025-04-30 01:19:25,324 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-30 03:19:43] 2025-04-30 01:19:25,325 | INFO     | found 0 job(s) in 20 queues
[2025-04-30 03:19:43] 2025-04-30 01:19:25,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-30 03:19:43] 2025-04-30 01:19:25,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-30 03:19:43] 2025-04-30 01:19:25,711 | INFO     | all payload control threads have been joined
[2025-04-30 03:19:43] 2025-04-30 01:19:26,251 | INFO     | all data control threads have been joined
[2025-04-30 03:19:43] 2025-04-30 01:19:26,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-30 03:19:43] 2025-04-30 01:19:26,315 | INFO     | aborting loop
[2025-04-30 03:19:43] 2025-04-30 01:19:26,324 | INFO     | [job] queue monitor thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:26,329 | INFO     | [job] retrieve thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:26,347 | INFO     | [job] validate thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:26,364 | INFO     | all job control threads have been joined
[2025-04-30 03:19:43] 2025-04-30 01:19:26,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-30 03:19:43] 2025-04-30 01:19:26,711 | INFO     | [payload] control thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:26,778 | INFO     | [data] copytool_in thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:26,855 | INFO     | [payload] validate_post thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:27,138 | INFO     | [job] create_data_payload thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:27,246 | INFO     | [payload] execute_payloads thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:27,256 | INFO     | [data] control thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:27,320 | INFO     | [job] job monitor thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:27,369 | INFO     | [job] control thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:27,691 | INFO     | [payload] failed_post thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:27,740 | INFO     | [payload] validate_pre thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:28,408 | INFO     | [data] copytool_out thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:29,330 | INFO     | [data] queue_monitor thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:35,698 | INFO     | job.realtimelogging is not enabled
[2025-04-30 03:19:43] 2025-04-30 01:19:36,703 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-30 03:19:43] 2025-04-30 01:19:38,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137471422584640)>', '<ExcThread(monitor, started 137470884710144)>']
[2025-04-30 03:19:43] 2025-04-30 01:19:38,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-30 03:19:43] 2025-04-30 01:19:38,392 | INFO     | [monitor] control thread has ended
[2025-04-30 03:19:43] 2025-04-30 01:19:43,196 | INFO     | all workflow threads have been joined
[2025-04-30 03:19:43] 2025-04-30 01:19:43,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-30 03:19:43] 2025-04-30 01:19:43,198 | INFO     | traces error code: 0
[2025-04-30 03:19:43] 2025-04-30 01:19:43,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-30 03:19:43] 2025-04-30 01:19:43,266 [wrapper] ==== pilot stdout END ====
[2025-04-30 03:19:43] 2025-04-30 01:19:43,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-30 03:19:43] 2025-04-30 01:19:43,275 [wrapper] pilotpid: 1911827
[2025-04-30 03:19:43] 2025-04-30 01:19:43,279 [wrapper] Pilot exit status: 0
[2025-04-30 03:19:43] 2025-04-30 01:19:43,295 [wrapper] pandaids: 6620769799
[2025-04-30 03:19:43] 2025-04-30 01:19:43,322 [wrapper] cleanup supervisor_pilot 1937459 1911828
[2025-04-30 03:19:43] 2025-04-30 01:19:43,327 [wrapper] Test setup, not cleaning
[2025-04-30 03:19:43] 2025-04-30 01:19:43,329 [wrapper] apfmon messages muted
[2025-04-30 03:19:43] 2025-04-30 01:19:43,331 [wrapper] ==== wrapper stdout END ====
[2025-04-30 03:19:43] 2025-04-30 01:19:43,336 [wrapper] ==== wrapper stderr END ====
[2025-04-30 03:19:43]  *** Error codes and diagnostics ***
[2025-04-30 03:19:43]     "exeErrorCode": 0,
[2025-04-30 03:19:43]     "exeErrorDiag": "",
[2025-04-30 03:19:43]     "pilotErrorCode": 0,
[2025-04-30 03:19:43]     "pilotErrorDiag": "",
[2025-04-30 03:19:43]  *** Listing of results directory ***
[2025-04-30 03:19:43] insgesamt 419456
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc    495897 Apr 29 08:18 pilot3.tar.gz
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc      5111 Apr 29 08:41 queuedata.json
[2025-04-30 03:19:43] -rwx------ 1 yeti boinc     37140 Apr 29 08:43 runpilot2-wrapper.sh
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc       100 Apr 30 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-30 03:19:43] -rwxr-xr-x 1 yeti boinc      7986 Apr 30 01:45 run_atlas
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc       105 Apr 30 01:45 job.xml
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc      6653 Apr 30 01:45 init_data.xml
[2025-04-30 03:19:43] -rw-r--r-- 2 yeti boinc 225512311 Apr 30 01:45 EVNT.44292255._004062.pool.root.1
[2025-04-30 03:19:43] -rw-r--r-- 2 yeti boinc     17569 Apr 30 01:45 start_atlas.sh
[2025-04-30 03:19:43] drwxrwx--x 2 yeti boinc      4096 Apr 30 01:45 shared
[2025-04-30 03:19:43] -rw-r--r-- 2 yeti boinc    508886 Apr 30 01:45 input.tar.gz
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc         0 Apr 30 01:45 boinc_lockfile
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc      2552 Apr 30 01:45 pandaJob.out
[2025-04-30 03:19:43] -rw------- 1 yeti boinc       462 Apr 30 01:45 setup.sh.local
[2025-04-30 03:19:43] -rw------- 1 yeti boinc    990472 Apr 30 01:45 agis_schedconf.cvmfs.json
[2025-04-30 03:19:43] -rw------- 1 yeti boinc   1596659 Apr 30 01:45 agis_ddmendpoints.agis.ALL.json
[2025-04-30 03:19:43] drwx------ 4 yeti boinc      4096 Apr 30 01:45 pilot3
[2025-04-30 03:19:43] -rw------- 1 yeti boinc 198534572 Apr 30 03:18 HITS.44292257._036378.pool.root.1
[2025-04-30 03:19:43] -rw------- 1 yeti boinc        95 Apr 30 03:19 pilot_heartbeat.json
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc       529 Apr 30 03:19 boinc_task_state.xml
[2025-04-30 03:19:43] -rw------- 1 yeti boinc      1037 Apr 30 03:19 memory_monitor_summary.json
[2025-04-30 03:19:43] -rw------- 1 yeti boinc    248887 Apr 30 03:19 log.44292257._036378.job.log.tgz.1
[2025-04-30 03:19:43] -rw------- 1 yeti boinc      7688 Apr 30 03:19 heartbeat.json
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc      8192 Apr 30 03:19 boinc_mmap_file
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc        27 Apr 30 03:19 wrapper_checkpoint.txt
[2025-04-30 03:19:43] -rw------- 1 yeti boinc      4624 Apr 30 03:19 pilotlog.txt
[2025-04-30 03:19:43] -rw------- 1 yeti boinc    567897 Apr 30 03:19 log.44292257._036378.job.log.1
[2025-04-30 03:19:43] -rw------- 1 yeti boinc       357 Apr 30 03:19 output.list
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc       620 Apr 30 03:19 runtime_log
[2025-04-30 03:19:43] -rw------- 1 yeti boinc    839680 Apr 30 03:19 result.tar.gz
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc     11616 Apr 30 03:19 runtime_log.err
[2025-04-30 03:19:43] -rw------- 1 yeti boinc       638 Apr 30 03:19 PCgNDmQrtT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmxUDLDmq5Rfgm.diag
[2025-04-30 03:19:43] -rw-r--r-- 1 yeti boinc     22179 Apr 30 03:19 stderr.txt
[2025-04-30 03:19:43] HITS file was successfully produced:
[2025-04-30 03:19:43] -rw------- 1 yeti boinc 198534572 Apr 30 03:18 shared/HITS.pool.root.1
[2025-04-30 03:19:43]  *** Contents of shared directory: ***
[2025-04-30 03:19:43] insgesamt 415460
[2025-04-30 03:19:43] -rw-r--r-- 2 yeti boinc 225512311 Apr 30 01:45 ATLAS.root_0
[2025-04-30 03:19:43] -rw-r--r-- 2 yeti boinc     17569 Apr 30 01:45 start_atlas.sh
[2025-04-30 03:19:43] -rw-r--r-- 2 yeti boinc    508886 Apr 30 01:45 input.tar.gz
[2025-04-30 03:19:43] -rw------- 1 yeti boinc 198534572 Apr 30 03:18 HITS.pool.root.1
[2025-04-30 03:19:43] -rw------- 1 yeti boinc    839680 Apr 30 03:19 result.tar.gz
03:19:45 (1908108): run_atlas exited; CPU time 21222.894888
03:19:45 (1908108): called boinc_finish(0)

</stderr_txt>
]]>

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