Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:25:29 (6646): wrapper (7.7.26015): starting
16:25:29 (6646): wrapper: running run_atlas (--nthreads 12)
[2025-04-29 16:25:29] Arguments: --nthreads 12
[2025-04-29 16:25:29] Threads: 12
[2025-04-29 16:25:29] Checking for CVMFS
[2025-04-29 16:25:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 16:25:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 16:25:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 16:25:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 16:25:29] 2.10.0.0 19326 275 67032 145430 1 61 15573813 16777217 929 130560 0 915855 99.997 149015 9523 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-04-29 16:25:29] CVMFS is ok
[2025-04-29 16:25:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 16:25:29] Checking for apptainer binary...
[2025-04-29 16:25:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-29 16:25:29] Running /usr/bin/apptainer --version
[2025-04-29 16:25:29] apptainer version 1.3.6-150600.4.9.1
[2025-04-29 16:25:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 16:25:29] boinc-runner
[2025-04-29 16:25:29] apptainer works
[2025-04-29 16:25:29] Set ATHENA_PROC_NUMBER=12
[2025-04-29 16:25:29] Set ATHENA_CORE_NUMBER=12
[2025-04-29 16:25:29] Starting ATLAS job with PandaID=6620565673
[2025-04-29 16:25:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 17:22:43]  *** The last 200 lines of the pilot log: ***
[2025-04-29 17:22:43]  filetype=log
[2025-04-29 17:22:43]  guid=e1d3857a-160d-4f14-8244-b8e31f0490c6
[2025-04-29 17:22:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-29 17:22:43]  is_altstaged=None
[2025-04-29 17:22:43]  is_tar=False
[2025-04-29 17:22:43]  lfn=log.44270688._004199.job.log.tgz.1
[2025-04-29 17:22:43]  mtime=0
[2025-04-29 17:22:43]  protocol_id=None
[2025-04-29 17:22:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-29 17:22:43]  replicas=None
[2025-04-29 17:22:43]  scope=mc23_13p6TeV
[2025-04-29 17:22:43]  status=None
[2025-04-29 17:22:43]  status_code=0
[2025-04-29 17:22:43]  storage_token=
[2025-04-29 17:22:43]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6620565673/log.44270688._004199.job.log.tgz.1
[2025-04-29 17:22:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/9e/log.44270688._004199.job.log.tgz.1
[2025-04-29 17:22:43]  workdir=None
[2025-04-29 17:22:43] ]
[2025-04-29 17:22:43] 2025-04-29 22:22:18,709 | INFO     | transferring file log.44270688._004199.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6620565673/log.44270688._004199.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-29 17:22:43] 2025-04-29 22:22:18,710 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6620565673/log.44270688._004199.job.log.tgz.1 /var/lib/boinc/slots/2/log.44270688._004199.job
[2025-04-29 17:22:43] 2025-04-29 22:22:18,719 | INFO     | adding to output.list: log.44270688._004199.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/9e/log.44270688._004199.job.log.tg
[2025-04-29 17:22:43] 2025-04-29 22:22:18,719 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-29 17:22:43] 2025-04-29 22:22:18,719 | INFO     | summary of transferred files:
[2025-04-29 17:22:43] 2025-04-29 22:22:18,719 | INFO     |  -- lfn=log.44270688._004199.job.log.tgz.1, status_code=0, status=transferred
[2025-04-29 17:22:43] 2025-04-29 22:22:18,719 | INFO     | stage-out finished correctly
[2025-04-29 17:22:43] 2025-04-29 22:22:20,988 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-29 17:22:43] 2025-04-29 22:22:21,069 | INFO     | monitor loop #263: job 0:6620565673 is in state 'finished'
[2025-04-29 17:22:43] 2025-04-29 22:22:21,069 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:22:43] 2025-04-29 22:22:21,229 | INFO     | job 6620565673 has state=finished
[2025-04-29 17:22:43] 2025-04-29 22:22:21,229 | INFO     | preparing for final server update for job 6620565673 in state='finished'
[2025-04-29 17:22:43] 2025-04-29 22:22:21,230 | INFO     | this job has now completed (state=finished)
[2025-04-29 17:22:43] 2025-04-29 22:22:21,230 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-29 17:22:43] 2025-04-29 22:22:21,230 | INFO     | log transfer has been attempted: DONE
[2025-04-29 17:22:43] 2025-04-29 22:22:21,230 | INFO     | job 6620565673 has finished - writing final server update
[2025-04-29 17:22:43] 2025-04-29 22:22:21,230 | INFO     | total number of processed events: 400 (read)
[2025-04-29 17:22:43] 2025-04-29 22:22:21,231 | INFO     | executing command: lscpu
[2025-04-29 17:22:43] 2025-04-29 22:22:21,244 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-29 17:22:43] 2025-04-29 22:22:23,572 | INFO     | monitor loop #264: job 0:6620565673 is in state 'finished'
[2025-04-29 17:22:43] 2025-04-29 22:22:23,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:22:43] 2025-04-29 22:22:23,616 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-29 17:22:43] 2025-04-29 22:22:23,616 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6620565673/memory_monitor_summary.json (trf name=prmon)
[2025-04-29 17:22:43] 2025-04-29 22:22:23,616 | INFO     | extracted standard info from prmon json
[2025-04-29 17:22:43] 2025-04-29 22:22:23,616 | INFO     | extracted standard memory fields from prmon json
[2025-04-29 17:22:43] 2025-04-29 22:22:23,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | INFO     | fitting pss+swap vs Time
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | INFO     | sum of square deviations: 36465800.0
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | INFO     | sum of deviations: 2461639627.9999986
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | INFO     | mean x: 1745963723.0
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | INFO     | mean y: 2844307.8163265307
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | INFO     | -- intersect: -117859193261.28163
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | INFO     | intersect: -117859193261.28163
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | INFO     | chi2: 0.7126730561059167
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | INFO     | -- intersect: -117859193261.28163
[2025-04-29 17:22:43] 2025-04-29 22:22:23,617 | INFO     | current memory leak: 67.51 B/s (using 49 data points, chi2=0.71)
[2025-04-29 17:22:43] 2025-04-29 22:22:23,618 | INFO     | ..............................
[2025-04-29 17:22:43] 2025-04-29 22:22:23,618 | INFO     | . Timing measurements:
[2025-04-29 17:22:43] 2025-04-29 22:22:23,618 | INFO     | . get job = 0 s
[2025-04-29 17:22:43] 2025-04-29 22:22:23,618 | INFO     | . initial setup = 2 s
[2025-04-29 17:22:43] 2025-04-29 22:22:23,618 | INFO     | . payload setup = 2 s
[2025-04-29 17:22:43] 2025-04-29 22:22:23,618 | INFO     | . stage-in = 0 s
[2025-04-29 17:22:43] 2025-04-29 22:22:23,618 | INFO     | . payload execution = 3383 s
[2025-04-29 17:22:43] 2025-04-29 22:22:23,618 | INFO     | . stage-out = 0 s
[2025-04-29 17:22:43] 2025-04-29 22:22:23,618 | INFO     | . log creation = 0 s
[2025-04-29 17:22:43] 2025-04-29 22:22:23,618 | INFO     | ..............................
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | 
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | job summary report
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | --------------------------------------------------
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | PanDA job id: 6620565673
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | task id: 44270688
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | errors: (none)
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | pilot state: finished 
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | transexitcode: 0
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | exeerrorcode: 0
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | exeerrordiag: 
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | exitcode: 0
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | exitmsg: OK
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | cpuconsumptiontime: 33545 s
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | nevents: 400
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | neventsw: 0
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | pid: 17516
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | pgrp: 17516
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | corecount: 12
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | event service: False
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | sizes: {0: 2393615, 3: 2393821, 11: 2393849, 3389: 2419472, 3390: 2428413, 3392: 2428469, 3395: 2428767}
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | --------------------------------------------------
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | 
[2025-04-29 17:22:43] 2025-04-29 22:22:23,644 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | job 6620565673 has completed (purged errors)
[2025-04-29 17:22:43] 2025-04-29 22:22:23,652 | INFO     | overall cleanup function is called
[2025-04-29 17:22:43] 2025-04-29 22:22:24,657 | INFO     | --- collectZombieJob: --- 10, [17516]
[2025-04-29 17:22:43] 2025-04-29 22:22:24,657 | INFO     | zombie collector waiting for pid 17516
[2025-04-29 17:22:43] 2025-04-29 22:22:24,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 17:22:43] 2025-04-29 22:22:24,657 | INFO     | collected zombie processes
[2025-04-29 17:22:43] 2025-04-29 22:22:24,658 | INFO     | will attempt to kill all subprocesses of pid=17516
[2025-04-29 17:22:43] 2025-04-29 22:22:24,695 | INFO     | process IDs to be killed: [17516] (in reverse order)
[2025-04-29 17:22:43] 2025-04-29 22:22:24,718 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 17:22:43] 2025-04-29 22:22:24,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 17:22:43] 2025-04-29 22:22:24,720 | INFO     | did not find any defunct processes belonging to 17516
[2025-04-29 17:22:43] 2025-04-29 22:22:24,721 | INFO     | did not find any defunct processes belonging to 17516
[2025-04-29 17:22:43] 2025-04-29 22:22:24,721 | INFO     | ready for new job
[2025-04-29 17:22:43] 2025-04-29 22:22:24,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 17:22:43] 2025-04-29 22:22:24,722 | INFO     | **************************************
[2025-04-29 17:22:43] 2025-04-29 22:22:24,722 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 17:22:43] 2025-04-29 22:22:24,722 | INFO     | **************************************
[2025-04-29 17:22:43] 2025-04-29 22:22:24,722 | INFO     | 
[2025-04-29 17:22:43] 2025-04-29 22:22:24,723 | INFO     | architecture information:
[2025-04-29 17:22:43] 2025-04-29 22:22:24,723 | INFO     | executing command: cat /etc/os-release
[2025-04-29 17:22:43] 2025-04-29 22:22:24,731 | INFO     | cat /etc/os-release:
[2025-04-29 17:22:43] NAME="CentOS Linux"
[2025-04-29 17:22:43] VERSION="7 (Core)"
[2025-04-29 17:22:43] ID="centos"
[2025-04-29 17:22:43] ID_LIKE="rhel fedora"
[2025-04-29 17:22:43] VERSION_ID="7"
[2025-04-29 17:22:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 17:22:43] ANSI_COLOR="0;31"
[2025-04-29 17:22:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 17:22:43] HOME_URL="https://www.centos.org/"
[2025-04-29 17:22:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 17:22:43] 
[2025-04-29 17:22:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 17:22:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 17:22:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 17:22:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 17:22:43] 
[2025-04-29 17:22:43] 2025-04-29 22:22:24,732 | INFO     | **************************************
[2025-04-29 17:22:43] 2025-04-29 22:22:25,234 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-04-29 17:22:43] 2025-04-29 22:22:25,246 | INFO     | sufficient remaining disk space (3881350201344 B)
[2025-04-29 17:22:43] 2025-04-29 22:22:25,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 17:22:43] 2025-04-29 22:22:25,246 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 17:22:43] 2025-04-29 22:22:25,246 | INFO     | update_server=False
[2025-04-29 17:22:43] 2025-04-29 22:22:25,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 17:22:43] 2025-04-29 22:22:25,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 17:22:43] 2025-04-29 22:22:25,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 17:22:43] 2025-04-29 22:22:25,247 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-29 17:22:43] 2025-04-29 22:22:25,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 17:22:43] 2025-04-29 22:22:25,247 | INFO     | aborting loop
[2025-04-29 17:22:43] 2025-04-29 22:22:25,247 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 17:22:43] 2025-04-29 22:22:25,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 17:22:43] 2025-04-29 22:22:25,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 17:22:43] 2025-04-29 22:22:25,435 | INFO     | all payload control threads have been joined
[2025-04-29 17:22:43] 2025-04-29 22:22:26,046 | INFO     | all data control threads have been joined
[2025-04-29 17:22:43] 2025-04-29 22:22:26,197 | INFO     | all job control threads have been joined
[2025-04-29 17:22:43] 2025-04-29 22:22:26,248 | INFO     | [job] queue monitor thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:26,250 | INFO     | [job] job monitor thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:26,252 | INFO     | [job] retrieve thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:26,437 | INFO     | [payload] control thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:26,637 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:26,721 | INFO     | [data] copytool_in thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:27,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 17:22:43] 2025-04-29 22:22:27,051 | INFO     | [data] control thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:27,161 | INFO     | [payload] validate_post thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:27,201 | INFO     | [job] control thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:27,249 | INFO     | [data] copytool_out thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:27,333 | INFO     | [payload] failed_post thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:27,417 | INFO     | [job] validate thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:27,519 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:27,730 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:31,033 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:35,949 | INFO     | job.realtimelogging is not enabled
[2025-04-29 17:22:43] 2025-04-29 22:22:36,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 17:22:43] 2025-04-29 22:22:38,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140304237606720)>', '<ExcThread(monitor, started 140303746979584)>']
[2025-04-29 17:22:43] 2025-04-29 22:22:38,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 17:22:43] 2025-04-29 22:22:38,297 | INFO     | [monitor] control thread has ended
[2025-04-29 17:22:43] 2025-04-29 22:22:43,144 | INFO     | all workflow threads have been joined
[2025-04-29 17:22:43] 2025-04-29 22:22:43,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 17:22:43] 2025-04-29 22:22:43,144 | INFO     | traces error code: 0
[2025-04-29 17:22:43] 2025-04-29 22:22:43,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 17:22:43] 2025-04-29 22:22:43,192 [wrapper] ==== pilot stdout END ====
[2025-04-29 17:22:43] 2025-04-29 22:22:43,193 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 17:22:43] 2025-04-29 22:22:43,195 [wrapper] pilotpid: 10568
[2025-04-29 17:22:43] 2025-04-29 22:22:43,197 [wrapper] Pilot exit status: 0
[2025-04-29 17:22:43] 2025-04-29 22:22:43,202 [wrapper] pandaids: 6620565673
[2025-04-29 17:22:43] 2025-04-29 22:22:43,218 [wrapper] cleanup supervisor_pilot 11484 10569
[2025-04-29 17:22:43] 2025-04-29 22:22:43,219 [wrapper] Test setup, not cleaning
[2025-04-29 17:22:43] 2025-04-29 22:22:43,220 [wrapper] apfmon messages muted
[2025-04-29 17:22:43] 2025-04-29 22:22:43,221 [wrapper] ==== wrapper stdout END ====
[2025-04-29 17:22:43] 2025-04-29 22:22:43,222 [wrapper] ==== wrapper stderr END ====
[2025-04-29 17:22:43]  *** Error codes and diagnostics ***
[2025-04-29 17:22:43]     "exeErrorCode": 0,
[2025-04-29 17:22:43]     "exeErrorDiag": "",
[2025-04-29 17:22:43]     "pilotErrorCode": 0,
[2025-04-29 17:22:43]     "pilotErrorDiag": "",
[2025-04-29 17:22:43]  *** Listing of results directory ***
[2025-04-29 17:22:43] total 420996
[2025-04-29 17:22:43] -rwx------ 1 boinc boinc     37140 Apr 28 23:28 runpilot2-wrapper.sh
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc      5111 Apr 28 23:28 queuedata.json
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc    495897 Apr 28 23:28 pilot3.tar.gz
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc       100 Apr 29 16:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 17:22:43] -rwxr-xr-x 1 boinc boinc      7986 Apr 29 16:25 run_atlas
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc       105 Apr 29 16:25 job.xml
[2025-04-29 17:22:43] -rw-r--r-- 2 boinc boinc     17569 Apr 29 16:25 start_atlas.sh
[2025-04-29 17:22:43] drwxrwx--x 1 boinc boinc        76 Apr 29 16:25 shared
[2025-04-29 17:22:43] -rw-r--r-- 2 boinc boinc    508847 Apr 29 16:25 input.tar.gz
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc     10044 Apr 29 16:25 init_data.xml
[2025-04-29 17:22:43] -rw-r--r-- 2 boinc boinc 218946982 Apr 29 16:25 EVNT.44270686._000168.pool.root.1
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc         0 Apr 29 16:25 boinc_lockfile
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc      2467 Apr 29 16:25 pandaJob.out
[2025-04-29 17:22:43] -rw------- 1 boinc boinc       473 Apr 29 16:25 setup.sh.local
[2025-04-29 17:22:43] -rw------- 1 boinc boinc    989894 Apr 29 16:25 agis_schedconf.cvmfs.json
[2025-04-29 17:22:43] -rw------- 1 boinc boinc   1596659 Apr 29 16:25 agis_ddmendpoints.agis.ALL.json
[2025-04-29 17:22:43] drwx------ 1 boinc boinc       368 Apr 29 16:25 pilot3
[2025-04-29 17:22:43] -rw------- 1 boinc boinc        95 Apr 29 17:21 pilot_heartbeat.json
[2025-04-29 17:22:43] -rw------- 1 boinc boinc 206891954 Apr 29 17:21 HITS.44270688._004199.pool.root.1
[2025-04-29 17:22:43] -rw------- 1 boinc boinc      1023 Apr 29 17:22 memory_monitor_summary.json
[2025-04-29 17:22:43] -rw------- 1 boinc boinc    363880 Apr 29 17:22 log.44270688._004199.job.log.tgz.1
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc        27 Apr 29 17:22 wrapper_checkpoint.txt
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc      8192 Apr 29 17:22 boinc_mmap_file
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc       529 Apr 29 17:22 boinc_task_state.xml
[2025-04-29 17:22:43] -rw------- 1 boinc boinc      7679 Apr 29 17:22 heartbeat.json
[2025-04-29 17:22:43] -rw------- 1 boinc boinc      4550 Apr 29 17:22 pilotlog.txt
[2025-04-29 17:22:43] -rw------- 1 boinc boinc    356864 Apr 29 17:22 log.44270688._004199.job.log.1
[2025-04-29 17:22:43] -rw------- 1 boinc boinc       357 Apr 29 17:22 output.list
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc       620 Apr 29 17:22 runtime_log
[2025-04-29 17:22:43] -rw------- 1 boinc boinc    737280 Apr 29 17:22 result.tar.gz
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc     11478 Apr 29 17:22 runtime_log.err
[2025-04-29 17:22:43] -rw------- 1 boinc boinc       652 Apr 29 17:22 aiyLDmxkrT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjMwLDmSPz0Qn.diag
[2025-04-29 17:22:43] -rw-r--r-- 1 boinc boinc     20877 Apr 29 17:22 stderr.txt
[2025-04-29 17:22:43] HITS file was successfully produced:
[2025-04-29 17:22:43] -rw------- 1 boinc boinc 206891954 Apr 29 17:21 shared/HITS.pool.root.1
[2025-04-29 17:22:43]  *** Contents of shared directory: ***
[2025-04-29 17:22:43] total 417100
[2025-04-29 17:22:43] -rw-r--r-- 2 boinc boinc     17569 Apr 29 16:25 start_atlas.sh
[2025-04-29 17:22:43] -rw-r--r-- 2 boinc boinc    508847 Apr 29 16:25 input.tar.gz
[2025-04-29 17:22:43] -rw-r--r-- 2 boinc boinc 218946982 Apr 29 16:25 ATLAS.root_0
[2025-04-29 17:22:43] -rw------- 1 boinc boinc 206891954 Apr 29 17:21 HITS.pool.root.1
[2025-04-29 17:22:43] -rw------- 1 boinc boinc    737280 Apr 29 17:22 result.tar.gz
17:22:44 (6646): run_atlas exited; CPU time 33556.522941
17:22:44 (6646): called boinc_finish(0)

</stderr_txt>
]]>

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