Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:53:38 (1722014): wrapper (7.7.26015): starting
19:53:38 (1722014): wrapper: running run_atlas (--nthreads 4)
[2025-04-29 19:53:38] Arguments: --nthreads 4
[2025-04-29 19:53:38] Threads: 4
[2025-04-29 19:53:38] Checking for CVMFS
[2025-04-29 19:53:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 19:53:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 19:53:38] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 19:53:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 19:53:39] 2.12.7.0 447398 2986 84804 145423 2 56 7732641 10240000 910 130560 0 3299041 99.929 1381670 507 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-04-29 19:53:39] CVMFS is ok
[2025-04-29 19:53:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 19:53:39] Checking for apptainer binary...
[2025-04-29 19:53:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-29 19:53:39] Running /usr/bin/apptainer --version
[2025-04-29 19:53:39] apptainer version 1.3.4
[2025-04-29 19:53:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 19:53:39] atlas7l1
[2025-04-29 19:53:39] apptainer works
[2025-04-29 19:53:39] Set ATHENA_PROC_NUMBER=4
[2025-04-29 19:53:39] Set ATHENA_CORE_NUMBER=4
[2025-04-29 19:53:39] Starting ATLAS job with PandaID=6621016239
[2025-04-29 19:53:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 21:33:37]  *** The last 200 lines of the pilot log: ***
[2025-04-29 21:33:37]  is_altstaged=None
[2025-04-29 21:33:37]  is_tar=False
[2025-04-29 21:33:37]  lfn=log.44292257._038222.job.log.tgz.1
[2025-04-29 21:33:37]  mtime=0
[2025-04-29 21:33:37]  protocol_id=None
[2025-04-29 21:33:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-29 21:33:37]  replicas=None
[2025-04-29 21:33:37]  scope=mc23_13p6TeV
[2025-04-29 21:33:37]  status=None
[2025-04-29 21:33:37]  status_code=0
[2025-04-29 21:33:37]  storage_token=
[2025-04-29 21:33:37]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6621016239/log.44292257._038222.job.log.tgz.1
[2025-04-29 21:33:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/99/log.44292257._038222.job.log.tgz.1
[2025-04-29 21:33:37]  workdir=None
[2025-04-29 21:33:37] ]
[2025-04-29 21:33:37] 2025-04-29 19:33:10,962 | INFO     | transferring file log.44292257._038222.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6621016239/log.44292257._038222.job.log.tgz.1 to /var/li
[2025-04-29 21:33:37] 2025-04-29 19:33:10,962 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6621016239/log.44292257._038222.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-04-29 21:33:37] 2025-04-29 19:33:10,982 | INFO     | adding to output.list: log.44292257._038222.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/99/log.44292257._038222.job.log.tg
[2025-04-29 21:33:37] 2025-04-29 19:33:10,984 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-29 21:33:37] 2025-04-29 19:33:10,984 | INFO     | summary of transferred files:
[2025-04-29 21:33:37] 2025-04-29 19:33:10,984 | INFO     |  -- lfn=log.44292257._038222.job.log.tgz.1, status_code=0, status=transferred
[2025-04-29 21:33:37] 2025-04-29 19:33:10,985 | INFO     | stage-out finished correctly
[2025-04-29 21:33:37] 2025-04-29 19:33:11,661 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-29 21:33:37] 2025-04-29 19:33:13,046 | WARNING  | process 1732256 can no longer be monitored (due to stat problems) - aborting
[2025-04-29 21:33:37] 2025-04-29 19:33:13,046 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6621016239/memory_monitor_summary.json (trf name=prmon)
[2025-04-29 21:33:37] 2025-04-29 19:33:13,128 | INFO     | number of running child processes to parent process 1732256: 1
[2025-04-29 21:33:37] 2025-04-29 19:33:13,128 | INFO     | maximum number of monitored processes: 6
[2025-04-29 21:33:37] 2025-04-29 19:33:14,019 | INFO     | job 6621016239 has state=finished
[2025-04-29 21:33:37] 2025-04-29 19:33:14,020 | INFO     | preparing for final server update for job 6621016239 in state='finished'
[2025-04-29 21:33:37] 2025-04-29 19:33:14,020 | INFO     | this job has now completed (state=finished)
[2025-04-29 21:33:37] 2025-04-29 19:33:14,021 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-29 21:33:37] 2025-04-29 19:33:14,021 | INFO     | log transfer has been attempted: DONE
[2025-04-29 21:33:37] 2025-04-29 19:33:14,021 | INFO     | job 6621016239 has finished - writing final server update
[2025-04-29 21:33:37] 2025-04-29 19:33:14,021 | INFO     | total number of processed events: 400 (read)
[2025-04-29 21:33:37] 2025-04-29 19:33:14,023 | INFO     | executing command: lscpu
[2025-04-29 21:33:37] 2025-04-29 19:33:14,047 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-29 21:33:37] 2025-04-29 19:33:15,631 | INFO     | monitor loop #386: job 0:6621016239 is in state 'finished'
[2025-04-29 21:33:37] 2025-04-29 19:33:15,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 21:33:37] 2025-04-29 19:33:17,926 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-29 21:33:37] 2025-04-29 19:33:17,926 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6621016239/memory_monitor_summary.json (trf name=prmon)
[2025-04-29 21:33:37] 2025-04-29 19:33:17,927 | INFO     | extracted standard info from prmon json
[2025-04-29 21:33:37] 2025-04-29 19:33:17,927 | INFO     | extracted standard memory fields from prmon json
[2025-04-29 21:33:37] 2025-04-29 19:33:17,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-29 21:33:37] 2025-04-29 19:33:17,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-29 21:33:37] 2025-04-29 19:33:17,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-29 21:33:37] 2025-04-29 19:33:17,928 | INFO     | fitting pss+swap vs Time
[2025-04-29 21:33:37] 2025-04-29 19:33:17,929 | INFO     | sum of square deviations: 233641590.0
[2025-04-29 21:33:37] 2025-04-29 19:33:17,929 | INFO     | sum of deviations: -8153793444.999998
[2025-04-29 21:33:37] 2025-04-29 19:33:17,929 | INFO     | mean x: 1745952298.0
[2025-04-29 21:33:37] 2025-04-29 19:33:17,929 | INFO     | mean y: 2377034.835164835
[2025-04-29 21:33:37] 2025-04-29 19:33:17,929 | INFO     | -- intersect: 60933885002.723434
[2025-04-29 21:33:37] 2025-04-29 19:33:17,929 | INFO     | intersect: 60933885002.723434
[2025-04-29 21:33:37] 2025-04-29 19:33:17,929 | INFO     | chi2: 0.1447981622515549
[2025-04-29 21:33:37] 2025-04-29 19:33:17,929 | INFO     | -- intersect: 60933885002.723434
[2025-04-29 21:33:37] 2025-04-29 19:33:17,929 | INFO     | current memory leak: -34.90 B/s (using 91 data points, chi2=0.14)
[2025-04-29 21:33:37] 2025-04-29 19:33:17,929 | INFO     | ..............................
[2025-04-29 21:33:37] 2025-04-29 19:33:17,930 | INFO     | . Timing measurements:
[2025-04-29 21:33:37] 2025-04-29 19:33:17,930 | INFO     | . get job = 0 s
[2025-04-29 21:33:37] 2025-04-29 19:33:17,930 | INFO     | . initial setup = 1 s
[2025-04-29 21:33:37] 2025-04-29 19:33:17,930 | INFO     | . payload setup = 3 s
[2025-04-29 21:33:37] 2025-04-29 19:33:17,930 | INFO     | . stage-in = 0 s
[2025-04-29 21:33:37] 2025-04-29 19:33:17,930 | INFO     | . payload execution = 5942 s
[2025-04-29 21:33:37] 2025-04-29 19:33:17,930 | INFO     | . stage-out = 0 s
[2025-04-29 21:33:37] 2025-04-29 19:33:17,930 | INFO     | . log creation = 0 s
[2025-04-29 21:33:37] 2025-04-29 19:33:17,930 | INFO     | ..............................
[2025-04-29 21:33:37] 2025-04-29 19:33:17,979 | INFO     | 
[2025-04-29 21:33:37] 2025-04-29 19:33:17,979 | INFO     | job summary report
[2025-04-29 21:33:37] 2025-04-29 19:33:17,979 | INFO     | --------------------------------------------------
[2025-04-29 21:33:37] 2025-04-29 19:33:17,979 | INFO     | PanDA job id: 6621016239
[2025-04-29 21:33:37] 2025-04-29 19:33:17,979 | INFO     | task id: 44292257
[2025-04-29 21:33:37] 2025-04-29 19:33:17,979 | INFO     | errors: (none)
[2025-04-29 21:33:37] 2025-04-29 19:33:17,979 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | pilot state: finished 
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | transexitcode: 0
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | exeerrorcode: 0
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | exeerrordiag: 
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | exitcode: 0
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | exitmsg: OK
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | cpuconsumptiontime: 22457 s
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | nevents: 400
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | neventsw: 0
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | pid: 1732256
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | pgrp: 1732256
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | corecount: 4
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | event service: False
[2025-04-29 21:33:37] 2025-04-29 19:33:17,980 | INFO     | sizes: {0: 2392902, 1: 2393772, 3: 2393978, 11: 2394006, 5948: 2420306, 5949: 2429275, 5950: 2429459, 5956: 2429629}
[2025-04-29 21:33:37] 2025-04-29 19:33:17,981 | INFO     | --------------------------------------------------
[2025-04-29 21:33:37] 2025-04-29 19:33:17,981 | INFO     | 
[2025-04-29 21:33:37] 2025-04-29 19:33:17,981 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-04-29 21:33:37] 2025-04-29 19:33:17,995 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,995 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,995 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | job 6621016239 has completed (purged errors)
[2025-04-29 21:33:37] 2025-04-29 19:33:17,996 | INFO     | overall cleanup function is called
[2025-04-29 21:33:37] 2025-04-29 19:33:19,003 | INFO     | --- collectZombieJob: --- 10, [1732256]
[2025-04-29 21:33:37] 2025-04-29 19:33:19,003 | INFO     | zombie collector waiting for pid 1732256
[2025-04-29 21:33:37] 2025-04-29 19:33:19,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 21:33:37] 2025-04-29 19:33:19,003 | INFO     | collected zombie processes
[2025-04-29 21:33:37] 2025-04-29 19:33:19,003 | INFO     | will attempt to kill all subprocesses of pid=1732256
[2025-04-29 21:33:37] 2025-04-29 19:33:19,071 | INFO     | process IDs to be killed: [1732256] (in reverse order)
[2025-04-29 21:33:37] 2025-04-29 19:33:19,100 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 21:33:37] 2025-04-29 19:33:19,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 21:33:37] 2025-04-29 19:33:19,103 | INFO     | did not find any defunct processes belonging to 1732256
[2025-04-29 21:33:37] 2025-04-29 19:33:19,104 | INFO     | did not find any defunct processes belonging to 1732256
[2025-04-29 21:33:37] 2025-04-29 19:33:19,104 | INFO     | ready for new job
[2025-04-29 21:33:37] 2025-04-29 19:33:19,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 21:33:37] 2025-04-29 19:33:19,105 | INFO     | **************************************
[2025-04-29 21:33:37] 2025-04-29 19:33:19,105 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 21:33:37] 2025-04-29 19:33:19,105 | INFO     | **************************************
[2025-04-29 21:33:37] 2025-04-29 19:33:19,105 | INFO     | 
[2025-04-29 21:33:37] 2025-04-29 19:33:19,106 | INFO     | pilot is running in a VM
[2025-04-29 21:33:37] 2025-04-29 19:33:19,106 | INFO     | architecture information:
[2025-04-29 21:33:37] 2025-04-29 19:33:19,106 | INFO     | executing command: cat /etc/os-release
[2025-04-29 21:33:37] 2025-04-29 19:33:19,119 | INFO     | cat /etc/os-release:
[2025-04-29 21:33:37] NAME="CentOS Linux"
[2025-04-29 21:33:37] VERSION="7 (Core)"
[2025-04-29 21:33:37] ID="centos"
[2025-04-29 21:33:37] ID_LIKE="rhel fedora"
[2025-04-29 21:33:37] VERSION_ID="7"
[2025-04-29 21:33:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 21:33:37] ANSI_COLOR="0;31"
[2025-04-29 21:33:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 21:33:37] HOME_URL="https://www.centos.org/"
[2025-04-29 21:33:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 21:33:37] 
[2025-04-29 21:33:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 21:33:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 21:33:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 21:33:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 21:33:37] 
[2025-04-29 21:33:37] 2025-04-29 19:33:19,119 | INFO     | **************************************
[2025-04-29 21:33:37] 2025-04-29 19:33:19,622 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-04-29 21:33:37] 2025-04-29 19:33:19,632 | INFO     | sufficient remaining disk space (61290315776 B)
[2025-04-29 21:33:37] 2025-04-29 19:33:19,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 21:33:37] 2025-04-29 19:33:19,633 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 21:33:37] 2025-04-29 19:33:19,633 | INFO     | update_server=False
[2025-04-29 21:33:37] 2025-04-29 19:33:19,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 21:33:37] 2025-04-29 19:33:19,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 21:33:37] 2025-04-29 19:33:19,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 21:33:37] 2025-04-29 19:33:19,634 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-29 21:33:37] 2025-04-29 19:33:19,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 21:33:37] 2025-04-29 19:33:19,634 | INFO     | aborting loop
[2025-04-29 21:33:37] 2025-04-29 19:33:19,635 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 21:33:37] 2025-04-29 19:33:19,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 21:33:37] 2025-04-29 19:33:19,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 21:33:37] 2025-04-29 19:33:19,769 | INFO     | all data control threads have been joined
[2025-04-29 21:33:37] 2025-04-29 19:33:19,970 | INFO     | all payload control threads have been joined
[2025-04-29 21:33:37] 2025-04-29 19:33:20,638 | INFO     | [job] queue monitor thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:20,638 | INFO     | [job] retrieve thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:20,641 | INFO     | [job] job monitor thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:20,775 | INFO     | [data] control thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:20,957 | INFO     | [payload] validate_post thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:20,976 | INFO     | [payload] control thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:21,171 | INFO     | [payload] failed_post thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:21,277 | INFO     | all job control threads have been joined
[2025-04-29 21:33:37] 2025-04-29 19:33:21,292 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:21,430 | INFO     | [job] validate thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:21,583 | INFO     | [data] copytool_in thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:21,641 | INFO     | [data] copytool_out thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:21,805 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:21,840 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:22,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 21:33:37] 2025-04-29 19:33:22,283 | INFO     | [job] control thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:26,246 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:30,237 | INFO     | job.realtimelogging is not enabled
[2025-04-29 21:33:37] 2025-04-29 19:33:31,242 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 21:33:37] 2025-04-29 19:33:32,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132337039857472)>', '<ExcThread(monitor, started 132336597337856)>']
[2025-04-29 21:33:37] 2025-04-29 19:33:32,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 21:33:37] 2025-04-29 19:33:32,697 | INFO     | [monitor] control thread has ended
[2025-04-29 21:33:37] 2025-04-29 19:33:37,446 | INFO     | all workflow threads have been joined
[2025-04-29 21:33:37] 2025-04-29 19:33:37,446 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 21:33:37] 2025-04-29 19:33:37,448 | INFO     | traces error code: 0
[2025-04-29 21:33:37] 2025-04-29 19:33:37,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 21:33:37] 2025-04-29 19:33:37,523 [wrapper] ==== pilot stdout END ====
[2025-04-29 21:33:37] 2025-04-29 19:33:37,528 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 21:33:37] 2025-04-29 19:33:37,530 [wrapper] pilotpid: 1725726
[2025-04-29 21:33:37] 2025-04-29 19:33:37,534 [wrapper] Pilot exit status: 0
[2025-04-29 21:33:37] 2025-04-29 19:33:37,546 [wrapper] pandaids: 6621016239
[2025-04-29 21:33:37] 2025-04-29 19:33:37,571 [wrapper] cleanup supervisor_pilot 1768239 1725727
[2025-04-29 21:33:37] 2025-04-29 19:33:37,574 [wrapper] Test setup, not cleaning
[2025-04-29 21:33:37] 2025-04-29 19:33:37,577 [wrapper] apfmon messages muted
[2025-04-29 21:33:37] 2025-04-29 19:33:37,581 [wrapper] ==== wrapper stdout END ====
[2025-04-29 21:33:37] 2025-04-29 19:33:37,584 [wrapper] ==== wrapper stderr END ====
[2025-04-29 21:33:37]  *** Error codes and diagnostics ***
[2025-04-29 21:33:37]     "exeErrorCode": 0,
[2025-04-29 21:33:37]     "exeErrorDiag": "",
[2025-04-29 21:33:37]     "pilotErrorCode": 0,
[2025-04-29 21:33:37]     "pilotErrorDiag": "",
[2025-04-29 21:33:37]  *** Listing of results directory ***
[2025-04-29 21:33:37] insgesamt 229896
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc    495897 Apr 29 12:36 pilot3.tar.gz
[2025-04-29 21:33:37] -rwx------ 1 yeti boinc     37140 Apr 29 12:54 runpilot2-wrapper.sh
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc      5111 Apr 29 12:54 queuedata.json
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc       100 Apr 29 19:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 21:33:37] -rwxr-xr-x 1 yeti boinc      7986 Apr 29 19:53 run_atlas
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc       105 Apr 29 19:53 job.xml
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc      6653 Apr 29 19:53 init_data.xml
[2025-04-29 21:33:37] -rw-r--r-- 2 yeti boinc  29182997 Apr 29 19:53 EVNT.44292255._004271.pool.root.1
[2025-04-29 21:33:37] -rw-r--r-- 2 yeti boinc     17569 Apr 29 19:53 start_atlas.sh
[2025-04-29 21:33:37] drwxrwx--x 2 yeti boinc      4096 Apr 29 19:53 shared
[2025-04-29 21:33:37] -rw-r--r-- 2 yeti boinc    508883 Apr 29 19:53 input.tar.gz
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc         0 Apr 29 19:53 boinc_lockfile
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc      2550 Apr 29 19:53 pandaJob.out
[2025-04-29 21:33:37] -rw------- 1 yeti boinc       462 Apr 29 19:53 setup.sh.local
[2025-04-29 21:33:37] -rw------- 1 yeti boinc    989902 Apr 29 19:53 agis_schedconf.cvmfs.json
[2025-04-29 21:33:37] -rw------- 1 yeti boinc   1596659 Apr 29 19:53 agis_ddmendpoints.agis.ALL.json
[2025-04-29 21:33:37] drwx------ 4 yeti boinc      4096 Apr 29 19:53 pilot3
[2025-04-29 21:33:37] -rw------- 1 yeti boinc        95 Apr 29 21:32 pilot_heartbeat.json
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc       529 Apr 29 21:32 boinc_task_state.xml
[2025-04-29 21:33:37] -rw------- 1 yeti boinc 200855119 Apr 29 21:32 HITS.44292257._038222.pool.root.1
[2025-04-29 21:33:37] -rw------- 1 yeti boinc      1025 Apr 29 21:33 memory_monitor_summary.json
[2025-04-29 21:33:37] -rw------- 1 yeti boinc    239085 Apr 29 21:33 log.44292257._038222.job.log.tgz.1
[2025-04-29 21:33:37] -rw------- 1 yeti boinc      7670 Apr 29 21:33 heartbeat.json
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc        27 Apr 29 21:33 wrapper_checkpoint.txt
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc      8192 Apr 29 21:33 boinc_mmap_file
[2025-04-29 21:33:37] -rw------- 1 yeti boinc      4624 Apr 29 21:33 pilotlog.txt
[2025-04-29 21:33:37] -rw------- 1 yeti boinc    532349 Apr 29 21:33 log.44292257._038222.job.log.1
[2025-04-29 21:33:37] -rw------- 1 yeti boinc       357 Apr 29 21:33 output.list
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc       620 Apr 29 21:33 runtime_log
[2025-04-29 21:33:37] -rw------- 1 yeti boinc    788480 Apr 29 21:33 result.tar.gz
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc     11616 Apr 29 21:33 runtime_log.err
[2025-04-29 21:33:37] -rw------- 1 yeti boinc       638 Apr 29 21:33 FNcNDmSmxT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmodDLDmyoD8Nm.diag
[2025-04-29 21:33:37] -rw-r--r-- 1 yeti boinc     21147 Apr 29 21:33 stderr.txt
[2025-04-29 21:33:37] HITS file was successfully produced:
[2025-04-29 21:33:37] -rw------- 1 yeti boinc 200855119 Apr 29 21:32 shared/HITS.pool.root.1
[2025-04-29 21:33:37]  *** Contents of shared directory: ***
[2025-04-29 21:33:37] insgesamt 225944
[2025-04-29 21:33:37] -rw-r--r-- 2 yeti boinc  29182997 Apr 29 19:53 ATLAS.root_0
[2025-04-29 21:33:37] -rw-r--r-- 2 yeti boinc     17569 Apr 29 19:53 start_atlas.sh
[2025-04-29 21:33:37] -rw-r--r-- 2 yeti boinc    508883 Apr 29 19:53 input.tar.gz
[2025-04-29 21:33:37] -rw------- 1 yeti boinc 200855119 Apr 29 21:32 HITS.pool.root.1
[2025-04-29 21:33:37] -rw------- 1 yeti boinc    788480 Apr 29 21:33 result.tar.gz
21:33:39 (1722014): run_atlas exited; CPU time 22522.751970
21:33:39 (1722014): called boinc_finish(0)

</stderr_txt>
]]>

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