Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:28:02 (4044731): wrapper (7.7.26015): starting
09:28:02 (4044731): wrapper: running run_atlas (--nthreads 10)
[2025-04-29 09:28:02] Arguments: --nthreads 10
[2025-04-29 09:28:02] Threads: 10
[2025-04-29 09:28:02] Checking for CVMFS
[2025-04-29 09:28:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 09:28:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 09:28:02] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 09:28:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 09:28:03] 2.12.6.0 3048819 58642 206300 145416 2 133 29509526 32935936 11922 130560 0 151303375 99.594 177546366 26319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-29 09:28:03] CVMFS is ok
[2025-04-29 09:28:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-29 09:28:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-29 09:28:03] Further information can be found at the LHC@home message board.
[2025-04-29 09:28:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 09:28:03] Checking for apptainer binary...
[2025-04-29 09:28:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-29 09:28:03] Running /usr/bin/apptainer --version
[2025-04-29 09:28:03] apptainer version 1.4.0-1.el9
[2025-04-29 09:28:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 09:28:03] c-8-14.aglt2.org
[2025-04-29 09:28:03] apptainer works
[2025-04-29 09:28:03] Set ATHENA_PROC_NUMBER=10
[2025-04-29 09:28:03] Set ATHENA_CORE_NUMBER=10
[2025-04-29 09:28:03] Starting ATLAS job with PandaID=6620613275
[2025-04-29 09:28:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 19:49:32]  *** The last 200 lines of the pilot log: ***
[2025-04-29 19:49:32] 2025-04-29 23:49:11,767 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-29 19:49:32] 2025-04-29 23:49:11,768 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6620613275/memory_monitor_summary.json (trf name=prmon)
[2025-04-29 19:49:32] 2025-04-29 23:49:11,769 | INFO     | extracted standard info from prmon json
[2025-04-29 19:49:32] 2025-04-29 23:49:11,769 | INFO     | extracted standard memory fields from prmon json
[2025-04-29 19:49:32] 2025-04-29 23:49:11,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-29 19:49:32] 2025-04-29 23:49:11,770 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-29 19:49:32] 2025-04-29 23:49:11,770 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-29 19:49:32] 2025-04-29 23:49:11,782 | INFO     | fitting pss+swap vs Time
[2025-04-29 19:49:32] 2025-04-29 23:49:11,784 | INFO     | sum of square deviations: 70034843617.99313
[2025-04-29 19:49:32] 2025-04-29 23:49:11,793 | INFO     | sum of deviations: 384870153116.8231
[2025-04-29 19:49:32] 2025-04-29 23:49:11,793 | INFO     | mean x: 1745951926.3366175
[2025-04-29 19:49:32] 2025-04-29 23:49:11,793 | INFO     | mean y: 2177415.0886699506
[2025-04-29 19:49:32] 2025-04-29 23:49:11,793 | INFO     | -- intersect: -9592543591.058434
[2025-04-29 19:49:32] 2025-04-29 23:49:11,793 | INFO     | intersect: -9592543591.058434
[2025-04-29 19:49:32] 2025-04-29 23:49:11,794 | INFO     | chi2: 6.1430968704708615
[2025-04-29 19:49:32] 2025-04-29 23:49:11,796 | INFO     | sum of square deviations: 68324009006.74166
[2025-04-29 19:49:32] 2025-04-29 23:49:11,805 | INFO     | sum of deviations: 480286418092.3051
[2025-04-29 19:49:32] 2025-04-29 23:49:11,805 | INFO     | mean x: 1745951773.8410597
[2025-04-29 19:49:32] 2025-04-29 23:49:11,805 | INFO     | mean y: 2185895.8990066224
[2025-04-29 19:49:32] 2025-04-29 23:49:11,805 | INFO     | -- intersect: -12271053567.219835
[2025-04-29 19:49:32] 2025-04-29 23:49:11,805 | INFO     | intersect: -12271053567.219835
[2025-04-29 19:49:32] 2025-04-29 23:49:11,806 | INFO     | chi2: 4.480768307390887
[2025-04-29 19:49:32] 2025-04-29 23:49:11,807 | INFO     | current chi2=4.480768307390887 (change=27.06010662261555 %)
[2025-04-29 19:49:32] 2025-04-29 23:49:11,807 | INFO     | sum of square deviations: 66641304909.77298
[2025-04-29 19:49:32] 2025-04-29 23:49:11,816 | INFO     | sum of deviations: 489923956565.0295
[2025-04-29 19:49:32] 2025-04-29 23:49:11,817 | INFO     | mean x: 1745951621.3472455
[2025-04-29 19:49:32] 2025-04-29 23:49:11,817 | INFO     | mean y: 2186766.83639399
[2025-04-29 19:49:32] 2025-04-29 23:49:11,817 | INFO     | -- intersect: -12833449141.849546
[2025-04-29 19:49:32] 2025-04-29 23:49:11,817 | INFO     | intersect: -12833449141.849546
[2025-04-29 19:49:32] 2025-04-29 23:49:11,818 | INFO     | chi2: 4.431976133799368
[2025-04-29 19:49:32] 2025-04-29 23:49:11,818 | INFO     | current chi2=4.431976133799368 (change=1.0889242702203188 %)
[2025-04-29 19:49:32] 2025-04-29 23:49:11,818 | INFO     | right removable region: 598
[2025-04-29 19:49:32] 2025-04-29 23:49:11,819 | INFO     | sum of square deviations: 68323698084.680214
[2025-04-29 19:49:32] 2025-04-29 23:49:11,838 | INFO     | sum of deviations: 252037353377.85736
[2025-04-29 19:49:32] 2025-04-29 23:49:11,839 | INFO     | mean x: 1745952078.8460264
[2025-04-29 19:49:32] 2025-04-29 23:49:11,839 | INFO     | mean y: 2189239.1490066224
[2025-04-29 19:49:32] 2025-04-29 23:49:11,839 | INFO     | -- intersect: -6438403899.289282
[2025-04-29 19:49:32] 2025-04-29 23:49:11,839 | INFO     | intersect: -6438403899.289282
[2025-04-29 19:49:32] 2025-04-29 23:49:11,840 | INFO     | chi2: 3.7954184736313614
[2025-04-29 19:49:32] 2025-04-29 23:49:11,840 | INFO     | current chi2=3.7954184736313614 (change=38.21652899736144 %)
[2025-04-29 19:49:32] 2025-04-29 23:49:11,841 | INFO     | sum of square deviations: 66640609255.546005
[2025-04-29 19:49:32] 2025-04-29 23:49:11,911 | INFO     | sum of deviations: 166175335382.461
[2025-04-29 19:49:32] 2025-04-29 23:49:11,967 | INFO     | mean x: 1745952231.3572621
[2025-04-29 19:49:32] 2025-04-29 23:49:11,967 | INFO     | mean y: 2197017.549248748
[2025-04-29 19:49:32] 2025-04-29 23:49:11,968 | INFO     | -- intersect: -4351517644.556777
[2025-04-29 19:49:32] 2025-04-29 23:49:11,968 | INFO     | intersect: -4351517644.556777
[2025-04-29 19:49:32] 2025-04-29 23:49:11,969 | INFO     | chi2: 2.9341436022213028
[2025-04-29 19:49:32] 2025-04-29 23:49:11,969 | INFO     | current chi2=2.9341436022213028 (change=22.692487729449564 %)
[2025-04-29 19:49:32] 2025-04-29 23:49:11,969 | INFO     | left removable region: 20
[2025-04-29 19:49:32] 2025-04-29 23:49:11,970 | INFO     | sum of square deviations: 59874044265.34951
[2025-04-29 19:49:32] 2025-04-29 23:49:12,109 | INFO     | sum of deviations: 177563884502.67133
[2025-04-29 19:49:32] 2025-04-29 23:49:12,110 | INFO     | mean x: 1745952200.8927336
[2025-04-29 19:49:32] 2025-04-29 23:49:12,110 | INFO     | mean y: 2216345.3979238756
[2025-04-29 19:49:32] 2025-04-29 23:49:12,110 | INFO     | -- intersect: -5175620875.227521
[2025-04-29 19:49:32] 2025-04-29 23:49:12,110 | INFO     | intersect: -5175620875.227521
[2025-04-29 19:49:32] 2025-04-29 23:49:12,111 | INFO     | chi2: 0.44694917609679324
[2025-04-29 19:49:32] 2025-04-29 23:49:12,111 | INFO     | -- intersect: -5175620875.227521
[2025-04-29 19:49:32] 2025-04-29 23:49:12,112 | INFO     | current memory leak: 2.97 B/s (using 578 data points, chi2=0.45)
[2025-04-29 19:49:32] 2025-04-29 23:49:12,164 | INFO     | ..............................
[2025-04-29 19:49:32] 2025-04-29 23:49:12,164 | INFO     | . Timing measurements:
[2025-04-29 19:49:32] 2025-04-29 23:49:12,164 | INFO     | . get job = 0 s
[2025-04-29 19:49:32] 2025-04-29 23:49:12,165 | INFO     | . initial setup = 5 s
[2025-04-29 19:49:32] 2025-04-29 23:49:12,165 | INFO     | . payload setup = 25 s
[2025-04-29 19:49:32] 2025-04-29 23:49:12,165 | INFO     | . stage-in = 0 s
[2025-04-29 19:49:32] 2025-04-29 23:49:12,165 | INFO     | . payload execution = 37137 s
[2025-04-29 19:49:32] 2025-04-29 23:49:12,165 | INFO     | . stage-out = 8 s
[2025-04-29 19:49:32] 2025-04-29 23:49:12,165 | INFO     | . log creation = 1 s
[2025-04-29 19:49:32] 2025-04-29 23:49:12,165 | INFO     | ..............................
[2025-04-29 19:49:32] 2025-04-29 23:49:12,705 | INFO     | 
[2025-04-29 19:49:32] 2025-04-29 23:49:12,706 | INFO     | job summary report
[2025-04-29 19:49:32] 2025-04-29 23:49:12,706 | INFO     | --------------------------------------------------
[2025-04-29 19:49:32] 2025-04-29 23:49:12,706 | INFO     | PanDA job id: 6620613275
[2025-04-29 19:49:32] 2025-04-29 23:49:12,706 | INFO     | task id: 44270688
[2025-04-29 19:49:32] 2025-04-29 23:49:12,706 | INFO     | errors: (none)
[2025-04-29 19:49:32] 2025-04-29 23:49:12,706 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 19:49:32] 2025-04-29 23:49:12,706 | INFO     | pilot state: finished 
[2025-04-29 19:49:32] 2025-04-29 23:49:12,706 | INFO     | transexitcode: 0
[2025-04-29 19:49:32] 2025-04-29 23:49:12,706 | INFO     | exeerrorcode: 0
[2025-04-29 19:49:32] 2025-04-29 23:49:12,707 | INFO     | exeerrordiag: 
[2025-04-29 19:49:32] 2025-04-29 23:49:12,707 | INFO     | exitcode: 0
[2025-04-29 19:49:32] 2025-04-29 23:49:12,707 | INFO     | exitmsg: OK
[2025-04-29 19:49:32] 2025-04-29 23:49:12,707 | INFO     | cpuconsumptiontime: 86269 s
[2025-04-29 19:49:32] 2025-04-29 23:49:12,707 | INFO     | nevents: 400
[2025-04-29 19:49:32] 2025-04-29 23:49:12,707 | INFO     | neventsw: 0
[2025-04-29 19:49:32] 2025-04-29 23:49:12,707 | INFO     | pid: 4057966
[2025-04-29 19:49:32] 2025-04-29 23:49:12,707 | INFO     | pgrp: 4057966
[2025-04-29 19:49:32] 2025-04-29 23:49:12,707 | INFO     | corecount: 10
[2025-04-29 19:49:32] 2025-04-29 23:49:12,707 | INFO     | event service: False
[2025-04-29 19:49:32] 2025-04-29 23:49:12,708 | INFO     | sizes: {0: 2393563, 1: 2393591, 10: 2393797, 12: 2393825, 37169: 2433673, 37170: 2433672, 37179: 2442797, 37181: 2442853, 37212: 2443023}
[2025-04-29 19:49:32] 2025-04-29 23:49:12,708 | INFO     | --------------------------------------------------
[2025-04-29 19:49:32] 2025-04-29 23:49:12,708 | INFO     | 
[2025-04-29 19:49:32] 2025-04-29 23:49:12,708 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-29 19:49:32] 2025-04-29 23:49:12,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 19:49:32] 2025-04-29 23:49:12,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 19:49:32] 2025-04-29 23:49:12,973 | INFO     | job 6620613275 has completed (purged errors)
[2025-04-29 19:49:32] 2025-04-29 23:49:12,973 | INFO     | overall cleanup function is called
[2025-04-29 19:49:32] 2025-04-29 23:49:13,996 | INFO     | --- collectZombieJob: --- 10, [4057966]
[2025-04-29 19:49:32] 2025-04-29 23:49:13,996 | INFO     | zombie collector waiting for pid 4057966
[2025-04-29 19:49:32] 2025-04-29 23:49:13,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 19:49:32] 2025-04-29 23:49:13,997 | INFO     | collected zombie processes
[2025-04-29 19:49:32] 2025-04-29 23:49:13,997 | INFO     | will attempt to kill all subprocesses of pid=4057966
[2025-04-29 19:49:32] 2025-04-29 23:49:17,845 | INFO     | process IDs to be killed: [4057966] (in reverse order)
[2025-04-29 19:49:32] 2025-04-29 23:49:18,158 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 19:49:32] 2025-04-29 23:49:18,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 19:49:32] 2025-04-29 23:49:18,238 | INFO     | did not find any defunct processes belonging to 4057966
[2025-04-29 19:49:32] 2025-04-29 23:49:18,255 | INFO     | did not find any defunct processes belonging to 4057966
[2025-04-29 19:49:32] 2025-04-29 23:49:18,255 | INFO     | ready for new job
[2025-04-29 19:49:32] 2025-04-29 23:49:18,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 19:49:32] 2025-04-29 23:49:18,259 | INFO     | **************************************
[2025-04-29 19:49:32] 2025-04-29 23:49:18,259 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 19:49:32] 2025-04-29 23:49:18,259 | INFO     | **************************************
[2025-04-29 19:49:32] 2025-04-29 23:49:18,259 | INFO     | 
[2025-04-29 19:49:32] 2025-04-29 23:49:18,261 | INFO     | architecture information:
[2025-04-29 19:49:32] 2025-04-29 23:49:18,262 | INFO     | executing command: cat /etc/os-release
[2025-04-29 19:49:32] 2025-04-29 23:49:18,302 | INFO     | cat /etc/os-release:
[2025-04-29 19:49:32] NAME="CentOS Linux"
[2025-04-29 19:49:32] VERSION="7 (Core)"
[2025-04-29 19:49:32] ID="centos"
[2025-04-29 19:49:32] ID_LIKE="rhel fedora"
[2025-04-29 19:49:32] VERSION_ID="7"
[2025-04-29 19:49:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 19:49:32] ANSI_COLOR="0;31"
[2025-04-29 19:49:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 19:49:32] HOME_URL="https://www.centos.org/"
[2025-04-29 19:49:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 19:49:32] 
[2025-04-29 19:49:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 19:49:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 19:49:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 19:49:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 19:49:32] 
[2025-04-29 19:49:32] 2025-04-29 23:49:18,303 | INFO     | **************************************
[2025-04-29 19:49:32] 2025-04-29 23:49:18,810 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-29 19:49:32] 2025-04-29 23:49:19,015 | INFO     | sufficient remaining disk space (76252446720 B)
[2025-04-29 19:49:32] 2025-04-29 23:49:19,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 19:49:32] 2025-04-29 23:49:19,016 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 19:49:32] 2025-04-29 23:49:19,016 | INFO     | update_server=False
[2025-04-29 19:49:32] 2025-04-29 23:49:19,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 19:49:32] 2025-04-29 23:49:19,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 19:49:32] 2025-04-29 23:49:19,096 | INFO     | all job control threads have been joined
[2025-04-29 19:49:32] 2025-04-29 23:49:19,290 | INFO     | all payload control threads have been joined
[2025-04-29 19:49:32] 2025-04-29 23:49:19,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 19:49:32] 2025-04-29 23:49:19,423 | INFO     | aborting loop
[2025-04-29 19:49:32] 2025-04-29 23:49:19,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 19:49:32] 2025-04-29 23:49:19,685 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 19:49:32] 2025-04-29 23:49:19,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 19:49:32] 2025-04-29 23:49:19,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 19:49:32] 2025-04-29 23:49:19,796 | INFO     | all data control threads have been joined
[2025-04-29 19:49:32] 2025-04-29 23:49:20,021 | INFO     | [job] retrieve thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:20,049 | INFO     | [job] validate thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:20,102 | INFO     | [job] control thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:20,123 | INFO     | [payload] validate_post thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:20,124 | INFO     | [payload] failed_post thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:20,207 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:20,296 | INFO     | [payload] control thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:20,429 | INFO     | [job] job monitor thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:20,802 | INFO     | [data] control thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:20,991 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:21,023 | INFO     | [data] copytool_out thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:21,142 | INFO     | [data] copytool_in thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:21,499 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:21,500 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:21,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 19:49:32] 2025-04-29 23:49:22,879 | INFO     | [job] queue monitor thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:23,657 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 19:49:32] 2025-04-29 23:49:25,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920951076672)>', '<ExcThread(monitor, started 139920077211392)>']
[2025-04-29 19:49:32] 2025-04-29 23:49:25,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 19:49:32] 2025-04-29 23:49:25,752 | INFO     | [monitor] control thread has ended
[2025-04-29 19:49:32] 2025-04-29 23:49:30,778 | INFO     | all workflow threads have been joined
[2025-04-29 19:49:32] 2025-04-29 23:49:30,778 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 19:49:32] 2025-04-29 23:49:30,779 | INFO     | traces error code: 0
[2025-04-29 19:49:32] 2025-04-29 23:49:30,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 19:49:32] 2025-04-29 23:49:31,918 [wrapper] ==== pilot stdout END ====
[2025-04-29 19:49:32] 2025-04-29 23:49:31,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 19:49:32] 2025-04-29 23:49:31,926 [wrapper] pilotpid: 4049051
[2025-04-29 19:49:32] 2025-04-29 23:49:31,929 [wrapper] Pilot exit status: 0
[2025-04-29 19:49:32] 2025-04-29 23:49:31,947 [wrapper] pandaids: 6620613275
[2025-04-29 19:49:32] 2025-04-29 23:49:32,072 [wrapper] cleanup supervisor_pilot 4139998 4049052
[2025-04-29 19:49:32] 2025-04-29 23:49:32,131 [wrapper] Test setup, not cleaning
[2025-04-29 19:49:32] 2025-04-29 23:49:32,181 [wrapper] apfmon messages muted
[2025-04-29 19:49:32] 2025-04-29 23:49:32,196 [wrapper] ==== wrapper stdout END ====
[2025-04-29 19:49:32] 2025-04-29 23:49:32,199 [wrapper] ==== wrapper stderr END ====
[2025-04-29 19:49:32]  *** Error codes and diagnostics ***
[2025-04-29 19:49:32]     "exeErrorCode": 0,
[2025-04-29 19:49:32]     "exeErrorDiag": "",
[2025-04-29 19:49:32]     "pilotErrorCode": 0,
[2025-04-29 19:49:32]     "pilotErrorDiag": "",
[2025-04-29 19:49:32]  *** Listing of results directory ***
[2025-04-29 19:49:32] total 426124
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas    495897 Apr 29 00:52 pilot3.tar.gz
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas      5111 Apr 29 01:05 queuedata.json
[2025-04-29 19:49:32] -rwx------. 1 boincer umatlas     37140 Apr 29 01:05 runpilot2-wrapper.sh
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas       100 Apr 29 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 19:49:32] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 29 09:28 run_atlas
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas       105 Apr 29 09:28 job.xml
[2025-04-29 19:49:32] -rw-r--r--. 2 boincer umatlas 217990086 Apr 29 09:28 EVNT.44270686._000180.pool.root.1
[2025-04-29 19:49:32] -rw-r--r--. 2 boincer umatlas     17569 Apr 29 09:28 start_atlas.sh
[2025-04-29 19:49:32] drwxrwx--x. 2 boincer umatlas      4096 Apr 29 09:28 shared
[2025-04-29 19:49:32] -rw-r--r--. 2 boincer umatlas    508853 Apr 29 09:28 input.tar.gz
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas         0 Apr 29 09:28 boinc_lockfile
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas      2466 Apr 29 09:28 pandaJob.out
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas       467 Apr 29 09:28 setup.sh.local
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas    997501 Apr 29 09:28 agis_schedconf.cvmfs.json
[2025-04-29 19:49:32] drwx------. 4 boincer umatlas      4096 Apr 29 09:28 pilot3
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas 207787017 Apr 29 19:46 HITS.44270688._004478.pool.root.1
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas       531 Apr 29 19:46 boinc_task_state.xml
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas      6660 Apr 29 19:47 init_data.xml
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas      1056 Apr 29 19:48 memory_monitor_summary.json
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas   1596659 Apr 29 19:48 agis_ddmendpoints.agis.ALL.json
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas    596602 Apr 29 19:48 log.44270688._004478.job.log.tgz.1
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas        95 Apr 29 19:48 pilot_heartbeat.json
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas      7737 Apr 29 19:49 heartbeat.json
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas      4353 Apr 29 19:49 pilotlog.txt
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas      8192 Apr 29 19:49 boinc_mmap_file
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas        28 Apr 29 19:49 wrapper_checkpoint.txt
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas   2767985 Apr 29 19:49 log.44270688._004478.job.log.1
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas       357 Apr 29 19:49 output.list
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas       620 Apr 29 19:49 runtime_log
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas   3379200 Apr 29 19:49 result.tar.gz
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas     11411 Apr 29 19:49 runtime_log.err
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas       661 Apr 29 19:49 0TKKDmuKsT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmARDLDmx4sNEm.diag
[2025-04-29 19:49:32] -rw-r--r--. 1 boincer umatlas     20923 Apr 29 19:49 stderr.txt
[2025-04-29 19:49:32] HITS file was successfully produced:
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas 207787017 Apr 29 19:46 shared/HITS.pool.root.1
[2025-04-29 19:49:32]  *** Contents of shared directory: ***
[2025-04-29 19:49:32] total 419632
[2025-04-29 19:49:32] -rw-r--r--. 2 boincer umatlas 217990086 Apr 29 09:28 ATLAS.root_0
[2025-04-29 19:49:32] -rw-r--r--. 2 boincer umatlas     17569 Apr 29 09:28 start_atlas.sh
[2025-04-29 19:49:32] -rw-r--r--. 2 boincer umatlas    508853 Apr 29 09:28 input.tar.gz
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas 207787017 Apr 29 19:46 HITS.pool.root.1
[2025-04-29 19:49:32] -rw-------. 1 boincer umatlas   3379200 Apr 29 19:49 result.tar.gz
19:49:34 (4044731): run_atlas exited; CPU time 87719.332780
19:49:34 (4044731): called boinc_finish(0)

</stderr_txt>
]]>

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