Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:35:23 (3228976): wrapper (7.7.26015): starting
15:35:23 (3228976): wrapper: running run_atlas (--nthreads 12)
[2025-04-29 15:35:23] Arguments: --nthreads 12
[2025-04-29 15:35:23] Threads: 12
[2025-04-29 15:35:23] Checking for CVMFS
[2025-04-29 15:35:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 15:35:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 15:35:24] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 15:35:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 15:35:26] 2.12.7.0 5133 2620 134580 145421 1 230 4075909 4096001 16637 130560 0 27927912 99.981 1776753 793 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-29 15:35:26] CVMFS is ok
[2025-04-29 15:35:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 15:35:26] Checking for apptainer binary...
[2025-04-29 15:35:26] apptainer is not installed, using version from CVMFS
[2025-04-29 15:35:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 15:35:27] epyc7v12
[2025-04-29 15:35:27] apptainer works
[2025-04-29 15:35:27] Set ATHENA_PROC_NUMBER=12
[2025-04-29 15:35:27] Set ATHENA_CORE_NUMBER=12
[2025-04-29 15:35:27] Starting ATLAS job with PandaID=6620434779
[2025-04-29 15:35:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 19:36:20]  *** The last 200 lines of the pilot log: ***
[2025-04-29 19:36:20] 2025-04-29 19:36:00,926 | INFO     | sum of square deviations: 3772724685.06523
[2025-04-29 19:36:20] 2025-04-29 19:36:00,928 | INFO     | sum of deviations: 202164908077.19556
[2025-04-29 19:36:20] 2025-04-29 19:36:00,928 | INFO     | mean x: 1745948248.5434783
[2025-04-29 19:36:20] 2025-04-29 19:36:00,928 | INFO     | mean y: 2517519.6304347827
[2025-04-29 19:36:20] 2025-04-29 19:36:00,928 | INFO     | -- intersect: -93555718672.79665
[2025-04-29 19:36:20] 2025-04-29 19:36:00,929 | INFO     | intersect: -93555718672.79665
[2025-04-29 19:36:20] 2025-04-29 19:36:00,929 | INFO     | chi2: 8.778745830221611
[2025-04-29 19:36:20] 2025-04-29 19:36:00,929 | INFO     | sum of square deviations: 3531988337.5555615
[2025-04-29 19:36:20] 2025-04-29 19:36:00,935 | INFO     | sum of deviations: 213893147716.8443
[2025-04-29 19:36:20] 2025-04-29 19:36:00,935 | INFO     | mean x: 1745948096.0444446
[2025-04-29 19:36:20] 2025-04-29 19:36:00,936 | INFO     | mean y: 2524759.7155555557
[2025-04-29 19:36:20] 2025-04-29 19:36:00,936 | INFO     | -- intersect: -105730082010.90427
[2025-04-29 19:36:20] 2025-04-29 19:36:00,936 | INFO     | intersect: -105730082010.90427
[2025-04-29 19:36:20] 2025-04-29 19:36:00,936 | INFO     | chi2: 7.971481949075174
[2025-04-29 19:36:20] 2025-04-29 19:36:00,936 | INFO     | current chi2=7.971481949075174 (change=9.19566298829794 %)
[2025-04-29 19:36:20] 2025-04-29 19:36:00,936 | INFO     | right removable region: 224
[2025-04-29 19:36:20] 2025-04-29 19:36:00,937 | INFO     | sum of square deviations: 3531982237.5555615
[2025-04-29 19:36:20] 2025-04-29 19:36:00,943 | INFO     | sum of deviations: 126037527521.73334
[2025-04-29 19:36:20] 2025-04-29 19:36:00,946 | INFO     | mean x: 1745948401.0444446
[2025-04-29 19:36:20] 2025-04-29 19:36:00,946 | INFO     | mean y: 2565683.2266666666
[2025-04-29 19:36:20] 2025-04-29 19:36:00,946 | INFO     | -- intersect: -62300980837.568596
[2025-04-29 19:36:20] 2025-04-29 19:36:00,946 | INFO     | intersect: -62300980837.568596
[2025-04-29 19:36:20] 2025-04-29 19:36:00,947 | INFO     | chi2: 4.626345456456868
[2025-04-29 19:36:20] 2025-04-29 19:36:00,947 | INFO     | current chi2=4.626345456456868 (change=47.30061052080739 %)
[2025-04-29 19:36:20] 2025-04-29 19:36:00,947 | INFO     | sum of square deviations: 3301705102.5454593
[2025-04-29 19:36:20] 2025-04-29 19:36:00,949 | INFO     | sum of deviations: 71143036312.2728
[2025-04-29 19:36:20] 2025-04-29 19:36:00,949 | INFO     | mean x: 1745948553.5454545
[2025-04-29 19:36:20] 2025-04-29 19:36:00,949 | INFO     | mean y: 2602020.672727273
[2025-04-29 19:36:20] 2025-04-29 19:36:00,949 | INFO     | -- intersect: -37617984157.20329
[2025-04-29 19:36:20] 2025-04-29 19:36:00,949 | INFO     | intersect: -37617984157.20329
[2025-04-29 19:36:20] 2025-04-29 19:36:00,950 | INFO     | chi2: 2.66836831585304
[2025-04-29 19:36:20] 2025-04-29 19:36:00,958 | INFO     | current chi2=2.66836831585304 (change=42.322328910201264 %)
[2025-04-29 19:36:20] 2025-04-29 19:36:00,959 | INFO     | sum of square deviations: 3081660717.534897
[2025-04-29 19:36:20] 2025-04-29 19:36:00,960 | INFO     | sum of deviations: 23606729267.55815
[2025-04-29 19:36:20] 2025-04-29 19:36:00,961 | INFO     | mean x: 1745948706.0465117
[2025-04-29 19:36:20] 2025-04-29 19:36:00,961 | INFO     | mean y: 2634912.1441860464
[2025-04-29 19:36:20] 2025-04-29 19:36:00,961 | INFO     | -- intersect: -13372016678.85035
[2025-04-29 19:36:20] 2025-04-29 19:36:00,961 | INFO     | intersect: -13372016678.85035
[2025-04-29 19:36:20] 2025-04-29 19:36:00,961 | INFO     | chi2: 1.1656284497814808
[2025-04-29 19:36:20] 2025-04-29 19:36:00,961 | INFO     | current chi2=1.1656284497814808 (change=56.31680818362417 %)
[2025-04-29 19:36:20] 2025-04-29 19:36:00,962 | INFO     | sum of square deviations: 2871616520.0238132
[2025-04-29 19:36:20] 2025-04-29 19:36:00,963 | INFO     | sum of deviations: 5252622478.095219
[2025-04-29 19:36:20] 2025-04-29 19:36:00,964 | INFO     | mean x: 1745948858.547619
[2025-04-29 19:36:20] 2025-04-29 19:36:00,964 | INFO     | mean y: 2648207.3904761905
[2025-04-29 19:36:20] 2025-04-29 19:36:00,964 | INFO     | -- intersect: -3190957260.4927716
[2025-04-29 19:36:20] 2025-04-29 19:36:00,964 | INFO     | intersect: -3190957260.4927716
[2025-04-29 19:36:20] 2025-04-29 19:36:00,964 | INFO     | chi2: 0.9552835279511416
[2025-04-29 19:36:20] 2025-04-29 19:36:00,964 | INFO     | current chi2=0.9552835279511416 (change=18.04562353207597 %)
[2025-04-29 19:36:20] 2025-04-29 19:36:00,964 | INFO     | left removable region: 40
[2025-04-29 19:36:20] 2025-04-29 19:36:00,965 | INFO     | sum of square deviations: 1931599657.4565222
[2025-04-29 19:36:20] 2025-04-29 19:36:00,970 | INFO     | sum of deviations: 6359367912.96739
[2025-04-29 19:36:20] 2025-04-29 19:36:00,970 | INFO     | mean x: 1745949285.5543478
[2025-04-29 19:36:20] 2025-04-29 19:36:00,970 | INFO     | mean y: 2670421.8532608696
[2025-04-29 19:36:20] 2025-04-29 19:36:00,971 | INFO     | -- intersect: -5745484389.295837
[2025-04-29 19:36:20] 2025-04-29 19:36:00,971 | INFO     | intersect: -5745484389.295837
[2025-04-29 19:36:20] 2025-04-29 19:36:00,971 | INFO     | chi2: 0.0002752044668055027
[2025-04-29 19:36:20] 2025-04-29 19:36:00,971 | INFO     | -- intersect: -5745484389.295837
[2025-04-29 19:36:20] 2025-04-29 19:36:00,971 | INFO     | current memory leak: 3.29 B/s (using 184 data points, chi2=0.00)
[2025-04-29 19:36:20] 2025-04-29 19:36:00,972 | INFO     | ..............................
[2025-04-29 19:36:20] 2025-04-29 19:36:00,972 | INFO     | . Timing measurements:
[2025-04-29 19:36:20] 2025-04-29 19:36:00,972 | INFO     | . get job = 0 s
[2025-04-29 19:36:20] 2025-04-29 19:36:00,972 | INFO     | . initial setup = 5 s
[2025-04-29 19:36:20] 2025-04-29 19:36:00,972 | INFO     | . payload setup = 66 s
[2025-04-29 19:36:20] 2025-04-29 19:36:00,973 | INFO     | . stage-in = 0 s
[2025-04-29 19:36:20] 2025-04-29 19:36:00,973 | INFO     | . payload execution = 14079 s
[2025-04-29 19:36:20] 2025-04-29 19:36:00,973 | INFO     | . stage-out = 13 s
[2025-04-29 19:36:20] 2025-04-29 19:36:00,973 | INFO     | . log creation = 0 s
[2025-04-29 19:36:20] 2025-04-29 19:36:00,973 | INFO     | ..............................
[2025-04-29 19:36:20] 2025-04-29 19:36:01,150 | INFO     | 
[2025-04-29 19:36:20] 2025-04-29 19:36:01,150 | INFO     | job summary report
[2025-04-29 19:36:20] 2025-04-29 19:36:01,150 | INFO     | --------------------------------------------------
[2025-04-29 19:36:20] 2025-04-29 19:36:01,150 | INFO     | PanDA job id: 6620434779
[2025-04-29 19:36:20] 2025-04-29 19:36:01,151 | INFO     | task id: 44270688
[2025-04-29 19:36:20] 2025-04-29 19:36:01,151 | INFO     | errors: (none)
[2025-04-29 19:36:20] 2025-04-29 19:36:01,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 19:36:20] 2025-04-29 19:36:01,151 | INFO     | pilot state: finished 
[2025-04-29 19:36:20] 2025-04-29 19:36:01,151 | INFO     | transexitcode: 0
[2025-04-29 19:36:20] 2025-04-29 19:36:01,151 | INFO     | exeerrorcode: 0
[2025-04-29 19:36:20] 2025-04-29 19:36:01,151 | INFO     | exeerrordiag: 
[2025-04-29 19:36:20] 2025-04-29 19:36:01,151 | INFO     | exitcode: 0
[2025-04-29 19:36:20] 2025-04-29 19:36:01,152 | INFO     | exitmsg: OK
[2025-04-29 19:36:20] 2025-04-29 19:36:01,152 | INFO     | cpuconsumptiontime: 80237 s
[2025-04-29 19:36:20] 2025-04-29 19:36:01,152 | INFO     | nevents: 400
[2025-04-29 19:36:20] 2025-04-29 19:36:01,152 | INFO     | neventsw: 0
[2025-04-29 19:36:20] 2025-04-29 19:36:01,152 | INFO     | pid: 3273102
[2025-04-29 19:36:20] 2025-04-29 19:36:01,152 | INFO     | pgrp: 3273102
[2025-04-29 19:36:20] 2025-04-29 19:36:01,152 | INFO     | corecount: 12
[2025-04-29 19:36:20] 2025-04-29 19:36:01,152 | INFO     | event service: False
[2025-04-29 19:36:20] 2025-04-29 19:36:01,152 | INFO     | sizes: {0: 2393412, 1: 2393496, 2: 2393695, 13: 2393695, 23: 2393751, 34: 2393779, 45: 2393935, 54: 2394169, 56: 2394197, 14149: 2424536, 14164: 2433553, 14167: 24
[2025-04-29 19:36:20] 2025-04-29 19:36:01,152 | INFO     | --------------------------------------------------
[2025-04-29 19:36:20] 2025-04-29 19:36:01,153 | INFO     | 
[2025-04-29 19:36:20] 2025-04-29 19:36:01,153 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/19
[2025-04-29 19:36:20] 2025-04-29 19:36:01,383 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,385 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 19:36:20] 2025-04-29 19:36:01,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,385 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 19:36:20] 2025-04-29 19:36:01,385 | INFO     | job 6620434779 has completed (purged errors)
[2025-04-29 19:36:20] 2025-04-29 19:36:01,385 | INFO     | overall cleanup function is called
[2025-04-29 19:36:20] 2025-04-29 19:36:02,410 | INFO     | --- collectZombieJob: --- 10, [3273102]
[2025-04-29 19:36:20] 2025-04-29 19:36:02,410 | INFO     | zombie collector waiting for pid 3273102
[2025-04-29 19:36:20] 2025-04-29 19:36:02,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 19:36:20] 2025-04-29 19:36:02,411 | INFO     | collected zombie processes
[2025-04-29 19:36:20] 2025-04-29 19:36:02,411 | INFO     | will attempt to kill all subprocesses of pid=3273102
[2025-04-29 19:36:20] 2025-04-29 19:36:03,700 | INFO     | process IDs to be killed: [3273102] (in reverse order)
[2025-04-29 19:36:20] 2025-04-29 19:36:05,639 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 19:36:20] 2025-04-29 19:36:05,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 19:36:20] 2025-04-29 19:36:05,679 | INFO     | did not find any defunct processes belonging to 3273102
[2025-04-29 19:36:20] 2025-04-29 19:36:05,718 | INFO     | did not find any defunct processes belonging to 3273102
[2025-04-29 19:36:20] 2025-04-29 19:36:05,722 | INFO     | ready for new job
[2025-04-29 19:36:20] 2025-04-29 19:36:05,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 19:36:20] 2025-04-29 19:36:05,724 | INFO     | **************************************
[2025-04-29 19:36:20] 2025-04-29 19:36:05,724 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 19:36:20] 2025-04-29 19:36:05,725 | INFO     | **************************************
[2025-04-29 19:36:20] 2025-04-29 19:36:05,725 | INFO     | 
[2025-04-29 19:36:20] 2025-04-29 19:36:05,765 | INFO     | architecture information:
[2025-04-29 19:36:20] 2025-04-29 19:36:05,766 | INFO     | executing command: cat /etc/os-release
[2025-04-29 19:36:20] 2025-04-29 19:36:05,863 | INFO     | cat /etc/os-release:
[2025-04-29 19:36:20] NAME="CentOS Linux"
[2025-04-29 19:36:20] VERSION="7 (Core)"
[2025-04-29 19:36:20] ID="centos"
[2025-04-29 19:36:20] ID_LIKE="rhel fedora"
[2025-04-29 19:36:20] VERSION_ID="7"
[2025-04-29 19:36:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 19:36:20] ANSI_COLOR="0;31"
[2025-04-29 19:36:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 19:36:20] HOME_URL="https://www.centos.org/"
[2025-04-29 19:36:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 19:36:20] 
[2025-04-29 19:36:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 19:36:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 19:36:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 19:36:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 19:36:20] 
[2025-04-29 19:36:20] 2025-04-29 19:36:05,863 | INFO     | **************************************
[2025-04-29 19:36:20] 2025-04-29 19:36:06,370 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/19
[2025-04-29 19:36:20] 2025-04-29 19:36:06,464 | INFO     | sufficient remaining disk space (323659759616 B)
[2025-04-29 19:36:20] 2025-04-29 19:36:06,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 19:36:20] 2025-04-29 19:36:06,464 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 19:36:20] 2025-04-29 19:36:06,464 | INFO     | update_server=False
[2025-04-29 19:36:20] 2025-04-29 19:36:06,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 19:36:20] 2025-04-29 19:36:06,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 19:36:20] 2025-04-29 19:36:06,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 19:36:20] 2025-04-29 19:36:06,774 | INFO     | aborting loop
[2025-04-29 19:36:20] 2025-04-29 19:36:06,950 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 19:36:20] 2025-04-29 19:36:06,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 19:36:20] 2025-04-29 19:36:06,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 19:36:20] 2025-04-29 19:36:07,098 | INFO     | all payload control threads have been joined
[2025-04-29 19:36:20] 2025-04-29 19:36:07,150 | INFO     | all data control threads have been joined
[2025-04-29 19:36:20] 2025-04-29 19:36:07,466 | INFO     | [job] retrieve thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:07,470 | INFO     | [job] queue monitor thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:07,494 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 19:36:20] 2025-04-29 19:36:07,590 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:07,630 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:07,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 19:36:20] 2025-04-29 19:36:07,782 | INFO     | [job] job monitor thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:07,850 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:08,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:08,102 | INFO     | [payload] control thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:08,154 | INFO     | [data] control thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:08,172 | INFO     | all job control threads have been joined
[2025-04-29 19:36:20] 2025-04-29 19:36:08,214 | INFO     | [payload] validate_post thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:08,306 | INFO     | [payload] failed_post thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:08,350 | INFO     | [job] validate thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:08,402 | INFO     | [data] copytool_in thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:09,178 | INFO     | [job] control thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:09,502 | INFO     | [data] copytool_out thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:11,714 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 19:36:20] 2025-04-29 19:36:13,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140700011415360)>', '<ExcThread(monitor, started 140699429234432)>']
[2025-04-29 19:36:20] 2025-04-29 19:36:13,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 19:36:20] 2025-04-29 19:36:13,978 | INFO     | [monitor] control thread has ended
[2025-04-29 19:36:20] 2025-04-29 19:36:18,518 | INFO     | all workflow threads have been joined
[2025-04-29 19:36:20] 2025-04-29 19:36:18,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 19:36:20] 2025-04-29 19:36:18,519 | INFO     | traces error code: 0
[2025-04-29 19:36:20] 2025-04-29 19:36:18,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 19:36:20] 2025-04-29 19:36:18,918 [wrapper] ==== pilot stdout END ====
[2025-04-29 19:36:20] 2025-04-29 19:36:18,939 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 19:36:20] 2025-04-29 19:36:18,974 [wrapper] pilotpid: 3243168
[2025-04-29 19:36:20] 2025-04-29 19:36:19,022 [wrapper] Pilot exit status: 0
[2025-04-29 19:36:20] 2025-04-29 19:36:19,186 [wrapper] pandaids: 6620434779
[2025-04-29 19:36:20] 2025-04-29 19:36:19,474 [wrapper] cleanup supervisor_pilot    2448 3243169
[2025-04-29 19:36:20] 2025-04-29 19:36:19,514 [wrapper] Test setup, not cleaning
[2025-04-29 19:36:20] 2025-04-29 19:36:19,558 [wrapper] apfmon messages muted
[2025-04-29 19:36:20] 2025-04-29 19:36:19,594 [wrapper] ==== wrapper stdout END ====
[2025-04-29 19:36:20] 2025-04-29 19:36:19,634 [wrapper] ==== wrapper stderr END ====
[2025-04-29 19:36:20]  *** Error codes and diagnostics ***
[2025-04-29 19:36:20]     "exeErrorCode": 0,
[2025-04-29 19:36:20]     "exeErrorDiag": "",
[2025-04-29 19:36:20]     "pilotErrorCode": 0,
[2025-04-29 19:36:20]     "pilotErrorDiag": "",
[2025-04-29 19:36:20]  *** Listing of results directory ***
[2025-04-29 19:36:20] total 419224
[2025-04-29 19:36:20] -rw-r--r-- 1 boinc boinc    495897 Apr 29 03:16 pilot3.tar.gz
[2025-04-29 19:36:20] -rw-r--r-- 1 boinc boinc      5111 Apr 29 03:17 queuedata.json
[2025-04-29 19:36:20] -rwx------ 1 boinc boinc     37140 Apr 29 03:18 runpilot2-wrapper.sh
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc       100 Apr 29 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 19:36:20] -rwxr-xr-x 1 boinc boinc      7986 Apr 29 15:35 run_atlas
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc       105 Apr 29 15:35 job.xml
[2025-04-29 19:36:20] -rw-r--r-- 2 boinc boinc     17569 Apr 29 15:35 start_atlas.sh
[2025-04-29 19:36:20] drwxrwx--x 2 boinc boinc      4096 Apr 29 15:35 shared
[2025-04-29 19:36:20] -rw-r--r-- 2 boinc boinc    508860 Apr 29 15:35 input.tar.gz
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc      6942 Apr 29 15:35 init_data.xml
[2025-04-29 19:36:20] -rw-r--r-- 2 boinc boinc 215403640 Apr 29 15:35 EVNT.44270686._000148.pool.root.1
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc         0 Apr 29 15:35 boinc_lockfile
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc      2467 Apr 29 15:35 pandaJob.out
[2025-04-29 19:36:20] -rw------- 1 boinc boinc       424 Apr 29 15:35 setup.sh.local
[2025-04-29 19:36:20] -rw------- 1 boinc boinc    989886 Apr 29 15:37 agis_schedconf.cvmfs.json
[2025-04-29 19:36:20] drwx------ 4 boinc boinc      4096 Apr 29 15:37 pilot3
[2025-04-29 19:36:20] -rw------- 1 boinc boinc 206640570 Apr 29 19:33 HITS.44270688._003693.pool.root.1
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc       531 Apr 29 19:33 boinc_task_state.xml
[2025-04-29 19:36:20] -rw------- 1 boinc boinc      1026 Apr 29 19:34 memory_monitor_summary.json
[2025-04-29 19:36:20] -rw------- 1 boinc boinc   1596659 Apr 29 19:35 agis_ddmendpoints.agis.ALL.json
[2025-04-29 19:36:20] -rw------- 1 boinc boinc    458377 Apr 29 19:35 log.44270688._003693.job.log.tgz.1
[2025-04-29 19:36:20] -rw------- 1 boinc boinc        95 Apr 29 19:35 pilot_heartbeat.json
[2025-04-29 19:36:20] -rw------- 1 boinc boinc      7654 Apr 29 19:36 heartbeat.json
[2025-04-29 19:36:20] -rw------- 1 boinc boinc      4378 Apr 29 19:36 pilotlog.txt
[2025-04-29 19:36:20] -rw------- 1 boinc boinc   1241544 Apr 29 19:36 log.44270688._003693.job.log.1
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc      8192 Apr 29 19:36 boinc_mmap_file
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc        28 Apr 29 19:36 wrapper_checkpoint.txt
[2025-04-29 19:36:20] -rw------- 1 boinc boinc       357 Apr 29 19:36 output.list
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc       620 Apr 29 19:36 runtime_log
[2025-04-29 19:36:20] -rw------- 1 boinc boinc   1720320 Apr 29 19:36 result.tar.gz
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc     11428 Apr 29 19:36 runtime_log.err
[2025-04-29 19:36:20] -rw------- 1 boinc boinc       657 Apr 29 19:36 mwaNDmqfqT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmnGwLDm46C9Im.diag
[2025-04-29 19:36:20] -rw-rw-r-- 1 boinc boinc     20624 Apr 29 19:36 stderr.txt
[2025-04-29 19:36:20] HITS file was successfully produced:
[2025-04-29 19:36:20] -rw------- 1 boinc boinc 206640570 Apr 29 19:33 shared/HITS.pool.root.1
[2025-04-29 19:36:20]  *** Contents of shared directory: ***
[2025-04-29 19:36:20] total 414364
[2025-04-29 19:36:20] -rw-r--r-- 2 boinc boinc     17569 Apr 29 15:35 start_atlas.sh
[2025-04-29 19:36:20] -rw-r--r-- 2 boinc boinc    508860 Apr 29 15:35 input.tar.gz
[2025-04-29 19:36:20] -rw-r--r-- 2 boinc boinc 215403640 Apr 29 15:35 ATLAS.root_0
[2025-04-29 19:36:20] -rw------- 1 boinc boinc 206640570 Apr 29 19:33 HITS.pool.root.1
[2025-04-29 19:36:20] -rw------- 1 boinc boinc   1720320 Apr 29 19:36 result.tar.gz
19:36:21 (3228976): run_atlas exited; CPU time 81037.561436
19:36:21 (3228976): called boinc_finish(0)

</stderr_txt>
]]>

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