Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-29 14:40:27 (19052): Detected: vboxwrapper 26206
2025-04-29 14:40:27 (19052): Detected: BOINC client v8.0.2
2025-04-29 14:40:28 (19052): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-29 14:40:28 (19052): Successfully copied 'init_data.xml' to the shared directory.
2025-04-29 14:40:29 (19052): Create VM. (boinc_7558ca90ba9ceea7, slot#0)
2025-04-29 14:40:29 (19052): Setting Memory Size for VM. (4400MB)
2025-04-29 14:40:29 (19052): Setting CPU Count for VM. (4)
2025-04-29 14:40:30 (19052): Setting Chipset Options for VM.
2025-04-29 14:40:30 (19052): Setting Graphics Controller Options for VM.
2025-04-29 14:40:30 (19052): Setting Boot Options for VM.
2025-04-29 14:40:31 (19052): Setting Network Configuration for NAT.
2025-04-29 14:40:31 (19052): Enabling VM Network Access.
2025-04-29 14:40:31 (19052): Disabling USB Support for VM.
2025-04-29 14:40:31 (19052): Disabling COM Port Support for VM.
2025-04-29 14:40:32 (19052): Disabling LPT Port Support for VM.
2025-04-29 14:40:32 (19052): Disabling Audio Support for VM.
2025-04-29 14:40:32 (19052): Disabling Clipboard Support for VM.
2025-04-29 14:40:32 (19052): Disabling Drag and Drop Support for VM.
2025-04-29 14:40:33 (19052): Adding storage controller(s) to VM.
2025-04-29 14:40:33 (19052): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-29 14:40:36 (19052): Adding VirtualBox Guest Additions to VM.
2025-04-29 14:40:36 (19052): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-29 14:40:36 (19052): forwarding host port 54030 to guest port 80
2025-04-29 14:40:37 (19052): Enabling remote desktop for VM.
2025-04-29 14:40:37 (19052): Required extension pack not installed, remote desktop not enabled.
2025-04-29 14:40:37 (19052): Enabling shared directory for VM.
2025-04-29 14:40:37 (19052): Starting VM using VBoxManage interface. (boinc_7558ca90ba9ceea7, slot#0)
2025-04-29 14:40:44 (19052): Successfully started VM. (PID = '16380')
2025-04-29 14:40:44 (19052): Reporting VM Process ID to BOINC.
2025-04-29 14:40:44 (19052): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-29 14:40:44 (19052): Guest Log: CPUID EDX: 0x178bfbff
2025-04-29 14:40:44 (19052): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-29 14:40:44 (19052): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-29 14:40:44 (19052): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-29 14:40:44 (19052): Detected: Web Application Enabled (http://localhost:54030)
2025-04-29 14:40:44 (19052): Preference change detected
2025-04-29 14:40:44 (19052): Setting CPU throttle for VM. (100%)
2025-04-29 14:40:45 (19052): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-29 14:40:46 (19052): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-29 14:40:46 (19052): Guest Log: BIOS: Booting from Hard Disk...
2025-04-29 14:40:49 (19052): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-29 14:40:49 (19052): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-29 14:40:49 (19052): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-29 14:40:54 (19052): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-29 14:40:54 (19052): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-29 14:41:00 (19052): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-29 14:41:00 (19052): Guest Log: 00:00:00.000248 main     Log opened 2025-04-29T14:40:58.930409000Z
2025-04-29 14:41:00 (19052): Guest Log: 00:00:00.000364 main     OS Product: Linux
2025-04-29 14:41:00 (19052): Guest Log: 00:00:00.000399 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-29 14:41:00 (19052): Guest Log: 00:00:00.000430 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-29 14:41:00 (19052): Guest Log: 00:00:00.000461 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-29 14:41:00 (19052): Guest Log: 00:00:00.000462 main     Process ID: 1267
2025-04-29 14:41:00 (19052): Guest Log: 00:00:00.000462 main     Package type: LINUX_64BITS_GENERIC
2025-04-29 14:41:00 (19052): Guest Log: 00:00:00.001307 main     5.2.32 r132073 started. Verbose level = 0
2025-04-29 14:41:00 (19052): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-29 14:41:00 (19052): Guest Log: [INFO] Mounting shared directory
2025-04-29 14:41:00 (19052): Guest Log: [INFO] Checking for init_data.xml
2025-04-29 14:41:08 (19052): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-29 14:41:08 (19052): Guest Log: [INFO] Detected branch: prod
2025-04-29 14:41:08 (19052): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-29 14:41:08 (19052): Guest Log: Copying input files
2025-04-29 14:41:09 (19052): Guest Log: Copied input files into RunAtlas.
2025-04-29 14:41:09 (19052): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-29 14:41:09 (19052): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-29 14:41:09 (19052): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-29 14:41:09 (19052): Guest Log: Further information can be found at the LHC@home message board.
2025-04-29 14:41:10 (19052): Guest Log: 00:00:10.011438 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 504 929 000ns (GuestNow=1 745 930 470 428 806 000 ns GuestLast=1 745 937 658 933 735 000 ns fSetTimeLastLoop=true )
2025-04-29 14:41:17 (19052): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-29 14:41:18 (19052): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-29 14:41:18 (19052): Guest Log: 2.6.3.0 1561 0 30116 145415 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-29 14:41:18 (19052): Guest Log: copied the webapp to /var/www
2025-04-29 14:41:18 (19052): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-29 14:41:18 (19052): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-29 14:41:18 (19052): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-29 14:41:18 (19052): Guest Log:  *** Starting ATLAS job. (PandaID=6620965312 taskID=44270670) ***
2025-04-29 14:50:50 (19052): Guest Log:  *** Job finished ***
2025-04-29 14:50:50 (19052): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:36,071 | INFO     | [data] copytool_out thread has finished
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:36,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:40,301 | INFO     | [data] queue_monitor thread has finished
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:40,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140617443604288)>', '<ExcThread(monitor, started 140617002764032)>']
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:41,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:41,039 | INFO     | [monitor] control thread has ended
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:45,680 | INFO     | all workflow threads have been joined
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:45,680 | INFO     | end of generic workflow (traces error code: 0)
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:45,681 | INFO     | traces error code: 0
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:45,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:45,815 [wrapper] ==== pilot stdout END ====
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:45,821 [wrapper] ==== wrapper stdout RESUME ====
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:45,828 [wrapper] pilotpid: 5887
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:45,834 [wrapper] Pilot exit status: 0
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:49,118 [wrapper] pandaids: 6620965312
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:49,154 [wrapper] cleanup supervisor_pilot  5893 5888
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:49,160 [wrapper] Test setup, not cleaning
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:49,167 [wrapper] apfmon messages muted
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:49,174 [wrapper] ==== wrapper stdout END ====
2025-04-29 14:50:50 (19052): Guest Log: 2025-04-29 12:50:49,180 [wrapper] ==== wrapper stderr END ====
2025-04-29 14:50:50 (19052): Guest Log:  *** Error codes and diagnostics ***
2025-04-29 14:50:50 (19052): Guest Log:     "exeErrorCode": 65,
2025-04-29 14:50:50 (19052): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-04-29 14:50:50 (19052): Guest Log:     "pilotErrorCode": 1305,
2025-04-29 14:50:50 (19052): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-04-29 14:50:50 (19052): Guest Log:  *** Listing of results directory ***
2025-04-29 14:50:50 (19052): Guest Log: total 4044
2025-04-29 14:50:50 (19052): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 29 08:11 pilot3.tar.gz
2025-04-29 14:50:50 (19052): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 29 08:22 runpilot2-wrapper.sh
2025-04-29 14:50:50 (19052): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 29 08:22 queuedata.json
2025-04-29 14:50:50 (19052): Guest Log: -rwxr-xr-x. 1 atlas atlas    9084 Apr 29 12:41 init_data.xml
2025-04-29 14:50:50 (19052): Guest Log: -rwxr-xr-x. 1 atlas atlas  508871 Apr 29 12:41 input.tar.gz
2025-04-29 14:50:50 (19052): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 29 12:41 start_atlas.sh
2025-04-29 14:50:50 (19052): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 29 12:41 EVNT.44270667._000055.pool.root.1 -> /data/./ATLAS.root_0
2025-04-29 14:50:50 (19052): Guest Log: -rw-r--r--. 1 atlas atlas    2479 Apr 29 12:41 pandaJob.out
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas     424 Apr 29 12:41 setup.sh.local
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas  995519 Apr 29 12:43 agis_schedconf.cvmfs.json
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas 1596659 Apr 29 12:43 agis_ddmendpoints.agis.ALL.json
2025-04-29 14:50:50 (19052): Guest Log: drwx------. 4 atlas atlas    4096 Apr 29 12:43 pilot3
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas   46793 Apr 29 12:48 log.44270670._008501.job.log.tgz.1
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas      95 Apr 29 12:50 pilot_heartbeat.json
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas    8001 Apr 29 12:50 heartbeat.json
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 29 12:50 pilotlog.txt
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas  138845 Apr 29 12:50 log.44270670._008501.job.log.1
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas     188 Apr 29 12:50 output.list
2025-04-29 14:50:50 (19052): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 29 12:50 runtime_log
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas  204800 Apr 29 12:50 result.tar.gz
2025-04-29 14:50:50 (19052): Guest Log: -rw-r--r--. 1 atlas atlas   10797 Apr 29 12:50 runtime_log.err
2025-04-29 14:50:50 (19052): Guest Log: -rw-------. 1 atlas atlas     645 Apr 29 12:50 Ay2NDmNPvT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmzYDLDmlF99in.diag
2025-04-29 14:50:50 (19052): Guest Log: Looking for outputfile HITS.44270670._008501.pool.root.1
2025-04-29 14:50:50 (19052): Guest Log: No HITS file was produced
2025-04-29 14:50:50 (19052): Guest Log: Successfully finished the ATLAS job!
2025-04-29 14:50:50 (19052): Guest Log: Copying the results back to the shared directory!
2025-04-29 14:50:50 (19052): Guest Log:  *** Contents of shared directory: ***
2025-04-29 14:50:50 (19052): Guest Log: total 208416
2025-04-29 14:50:50 (19052): Guest Log: -rwxrwxrwx. 1 root root 212666325 Apr 29 12:40 ATLAS.root_0
2025-04-29 14:50:50 (19052): Guest Log: -rwxrwxrwx. 1 root root      9084 Apr 29 12:40 init_data.xml
2025-04-29 14:50:50 (19052): Guest Log: -rwxrwxrwx. 1 root root    508871 Apr 29 12:38 input.tar.gz
2025-04-29 14:50:50 (19052): Guest Log: -rwxrwxrwx. 1 root root    204800 Apr 29 12:50 result.tar.gz
2025-04-29 14:50:50 (19052): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 29 12:38 start_atlas.sh
2025-04-29 14:50:50 (19052): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-29 14:50:50 (19052): VM Completion File Detected.
2025-04-29 14:50:50 (19052): Powering off VM.
2025-04-29 14:50:51 (19052): Successfully stopped VM.
2025-04-29 14:50:51 (19052): Deregistering VM. (boinc_7558ca90ba9ceea7, slot#0)
2025-04-29 14:50:51 (19052): Removing network bandwidth throttle group from VM.
2025-04-29 14:50:51 (19052): Removing VM from VirtualBox.
14:50:57 (19052): called boinc_finish(0)

</stderr_txt>
]]>

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