Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:35:38 (36689): wrapper (7.7.26015): starting
09:35:38 (36689): wrapper: running run_atlas (--nthreads 12)
[2025-04-29 09:35:38] Arguments: --nthreads 12
[2025-04-29 09:35:38] Threads: 12
[2025-04-29 09:35:38] Checking for CVMFS
[2025-04-29 09:35:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 09:36:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 09:36:10] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 09:36:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 09:36:10] 2.11.3.0 1928 21 50504 145403 3 187 3836900 4096001 0 130560 0 97170 99.983 71550 1164 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-29 09:36:10] CVMFS is ok
[2025-04-29 09:36:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-29 09:36:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-29 09:36:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-29 09:36:10] Further information can be found at the LHC@home message board.
[2025-04-29 09:36:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 09:36:10] Checking for apptainer binary...
[2025-04-29 09:36:10] apptainer is not installed, using version from CVMFS
[2025-04-29 09:36:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 09:36:10] hl-hn02
[2025-04-29 09:36:10] apptainer works
[2025-04-29 09:36:10] Set ATHENA_PROC_NUMBER=12
[2025-04-29 09:36:10] Set ATHENA_CORE_NUMBER=12
[2025-04-29 09:36:10] Starting ATLAS job with PandaID=6618577486
[2025-04-29 09:36:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 11:52:25]  *** The last 200 lines of the pilot log: ***
[2025-04-29 11:52:25] 2025-04-29 09:52:09,350 | INFO     | sum of deviations: 66360975362.0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,350 | INFO     | mean x: 1745916273.5
[2025-04-29 11:52:25] 2025-04-29 09:52:09,350 | INFO     | mean y: 2580300.0757575757
[2025-04-29 11:52:25] 2025-04-29 09:52:09,350 | INFO     | -- intersect: -162462818815.77652
[2025-04-29 11:52:25] 2025-04-29 09:52:09,350 | INFO     | intersect: -162462818815.77652
[2025-04-29 11:52:25] 2025-04-29 09:52:09,351 | INFO     | chi2: 4.876913623841009
[2025-04-29 11:52:25] 2025-04-29 09:52:09,351 | INFO     | sum of square deviations: 635130048.0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,352 | INFO     | sum of deviations: 63746708976.000015
[2025-04-29 11:52:25] 2025-04-29 09:52:09,352 | INFO     | mean x: 1745916121.0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,352 | INFO     | mean y: 2575187.102362205
[2025-04-29 11:52:25] 2025-04-29 09:52:09,352 | INFO     | -- intersect: -175231468946.63358
[2025-04-29 11:52:25] 2025-04-29 09:52:09,353 | INFO     | intersect: -175231468946.63358
[2025-04-29 11:52:25] 2025-04-29 09:52:09,353 | INFO     | chi2: 4.873473585471457
[2025-04-29 11:52:25] 2025-04-29 09:52:09,353 | INFO     | current chi2=4.873473585471457 (change=0.0705372010842171 %)
[2025-04-29 11:52:25] 2025-04-29 09:52:09,353 | INFO     | right removable region: 126
[2025-04-29 11:52:25] 2025-04-29 09:52:09,354 | INFO     | sum of square deviations: 635130048.0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,355 | INFO     | sum of deviations: 30462918161.000008
[2025-04-29 11:52:25] 2025-04-29 09:52:09,355 | INFO     | mean x: 1745916426.0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,355 | INFO     | mean y: 2650193.94488189
[2025-04-29 11:52:25] 2025-04-29 09:52:09,355 | INFO     | -- intersect: -83737222244.24847
[2025-04-29 11:52:25] 2025-04-29 09:52:09,355 | INFO     | intersect: -83737222244.24847
[2025-04-29 11:52:25] 2025-04-29 09:52:09,356 | INFO     | chi2: 2.071048992510527
[2025-04-29 11:52:25] 2025-04-29 09:52:09,356 | INFO     | current chi2=2.071048992510527 (change=57.53361342333167 %)
[2025-04-29 11:52:25] 2025-04-29 09:52:09,356 | INFO     | sum of square deviations: 563026370.5
[2025-04-29 11:52:25] 2025-04-29 09:52:09,357 | INFO     | sum of deviations: 2812781248.0000005
[2025-04-29 11:52:25] 2025-04-29 09:52:09,357 | INFO     | mean x: 1745916578.5
[2025-04-29 11:52:25] 2025-04-29 09:52:09,357 | INFO     | mean y: 2708699.2786885244
[2025-04-29 11:52:25] 2025-04-29 09:52:09,358 | INFO     | -- intersect: -8719585086.385336
[2025-04-29 11:52:25] 2025-04-29 09:52:09,358 | INFO     | intersect: -8719585086.385336
[2025-04-29 11:52:25] 2025-04-29 09:52:09,358 | INFO     | chi2: 0.5097265288648163
[2025-04-29 11:52:25] 2025-04-29 09:52:09,358 | INFO     | current chi2=0.5097265288648163 (change=75.38800237424971 %)
[2025-04-29 11:52:25] 2025-04-29 09:52:09,359 | INFO     | sum of square deviations: 496597218.0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,360 | INFO     | sum of deviations: -8726132533.0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,360 | INFO     | mean x: 1745916731.0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,360 | INFO     | mean y: 2734713.205128205
[2025-04-29 11:52:25] 2025-04-29 09:52:09,360 | INFO     | -- intersect: 30681724111.58736
[2025-04-29 11:52:25] 2025-04-29 09:52:09,360 | INFO     | intersect: 30681724111.58736
[2025-04-29 11:52:25] 2025-04-29 09:52:09,361 | INFO     | chi2: 0.04214984972071336
[2025-04-29 11:52:25] 2025-04-29 09:52:09,361 | INFO     | current chi2=0.04214984972071336 (change=91.73088953902734 %)
[2025-04-29 11:52:25] 2025-04-29 09:52:09,361 | INFO     | sum of square deviations: 435610028.0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,362 | INFO     | sum of deviations: -6867982558.000001
[2025-04-29 11:52:25] 2025-04-29 09:52:09,362 | INFO     | mean x: 1745916883.5
[2025-04-29 11:52:25] 2025-04-29 09:52:09,362 | INFO     | mean y: 2730045.4464285714
[2025-04-29 11:52:25] 2025-04-29 09:52:09,362 | INFO     | -- intersect: 27529476292.88525
[2025-04-29 11:52:25] 2025-04-29 09:52:09,363 | INFO     | intersect: 27529476292.88525
[2025-04-29 11:52:25] 2025-04-29 09:52:09,363 | INFO     | chi2: 0.04049651488992564
[2025-04-29 11:52:25] 2025-04-29 09:52:09,363 | INFO     | current chi2=0.04049651488992564 (change=3.922516549270726 %)
[2025-04-29 11:52:25] 2025-04-29 09:52:09,363 | INFO     | left removable region: 40
[2025-04-29 11:52:25] 2025-04-29 09:52:09,363 | INFO     | sum of square deviations: 197203697.5
[2025-04-29 11:52:25] 2025-04-29 09:52:09,364 | INFO     | sum of deviations: 472645659.49999994
[2025-04-29 11:52:25] 2025-04-29 09:52:09,364 | INFO     | mean x: 1745917310.5
[2025-04-29 11:52:25] 2025-04-29 09:52:09,365 | INFO     | mean y: 2707848.104651163
[2025-04-29 11:52:25] 2025-04-29 09:52:09,365 | INFO     | -- intersect: -4181799081.101069
[2025-04-29 11:52:25] 2025-04-29 09:52:09,365 | INFO     | intersect: -4181799081.101069
[2025-04-29 11:52:25] 2025-04-29 09:52:09,365 | INFO     | chi2: 0.0003492255433933363
[2025-04-29 11:52:25] 2025-04-29 09:52:09,365 | INFO     | -- intersect: -4181799081.101069
[2025-04-29 11:52:25] 2025-04-29 09:52:09,365 | INFO     | current memory leak: 2.40 B/s (using 86 data points, chi2=0.00)
[2025-04-29 11:52:25] 2025-04-29 09:52:09,366 | INFO     | ..............................
[2025-04-29 11:52:25] 2025-04-29 09:52:09,366 | INFO     | . Timing measurements:
[2025-04-29 11:52:25] 2025-04-29 09:52:09,366 | INFO     | . get job = 0 s
[2025-04-29 11:52:25] 2025-04-29 09:52:09,366 | INFO     | . initial setup = 2 s
[2025-04-29 11:52:25] 2025-04-29 09:52:09,367 | INFO     | . payload setup = 7 s
[2025-04-29 11:52:25] 2025-04-29 09:52:09,367 | INFO     | . stage-in = 0 s
[2025-04-29 11:52:25] 2025-04-29 09:52:09,367 | INFO     | . payload execution = 8045 s
[2025-04-29 11:52:25] 2025-04-29 09:52:09,367 | INFO     | . stage-out = 0 s
[2025-04-29 11:52:25] 2025-04-29 09:52:09,367 | INFO     | . log creation = 0 s
[2025-04-29 11:52:25] 2025-04-29 09:52:09,367 | INFO     | ..............................
[2025-04-29 11:52:25] 2025-04-29 09:52:09,818 | INFO     | 
[2025-04-29 11:52:25] 2025-04-29 09:52:09,819 | INFO     | job summary report
[2025-04-29 11:52:25] 2025-04-29 09:52:09,819 | INFO     | --------------------------------------------------
[2025-04-29 11:52:25] 2025-04-29 09:52:09,819 | INFO     | PanDA job id: 6618577486
[2025-04-29 11:52:25] 2025-04-29 09:52:09,819 | INFO     | task id: 44292257
[2025-04-29 11:52:25] 2025-04-29 09:52:09,819 | INFO     | errors: (none)
[2025-04-29 11:52:25] 2025-04-29 09:52:09,819 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 11:52:25] 2025-04-29 09:52:09,819 | INFO     | pilot state: finished 
[2025-04-29 11:52:25] 2025-04-29 09:52:09,820 | INFO     | transexitcode: 0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,820 | INFO     | exeerrorcode: 0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,820 | INFO     | exeerrordiag: 
[2025-04-29 11:52:25] 2025-04-29 09:52:09,820 | INFO     | exitcode: 0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,820 | INFO     | exitmsg: OK
[2025-04-29 11:52:25] 2025-04-29 09:52:09,820 | INFO     | cpuconsumptiontime: 82016 s
[2025-04-29 11:52:25] 2025-04-29 09:52:09,820 | INFO     | nevents: 400
[2025-04-29 11:52:25] 2025-04-29 09:52:09,820 | INFO     | neventsw: 0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,821 | INFO     | pid: 57728
[2025-04-29 11:52:25] 2025-04-29 09:52:09,821 | INFO     | pgrp: 57728
[2025-04-29 11:52:25] 2025-04-29 09:52:09,821 | INFO     | corecount: 12
[2025-04-29 11:52:25] 2025-04-29 09:52:09,821 | INFO     | event service: False
[2025-04-29 11:52:25] 2025-04-29 09:52:09,821 | INFO     | sizes: {0: 2393515, 1: 2393714, 6: 2393920, 12: 2393948, 8056: 2421433, 8058: 2430572, 8063: 2430686}
[2025-04-29 11:52:25] 2025-04-29 09:52:09,821 | INFO     | --------------------------------------------------
[2025-04-29 11:52:25] 2025-04-29 09:52:09,821 | INFO     | 
[2025-04-29 11:52:25] 2025-04-29 09:52:09,822 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-04-29 11:52:25] 2025-04-29 09:52:09,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,846 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,846 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,846 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,847 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,847 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,847 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,847 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,847 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,847 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,848 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 11:52:25] 2025-04-29 09:52:09,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 11:52:25] 2025-04-29 09:52:09,849 | INFO     | job 6618577486 has completed (purged errors)
[2025-04-29 11:52:25] 2025-04-29 09:52:09,849 | INFO     | overall cleanup function is called
[2025-04-29 11:52:25] 2025-04-29 09:52:10,858 | INFO     | --- collectZombieJob: --- 10, [57728]
[2025-04-29 11:52:25] 2025-04-29 09:52:10,859 | INFO     | zombie collector waiting for pid 57728
[2025-04-29 11:52:25] 2025-04-29 09:52:10,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 11:52:25] 2025-04-29 09:52:10,859 | INFO     | collected zombie processes
[2025-04-29 11:52:25] 2025-04-29 09:52:10,859 | INFO     | will attempt to kill all subprocesses of pid=57728
[2025-04-29 11:52:25] 2025-04-29 09:52:11,002 | INFO     | process IDs to be killed: [57728] (in reverse order)
[2025-04-29 11:52:25] 2025-04-29 09:52:11,056 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 11:52:25] 2025-04-29 09:52:11,057 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 11:52:25] 2025-04-29 09:52:11,060 | INFO     | did not find any defunct processes belonging to 57728
[2025-04-29 11:52:25] 2025-04-29 09:52:11,064 | INFO     | did not find any defunct processes belonging to 57728
[2025-04-29 11:52:25] 2025-04-29 09:52:11,064 | INFO     | ready for new job
[2025-04-29 11:52:25] 2025-04-29 09:52:11,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 11:52:25] 2025-04-29 09:52:11,066 | INFO     | **************************************
[2025-04-29 11:52:25] 2025-04-29 09:52:11,066 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 11:52:25] 2025-04-29 09:52:11,066 | INFO     | **************************************
[2025-04-29 11:52:25] 2025-04-29 09:52:11,066 | INFO     | 
[2025-04-29 11:52:25] 2025-04-29 09:52:11,067 | INFO     | architecture information:
[2025-04-29 11:52:25] 2025-04-29 09:52:11,067 | INFO     | executing command: cat /etc/os-release
[2025-04-29 11:52:25] 2025-04-29 09:52:11,082 | INFO     | cat /etc/os-release:
[2025-04-29 11:52:25] NAME="CentOS Linux"
[2025-04-29 11:52:25] VERSION="7 (Core)"
[2025-04-29 11:52:25] ID="centos"
[2025-04-29 11:52:25] ID_LIKE="rhel fedora"
[2025-04-29 11:52:25] VERSION_ID="7"
[2025-04-29 11:52:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 11:52:25] ANSI_COLOR="0;31"
[2025-04-29 11:52:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 11:52:25] HOME_URL="https://www.centos.org/"
[2025-04-29 11:52:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 11:52:25] 
[2025-04-29 11:52:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 11:52:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 11:52:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 11:52:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 11:52:25] 
[2025-04-29 11:52:25] 2025-04-29 09:52:11,082 | INFO     | **************************************
[2025-04-29 11:52:25] 2025-04-29 09:52:11,585 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-04-29 11:52:25] 2025-04-29 09:52:11,608 | INFO     | sufficient remaining disk space (216749047808 B)
[2025-04-29 11:52:25] 2025-04-29 09:52:11,608 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 11:52:25] 2025-04-29 09:52:11,608 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 11:52:25] 2025-04-29 09:52:11,608 | INFO     | update_server=False
[2025-04-29 11:52:25] 2025-04-29 09:52:11,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 11:52:25] 2025-04-29 09:52:11,609 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-29 11:52:25] 2025-04-29 09:52:11,609 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 11:52:25] 2025-04-29 09:52:11,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 11:52:25] 2025-04-29 09:52:11,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 11:52:25] 2025-04-29 09:52:11,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 11:52:25] 2025-04-29 09:52:11,756 | INFO     | aborting loop
[2025-04-29 11:52:25] 2025-04-29 09:52:12,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 11:52:25] 2025-04-29 09:52:12,060 | INFO     | all data control threads have been joined
[2025-04-29 11:52:25] 2025-04-29 09:52:12,181 | INFO     | all job control threads have been joined
[2025-04-29 11:52:25] 2025-04-29 09:52:12,596 | INFO     | all payload control threads have been joined
[2025-04-29 11:52:25] 2025-04-29 09:52:12,614 | INFO     | [job] retrieve thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:12,761 | INFO     | [job] job monitor thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:12,790 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:12,958 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:13,066 | INFO     | [data] control thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:13,187 | INFO     | [job] control thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:13,262 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:13,558 | INFO     | [payload] validate_post thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:13,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:13,602 | INFO     | [payload] control thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:13,709 | INFO     | [data] copytool_in thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:13,964 | INFO     | [job] validate thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:14,009 | INFO     | [payload] failed_post thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:14,016 | INFO     | [data] copytool_out thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:14,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 11:52:25] 2025-04-29 09:52:14,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 11:52:25] 2025-04-29 09:52:15,549 | INFO     | [job] queue monitor thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:18,965 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 11:52:25] 2025-04-29 09:52:19,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823312791360)>', '<ExcThread(monitor, started 139822760965888)>']
[2025-04-29 11:52:25] 2025-04-29 09:52:20,655 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 11:52:25] 2025-04-29 09:52:20,656 | INFO     | [monitor] control thread has ended
[2025-04-29 11:52:25] 2025-04-29 09:52:24,856 | INFO     | all workflow threads have been joined
[2025-04-29 11:52:25] 2025-04-29 09:52:24,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 11:52:25] 2025-04-29 09:52:24,856 | INFO     | traces error code: 0
[2025-04-29 11:52:25] 2025-04-29 09:52:24,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 11:52:25] 2025-04-29 09:52:25,026 [wrapper] ==== pilot stdout END ====
[2025-04-29 11:52:25] 2025-04-29 09:52:25,029 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 11:52:25] 2025-04-29 09:52:25,033 [wrapper] pilotpid: 44551
[2025-04-29 11:52:25] 2025-04-29 09:52:25,036 [wrapper] Pilot exit status: 0
[2025-04-29 11:52:25] 2025-04-29 09:52:25,048 [wrapper] pandaids: 6618577486
[2025-04-29 11:52:25] 2025-04-29 09:52:25,086 [wrapper] cleanup supervisor_pilot   95580 44553
[2025-04-29 11:52:25] 2025-04-29 09:52:25,090 [wrapper] Test setup, not cleaning
[2025-04-29 11:52:25] 2025-04-29 09:52:25,093 [wrapper] apfmon messages muted
[2025-04-29 11:52:25] 2025-04-29 09:52:25,097 [wrapper] ==== wrapper stdout END ====
[2025-04-29 11:52:25] 2025-04-29 09:52:25,100 [wrapper] ==== wrapper stderr END ====
[2025-04-29 11:52:25]  *** Error codes and diagnostics ***
[2025-04-29 11:52:25]     "exeErrorCode": 0,
[2025-04-29 11:52:25]     "exeErrorDiag": "",
[2025-04-29 11:52:25]     "pilotErrorCode": 0,
[2025-04-29 11:52:25]     "pilotErrorDiag": "",
[2025-04-29 11:52:25]  *** Listing of results directory ***
[2025-04-29 11:52:25] insgesamt 222236
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc    495897 28. Apr 09:57 pilot3.tar.gz
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc      5111 28. Apr 10:00 queuedata.json
[2025-04-29 11:52:25] -rwx------ 1 boinc boinc     37140 28. Apr 10:01 runpilot2-wrapper.sh
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc       100 29. Apr 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 11:52:25] -rwxr-xr-x 1 boinc boinc      7986 29. Apr 09:35 run_atlas
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc       105 29. Apr 09:35 job.xml
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc      6422 29. Apr 09:35 init_data.xml
[2025-04-29 11:52:25] -rw-r--r-- 2 boinc boinc  27626178 29. Apr 09:35 EVNT.44292255._003198.pool.root.1
[2025-04-29 11:52:25] -rw-r--r-- 2 boinc boinc     17569 29. Apr 09:35 start_atlas.sh
[2025-04-29 11:52:25] drwxrwx--x 2 boinc boinc      4096 29. Apr 09:35 shared
[2025-04-29 11:52:25] -rw-r--r-- 2 boinc boinc    508885 29. Apr 09:35 input.tar.gz
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc         0 29. Apr 09:35 boinc_lockfile
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc      2549 29. Apr 09:36 pandaJob.out
[2025-04-29 11:52:25] -rw------- 1 boinc boinc       424 29. Apr 09:36 setup.sh.local
[2025-04-29 11:52:25] -rw------- 1 boinc boinc    995552 29. Apr 09:37 agis_schedconf.cvmfs.json
[2025-04-29 11:52:25] -rw------- 1 boinc boinc   1596659 29. Apr 09:37 agis_ddmendpoints.agis.ALL.json
[2025-04-29 11:52:25] drwx------ 4 boinc boinc      4096 29. Apr 09:37 pilot3
[2025-04-29 11:52:25] -rw------- 1 boinc boinc 193840943 29. Apr 11:51 HITS.44292257._030163.pool.root.1
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc       530 29. Apr 11:51 boinc_task_state.xml
[2025-04-29 11:52:25] -rw------- 1 boinc boinc        95 29. Apr 11:51 pilot_heartbeat.json
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc      8192 29. Apr 11:51 boinc_mmap_file
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc        27 29. Apr 11:51 wrapper_checkpoint.txt
[2025-04-29 11:52:25] -rw------- 1 boinc boinc      1013 29. Apr 11:51 memory_monitor_summary.json
[2025-04-29 11:52:25] -rw------- 1 boinc boinc    381990 29. Apr 11:52 log.44292257._030163.job.log.tgz.1
[2025-04-29 11:52:25] -rw------- 1 boinc boinc      7627 29. Apr 11:52 heartbeat.json
[2025-04-29 11:52:25] -rw------- 1 boinc boinc      4484 29. Apr 11:52 pilotlog.txt
[2025-04-29 11:52:25] -rw------- 1 boinc boinc    747276 29. Apr 11:52 log.44292257._030163.job.log.1
[2025-04-29 11:52:25] -rw------- 1 boinc boinc       357 29. Apr 11:52 output.list
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc       620 29. Apr 11:52 runtime_log
[2025-04-29 11:52:25] -rw------- 1 boinc boinc   1146880 29. Apr 11:52 result.tar.gz
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc     11124 29. Apr 11:52 runtime_log.err
[2025-04-29 11:52:25] -rw------- 1 boinc boinc       646 29. Apr 11:52 P4cKDmGcYT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmAQuLDmY7nHQm.diag
[2025-04-29 11:52:25] -rw-r--r-- 1 boinc boinc     20801 29. Apr 11:52 stderr.txt
[2025-04-29 11:52:25] HITS file was successfully produced:
[2025-04-29 11:52:25] -rw------- 1 boinc boinc 193840943 29. Apr 11:51 shared/HITS.pool.root.1
[2025-04-29 11:52:25]  *** Contents of shared directory: ***
[2025-04-29 11:52:25] insgesamt 217924
[2025-04-29 11:52:25] -rw-r--r-- 2 boinc boinc  27626178 29. Apr 09:35 ATLAS.root_0
[2025-04-29 11:52:25] -rw-r--r-- 2 boinc boinc     17569 29. Apr 09:35 start_atlas.sh
[2025-04-29 11:52:25] -rw-r--r-- 2 boinc boinc    508885 29. Apr 09:35 input.tar.gz
[2025-04-29 11:52:25] -rw------- 1 boinc boinc 193840943 29. Apr 11:51 HITS.pool.root.1
[2025-04-29 11:52:25] -rw------- 1 boinc boinc   1146880 29. Apr 11:52 result.tar.gz
11:52:26 (36689): run_atlas exited; CPU time 82137.778225
11:52:26 (36689): called boinc_finish(0)

</stderr_txt>
]]>

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