Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-29 05:31:05 (1044624): Detected: vboxwrapper 26206
2025-04-29 05:31:05 (1044624): Detected: BOINC client v8.2.1
2025-04-29 05:31:05 (1044624): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-04-29 05:31:05 (1044624): Successfully copied 'init_data.xml' to the shared directory.
2025-04-29 05:31:06 (1044624): Create VM. (boinc_e2dae4ad4aa452ae, slot#3)
2025-04-29 05:31:06 (1044624): Setting Memory Size for VM. (4800MB)
2025-04-29 05:31:06 (1044624): Setting CPU Count for VM. (8)
2025-04-29 05:31:06 (1044624): Setting Chipset Options for VM.
2025-04-29 05:31:07 (1044624): Setting Graphics Controller Options for VM.
2025-04-29 05:31:07 (1044624): Setting Boot Options for VM.
2025-04-29 05:31:07 (1044624): Setting Network Configuration for NAT.
2025-04-29 05:31:08 (1044624): Enabling VM Network Access.
2025-04-29 05:31:08 (1044624): Disabling USB Support for VM.
2025-04-29 05:31:08 (1044624): Disabling COM Port Support for VM.
2025-04-29 05:31:08 (1044624): Disabling LPT Port Support for VM.
2025-04-29 05:31:08 (1044624): Disabling Audio Support for VM.
2025-04-29 05:31:08 (1044624): Disabling Clipboard Support for VM.
2025-04-29 05:31:09 (1044624): Disabling Drag and Drop Support for VM.
2025-04-29 05:31:09 (1044624): Adding storage controller(s) to VM.
2025-04-29 05:31:09 (1044624): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-29 05:31:11 (1044624): Adding VirtualBox Guest Additions to VM.
2025-04-29 05:31:11 (1044624): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-29 05:31:12 (1044624): forwarding host port 46093 to guest port 80
2025-04-29 05:31:12 (1044624): Enabling remote desktop for VM.
2025-04-29 05:31:12 (1044624): Required extension pack not installed, remote desktop not enabled.
2025-04-29 05:31:12 (1044624): Enabling shared directory for VM.
2025-04-29 05:31:12 (1044624): Starting VM using VBoxManage interface. (boinc_e2dae4ad4aa452ae, slot#3)
2025-04-29 05:31:14 (1044624): Successfully started VM. (PID = '1045256')
2025-04-29 05:31:14 (1044624): Reporting VM Process ID to BOINC.
2025-04-29 05:31:14 (1044624): Guest Log: BIOS: VirtualBox 7.1.8
2025-04-29 05:31:14 (1044624): Guest Log: CPUID EDX: 0x178bfbff
2025-04-29 05:31:14 (1044624): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-29 05:31:14 (1044624): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-29 05:31:14 (1044624): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-29 05:31:14 (1044624): Detected: Web Application Enabled (http://localhost:46093)
2025-04-29 05:31:14 (1044624): Preference change detected
2025-04-29 05:31:14 (1044624): Setting CPU throttle for VM. (100%)
2025-04-29 05:31:14 (1044624): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-29 05:31:16 (1044624): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-29 05:31:16 (1044624): Guest Log: BIOS: Booting from Hard Disk...
2025-04-29 05:31:19 (1044624): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-29 05:31:19 (1044624): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-29 05:31:19 (1044624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-29 05:31:34 (1044624): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-29 05:31:34 (1044624): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-29 05:31:51 (1044624): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-29 05:31:51 (1044624): Guest Log: 00:00:00.000234 main     Log opened 2025-04-29T03:31:49.295404000Z
2025-04-29 05:31:51 (1044624): Guest Log: 00:00:00.000356 main     OS Product: Linux
2025-04-29 05:31:51 (1044624): Guest Log: 00:00:00.000387 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-29 05:31:51 (1044624): Guest Log: 00:00:00.000411 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-29 05:31:51 (1044624): Guest Log: 00:00:00.000435 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-29 05:31:51 (1044624): Guest Log: 00:00:00.000436 main     Process ID: 1379
2025-04-29 05:31:51 (1044624): Guest Log: 00:00:00.000437 main     Package type: LINUX_64BITS_GENERIC
2025-04-29 05:31:51 (1044624): Guest Log: 00:00:00.009235 main     5.2.32 r132073 started. Verbose level = 0
2025-04-29 05:31:52 (1044624): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-29 05:31:52 (1044624): Guest Log: [INFO] Mounting shared directory
2025-04-29 05:31:52 (1044624): Guest Log: [INFO] Checking for init_data.xml
2025-04-29 05:32:05 (1044624): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-29 05:32:05 (1044624): Guest Log: [INFO] Detected branch: prod
2025-04-29 05:32:06 (1044624): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-29 05:32:06 (1044624): Guest Log: Copying input files
2025-04-29 05:32:06 (1044624): Guest Log: Copied input files into RunAtlas.
2025-04-29 05:32:06 (1044624): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-29 05:32:06 (1044624): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-29 05:32:06 (1044624): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-29 05:32:06 (1044624): Guest Log: Further information can be found at the LHC@home message board.
2025-04-29 05:32:16 (1044624): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-29 05:32:16 (1044624): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-29 05:32:16 (1044624): Guest Log: 2.6.3.0 1664 0 32200 145397 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-29 05:32:18 (1044624): Guest Log: copied the webapp to /var/www
2025-04-29 05:32:18 (1044624): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-29 05:32:18 (1044624): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-29 05:32:19 (1044624): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-29 05:32:19 (1044624): Guest Log:  *** Starting ATLAS job. (PandaID=6618755712 taskID=44292257) ***
2025-04-29 07:10:14 (1044624): Status Report: Elapsed Time: '6000.000000'
2025-04-29 07:10:14 (1044624): Status Report: CPU Time: '32442.180000'
2025-04-29 08:49:15 (1044624): Status Report: Elapsed Time: '12000.000000'
2025-04-29 08:49:15 (1044624): Status Report: CPU Time: '72792.600000'
2025-04-29 09:10:14 (1044624): Guest Log:  *** Job finished ***
2025-04-29 09:10:14 (1044624): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:09:58,811 | INFO     | [data] queue_monitor thread has finished
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:04,588 | INFO     | job.realtimelogging is not enabled
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:05,594 | INFO     | [payload] run_realtimelog thread has finished
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:07,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715630507840)>', '<ExcThread(monitor, started 140715048814336)>']
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:08,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:08,460 | INFO     | [monitor] control thread has ended
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,657 | INFO     | all workflow threads have been joined
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,657 | INFO     | end of generic workflow (traces error code: 0)
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,657 | INFO     | traces error code: 0
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,739 [wrapper] ==== pilot stdout END ====
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,744 [wrapper] ==== wrapper stdout RESUME ====
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,749 [wrapper] pilotpid: 6046
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,755 [wrapper] Pilot exit status: 0
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,906 [wrapper] pandaids: 6618755712
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,942 [wrapper] cleanup supervisor_pilot 14066 6047
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,951 [wrapper] Test setup, not cleaning
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,956 [wrapper] apfmon messages muted
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,961 [wrapper] ==== wrapper stdout END ====
2025-04-29 09:10:14 (1044624): Guest Log: 2025-04-29 07:10:12,966 [wrapper] ==== wrapper stderr END ====
2025-04-29 09:10:14 (1044624): Guest Log:  *** Error codes and diagnostics ***
2025-04-29 09:10:14 (1044624): Guest Log:     "exeErrorCode": 0,
2025-04-29 09:10:14 (1044624): Guest Log:     "exeErrorDiag": "",
2025-04-29 09:10:14 (1044624): Guest Log:     "pilotErrorCode": 0,
2025-04-29 09:10:14 (1044624): Guest Log:     "pilotErrorDiag": "",
2025-04-29 09:10:14 (1044624): Guest Log:  *** Listing of results directory ***
2025-04-29 09:10:14 (1044624): Guest Log: total 201992
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 28 11:09 pilot3.tar.gz
2025-04-29 09:10:14 (1044624): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 28 11:16 runpilot2-wrapper.sh
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 28 11:16 queuedata.json
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 atlas atlas    508875 Apr 29 03:32 input.tar.gz
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 29 03:32 start_atlas.sh
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 atlas atlas      9072 Apr 29 03:32 init_data.xml
2025-04-29 09:10:14 (1044624): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 29 03:32 EVNT.44292255._003778.pool.root.1 -> /data/./ATLAS.root_0
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Apr 29 03:32 pandaJob.out
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas       424 Apr 29 03:32 setup.sh.local
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas    995438 Apr 29 03:35 agis_schedconf.cvmfs.json
2025-04-29 09:10:14 (1044624): Guest Log: drwx------. 4 atlas atlas      4096 Apr 29 03:35 pilot3
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas        95 Apr 29 07:09 pilot_heartbeat.json
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas 200253741 Apr 29 07:09 HITS.44292257._031961.pool.root.1
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas      1034 Apr 29 07:09 memory_monitor_summary.json
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 29 07:09 agis_ddmendpoints.agis.ALL.json
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas    356991 Apr 29 07:09 log.44292257._031961.job.log.tgz.1
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas      7696 Apr 29 07:09 heartbeat.json
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas      4608 Apr 29 07:10 pilotlog.txt
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas   1042354 Apr 29 07:10 log.44292257._031961.job.log.1
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas       357 Apr 29 07:10 output.list
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 29 07:10 runtime_log
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas   1423360 Apr 29 07:10 result.tar.gz
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 atlas atlas     10971 Apr 29 07:10 runtime_log.err
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas       672 Apr 29 07:10 B4HLDm5dbT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmemCLDmnAfzwm.diag
2025-04-29 09:10:14 (1044624): Guest Log: Looking for outputfile HITS.44292257._031961.pool.root.1
2025-04-29 09:10:14 (1044624): Guest Log: HITS file was successfully produced
2025-04-29 09:10:14 (1044624): Guest Log: -rw-------. 1 atlas atlas 200253741 Apr 29 07:09 /home/atlas/RunAtlas/HITS.44292257._031961.pool.root.1
2025-04-29 09:10:14 (1044624): Guest Log: Successfully finished the ATLAS job!
2025-04-29 09:10:14 (1044624): Guest Log: Copying the results back to the shared directory!
2025-04-29 09:10:14 (1044624): Guest Log:  *** Contents of shared directory: ***
2025-04-29 09:10:14 (1044624): Guest Log: total 29188
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 root root 27916498 Apr 29 03:31 ATLAS.root_0
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 root root     9072 Apr 29 03:31 init_data.xml
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 root root   508875 Apr 29 03:31 input.tar.gz
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 root root  1423360 Apr 29 07:10 result.tar.gz
2025-04-29 09:10:14 (1044624): Guest Log: -rw-r--r--. 1 root root    17569 Apr 29 03:31 start_atlas.sh
2025-04-29 09:10:14 (1044624): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-29 09:10:15 (1044624): VM Completion File Detected.
2025-04-29 09:10:15 (1044624): Powering off VM.
2025-04-29 09:10:15 (1044624): Successfully stopped VM.
2025-04-29 09:10:15 (1044624): Deregistering VM. (boinc_e2dae4ad4aa452ae, slot#3)
2025-04-29 09:10:15 (1044624): Removing network bandwidth throttle group from VM.
2025-04-29 09:10:15 (1044624): Removing VM from VirtualBox.
09:10:20 (1044624): called boinc_finish(0)

</stderr_txt>
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