Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:19:00 (83267): wrapper (7.7.26015): starting
16:19:00 (83267): wrapper: running run_atlas (--nthreads 6)
[2025-04-29 16:19:00] Arguments: --nthreads 6
[2025-04-29 16:19:00] Threads: 6
[2025-04-29 16:19:00] Checking for CVMFS
[2025-04-29 16:19:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 16:19:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 16:19:00] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 16:19:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 16:19:01] 2.11.5.0 4006773 4957 76380 145403 2 56 32558338 52428801 1858 130560 0 12324819 99.997 1414020 106 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-29 16:19:01] CVMFS is ok
[2025-04-29 16:19:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 16:19:01] Checking for apptainer binary...
[2025-04-29 16:19:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-29 16:19:01] Running /usr/bin/apptainer --version
[2025-04-29 16:19:01] apptainer version 1.3.5-1.el9
[2025-04-29 16:19:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 16:19:01] testio008
[2025-04-29 16:19:01] apptainer works
[2025-04-29 16:19:01] Set ATHENA_PROC_NUMBER=6
[2025-04-29 16:19:01] Set ATHENA_CORE_NUMBER=6
[2025-04-29 16:19:01] Starting ATLAS job with PandaID=6619661549
[2025-04-29 16:19:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 17:38:19]  *** The last 200 lines of the pilot log: ***
[2025-04-29 17:38:19] 2025-04-29 08:37:26,749 | INFO     | monitor loop #359: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:26,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:29,025 | INFO     | job 6619661549 has state=finished
[2025-04-29 17:38:19] 2025-04-29 08:37:29,025 | INFO     | preparing for final server update for job 6619661549 in state='finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:29,025 | INFO     | this job has now completed (state=finished)
[2025-04-29 17:38:19] 2025-04-29 08:37:29,025 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-29 17:38:19] 2025-04-29 08:37:29,025 | INFO     | log transfer has been attempted: DONE
[2025-04-29 17:38:19] 2025-04-29 08:37:29,025 | INFO     | job 6619661549 has finished - writing final server update
[2025-04-29 17:38:19] 2025-04-29 08:37:29,025 | INFO     | total number of processed events: 400 (read)
[2025-04-29 17:38:19] 2025-04-29 08:37:29,029 | INFO     | executing command: lscpu
[2025-04-29 17:38:19] 2025-04-29 08:37:29,038 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-29 17:38:19] 2025-04-29 08:37:29,252 | INFO     | monitor loop #360: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:29,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:31,755 | INFO     | monitor loop #361: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:31,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:34,258 | INFO     | monitor loop #362: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:34,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:36,761 | INFO     | monitor loop #363: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:36,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:39,264 | INFO     | monitor loop #364: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:39,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:41,767 | INFO     | monitor loop #365: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:41,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:43,095 | INFO     | 4719s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-29 17:38:19] 2025-04-29 08:37:44,270 | INFO     | monitor loop #366: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:44,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:46,773 | INFO     | monitor loop #367: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:46,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:48,185 | INFO     | PID=86976 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-29 17:38:19] 2025-04-29 08:37:48,186 | INFO     | .. there are 3 such processes running
[2025-04-29 17:38:19] 2025-04-29 08:37:49,275 | INFO     | monitor loop #368: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:49,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:51,778 | INFO     | monitor loop #369: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:51,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:54,281 | INFO     | monitor loop #370: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:54,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:56,784 | INFO     | monitor loop #371: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:56,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:37:59,286 | INFO     | monitor loop #372: job 0:6619661549 is in state 'finished'
[2025-04-29 17:38:19] 2025-04-29 08:37:59,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 17:38:19] 2025-04-29 08:38:00,263 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-29 17:38:19] 2025-04-29 08:38:00,263 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6619661549/memory_monitor_summary.json (trf name=prmon)
[2025-04-29 17:38:19] 2025-04-29 08:38:00,264 | INFO     | extracted standard info from prmon json
[2025-04-29 17:38:19] 2025-04-29 08:38:00,264 | INFO     | extracted standard memory fields from prmon json
[2025-04-29 17:38:19] 2025-04-29 08:38:00,264 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-29 17:38:19] 2025-04-29 08:38:00,264 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-29 17:38:19] 2025-04-29 08:38:00,264 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-29 17:38:19] 2025-04-29 08:38:00,265 | INFO     | fitting pss+swap vs Time
[2025-04-29 17:38:19] 2025-04-29 08:38:00,265 | INFO     | sum of square deviations: 106336877.5
[2025-04-29 17:38:19] 2025-04-29 08:38:00,265 | INFO     | sum of deviations: 11202713287.499998
[2025-04-29 17:38:19] 2025-04-29 08:38:00,265 | INFO     | mean x: 1745913575.5
[2025-04-29 17:38:19] 2025-04-29 08:38:00,265 | INFO     | mean y: 2534460.9
[2025-04-29 17:38:19] 2025-04-29 08:38:00,265 | INFO     | -- intersect: -183931484206.1469
[2025-04-29 17:38:19] 2025-04-29 08:38:00,265 | INFO     | intersect: -183931484206.1469
[2025-04-29 17:38:19] 2025-04-29 08:38:00,265 | INFO     | chi2: 2.2635390318889232
[2025-04-29 17:38:19] 2025-04-29 08:38:00,265 | INFO     | -- intersect: -183931484206.1469
[2025-04-29 17:38:19] 2025-04-29 08:38:00,265 | INFO     | current memory leak: 105.35 B/s (using 70 data points, chi2=2.26)
[2025-04-29 17:38:19] 2025-04-29 08:38:00,266 | INFO     | ..............................
[2025-04-29 17:38:19] 2025-04-29 08:38:00,266 | INFO     | . Timing measurements:
[2025-04-29 17:38:19] 2025-04-29 08:38:00,266 | INFO     | . get job = 0 s
[2025-04-29 17:38:19] 2025-04-29 08:38:00,266 | INFO     | . initial setup = 5 s
[2025-04-29 17:38:19] 2025-04-29 08:38:00,266 | INFO     | . payload setup = 2 s
[2025-04-29 17:38:19] 2025-04-29 08:38:00,266 | INFO     | . stage-in = 0 s
[2025-04-29 17:38:19] 2025-04-29 08:38:00,266 | INFO     | . payload execution = 4677 s
[2025-04-29 17:38:19] 2025-04-29 08:38:00,266 | INFO     | . stage-out = 0 s
[2025-04-29 17:38:19] 2025-04-29 08:38:00,266 | INFO     | . log creation = 0 s
[2025-04-29 17:38:19] 2025-04-29 08:38:00,266 | INFO     | ..............................
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | 
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | job summary report
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | --------------------------------------------------
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | PanDA job id: 6619661549
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | task id: 44292257
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | errors: (none)
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | pilot state: finished 
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | transexitcode: 0
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | exeerrorcode: 0
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | exeerrordiag: 
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | exitcode: 0
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | exitmsg: OK
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | cpuconsumptiontime: 22309 s
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | nevents: 400
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | neventsw: 0
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | pid: 93531
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | pgrp: 93531
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | corecount: 6
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | event service: False
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | sizes: {0: 2392904, 1: 2393760, 2: 2393966, 11: 2393994, 4682: 2420093, 4683: 2420092, 4684: 2429273, 4718: 2429387}
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | --------------------------------------------------
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | 
[2025-04-29 17:38:19] 2025-04-29 08:38:00,291 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | job 6619661549 has completed (purged errors)
[2025-04-29 17:38:19] 2025-04-29 08:38:00,298 | INFO     | overall cleanup function is called
[2025-04-29 17:38:19] 2025-04-29 08:38:01,303 | INFO     | --- collectZombieJob: --- 10, [93531]
[2025-04-29 17:38:19] 2025-04-29 08:38:01,303 | INFO     | zombie collector waiting for pid 93531
[2025-04-29 17:38:19] 2025-04-29 08:38:01,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 17:38:19] 2025-04-29 08:38:01,303 | INFO     | collected zombie processes
[2025-04-29 17:38:19] 2025-04-29 08:38:01,303 | INFO     | will attempt to kill all subprocesses of pid=93531
[2025-04-29 17:38:19] 2025-04-29 08:38:01,345 | INFO     | process IDs to be killed: [93531] (in reverse order)
[2025-04-29 17:38:19] 2025-04-29 08:38:01,362 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 17:38:19] 2025-04-29 08:38:01,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 17:38:19] 2025-04-29 08:38:01,363 | INFO     | did not find any defunct processes belonging to 93531
[2025-04-29 17:38:19] 2025-04-29 08:38:01,364 | INFO     | did not find any defunct processes belonging to 93531
[2025-04-29 17:38:19] 2025-04-29 08:38:01,364 | INFO     | ready for new job
[2025-04-29 17:38:19] 2025-04-29 08:38:01,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 17:38:19] 2025-04-29 08:38:01,365 | INFO     | **************************************
[2025-04-29 17:38:19] 2025-04-29 08:38:01,365 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 17:38:19] 2025-04-29 08:38:01,365 | INFO     | **************************************
[2025-04-29 17:38:19] 2025-04-29 08:38:01,365 | INFO     | 
[2025-04-29 17:38:19] 2025-04-29 08:38:01,366 | INFO     | architecture information:
[2025-04-29 17:38:19] 2025-04-29 08:38:01,366 | INFO     | executing command: cat /etc/os-release
[2025-04-29 17:38:19] 2025-04-29 08:38:01,371 | INFO     | cat /etc/os-release:
[2025-04-29 17:38:19] NAME="CentOS Linux"
[2025-04-29 17:38:19] VERSION="7 (Core)"
[2025-04-29 17:38:19] ID="centos"
[2025-04-29 17:38:19] ID_LIKE="rhel fedora"
[2025-04-29 17:38:19] VERSION_ID="7"
[2025-04-29 17:38:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 17:38:19] ANSI_COLOR="0;31"
[2025-04-29 17:38:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 17:38:19] HOME_URL="https://www.centos.org/"
[2025-04-29 17:38:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 17:38:19] 
[2025-04-29 17:38:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 17:38:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 17:38:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 17:38:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 17:38:19] 
[2025-04-29 17:38:19] 2025-04-29 08:38:01,371 | INFO     | **************************************
[2025-04-29 17:38:19] 2025-04-29 08:38:01,872 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-04-29 17:38:19] 2025-04-29 08:38:01,878 | INFO     | sufficient remaining disk space (282312310784 B)
[2025-04-29 17:38:19] 2025-04-29 08:38:01,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 17:38:19] 2025-04-29 08:38:01,878 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 17:38:19] 2025-04-29 08:38:01,878 | INFO     | update_server=False
[2025-04-29 17:38:19] 2025-04-29 08:38:01,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 17:38:19] 2025-04-29 08:38:01,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 17:38:19] 2025-04-29 08:38:01,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 17:38:19] 2025-04-29 08:38:02,206 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 17:38:19] 2025-04-29 08:38:02,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 17:38:19] 2025-04-29 08:38:02,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 17:38:19] 2025-04-29 08:38:02,299 | INFO     | all job control threads have been joined
[2025-04-29 17:38:19] 2025-04-29 08:38:02,714 | INFO     | all payload control threads have been joined
[2025-04-29 17:38:19] 2025-04-29 08:38:02,748 | INFO     | all data control threads have been joined
[2025-04-29 17:38:19] 2025-04-29 08:38:02,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 17:38:19] 2025-04-29 08:38:02,795 | INFO     | aborting loop
[2025-04-29 17:38:19] 2025-04-29 08:38:02,883 | INFO     | [job] retrieve thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:02,883 | INFO     | [job] queue monitor thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:02,946 | INFO     | [payload] failed_post thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:03,253 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:03,304 | INFO     | [job] control thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:03,526 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:03,561 | INFO     | [job] validate thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:03,612 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:03,720 | INFO     | [payload] control thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:03,753 | INFO     | [data] control thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:03,772 | INFO     | [data] copytool_in thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:03,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 17:38:19] 2025-04-29 08:38:03,800 | INFO     | [job] job monitor thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:03,884 | INFO     | [data] copytool_out thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:04,180 | INFO     | [payload] validate_post thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:07,779 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:12,278 | INFO     | job.realtimelogging is not enabled
[2025-04-29 17:38:19] 2025-04-29 08:38:13,283 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 17:38:19] 2025-04-29 08:38:14,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725496670016)>', '<ExcThread(monitor, started 139724849133312)>']
[2025-04-29 17:38:19] 2025-04-29 08:38:14,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 17:38:19] 2025-04-29 08:38:14,262 | INFO     | [monitor] control thread has ended
[2025-04-29 17:38:19] 2025-04-29 08:38:19,272 | INFO     | all workflow threads have been joined
[2025-04-29 17:38:19] 2025-04-29 08:38:19,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 17:38:19] 2025-04-29 08:38:19,272 | INFO     | traces error code: 0
[2025-04-29 17:38:19] 2025-04-29 08:38:19,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 17:38:19] 2025-04-29 08:38:19,337 [wrapper] ==== pilot stdout END ====
[2025-04-29 17:38:19] 2025-04-29 08:38:19,339 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 17:38:19] 2025-04-29 08:38:19,340 [wrapper] pilotpid: 86976
[2025-04-29 17:38:19] 2025-04-29 08:38:19,341 [wrapper] Pilot exit status: 0
[2025-04-29 17:38:19] 2025-04-29 08:38:19,346 [wrapper] pandaids: 6619661549
[2025-04-29 17:38:19] 2025-04-29 08:38:19,358 [wrapper] cleanup supervisor_pilot  130870 86977
[2025-04-29 17:38:19] 2025-04-29 08:38:19,360 [wrapper] Test setup, not cleaning
[2025-04-29 17:38:19] 2025-04-29 08:38:19,361 [wrapper] apfmon messages muted
[2025-04-29 17:38:19] 2025-04-29 08:38:19,362 [wrapper] ==== wrapper stdout END ====
[2025-04-29 17:38:19] 2025-04-29 08:38:19,363 [wrapper] ==== wrapper stderr END ====
[2025-04-29 17:38:19]  *** Error codes and diagnostics ***
[2025-04-29 17:38:19]     "exeErrorCode": 0,
[2025-04-29 17:38:19]     "exeErrorDiag": "",
[2025-04-29 17:38:19]     "pilotErrorCode": 0,
[2025-04-29 17:38:19]     "pilotErrorDiag": "",
[2025-04-29 17:38:19]  *** Listing of results directory ***
[2025-04-29 17:38:19] total 419560
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc    495897 Apr 29 02:53 pilot3.tar.gz
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc      5111 Apr 29 03:07 queuedata.json
[2025-04-29 17:38:19] -rwx------. 1 boinc boinc     37140 Apr 29 03:08 runpilot2-wrapper.sh
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc       100 Apr 29 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 17:38:19] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 16:19 run_atlas
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc       105 Apr 29 16:19 job.xml
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc      9509 Apr 29 16:19 init_data.xml
[2025-04-29 17:38:19] -rw-r--r--. 2 boinc boinc 223561439 Apr 29 16:19 EVNT.44292255._003993.pool.root.1
[2025-04-29 17:38:19] -rw-r--r--. 2 boinc boinc     17569 Apr 29 16:19 start_atlas.sh
[2025-04-29 17:38:19] drwxrwx--x. 2 boinc boinc        68 Apr 29 16:19 shared
[2025-04-29 17:38:19] -rw-r--r--. 2 boinc boinc    508884 Apr 29 16:19 input.tar.gz
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc         0 Apr 29 16:19 boinc_lockfile
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc      2551 Apr 29 16:19 pandaJob.out
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc       424 Apr 29 16:19 setup.sh.local
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc    995552 Apr 29 16:19 agis_schedconf.cvmfs.json
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc   1596659 Apr 29 16:19 agis_ddmendpoints.agis.ALL.json
[2025-04-29 17:38:19] drwx------. 4 boinc boinc      4096 Apr 29 16:19 pilot3
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc 200709869 Apr 29 17:37 HITS.44292257._034260.pool.root.1
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc       529 Apr 29 17:37 boinc_task_state.xml
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc      1018 Apr 29 17:37 memory_monitor_summary.json
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc    286460 Apr 29 17:37 log.44292257._034260.job.log.tgz.1
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc        95 Apr 29 17:37 pilot_heartbeat.json
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc      8192 Apr 29 17:37 boinc_mmap_file
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc        27 Apr 29 17:37 wrapper_checkpoint.txt
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc      7665 Apr 29 17:38 heartbeat.json
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc      4426 Apr 29 17:38 pilotlog.txt
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc    475746 Apr 29 17:38 log.44292257._034260.job.log.1
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc       357 Apr 29 17:38 output.list
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc       620 Apr 29 17:38 runtime_log
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc    778240 Apr 29 17:38 result.tar.gz
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc     10971 Apr 29 17:38 runtime_log.err
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc       641 Apr 29 17:38 JeILDmw4hT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmBVvLDmsLV6Sm.diag
[2025-04-29 17:38:19] -rw-r--r--. 1 boinc boinc     21938 Apr 29 17:38 stderr.txt
[2025-04-29 17:38:19] HITS file was successfully produced:
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc 200709869 Apr 29 17:37 shared/HITS.pool.root.1
[2025-04-29 17:38:19]  *** Contents of shared directory: ***
[2025-04-29 17:38:19] total 415612
[2025-04-29 17:38:19] -rw-r--r--. 2 boinc boinc 223561439 Apr 29 16:19 ATLAS.root_0
[2025-04-29 17:38:19] -rw-r--r--. 2 boinc boinc     17569 Apr 29 16:19 start_atlas.sh
[2025-04-29 17:38:19] -rw-r--r--. 2 boinc boinc    508884 Apr 29 16:19 input.tar.gz
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc 200709869 Apr 29 17:37 HITS.pool.root.1
[2025-04-29 17:38:19] -rw-------. 1 boinc boinc    778240 Apr 29 17:38 result.tar.gz
17:38:20 (83267): run_atlas exited; CPU time 22340.007504
17:38:20 (83267): called boinc_finish(0)

</stderr_txt>
]]>

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