Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:08:23 (4110454): wrapper (7.7.26015): starting
05:08:23 (4110454): wrapper: running run_atlas (--nthreads 2)
[2025-04-29 05:08:23] Arguments: --nthreads 2
[2025-04-29 05:08:23] Threads: 2
[2025-04-29 05:08:23] Checking for CVMFS
[2025-04-29 05:08:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 05:08:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 05:08:23] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 05:08:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 05:08:24] 2.11.0.0 4052693 19 43076 145395 0 185 2004315 4194304 0 130560 0 153866 99.999 1241 349 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-29 05:08:24] CVMFS is ok
[2025-04-29 05:08:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-29 05:08:24] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-29 05:08:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-29 05:08:24] Further information can be found at the LHC@home message board.
[2025-04-29 05:08:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 05:08:24] Checking for apptainer binary...
[2025-04-29 05:08:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-29 05:08:24] Running /usr/bin/apptainer --version
[2025-04-29 05:08:24] apptainer version 1.2.2-1.el8
[2025-04-29 05:08:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 05:08:24] bottom
[2025-04-29 05:08:24] apptainer works
[2025-04-29 05:08:24] Set ATHENA_PROC_NUMBER=2
[2025-04-29 05:08:24] Set ATHENA_CORE_NUMBER=2
[2025-04-29 05:08:24] Starting ATLAS job with PandaID=6618577486
[2025-04-29 05:08:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 05:21:04]  *** The last 200 lines of the pilot log: ***
[2025-04-29 05:21:04] 2025-04-29 03:20:48,509 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-29 05:21:04] 2025-04-29 03:20:51,013 | INFO     | monitor loop #236: job 0:6618577486 is in state 'failed'
[2025-04-29 05:21:04] 2025-04-29 03:20:51,013 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-29 05:21:04] 2025-04-29 03:20:51,918 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-29 05:21:04] 2025-04-29 03:20:51,919 | WARNING  | file does not exist either: /var/lib/boinc/slots/4/PanDA_Pilot-6618577486/memory_monitor_output.txt
[2025-04-29 05:21:04] 2025-04-29 03:20:51,919 | INFO     | memory summary dictionary not yet available
[2025-04-29 05:21:04] 2025-04-29 03:20:51,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-29 05:21:04] 2025-04-29 03:20:51,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-29 05:21:04] 2025-04-29 03:20:51,921 | INFO     | ..............................
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . Timing measurements:
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . get job = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . initial setup = 6 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . payload setup = 12 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,923 | INFO     | . stage-in = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,923 | INFO     | . payload execution = 257 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,923 | INFO     | . stage-out = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,924 | INFO     | . log creation = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,924 | INFO     | ..............................
[2025-04-29 05:21:04] 2025-04-29 03:20:51,924 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-29 05:21:04] 2025-04-29 03:20:51,925 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/4/PanDA_Pilot-6618577486/pilotlog.txt
[2025-04-29 05:21:04] 2025-04-29 03:20:51,953 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-29 05:21:04] - Log from pilotlog.txt -
[2025-04-29 05:21:04] 2025-04-29 03:20:48,509 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-29 05:21:04] 2025-04-29 03:20:51,013 | INFO     | monitor loop #236: job 0:6618577486 is in state 'failed'
[2025-04-29 05:21:04] 2025-04-29 03:20:51,013 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-29 05:21:04] 2025-04-29 03:20:51,918 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-29 05:21:04] 2025-04-29 03:20:51,919 | WARNING  | file does not exist either: /var/lib/boinc/slots/4/PanDA_Pilot-6618577486/memory_monitor_output.txt
[2025-04-29 05:21:04] 2025-04-29 03:20:51,919 | INFO     | memory summary dictionary not yet available
[2025-04-29 05:21:04] 2025-04-29 03:20:51,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-29 05:21:04] 2025-04-29 03:20:51,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-29 05:21:04] 2025-04-29 03:20:51,921 | INFO     | ..............................
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . Timing measurements:
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . get job = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . initial setup = 6 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . payload setup = 12 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,923 | INFO     | . stage-in = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,923 | INFO     | . payload execution = 257 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,923 | INFO     | . stage-out = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,924 | INFO     | . log creation = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,924 | INFO     | ..............................
[2025-04-29 05:21:04] 2025-04-29 03:20:51,924 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-29 05:21:04] 2025-04-29 03:20:51,925 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/4/PanDA_Pilot-6618577486/pilotlog.txt
[2025-04-29 05:21:04] 2025-04-29 03:20:51,953 | WARNING  | 
[2025-04-29 05:21:04] [begin log extracts]
[2025-04-29 05:21:04] - Log from pilotlog.txt -
[2025-04-29 05:21:04] 2025-04-29 03:20:48,509 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-29 05:21:04] 2025-04-29 03:20:51,013 | INFO     | monitor loop #236: job 0:6618577486 is in state 'failed'
[2025-04-29 05:21:04] 2025-04-29 03:20:51,013 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-29 05:21:04] 2025-04-29 03:20:51,918 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-29 05:21:04] 2025-04-29 03:20:51,919 | WARNING  | file does not exist either: /var/lib/boinc/slots/4/PanDA_Pilot-6618577486/memory_monitor_output.txt
[2025-04-29 05:21:04] 2025-04-29 03:20:51,919 | INFO     | memory summary dictionary not yet available
[2025-04-29 05:21:04] 2025-04-29 03:20:51,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-29 05:21:04] 2025-04-29 03:20:51,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-29 05:21:04] 2025-04-29 03:20:51,921 | INFO     | ..............................
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . Timing measurements:
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . get job = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . initial setup = 6 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,922 | INFO     | . payload setup = 12 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,923 | INFO     | . stage-in = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,923 | INFO     | . payload execution = 257 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,923 | INFO     | . stage-out = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,924 | INFO     | . log creation = 0 s
[2025-04-29 05:21:04] 2025-04-29 03:20:51,924 | INFO     | ..............................
[2025-04-29 05:21:04] 2025-04-29 03:20:51,924 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-29 05:21:04] 2025-04-29 03:20:51,925 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/4/PanDA_Pilot-6618577486/pilotlog.txt
[2025-04-29 05:21:04] [end log extracts]
[2025-04-29 05:21:04] 2025-04-29 03:20:51,954 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-04-29 05:21:04] 2025-04-29 03:20:51,956 | WARNING  | pilotErrorDiags = ["Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-04-29 05:21:04] 2025-04-29 03:20:52,198 | INFO     | 
[2025-04-29 05:21:04] 2025-04-29 03:20:52,198 | INFO     | job summary report
[2025-04-29 05:21:04] 2025-04-29 03:20:52,198 | INFO     | --------------------------------------------------
[2025-04-29 05:21:04] 2025-04-29 03:20:52,199 | INFO     | PanDA job id: 6618577486
[2025-04-29 05:21:04] 2025-04-29 03:20:52,199 | INFO     | task id: 44292257
[2025-04-29 05:21:04] 2025-04-29 03:20:52,199 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-04-29 05:13:35,333 CRITICAL Transform executor raised TransformValidationExceptio
[2025-04-29 05:21:04] 2025-04-29 03:20:52,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 05:21:04] 2025-04-29 03:20:52,200 | INFO     | pilot state: failed 
[2025-04-29 05:21:04] 2025-04-29 03:20:52,200 | INFO     | transexitcode: 65
[2025-04-29 05:21:04] 2025-04-29 03:20:52,200 | INFO     | exeerrorcode: 65
[2025-04-29 05:21:04] 2025-04-29 03:20:52,201 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 5813.01 KB/s
[2025-04-29 05:21:04] 2025-04-29 03:20:52,201 | INFO     | exitcode: 65
[2025-04-29 05:21:04] 2025-04-29 03:20:52,201 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 5813.01 KB/s
[2025-04-29 05:21:04] 2025-04-29 03:20:52,201 | INFO     | cpuconsumptiontime: 266 s
[2025-04-29 05:21:04] 2025-04-29 03:20:52,202 | INFO     | nevents: 0
[2025-04-29 05:21:04] 2025-04-29 03:20:52,202 | INFO     | neventsw: 0
[2025-04-29 05:21:04] 2025-04-29 03:20:52,202 | INFO     | pid: 4120362
[2025-04-29 05:21:04] 2025-04-29 03:20:52,202 | INFO     | pgrp: 4120362
[2025-04-29 05:21:04] 2025-04-29 03:20:52,203 | INFO     | corecount: 2
[2025-04-29 05:21:04] 2025-04-29 03:20:52,203 | INFO     | event service: False
[2025-04-29 05:21:04] 2025-04-29 03:20:52,203 | INFO     | sizes: {0: 2393508, 1: 2393536, 2: 2393707, 11: 2393941, 13: 2393969, 334: 2418059, 335: 2422297, 337: 2422353, 702: 2422523}
[2025-04-29 05:21:04] 2025-04-29 03:20:52,204 | INFO     | --------------------------------------------------
[2025-04-29 05:21:04] 2025-04-29 03:20:52,204 | INFO     | 
[2025-04-29 05:21:04] 2025-04-29 03:20:52,204 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-04-29 05:21:04] 2025-04-29 03:20:52,288 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,289 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,292 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 05:21:04] 2025-04-29 03:20:52,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 05:21:04] 2025-04-29 03:20:52,294 | INFO     | job 6618577486 has completed (purged errors)
[2025-04-29 05:21:04] 2025-04-29 03:20:52,295 | INFO     | overall cleanup function is called
[2025-04-29 05:21:04] 2025-04-29 03:20:53,304 | INFO     | --- collectZombieJob: --- 10, [4120362]
[2025-04-29 05:21:04] 2025-04-29 03:20:53,305 | INFO     | zombie collector waiting for pid 4120362
[2025-04-29 05:21:04] 2025-04-29 03:20:53,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 05:21:04] 2025-04-29 03:20:53,305 | INFO     | collected zombie processes
[2025-04-29 05:21:04] 2025-04-29 03:20:53,306 | INFO     | will attempt to kill all subprocesses of pid=4120362
[2025-04-29 05:21:04] 2025-04-29 03:20:53,453 | INFO     | process IDs to be killed: [4120362] (in reverse order)
[2025-04-29 05:21:04] 2025-04-29 03:20:53,531 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 05:21:04] 2025-04-29 03:20:53,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 05:21:04] 2025-04-29 03:20:53,539 | INFO     | did not find any defunct processes belonging to 4120362
[2025-04-29 05:21:04] 2025-04-29 03:20:53,545 | INFO     | did not find any defunct processes belonging to 4120362
[2025-04-29 05:21:04] 2025-04-29 03:20:53,546 | INFO     | ready for new job
[2025-04-29 05:21:04] 2025-04-29 03:20:53,546 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 05:21:04] 2025-04-29 03:20:53,549 | INFO     | **************************************
[2025-04-29 05:21:04] 2025-04-29 03:20:53,549 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 05:21:04] 2025-04-29 03:20:53,549 | INFO     | **************************************
[2025-04-29 05:21:04] 2025-04-29 03:20:53,550 | INFO     | 
[2025-04-29 05:21:04] 2025-04-29 03:20:53,562 | INFO     | architecture information:
[2025-04-29 05:21:04] 2025-04-29 03:20:53,563 | INFO     | executing command: cat /etc/os-release
[2025-04-29 05:21:04] 2025-04-29 03:20:53,633 | INFO     | cat /etc/os-release:
[2025-04-29 05:21:04] NAME="CentOS Linux"
[2025-04-29 05:21:04] VERSION="7 (Core)"
[2025-04-29 05:21:04] ID="centos"
[2025-04-29 05:21:04] ID_LIKE="rhel fedora"
[2025-04-29 05:21:04] VERSION_ID="7"
[2025-04-29 05:21:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 05:21:04] ANSI_COLOR="0;31"
[2025-04-29 05:21:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 05:21:04] HOME_URL="https://www.centos.org/"
[2025-04-29 05:21:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 05:21:04] 
[2025-04-29 05:21:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 05:21:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 05:21:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 05:21:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 05:21:04] 
[2025-04-29 05:21:04] 2025-04-29 03:20:53,634 | INFO     | **************************************
[2025-04-29 05:21:04] 2025-04-29 03:20:54,136 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-04-29 05:21:04] 2025-04-29 03:20:54,210 | INFO     | sufficient remaining disk space (215185620992 B)
[2025-04-29 05:21:04] 2025-04-29 03:20:54,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 05:21:04] 2025-04-29 03:20:54,211 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 05:21:04] 2025-04-29 03:20:54,211 | INFO     | update_server=False
[2025-04-29 05:21:04] 2025-04-29 03:20:54,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 05:21:04] 2025-04-29 03:20:54,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 05:21:04] 2025-04-29 03:20:54,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 05:21:04] 2025-04-29 03:20:54,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 05:21:04] 2025-04-29 03:20:54,527 | INFO     | aborting loop
[2025-04-29 05:21:04] 2025-04-29 03:20:54,798 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 05:21:04] 2025-04-29 03:20:54,799 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 05:21:04] 2025-04-29 03:20:54,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 05:21:04] 2025-04-29 03:20:54,835 | INFO     | all data control threads have been joined
[2025-04-29 05:21:04] 2025-04-29 03:20:55,137 | INFO     | all payload control threads have been joined
[2025-04-29 05:21:04] 2025-04-29 03:20:55,218 | INFO     | [job] retrieve thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:55,449 | INFO     | all job control threads have been joined
[2025-04-29 05:21:04] 2025-04-29 03:20:55,483 | INFO     | [payload] failed_post thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:55,533 | INFO     | [job] job monitor thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:55,585 | INFO     | [job] validate thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:55,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:55,707 | INFO     | [data] copytool_in thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:55,733 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:55,841 | INFO     | [data] control thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:55,856 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:56,082 | INFO     | [payload] validate_post thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:56,143 | INFO     | [payload] control thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:56,219 | INFO     | [data] copytool_out thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:56,454 | INFO     | [job] control thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:56,570 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:57,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 05:21:04] 2025-04-29 03:20:58,211 | INFO     | [job] queue monitor thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:58,219 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 05:21:04] 2025-04-29 03:20:58,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306154497856)>', '<ExcThread(monitor, started 140305567311616)>']
[2025-04-29 05:21:04] 2025-04-29 03:20:58,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 05:21:04] 2025-04-29 03:20:58,816 | INFO     | [monitor] control thread has ended
[2025-04-29 05:21:04] 2025-04-29 03:21:03,431 | INFO     | all workflow threads have been joined
[2025-04-29 05:21:04] 2025-04-29 03:21:03,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 05:21:04] 2025-04-29 03:21:03,432 | INFO     | traces error code: 0
[2025-04-29 05:21:04] 2025-04-29 03:21:03,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 05:21:04] 2025-04-29 03:21:03,958 [wrapper] ==== pilot stdout END ====
[2025-04-29 05:21:04] 2025-04-29 03:21:03,963 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 05:21:04] 2025-04-29 03:21:03,971 [wrapper] pilotpid: 4114020
[2025-04-29 05:21:04] 2025-04-29 03:21:03,976 [wrapper] Pilot exit status: 0
[2025-04-29 05:21:04] 2025-04-29 03:21:04,004 [wrapper] pandaids: 6618577486
[2025-04-29 05:21:04] 2025-04-29 03:21:04,050 [wrapper] cleanup supervisor_pilot 4114026 4114021
[2025-04-29 05:21:04] 2025-04-29 03:21:04,057 [wrapper] Test setup, not cleaning
[2025-04-29 05:21:04] 2025-04-29 03:21:04,063 [wrapper] apfmon messages muted
[2025-04-29 05:21:04] 2025-04-29 03:21:04,069 [wrapper] ==== wrapper stdout END ====
[2025-04-29 05:21:04] 2025-04-29 03:21:04,075 [wrapper] ==== wrapper stderr END ====
[2025-04-29 05:21:04]  *** Error codes and diagnostics ***
[2025-04-29 05:21:04]     "exeErrorCode": 65,
[2025-04-29 05:21:04]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 5813.01 KB/s",
[2025-04-29 05:21:04]     "pilotErrorCode": 1305,
[2025-04-29 05:21:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 5813.01 KB/s",
[2025-04-29 05:21:04]  *** Listing of results directory ***
[2025-04-29 05:21:04] total 31156
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc   495897 Apr 28 09:57 pilot3.tar.gz
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc     5111 Apr 28 10:00 queuedata.json
[2025-04-29 05:21:04] -rwx------ 1 boinc boinc    37140 Apr 28 10:01 runpilot2-wrapper.sh
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc      100 Apr 29 05:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 05:21:04] -rwxr-xr-x 1 boinc boinc     7986 Apr 29 05:08 run_atlas
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc      105 Apr 29 05:08 job.xml
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc     6036 Apr 29 05:08 init_data.xml
[2025-04-29 05:21:04] -rw-r--r-- 2 boinc boinc 27626178 Apr 29 05:08 EVNT.44292255._003198.pool.root.1
[2025-04-29 05:21:04] -rw-r--r-- 2 boinc boinc   508885 Apr 29 05:08 input.tar.gz
[2025-04-29 05:21:04] drwxrwx--x 2 boinc boinc       68 Apr 29 05:08 shared
[2025-04-29 05:21:04] -rw-r--r-- 2 boinc boinc    17569 Apr 29 05:08 start_atlas.sh
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc        0 Apr 29 05:08 boinc_lockfile
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc     2549 Apr 29 05:08 pandaJob.out
[2025-04-29 05:21:04] -rw------- 1 boinc boinc      424 Apr 29 05:08 setup.sh.local
[2025-04-29 05:21:04] -rw------- 1 boinc boinc   995438 Apr 29 05:08 agis_schedconf.cvmfs.json
[2025-04-29 05:21:04] -rw------- 1 boinc boinc  1596659 Apr 29 05:08 agis_ddmendpoints.agis.ALL.json
[2025-04-29 05:21:04] drwx------ 4 boinc boinc      334 Apr 29 05:08 pilot3
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc      524 Apr 29 05:13 boinc_task_state.xml
[2025-04-29 05:21:04] -rw------- 1 boinc boinc    48123 Apr 29 05:14 log.44292257._030163.job.log.tgz.1
[2025-04-29 05:21:04] -rw------- 1 boinc boinc       96 Apr 29 05:20 pilot_heartbeat.json
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc       24 Apr 29 05:20 wrapper_checkpoint.txt
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc     8192 Apr 29 05:20 boinc_mmap_file
[2025-04-29 05:21:04] -rw------- 1 boinc boinc     8242 Apr 29 05:20 heartbeat.json
[2025-04-29 05:21:04] -rw------- 1 boinc boinc     4354 Apr 29 05:21 pilotlog.txt
[2025-04-29 05:21:04] -rw------- 1 boinc boinc   177684 Apr 29 05:21 log.44292257._030163.job.log.1
[2025-04-29 05:21:04] -rw------- 1 boinc boinc      188 Apr 29 05:21 output.list
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc      620 Apr 29 05:21 runtime_log
[2025-04-29 05:21:04] -rw------- 1 boinc boinc   245760 Apr 29 05:21 result.tar.gz
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc    10815 Apr 29 05:21 runtime_log.err
[2025-04-29 05:21:04] -rw------- 1 boinc boinc      637 Apr 29 05:21 P4cKDmGcYT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmAQuLDmY7nHQm.diag
[2025-04-29 05:21:04] -rw-r--r-- 1 boinc boinc    22057 Apr 29 05:21 stderr.txt
[2025-04-29 05:21:04] No HITS result produced
[2025-04-29 05:21:04]  *** Contents of shared directory: ***
[2025-04-29 05:21:04] total 27740
[2025-04-29 05:21:04] -rw-r--r-- 2 boinc boinc 27626178 Apr 29 05:08 ATLAS.root_0
[2025-04-29 05:21:04] -rw-r--r-- 2 boinc boinc   508885 Apr 29 05:08 input.tar.gz
[2025-04-29 05:21:04] -rw-r--r-- 2 boinc boinc    17569 Apr 29 05:08 start_atlas.sh
[2025-04-29 05:21:04] -rw------- 1 boinc boinc   245760 Apr 29 05:21 result.tar.gz
05:21:05 (4110454): run_atlas exited; CPU time 243.733046
05:21:05 (4110454): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN