Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:30:31 (523114): wrapper (7.7.26015): starting
02:30:31 (523114): wrapper: running run_atlas (--nthreads 12)
[2025-04-29 02:30:31] Arguments: --nthreads 12
[2025-04-29 02:30:31] Threads: 12
[2025-04-29 02:30:31] Checking for CVMFS
[2025-04-29 02:30:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 02:30:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 02:30:31] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 02:30:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 02:30:31] 2.11.5.0 2772 36989 227124 145406 2 186 39627780 45568001 9522 130560 0 237005093 99.775 203416272 29200 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-29 02:30:31] CVMFS is ok
[2025-04-29 02:30:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-29 02:30:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-29 02:30:31] Further information can be found at the LHC@home message board.
[2025-04-29 02:30:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 02:30:31] Checking for apptainer binary...
[2025-04-29 02:30:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-29 02:30:31] Running /usr/bin/apptainer --version
[2025-04-29 02:30:31] apptainer version 1.3.5-1.el9
[2025-04-29 02:30:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 02:30:32] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0154.triumf.lcg
[2025-04-29 02:30:32] apptainer works
[2025-04-29 02:30:32] Set ATHENA_PROC_NUMBER=12
[2025-04-29 02:30:32] Set ATHENA_CORE_NUMBER=12
[2025-04-29 02:30:32] Starting ATLAS job with PandaID=6619661437
[2025-04-29 02:30:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 05:58:19]  *** The last 200 lines of the pilot log: ***
[2025-04-29 05:58:19] 2025-04-29 12:58:04,732 | INFO     | mean x: 1745925268.6715686
[2025-04-29 05:58:19] 2025-04-29 12:58:04,732 | INFO     | mean y: 2622891.470588235
[2025-04-29 05:58:19] 2025-04-29 12:58:04,733 | INFO     | -- intersect: -65729402163.78114
[2025-04-29 05:58:19] 2025-04-29 12:58:04,733 | INFO     | intersect: -65729402163.78114
[2025-04-29 05:58:19] 2025-04-29 12:58:04,733 | INFO     | chi2: 4.802234907023248
[2025-04-29 05:58:19] 2025-04-29 12:58:04,733 | INFO     | sum of square deviations: 2443413222.8442245
[2025-04-29 05:58:19] 2025-04-29 12:58:04,734 | INFO     | sum of deviations: 110007723883.83922
[2025-04-29 05:58:19] 2025-04-29 12:58:04,734 | INFO     | mean x: 1745925116.1758795
[2025-04-29 05:58:19] 2025-04-29 12:58:04,734 | INFO     | mean y: 2631472.6331658293
[2025-04-29 05:58:19] 2025-04-29 12:58:04,734 | INFO     | -- intersect: -78602676179.1626
[2025-04-29 05:58:19] 2025-04-29 12:58:04,734 | INFO     | intersect: -78602676179.1626
[2025-04-29 05:58:19] 2025-04-29 12:58:04,734 | INFO     | chi2: 4.115956263283765
[2025-04-29 05:58:19] 2025-04-29 12:58:04,735 | INFO     | current chi2=4.115956263283765 (change=14.29081785932219 %)
[2025-04-29 05:58:19] 2025-04-29 12:58:04,735 | INFO     | right removable region: 198
[2025-04-29 05:58:19] 2025-04-29 12:58:04,735 | INFO     | sum of square deviations: 2443391872.8442245
[2025-04-29 05:58:19] 2025-04-29 12:58:04,736 | INFO     | sum of deviations: 45757444469.03012
[2025-04-29 05:58:19] 2025-04-29 12:58:04,736 | INFO     | mean x: 1745925421.1758795
[2025-04-29 05:58:19] 2025-04-29 12:58:04,736 | INFO     | mean y: 2665826.256281407
[2025-04-29 05:58:19] 2025-04-29 12:58:04,736 | INFO     | -- intersect: -32693311595.29773
[2025-04-29 05:58:19] 2025-04-29 12:58:04,736 | INFO     | intersect: -32693311595.29773
[2025-04-29 05:58:19] 2025-04-29 12:58:04,736 | INFO     | chi2: 2.378565923568664
[2025-04-29 05:58:19] 2025-04-29 12:58:04,736 | INFO     | current chi2=2.378565923568664 (change=50.46960488979785 %)
[2025-04-29 05:58:19] 2025-04-29 12:58:04,737 | INFO     | sum of square deviations: 2263777830.1855736
[2025-04-29 05:58:19] 2025-04-29 12:58:04,737 | INFO     | sum of deviations: 8462183766.752604
[2025-04-29 05:58:19] 2025-04-29 12:58:04,737 | INFO     | mean x: 1745925573.6804123
[2025-04-29 05:58:19] 2025-04-29 12:58:04,738 | INFO     | mean y: 2697495.592783505
[2025-04-29 05:58:19] 2025-04-29 12:58:04,738 | INFO     | -- intersect: -6523712848.458284
[2025-04-29 05:58:19] 2025-04-29 12:58:04,738 | INFO     | intersect: -6523712848.458284
[2025-04-29 05:58:19] 2025-04-29 12:58:04,738 | INFO     | chi2: 1.3048767898293803
[2025-04-29 05:58:19] 2025-04-29 12:58:04,738 | INFO     | current chi2=1.3048767898293803 (change=45.14018817390531 %)
[2025-04-29 05:58:19] 2025-04-29 12:58:04,738 | INFO     | sum of square deviations: 2093187212.5185223
[2025-04-29 05:58:19] 2025-04-29 12:58:04,739 | INFO     | sum of deviations: -12238021699.77778
[2025-04-29 05:58:19] 2025-04-29 12:58:04,739 | INFO     | mean x: 1745925726.1851852
[2025-04-29 05:58:19] 2025-04-29 12:58:04,739 | INFO     | mean y: 2715832.365079365
[2025-04-29 05:58:19] 2025-04-29 12:58:04,739 | INFO     | -- intersect: 10210439630.537054
[2025-04-29 05:58:19] 2025-04-29 12:58:04,739 | INFO     | intersect: 10210439630.537054
[2025-04-29 05:58:19] 2025-04-29 12:58:04,739 | INFO     | chi2: 0.8183297364878674
[2025-04-29 05:58:19] 2025-04-29 12:58:04,739 | INFO     | current chi2=0.8183297364878674 (change=37.286819501566235 %)
[2025-04-29 05:58:19] 2025-04-29 12:58:04,740 | INFO     | sum of square deviations: 1931410392.0815213
[2025-04-29 05:58:19] 2025-04-29 12:58:04,740 | INFO     | sum of deviations: -5240500697.597827
[2025-04-29 05:58:19] 2025-04-29 12:58:04,741 | INFO     | mean x: 1745925878.6793478
[2025-04-29 05:58:19] 2025-04-29 12:58:04,741 | INFO     | mean y: 2709179.684782609
[2025-04-29 05:58:19] 2025-04-29 12:58:04,741 | INFO     | -- intersect: 4739934278.340582
[2025-04-29 05:58:19] 2025-04-29 12:58:04,741 | INFO     | intersect: 4739934278.340582
[2025-04-29 05:58:19] 2025-04-29 12:58:04,741 | INFO     | chi2: 0.7590053576805348
[2025-04-29 05:58:19] 2025-04-29 12:58:04,741 | INFO     | current chi2=0.7590053576805348 (change=7.249446789254272 %)
[2025-04-29 05:58:19] 2025-04-29 12:58:04,741 | INFO     | left removable region: 40
[2025-04-29 05:58:19] 2025-04-29 12:58:04,741 | INFO     | sum of square deviations: 1222877787.5443068
[2025-04-29 05:58:19] 2025-04-29 12:58:04,742 | INFO     | sum of deviations: 6899465948.316455
[2025-04-29 05:58:19] 2025-04-29 12:58:04,742 | INFO     | mean x: 1745926305.658228
[2025-04-29 05:58:19] 2025-04-29 12:58:04,742 | INFO     | mean y: 2721399.4873417723
[2025-04-29 05:58:19] 2025-04-29 12:58:04,742 | INFO     | -- intersect: -9847779784.566954
[2025-04-29 05:58:19] 2025-04-29 12:58:04,742 | INFO     | intersect: -9847779784.566954
[2025-04-29 05:58:19] 2025-04-29 12:58:04,742 | INFO     | chi2: 0.001187634489630529
[2025-04-29 05:58:19] 2025-04-29 12:58:04,742 | INFO     | -- intersect: -9847779784.566954
[2025-04-29 05:58:19] 2025-04-29 12:58:04,743 | INFO     | current memory leak: 5.64 B/s (using 158 data points, chi2=0.00)
[2025-04-29 05:58:19] 2025-04-29 12:58:04,743 | INFO     | ..............................
[2025-04-29 05:58:19] 2025-04-29 12:58:04,743 | INFO     | . Timing measurements:
[2025-04-29 05:58:19] 2025-04-29 12:58:04,743 | INFO     | . get job = 0 s
[2025-04-29 05:58:19] 2025-04-29 12:58:04,743 | INFO     | . initial setup = 3 s
[2025-04-29 05:58:19] 2025-04-29 12:58:04,743 | INFO     | . payload setup = 8 s
[2025-04-29 05:58:19] 2025-04-29 12:58:04,743 | INFO     | . stage-in = 0 s
[2025-04-29 05:58:19] 2025-04-29 12:58:04,743 | INFO     | . payload execution = 12400 s
[2025-04-29 05:58:19] 2025-04-29 12:58:04,743 | INFO     | . stage-out = 2 s
[2025-04-29 05:58:19] 2025-04-29 12:58:04,743 | INFO     | . log creation = 0 s
[2025-04-29 05:58:19] 2025-04-29 12:58:04,744 | INFO     | ..............................
[2025-04-29 05:58:19] 2025-04-29 12:58:05,052 | INFO     | 
[2025-04-29 05:58:19] 2025-04-29 12:58:05,052 | INFO     | job summary report
[2025-04-29 05:58:19] 2025-04-29 12:58:05,052 | INFO     | --------------------------------------------------
[2025-04-29 05:58:19] 2025-04-29 12:58:05,052 | INFO     | PanDA job id: 6619661437
[2025-04-29 05:58:19] 2025-04-29 12:58:05,052 | INFO     | task id: 44292257
[2025-04-29 05:58:19] 2025-04-29 12:58:05,052 | INFO     | errors: (none)
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | pilot state: finished 
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | transexitcode: 0
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | exeerrorcode: 0
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | exeerrordiag: 
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | exitcode: 0
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | exitmsg: OK
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | cpuconsumptiontime: 35230 s
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | nevents: 400
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | neventsw: 0
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | pid: 533083
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | pgrp: 533083
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | corecount: 12
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | event service: False
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | sizes: {0: 2392904, 1: 2393757, 7: 2393963, 12: 2393991, 12413: 2423469, 12417: 2432588, 12423: 2432702}
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | --------------------------------------------------
[2025-04-29 05:58:19] 2025-04-29 12:58:05,053 | INFO     | 
[2025-04-29 05:58:19] 2025-04-29 12:58:05,054 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-29 05:58:19] 2025-04-29 12:58:05,107 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,107 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,107 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,108 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,109 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 05:58:19] 2025-04-29 12:58:05,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,110 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 05:58:19] 2025-04-29 12:58:05,110 | INFO     | job 6619661437 has completed (purged errors)
[2025-04-29 05:58:19] 2025-04-29 12:58:05,110 | INFO     | overall cleanup function is called
[2025-04-29 05:58:19] 2025-04-29 12:58:06,121 | INFO     | --- collectZombieJob: --- 10, [533083]
[2025-04-29 05:58:19] 2025-04-29 12:58:06,121 | INFO     | zombie collector waiting for pid 533083
[2025-04-29 05:58:19] 2025-04-29 12:58:06,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 05:58:19] 2025-04-29 12:58:06,121 | INFO     | collected zombie processes
[2025-04-29 05:58:19] 2025-04-29 12:58:06,121 | INFO     | will attempt to kill all subprocesses of pid=533083
[2025-04-29 05:58:19] 2025-04-29 12:58:06,466 | INFO     | process IDs to be killed: [533083] (in reverse order)
[2025-04-29 05:58:19] 2025-04-29 12:58:06,698 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 05:58:19] 2025-04-29 12:58:06,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 05:58:19] 2025-04-29 12:58:06,716 | INFO     | did not find any defunct processes belonging to 533083
[2025-04-29 05:58:19] 2025-04-29 12:58:06,725 | INFO     | did not find any defunct processes belonging to 533083
[2025-04-29 05:58:19] 2025-04-29 12:58:06,725 | INFO     | ready for new job
[2025-04-29 05:58:19] 2025-04-29 12:58:06,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 05:58:19] 2025-04-29 12:58:06,727 | INFO     | **************************************
[2025-04-29 05:58:19] 2025-04-29 12:58:06,727 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 05:58:19] 2025-04-29 12:58:06,727 | INFO     | **************************************
[2025-04-29 05:58:19] 2025-04-29 12:58:06,727 | INFO     | 
[2025-04-29 05:58:19] 2025-04-29 12:58:06,729 | INFO     | architecture information:
[2025-04-29 05:58:19] 2025-04-29 12:58:06,730 | INFO     | executing command: cat /etc/os-release
[2025-04-29 05:58:19] 2025-04-29 12:58:06,747 | INFO     | cat /etc/os-release:
[2025-04-29 05:58:19] NAME="CentOS Linux"
[2025-04-29 05:58:19] VERSION="7 (Core)"
[2025-04-29 05:58:19] ID="centos"
[2025-04-29 05:58:19] ID_LIKE="rhel fedora"
[2025-04-29 05:58:19] VERSION_ID="7"
[2025-04-29 05:58:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 05:58:19] ANSI_COLOR="0;31"
[2025-04-29 05:58:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 05:58:19] HOME_URL="https://www.centos.org/"
[2025-04-29 05:58:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 05:58:19] 
[2025-04-29 05:58:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 05:58:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 05:58:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 05:58:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 05:58:19] 
[2025-04-29 05:58:19] 2025-04-29 12:58:06,747 | INFO     | **************************************
[2025-04-29 05:58:19] 2025-04-29 12:58:07,250 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-29 05:58:19] 2025-04-29 12:58:07,266 | INFO     | sufficient remaining disk space (1743522889728 B)
[2025-04-29 05:58:19] 2025-04-29 12:58:07,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 05:58:19] 2025-04-29 12:58:07,267 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 05:58:19] 2025-04-29 12:58:07,267 | INFO     | update_server=False
[2025-04-29 05:58:19] 2025-04-29 12:58:07,267 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 05:58:19] 2025-04-29 12:58:07,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 05:58:19] 2025-04-29 12:58:07,287 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 05:58:19] 2025-04-29 12:58:07,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 05:58:19] 2025-04-29 12:58:07,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 05:58:19] 2025-04-29 12:58:07,318 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-29 05:58:19] 2025-04-29 12:58:07,318 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-29 05:58:19] 2025-04-29 12:58:07,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 05:58:19] 2025-04-29 12:58:07,318 | INFO     | will abort loop
[2025-04-29 05:58:19] 2025-04-29 12:58:07,352 | INFO     | all data control threads have been joined
[2025-04-29 05:58:19] 2025-04-29 12:58:07,706 | INFO     | all payload control threads have been joined
[2025-04-29 05:58:19] 2025-04-29 12:58:08,273 | INFO     | [job] retrieve thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:08,324 | INFO     | [job] job monitor thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:08,357 | INFO     | [data] control thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:08,429 | INFO     | all job control threads have been joined
[2025-04-29 05:58:19] 2025-04-29 12:58:08,474 | INFO     | [payload] validate_post thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:08,603 | INFO     | [payload] failed_post thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:08,607 | INFO     | [data] copytool_in thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:08,623 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:08,712 | INFO     | [payload] control thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:08,778 | INFO     | [job] validate thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:08,828 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:09,092 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:09,275 | INFO     | [data] copytool_out thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:09,382 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:09,435 | INFO     | [job] control thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:09,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 05:58:19] 2025-04-29 12:58:09,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 05:58:19] 2025-04-29 12:58:10,833 | INFO     | [job] queue monitor thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:13,753 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 05:58:19] 2025-04-29 12:58:14,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837350823744)>', '<ExcThread(monitor, started 139836803503872)>']
[2025-04-29 05:58:19] 2025-04-29 12:58:14,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 05:58:19] 2025-04-29 12:58:14,326 | INFO     | [monitor] control thread has ended
[2025-04-29 05:58:19] 2025-04-29 12:58:19,286 | INFO     | all workflow threads have been joined
[2025-04-29 05:58:19] 2025-04-29 12:58:19,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 05:58:19] 2025-04-29 12:58:19,287 | INFO     | traces error code: 0
[2025-04-29 05:58:19] 2025-04-29 12:58:19,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 05:58:19] 2025-04-29 12:58:19,405 [wrapper] ==== pilot stdout END ====
[2025-04-29 05:58:19] 2025-04-29 12:58:19,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 05:58:19] 2025-04-29 12:58:19,412 [wrapper] pilotpid: 526721
[2025-04-29 05:58:19] 2025-04-29 12:58:19,415 [wrapper] Pilot exit status: 0
[2025-04-29 05:58:19] 2025-04-29 12:58:19,474 [wrapper] pandaids: 6619661437
[2025-04-29 05:58:19] 2025-04-29 12:58:19,588 [wrapper] cleanup supervisor_pilot 1371198 526722
[2025-04-29 05:58:19] 2025-04-29 12:58:19,600 [wrapper] Test setup, not cleaning
[2025-04-29 05:58:19] 2025-04-29 12:58:19,624 [wrapper] apfmon messages muted
[2025-04-29 05:58:19] 2025-04-29 12:58:19,644 [wrapper] ==== wrapper stdout END ====
[2025-04-29 05:58:19] 2025-04-29 12:58:19,682 [wrapper] ==== wrapper stderr END ====
[2025-04-29 05:58:19]  *** Error codes and diagnostics ***
[2025-04-29 05:58:19]     "exeErrorCode": 0,
[2025-04-29 05:58:19]     "exeErrorDiag": "",
[2025-04-29 05:58:19]     "pilotErrorCode": 0,
[2025-04-29 05:58:19]     "pilotErrorDiag": "",
[2025-04-29 05:58:19]  *** Listing of results directory ***
[2025-04-29 05:58:19] total 422904
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc      5111 Apr 28 10:53 queuedata.json
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc    495897 Apr 28 10:53 pilot3.tar.gz
[2025-04-29 05:58:19] -rwx------. 1 boinc boinc     37140 Apr 28 10:53 runpilot2-wrapper.sh
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc       100 Apr 29 02:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 05:58:19] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 02:30 run_atlas
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc       105 Apr 29 02:30 job.xml
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc      6598 Apr 29 02:30 init_data.xml
[2025-04-29 05:58:19] -rw-r--r--. 2 boinc boinc 223845172 Apr 29 02:30 EVNT.44292255._003989.pool.root.1
[2025-04-29 05:58:19] -rw-r--r--. 2 boinc boinc     17569 Apr 29 02:30 start_atlas.sh
[2025-04-29 05:58:19] drwxrwx--x. 2 boinc boinc      4096 Apr 29 02:30 shared
[2025-04-29 05:58:19] -rw-r--r--. 2 boinc boinc    508881 Apr 29 02:30 input.tar.gz
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc         0 Apr 29 02:30 boinc_lockfile
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc      2551 Apr 29 02:30 pandaJob.out
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc       424 Apr 29 02:30 setup.sh.local
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc    995552 Apr 29 02:30 agis_schedconf.cvmfs.json
[2025-04-29 05:58:19] drwx------. 4 boinc boinc      4096 Apr 29 02:30 pilot3
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc 202462787 Apr 29 05:57 HITS.44292257._034150.pool.root.1
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc       530 Apr 29 05:57 boinc_task_state.xml
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc        95 Apr 29 05:57 pilot_heartbeat.json
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc      1043 Apr 29 05:57 memory_monitor_summary.json
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc   1596659 Apr 29 05:57 agis_ddmendpoints.agis.ALL.json
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc    432459 Apr 29 05:57 log.44292257._034150.job.log.tgz.1
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc      7727 Apr 29 05:58 heartbeat.json
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc      8192 Apr 29 05:58 boinc_mmap_file
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc        28 Apr 29 05:58 wrapper_checkpoint.txt
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc      4538 Apr 29 05:58 pilotlog.txt
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc   1016097 Apr 29 05:58 log.44292257._034150.job.log.1
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc       357 Apr 29 05:58 output.list
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc       620 Apr 29 05:58 runtime_log
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc   1464320 Apr 29 05:58 result.tar.gz
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc     11145 Apr 29 05:58 runtime_log.err
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc       665 Apr 29 05:58 gSSMDm1qhT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHUvLDmnX87hn.diag
[2025-04-29 05:58:19] -rw-r--r--. 1 boinc boinc     20962 Apr 29 05:58 stderr.txt
[2025-04-29 05:58:19] HITS file was successfully produced:
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc 202462787 Apr 29 05:57 shared/HITS.pool.root.1
[2025-04-29 05:58:19]  *** Contents of shared directory: ***
[2025-04-29 05:58:19] total 418280
[2025-04-29 05:58:19] -rw-r--r--. 2 boinc boinc 223845172 Apr 29 02:30 ATLAS.root_0
[2025-04-29 05:58:19] -rw-r--r--. 2 boinc boinc     17569 Apr 29 02:30 start_atlas.sh
[2025-04-29 05:58:19] -rw-r--r--. 2 boinc boinc    508881 Apr 29 02:30 input.tar.gz
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc 202462787 Apr 29 05:57 HITS.pool.root.1
[2025-04-29 05:58:19] -rw-------. 1 boinc boinc   1464320 Apr 29 05:58 result.tar.gz
05:58:21 (523114): run_atlas exited; CPU time 35512.446093
05:58:21 (523114): called boinc_finish(0)

</stderr_txt>
]]>

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