Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:11:03 (3627799): wrapper (7.7.26015): starting
01:11:03 (3627799): wrapper: running run_atlas (--nthreads 12)
[2025-04-29 01:11:03] Arguments: --nthreads 12
[2025-04-29 01:11:03] Threads: 12
[2025-04-29 01:11:03] Checking for CVMFS
[2025-04-29 01:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 01:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 01:11:03] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 01:11:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 01:11:04] 2.11.5.0 2581 36920 223640 145403 3 556 23720512 45567450 11155 130560 0 317800806 99.785 244340863 26230 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-29 01:11:04] CVMFS is ok
[2025-04-29 01:11:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-29 01:11:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-29 01:11:04] Further information can be found at the LHC@home message board.
[2025-04-29 01:11:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 01:11:04] Checking for apptainer binary...
[2025-04-29 01:11:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-29 01:11:04] Running /usr/bin/apptainer --version
[2025-04-29 01:11:04] apptainer version 1.3.5-1.el9
[2025-04-29 01:11:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 01:11:04] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0058.triumf.lcg
[2025-04-29 01:11:04] apptainer works
[2025-04-29 01:11:04] Set ATHENA_PROC_NUMBER=12
[2025-04-29 01:11:04] Set ATHENA_CORE_NUMBER=12
[2025-04-29 01:11:04] Starting ATLAS job with PandaID=6619082326
[2025-04-29 01:11:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 05:40:00]  *** The last 200 lines of the pilot log: ***
[2025-04-29 05:40:00] 2025-04-29 12:39:44,723 | INFO     | mean x: 1745922331.2205324
[2025-04-29 05:40:00] 2025-04-29 12:39:44,723 | INFO     | mean y: 2649264.878326996
[2025-04-29 05:40:00] 2025-04-29 12:39:44,724 | INFO     | -- intersect: -40777849315.20026
[2025-04-29 05:40:00] 2025-04-29 12:39:44,724 | INFO     | intersect: -40777849315.20026
[2025-04-29 05:40:00] 2025-04-29 12:39:44,724 | INFO     | chi2: 6.830441742762709
[2025-04-29 05:40:00] 2025-04-29 12:39:44,724 | INFO     | sum of square deviations: 5325446291.906978
[2025-04-29 05:40:00] 2025-04-29 12:39:44,725 | INFO     | sum of deviations: 148861658155.99982
[2025-04-29 05:40:00] 2025-04-29 12:39:44,725 | INFO     | mean x: 1745922178.7209303
[2025-04-29 05:40:00] 2025-04-29 12:39:44,725 | INFO     | mean y: 2657380.3333333335
[2025-04-29 05:40:00] 2025-04-29 12:39:44,725 | INFO     | -- intersect: -48800927575.67346
[2025-04-29 05:40:00] 2025-04-29 12:39:44,725 | INFO     | intersect: -48800927575.67346
[2025-04-29 05:40:00] 2025-04-29 12:39:44,726 | INFO     | chi2: 6.0407754157633455
[2025-04-29 05:40:00] 2025-04-29 12:39:44,726 | INFO     | current chi2=6.0407754157633455 (change=11.560984731859623 %)
[2025-04-29 05:40:00] 2025-04-29 12:39:44,726 | INFO     | right removable region: 257
[2025-04-29 05:40:00] 2025-04-29 12:39:44,726 | INFO     | sum of square deviations: 5325426833.4612665
[2025-04-29 05:40:00] 2025-04-29 12:39:44,727 | INFO     | sum of deviations: 53747477776.84885
[2025-04-29 05:40:00] 2025-04-29 12:39:44,727 | INFO     | mean x: 1745922483.7248063
[2025-04-29 05:40:00] 2025-04-29 12:39:44,727 | INFO     | mean y: 2686894.476744186
[2025-04-29 05:40:00] 2025-04-29 12:39:44,727 | INFO     | -- intersect: -17618234926.18961
[2025-04-29 05:40:00] 2025-04-29 12:39:44,727 | INFO     | intersect: -17618234926.18961
[2025-04-29 05:40:00] 2025-04-29 12:39:44,727 | INFO     | chi2: 3.740713555755087
[2025-04-29 05:40:00] 2025-04-29 12:39:44,727 | INFO     | current chi2=3.740713555755087 (change=45.2346759311927 %)
[2025-04-29 05:40:00] 2025-04-29 12:39:44,728 | INFO     | sum of square deviations: 5021766240.703553
[2025-04-29 05:40:00] 2025-04-29 12:39:44,729 | INFO     | sum of deviations: -7814154237.098827
[2025-04-29 05:40:00] 2025-04-29 12:39:44,729 | INFO     | mean x: 1745922636.229249
[2025-04-29 05:40:00] 2025-04-29 12:39:44,729 | INFO     | mean y: 2717812.743083004
[2025-04-29 05:40:00] 2025-04-29 12:39:44,729 | INFO     | -- intersect: 2719472857.0053897
[2025-04-29 05:40:00] 2025-04-29 12:39:44,729 | INFO     | intersect: 2719472857.0053897
[2025-04-29 05:40:00] 2025-04-29 12:39:44,729 | INFO     | chi2: 1.9326643379158908
[2025-04-29 05:40:00] 2025-04-29 12:39:44,729 | INFO     | current chi2=1.9326643379158908 (change=48.33434025060574 %)
[2025-04-29 05:40:00] 2025-04-29 12:39:44,729 | INFO     | sum of square deviations: 4729873310.435477
[2025-04-29 05:40:00] 2025-04-29 12:39:44,730 | INFO     | sum of deviations: -48820220133.5887
[2025-04-29 05:40:00] 2025-04-29 12:39:44,730 | INFO     | mean x: 1745922788.733871
[2025-04-29 05:40:00] 2025-04-29 12:39:44,730 | INFO     | mean y: 2739136.415322581
[2025-04-29 05:40:00] 2025-04-29 12:39:44,730 | INFO     | -- intersect: 18023588594.302597
[2025-04-29 05:40:00] 2025-04-29 12:39:44,730 | INFO     | intersect: 18023588594.302597
[2025-04-29 05:40:00] 2025-04-29 12:39:44,730 | INFO     | chi2: 0.9733060058736477
[2025-04-29 05:40:00] 2025-04-29 12:39:44,731 | INFO     | current chi2=0.9733060058736477 (change=49.63915943504071 %)
[2025-04-29 05:40:00] 2025-04-29 12:39:44,731 | INFO     | sum of square deviations: 4449530607.629648
[2025-04-29 05:40:00] 2025-04-29 12:39:44,732 | INFO     | sum of deviations: -54792669241.92591
[2025-04-29 05:40:00] 2025-04-29 12:39:44,732 | INFO     | mean x: 1745922941.2345679
[2025-04-29 05:40:00] 2025-04-29 12:39:44,732 | INFO     | mean y: 2742342.0864197533
[2025-04-29 05:40:00] 2025-04-29 12:39:44,732 | INFO     | -- intersect: 21502488422.475353
[2025-04-29 05:40:00] 2025-04-29 12:39:44,732 | INFO     | intersect: 21502488422.475353
[2025-04-29 05:40:00] 2025-04-29 12:39:44,732 | INFO     | chi2: 0.9159609686038542
[2025-04-29 05:40:00] 2025-04-29 12:39:44,732 | INFO     | current chi2=0.9159609686038542 (change=5.891778836638336 %)
[2025-04-29 05:40:00] 2025-04-29 12:39:44,732 | INFO     | left removable region: 40
[2025-04-29 05:40:00] 2025-04-29 12:39:44,732 | INFO     | sum of square deviations: 3168677369.5391526
[2025-04-29 05:40:00] 2025-04-29 12:39:44,733 | INFO     | sum of deviations: -19951063114.290314
[2025-04-29 05:40:00] 2025-04-29 12:39:44,733 | INFO     | mean x: 1745923368.2396314
[2025-04-29 05:40:00] 2025-04-29 12:39:44,733 | INFO     | mean y: 2743312.870967742
[2025-04-29 05:40:00] 2025-04-29 12:39:44,733 | INFO     | -- intersect: 10995666621.28885
[2025-04-29 05:40:00] 2025-04-29 12:39:44,733 | INFO     | intersect: 10995666621.28885
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | chi2: 0.05787258223596717
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | -- intersect: 10995666621.28885
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | current memory leak: -6.30 B/s (using 217 data points, chi2=0.06)
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | ..............................
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | . Timing measurements:
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | . get job = 0 s
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | . initial setup = 3 s
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | . payload setup = 13 s
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | . stage-in = 0 s
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | . payload execution = 16028 s
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | . stage-out = 5 s
[2025-04-29 05:40:00] 2025-04-29 12:39:44,734 | INFO     | . log creation = 1 s
[2025-04-29 05:40:00] 2025-04-29 12:39:44,735 | INFO     | ..............................
[2025-04-29 05:40:00] 2025-04-29 12:39:44,788 | INFO     | 
[2025-04-29 05:40:00] 2025-04-29 12:39:44,788 | INFO     | job summary report
[2025-04-29 05:40:00] 2025-04-29 12:39:44,788 | INFO     | --------------------------------------------------
[2025-04-29 05:40:00] 2025-04-29 12:39:44,788 | INFO     | PanDA job id: 6619082326
[2025-04-29 05:40:00] 2025-04-29 12:39:44,788 | INFO     | task id: 44270688
[2025-04-29 05:40:00] 2025-04-29 12:39:44,788 | INFO     | errors: (none)
[2025-04-29 05:40:00] 2025-04-29 12:39:44,788 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 05:40:00] 2025-04-29 12:39:44,788 | INFO     | pilot state: finished 
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | transexitcode: 0
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | exeerrorcode: 0
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | exeerrordiag: 
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | exitcode: 0
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | exitmsg: OK
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | cpuconsumptiontime: 44078 s
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | nevents: 400
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | neventsw: 0
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | pid: 3661834
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | pgrp: 3661834
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | corecount: 12
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | event service: False
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | sizes: {0: 2393437, 1: 2393636, 11: 2393842, 12: 2393870, 16046: 2424764, 16047: 2424763, 16054: 2433882, 16057: 2433938, 16075: 2434108}
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | --------------------------------------------------
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | 
[2025-04-29 05:40:00] 2025-04-29 12:39:44,789 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-29 05:40:00] 2025-04-29 12:39:44,813 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,813 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,813 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,813 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | job 6619082326 has completed (purged errors)
[2025-04-29 05:40:00] 2025-04-29 12:39:44,814 | INFO     | overall cleanup function is called
[2025-04-29 05:40:00] 2025-04-29 12:39:45,833 | INFO     | --- collectZombieJob: --- 10, [3661834]
[2025-04-29 05:40:00] 2025-04-29 12:39:45,834 | INFO     | zombie collector waiting for pid 3661834
[2025-04-29 05:40:00] 2025-04-29 12:39:45,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 05:40:00] 2025-04-29 12:39:45,834 | INFO     | collected zombie processes
[2025-04-29 05:40:00] 2025-04-29 12:39:45,834 | INFO     | will attempt to kill all subprocesses of pid=3661834
[2025-04-29 05:40:00] 2025-04-29 12:39:46,497 | INFO     | PID=3645942 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-29 05:40:00] 2025-04-29 12:39:46,497 | INFO     | .. there are 42 such processes running
[2025-04-29 05:40:00] 2025-04-29 12:39:46,909 | INFO     | process IDs to be killed: [3661834] (in reverse order)
[2025-04-29 05:40:00] 2025-04-29 12:39:47,204 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 05:40:00] 2025-04-29 12:39:47,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 05:40:00] 2025-04-29 12:39:47,230 | INFO     | did not find any defunct processes belonging to 3661834
[2025-04-29 05:40:00] 2025-04-29 12:39:47,260 | INFO     | did not find any defunct processes belonging to 3661834
[2025-04-29 05:40:00] 2025-04-29 12:39:47,260 | INFO     | ready for new job
[2025-04-29 05:40:00] 2025-04-29 12:39:47,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 05:40:00] 2025-04-29 12:39:47,279 | INFO     | **************************************
[2025-04-29 05:40:00] 2025-04-29 12:39:47,279 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 05:40:00] 2025-04-29 12:39:47,279 | INFO     | **************************************
[2025-04-29 05:40:00] 2025-04-29 12:39:47,279 | INFO     | 
[2025-04-29 05:40:00] 2025-04-29 12:39:47,281 | INFO     | architecture information:
[2025-04-29 05:40:00] 2025-04-29 12:39:47,281 | INFO     | executing command: cat /etc/os-release
[2025-04-29 05:40:00] 2025-04-29 12:39:47,347 | INFO     | cat /etc/os-release:
[2025-04-29 05:40:00] NAME="CentOS Linux"
[2025-04-29 05:40:00] VERSION="7 (Core)"
[2025-04-29 05:40:00] ID="centos"
[2025-04-29 05:40:00] ID_LIKE="rhel fedora"
[2025-04-29 05:40:00] VERSION_ID="7"
[2025-04-29 05:40:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 05:40:00] ANSI_COLOR="0;31"
[2025-04-29 05:40:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 05:40:00] HOME_URL="https://www.centos.org/"
[2025-04-29 05:40:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 05:40:00] 
[2025-04-29 05:40:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 05:40:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 05:40:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 05:40:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 05:40:00] 
[2025-04-29 05:40:00] 2025-04-29 12:39:47,347 | INFO     | **************************************
[2025-04-29 05:40:00] 2025-04-29 12:39:47,851 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-29 05:40:00] 2025-04-29 12:39:47,866 | INFO     | sufficient remaining disk space (886605611008 B)
[2025-04-29 05:40:00] 2025-04-29 12:39:47,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 05:40:00] 2025-04-29 12:39:47,867 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 05:40:00] 2025-04-29 12:39:47,867 | INFO     | update_server=False
[2025-04-29 05:40:00] 2025-04-29 12:39:47,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 05:40:00] 2025-04-29 12:39:47,868 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 05:40:00] 2025-04-29 12:39:47,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 05:40:00] 2025-04-29 12:39:47,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 05:40:00] 2025-04-29 12:39:47,872 | INFO     | aborting loop
[2025-04-29 05:40:00] 2025-04-29 12:39:47,876 | INFO     | all payload control threads have been joined
[2025-04-29 05:40:00] 2025-04-29 12:39:48,504 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 05:40:00] 2025-04-29 12:39:48,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 05:40:00] 2025-04-29 12:39:48,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 05:40:00] 2025-04-29 12:39:48,563 | INFO     | all data control threads have been joined
[2025-04-29 05:40:00] 2025-04-29 12:39:48,727 | INFO     | all job control threads have been joined
[2025-04-29 05:40:00] 2025-04-29 12:39:48,873 | INFO     | [job] retrieve thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:48,878 | INFO     | [job] job monitor thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:48,882 | INFO     | [payload] control thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:48,928 | INFO     | [job] validate thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:48,928 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:49,035 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:49,051 | INFO     | [payload] failed_post thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:49,569 | INFO     | [data] control thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:49,621 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:49,646 | INFO     | [data] copytool_in thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:49,733 | INFO     | [job] control thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:49,868 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 05:40:00] 2025-04-29 12:39:49,892 | INFO     | [data] copytool_out thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:50,080 | INFO     | [payload] validate_post thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:50,211 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:50,874 | INFO     | [job] queue monitor thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:51,877 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 05:40:00] 2025-04-29 12:39:53,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477280548672)>', '<ExcThread(monitor, started 140476720060160)>']
[2025-04-29 05:40:00] 2025-04-29 12:39:54,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 05:40:00] 2025-04-29 12:39:54,541 | INFO     | [monitor] control thread has ended
[2025-04-29 05:40:00] 2025-04-29 12:39:58,627 | INFO     | all workflow threads have been joined
[2025-04-29 05:40:00] 2025-04-29 12:39:58,627 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 05:40:00] 2025-04-29 12:39:58,627 | INFO     | traces error code: 0
[2025-04-29 05:40:00] 2025-04-29 12:39:58,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 05:40:00] 2025-04-29 12:39:59,076 [wrapper] ==== pilot stdout END ====
[2025-04-29 05:40:00] 2025-04-29 12:39:59,115 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 05:40:00] 2025-04-29 12:39:59,174 [wrapper] pilotpid: 3645942
[2025-04-29 05:40:00] 2025-04-29 12:39:59,207 [wrapper] Pilot exit status: 0
[2025-04-29 05:40:00] 2025-04-29 12:39:59,335 [wrapper] pandaids: 6619082326
[2025-04-29 05:40:00] 2025-04-29 12:39:59,449 [wrapper] cleanup supervisor_pilot 1001787 3645943
[2025-04-29 05:40:00] 2025-04-29 12:39:59,455 [wrapper] Test setup, not cleaning
[2025-04-29 05:40:00] 2025-04-29 12:39:59,495 [wrapper] apfmon messages muted
[2025-04-29 05:40:00] 2025-04-29 12:39:59,510 [wrapper] ==== wrapper stdout END ====
[2025-04-29 05:40:00] 2025-04-29 12:39:59,544 [wrapper] ==== wrapper stderr END ====
[2025-04-29 05:40:00]  *** Error codes and diagnostics ***
[2025-04-29 05:40:00]     "exeErrorCode": 0,
[2025-04-29 05:40:00]     "exeErrorDiag": "",
[2025-04-29 05:40:00]     "pilotErrorCode": 0,
[2025-04-29 05:40:00]     "pilotErrorDiag": "",
[2025-04-29 05:40:00]  *** Listing of results directory ***
[2025-04-29 05:40:00] total 425568
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc    495897 Apr 28 06:31 pilot3.tar.gz
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc      5111 Apr 28 06:48 queuedata.json
[2025-04-29 05:40:00] -rwx------. 1 boinc boinc     37140 Apr 28 06:49 runpilot2-wrapper.sh
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc       100 Apr 29 01:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 05:40:00] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 01:11 run_atlas
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc       105 Apr 29 01:11 job.xml
[2025-04-29 05:40:00] -rw-r--r--. 2 boinc boinc 216347299 Apr 29 01:11 EVNT.44270686._000049.pool.root.1
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc      6602 Apr 29 01:11 init_data.xml
[2025-04-29 05:40:00] -rw-r--r--. 2 boinc boinc     17569 Apr 29 01:11 start_atlas.sh
[2025-04-29 05:40:00] drwxrwx--x. 2 boinc boinc      4096 Apr 29 01:11 shared
[2025-04-29 05:40:00] -rw-r--r--. 2 boinc boinc    508852 Apr 29 01:11 input.tar.gz
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc         0 Apr 29 01:11 boinc_lockfile
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc      2465 Apr 29 01:11 pandaJob.out
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc       424 Apr 29 01:11 setup.sh.local
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc    995552 Apr 29 01:11 agis_schedconf.cvmfs.json
[2025-04-29 05:40:00] drwx------. 4 boinc boinc      4096 Apr 29 01:11 pilot3
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc 212016790 Apr 29 05:38 HITS.44270688._001128.pool.root.1
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc       530 Apr 29 05:38 boinc_task_state.xml
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc      1047 Apr 29 05:39 memory_monitor_summary.json
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc   1596659 Apr 29 05:39 agis_ddmendpoints.agis.ALL.json
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc    451172 Apr 29 05:39 log.44270688._001128.job.log.tgz.1
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc        95 Apr 29 05:39 pilot_heartbeat.json
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc      7728 Apr 29 05:39 heartbeat.json
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc      8192 Apr 29 05:39 boinc_mmap_file
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc        28 Apr 29 05:39 wrapper_checkpoint.txt
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc      4351 Apr 29 05:39 pilotlog.txt
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc   1334034 Apr 29 05:39 log.44270688._001128.job.log.1
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc       357 Apr 29 05:40 output.list
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc       620 Apr 29 05:40 runtime_log
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc   1802240 Apr 29 05:40 result.tar.gz
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc     11145 Apr 29 05:40 runtime_log.err
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc       666 Apr 29 05:40 lFnNDmD2dT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm5sCLDmBKVehm.diag
[2025-04-29 05:40:00] -rw-r--r--. 1 boinc boinc     21098 Apr 29 05:40 stderr.txt
[2025-04-29 05:40:00] HITS file was successfully produced:
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc 212016790 Apr 29 05:38 shared/HITS.pool.root.1
[2025-04-29 05:40:00]  *** Contents of shared directory: ***
[2025-04-29 05:40:00] total 420616
[2025-04-29 05:40:00] -rw-r--r--. 2 boinc boinc 216347299 Apr 29 01:11 ATLAS.root_0
[2025-04-29 05:40:00] -rw-r--r--. 2 boinc boinc     17569 Apr 29 01:11 start_atlas.sh
[2025-04-29 05:40:00] -rw-r--r--. 2 boinc boinc    508852 Apr 29 01:11 input.tar.gz
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc 212016790 Apr 29 05:38 HITS.pool.root.1
[2025-04-29 05:40:00] -rw-------. 1 boinc boinc   1802240 Apr 29 05:40 result.tar.gz
05:40:01 (3627799): run_atlas exited; CPU time 44394.156490
05:40:01 (3627799): called boinc_finish(0)

</stderr_txt>
]]>

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