Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:45:10 (2414248): wrapper (7.7.26015): starting
19:45:10 (2414248): wrapper: running run_atlas (--nthreads 12)
[2025-04-28 19:45:10] Arguments: --nthreads 12
[2025-04-28 19:45:10] Threads: 12
[2025-04-28 19:45:10] Checking for CVMFS
[2025-04-28 19:45:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 19:45:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 19:45:13] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 19:45:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 19:45:14] 2.12.7.0 2414525 0 23732 145384 3 1 3359830 4096000 0 130560 0 0 0.000 1170 778 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-28 19:45:14] CVMFS is ok
[2025-04-28 19:45:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 19:45:14] Checking for apptainer binary...
[2025-04-28 19:45:14] apptainer is not installed, using version from CVMFS
[2025-04-28 19:45:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 19:45:14] ryzen7
[2025-04-28 19:45:14] apptainer works
[2025-04-28 19:45:14] Set ATHENA_PROC_NUMBER=12
[2025-04-28 19:45:14] Set ATHENA_CORE_NUMBER=12
[2025-04-28 19:45:14] Starting ATLAS job with PandaID=6618623289
[2025-04-28 19:45:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 21:42:30]  *** The last 200 lines of the pilot log: ***
[2025-04-28 21:42:30] 2025-04-28 21:42:09,982 | INFO     | sum of square deviations: 412686807.5
[2025-04-28 21:42:30] 2025-04-28 21:42:09,982 | INFO     | sum of deviations: 52139038831.5
[2025-04-28 21:42:30] 2025-04-28 21:42:09,982 | INFO     | mean x: 1745872873.5
[2025-04-28 21:42:30] 2025-04-28 21:42:09,982 | INFO     | mean y: 2530237.9363636365
[2025-04-28 21:42:30] 2025-04-28 21:42:09,982 | INFO     | -- intersect: -220571842123.7946
[2025-04-28 21:42:30] 2025-04-28 21:42:09,982 | INFO     | intersect: -220571842123.7946
[2025-04-28 21:42:30] 2025-04-28 21:42:09,982 | INFO     | chi2: 4.5289248810179545
[2025-04-28 21:42:30] 2025-04-28 21:42:09,983 | INFO     | current chi2=4.5289248810179545 (change=0.1522367539123872 %)
[2025-04-28 21:42:30] 2025-04-28 21:42:09,983 | INFO     | right removable region: 109
[2025-04-28 21:42:30] 2025-04-28 21:42:09,983 | INFO     | sum of square deviations: 412686807.5
[2025-04-28 21:42:30] 2025-04-28 21:42:09,983 | INFO     | sum of deviations: 24721450724.000004
[2025-04-28 21:42:30] 2025-04-28 21:42:09,983 | INFO     | mean x: 1745873178.5
[2025-04-28 21:42:30] 2025-04-28 21:42:09,983 | INFO     | mean y: 2614221.5272727273
[2025-04-28 21:42:30] 2025-04-28 21:42:09,983 | INFO     | -- intersect: -104581581270.6948
[2025-04-28 21:42:30] 2025-04-28 21:42:09,983 | INFO     | intersect: -104581581270.6948
[2025-04-28 21:42:30] 2025-04-28 21:42:09,983 | INFO     | chi2: 1.871913945973193
[2025-04-28 21:42:30] 2025-04-28 21:42:09,984 | INFO     | current chi2=1.871913945973193 (change=58.730509910208404 %)
[2025-04-28 21:42:30] 2025-04-28 21:42:09,984 | INFO     | sum of square deviations: 358927660.0
[2025-04-28 21:42:30] 2025-04-28 21:42:09,984 | INFO     | sum of deviations: -191572634.99999955
[2025-04-28 21:42:30] 2025-04-28 21:42:09,984 | INFO     | mean x: 1745873331.0
[2025-04-28 21:42:30] 2025-04-28 21:42:09,984 | INFO     | mean y: 2684930.2095238096
[2025-04-28 21:42:30] 2025-04-28 21:42:09,984 | INFO     | -- intersect: 934520482.7994145
[2025-04-28 21:42:30] 2025-04-28 21:42:09,984 | INFO     | intersect: 934520482.7994145
[2025-04-28 21:42:30] 2025-04-28 21:42:09,984 | INFO     | chi2: 0.15028090102174585
[2025-04-28 21:42:30] 2025-04-28 21:42:09,984 | INFO     | current chi2=0.15028090102174585 (change=91.9718050423725 %)
[2025-04-28 21:42:30] 2025-04-28 21:42:09,985 | INFO     | sum of square deviations: 310052325.0
[2025-04-28 21:42:30] 2025-04-28 21:42:09,985 | INFO     | sum of deviations: -3963488968.999998
[2025-04-28 21:42:30] 2025-04-28 21:42:09,985 | INFO     | mean x: 1745873483.5
[2025-04-28 21:42:30] 2025-04-28 21:42:09,985 | INFO     | mean y: 2696266.32
[2025-04-28 21:42:30] 2025-04-28 21:42:09,985 | INFO     | -- intersect: 22320704341.64035
[2025-04-28 21:42:30] 2025-04-28 21:42:09,985 | INFO     | intersect: 22320704341.64035
[2025-04-28 21:42:30] 2025-04-28 21:42:09,985 | INFO     | chi2: 0.0145594324688593
[2025-04-28 21:42:30] 2025-04-28 21:42:09,985 | INFO     | current chi2=0.0145594324688593 (change=90.31185442070743 %)
[2025-04-28 21:42:30] 2025-04-28 21:42:09,985 | INFO     | sum of square deviations: 265828240.0
[2025-04-28 21:42:30] 2025-04-28 21:42:09,986 | INFO     | sum of deviations: -2750609803.9999995
[2025-04-28 21:42:30] 2025-04-28 21:42:09,986 | INFO     | mean x: 1745873636.0
[2025-04-28 21:42:30] 2025-04-28 21:42:09,986 | INFO     | mean y: 2692071.2315789475
[2025-04-28 21:42:30] 2025-04-28 21:42:09,986 | INFO     | -- intersect: 18067804866.34592
[2025-04-28 21:42:30] 2025-04-28 21:42:09,986 | INFO     | intersect: 18067804866.34592
[2025-04-28 21:42:30] 2025-04-28 21:42:09,986 | INFO     | chi2: 0.013063666623294237
[2025-04-28 21:42:30] 2025-04-28 21:42:09,986 | INFO     | current chi2=0.013063666623294237 (change=10.27351752044118 %)
[2025-04-28 21:42:30] 2025-04-28 21:42:09,986 | INFO     | left removable region: 40
[2025-04-28 21:42:30] 2025-04-28 21:42:09,986 | INFO     | sum of square deviations: 101843770.0
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | sum of deviations: 137125071.99999997
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | mean x: 1745874063.0
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | mean y: 2680016.637681159
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | -- intersect: -2348009736.813193
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | intersect: -2348009736.813193
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | chi2: 7.162173392585947e-05
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | -- intersect: -2348009736.813193
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | current memory leak: 1.35 B/s (using 69 data points, chi2=0.00)
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | ..............................
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | . Timing measurements:
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | . get job = 0 s
[2025-04-28 21:42:30] 2025-04-28 21:42:09,987 | INFO     | . initial setup = 1 s
[2025-04-28 21:42:30] 2025-04-28 21:42:09,988 | INFO     | . payload setup = 2 s
[2025-04-28 21:42:30] 2025-04-28 21:42:09,988 | INFO     | . stage-in = 0 s
[2025-04-28 21:42:30] 2025-04-28 21:42:09,988 | INFO     | . payload execution = 6977 s
[2025-04-28 21:42:30] 2025-04-28 21:42:09,988 | INFO     | . stage-out = 0 s
[2025-04-28 21:42:30] 2025-04-28 21:42:09,988 | INFO     | . log creation = 0 s
[2025-04-28 21:42:30] 2025-04-28 21:42:09,988 | INFO     | ..............................
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | 
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | job summary report
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | --------------------------------------------------
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | PanDA job id: 6618623289
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | task id: 44292257
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | errors: (none)
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | pilot state: finished 
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | transexitcode: 0
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | exeerrorcode: 0
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | exeerrordiag: 
[2025-04-28 21:42:30] 2025-04-28 21:42:10,043 | INFO     | exitcode: 0
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | exitmsg: OK
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | cpuconsumptiontime: 26928 s
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | nevents: 400
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | neventsw: 0
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | pid: 2433081
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | pgrp: 2433081
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | corecount: 12
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | event service: False
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | sizes: {0: 2393702, 2: 2393908, 11: 2393936, 6983: 2421129, 6984: 2430172, 6987: 2430286}
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | --------------------------------------------------
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | 
[2025-04-28 21:42:30] 2025-04-28 21:42:10,044 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | job 6618623289 has completed (purged errors)
[2025-04-28 21:42:30] 2025-04-28 21:42:10,058 | INFO     | overall cleanup function is called
[2025-04-28 21:42:30] 2025-04-28 21:42:11,019 | WARNING  | process 2433081 can no longer be monitored (due to stat problems) - aborting
[2025-04-28 21:42:30] 2025-04-28 21:42:11,056 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 21:42:30] 2025-04-28 21:42:11,063 | INFO     | --- collectZombieJob: --- 10, [2433081]
[2025-04-28 21:42:30] 2025-04-28 21:42:11,063 | INFO     | zombie collector waiting for pid 2433081
[2025-04-28 21:42:30] 2025-04-28 21:42:11,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 21:42:30] 2025-04-28 21:42:11,063 | INFO     | collected zombie processes
[2025-04-28 21:42:30] 2025-04-28 21:42:11,063 | INFO     | will attempt to kill all subprocesses of pid=2433081
[2025-04-28 21:42:30] 2025-04-28 21:42:11,170 | INFO     | number of running child processes to parent process 2433081: 1
[2025-04-28 21:42:30] 2025-04-28 21:42:11,170 | INFO     | maximum number of monitored processes: 6
[2025-04-28 21:42:30] 2025-04-28 21:42:11,170 | INFO     | aborting job monitoring since job object (job id=6618623289) has expired
[2025-04-28 21:42:30] 2025-04-28 21:42:11,191 | INFO     | process IDs to be killed: [2433081] (in reverse order)
[2025-04-28 21:42:30] 2025-04-28 21:42:11,222 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 21:42:30] 2025-04-28 21:42:11,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 21:42:30] 2025-04-28 21:42:11,224 | INFO     | did not find any defunct processes belonging to 2433081
[2025-04-28 21:42:30] 2025-04-28 21:42:11,226 | INFO     | did not find any defunct processes belonging to 2433081
[2025-04-28 21:42:30] 2025-04-28 21:42:11,226 | INFO     | ready for new job
[2025-04-28 21:42:30] 2025-04-28 21:42:11,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 21:42:30] 2025-04-28 21:42:11,227 | INFO     | **************************************
[2025-04-28 21:42:30] 2025-04-28 21:42:11,227 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 21:42:30] 2025-04-28 21:42:11,227 | INFO     | **************************************
[2025-04-28 21:42:30] 2025-04-28 21:42:11,227 | INFO     | 
[2025-04-28 21:42:30] 2025-04-28 21:42:11,246 | INFO     | architecture information:
[2025-04-28 21:42:30] 2025-04-28 21:42:11,247 | INFO     | executing command: cat /etc/os-release
[2025-04-28 21:42:30] 2025-04-28 21:42:11,255 | INFO     | cat /etc/os-release:
[2025-04-28 21:42:30] NAME="CentOS Linux"
[2025-04-28 21:42:30] VERSION="7 (Core)"
[2025-04-28 21:42:30] ID="centos"
[2025-04-28 21:42:30] ID_LIKE="rhel fedora"
[2025-04-28 21:42:30] VERSION_ID="7"
[2025-04-28 21:42:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 21:42:30] ANSI_COLOR="0;31"
[2025-04-28 21:42:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 21:42:30] HOME_URL="https://www.centos.org/"
[2025-04-28 21:42:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 21:42:30] 
[2025-04-28 21:42:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 21:42:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 21:42:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 21:42:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 21:42:30] 
[2025-04-28 21:42:30] 2025-04-28 21:42:11,255 | INFO     | **************************************
[2025-04-28 21:42:30] 2025-04-28 21:42:11,758 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-28 21:42:30] 2025-04-28 21:42:11,765 | INFO     | sufficient remaining disk space (169276866560 B)
[2025-04-28 21:42:30] 2025-04-28 21:42:11,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 21:42:30] 2025-04-28 21:42:11,765 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 21:42:30] 2025-04-28 21:42:11,765 | INFO     | update_server=False
[2025-04-28 21:42:30] 2025-04-28 21:42:11,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 21:42:30] 2025-04-28 21:42:11,766 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-28 21:42:30] 2025-04-28 21:42:11,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 21:42:30] 2025-04-28 21:42:11,766 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 21:42:30] 2025-04-28 21:42:11,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 21:42:30] 2025-04-28 21:42:11,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 21:42:30] 2025-04-28 21:42:11,766 | INFO     | will abort loop
[2025-04-28 21:42:30] 2025-04-28 21:42:11,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 21:42:30] 2025-04-28 21:42:12,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 21:42:30] 2025-04-28 21:42:12,642 | INFO     | all data control threads have been joined
[2025-04-28 21:42:30] 2025-04-28 21:42:12,770 | INFO     | [job] retrieve thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:12,770 | INFO     | [job] job monitor thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:12,770 | INFO     | [job] queue monitor thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:13,080 | INFO     | all job control threads have been joined
[2025-04-28 21:42:30] 2025-04-28 21:42:13,202 | INFO     | all payload control threads have been joined
[2025-04-28 21:42:30] 2025-04-28 21:42:13,434 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:13,466 | INFO     | [data] copytool_in thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:13,538 | INFO     | [job] validate thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:13,542 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:13,566 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:13,594 | INFO     | [payload] failed_post thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:13,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 21:42:30] 2025-04-28 21:42:13,646 | INFO     | [data] control thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:14,034 | INFO     | [payload] validate_post thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:14,086 | INFO     | [job] control thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:14,206 | INFO     | [payload] control thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:14,630 | INFO     | [data] copytool_out thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:17,610 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:22,382 | INFO     | job.realtimelogging is not enabled
[2025-04-28 21:42:30] 2025-04-28 21:42:23,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 21:42:30] 2025-04-28 21:42:25,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770548180800)>', '<ExcThread(monitor, started 139769971468032)>']
[2025-04-28 21:42:30] 2025-04-28 21:42:25,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 21:42:30] 2025-04-28 21:42:25,822 | INFO     | [monitor] control thread has ended
[2025-04-28 21:42:30] 2025-04-28 21:42:30,482 | INFO     | all workflow threads have been joined
[2025-04-28 21:42:30] 2025-04-28 21:42:30,482 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 21:42:30] 2025-04-28 21:42:30,482 | INFO     | traces error code: 0
[2025-04-28 21:42:30] 2025-04-28 21:42:30,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 21:42:30] 2025-04-28 21:42:30,535 [wrapper] ==== pilot stdout END ====
[2025-04-28 21:42:30] 2025-04-28 21:42:30,537 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 21:42:30] 2025-04-28 21:42:30,538 [wrapper] pilotpid: 2422273
[2025-04-28 21:42:30] 2025-04-28 21:42:30,539 [wrapper] Pilot exit status: 0
[2025-04-28 21:42:30] 2025-04-28 21:42:30,547 [wrapper] pandaids: 6618623289
[2025-04-28 21:42:30] 2025-04-28 21:42:30,567 [wrapper] cleanup supervisor_pilot 2485724 2422274
[2025-04-28 21:42:30] 2025-04-28 21:42:30,568 [wrapper] Test setup, not cleaning
[2025-04-28 21:42:30] 2025-04-28 21:42:30,570 [wrapper] apfmon messages muted
[2025-04-28 21:42:30] 2025-04-28 21:42:30,571 [wrapper] ==== wrapper stdout END ====
[2025-04-28 21:42:30] 2025-04-28 21:42:30,572 [wrapper] ==== wrapper stderr END ====
[2025-04-28 21:42:30]  *** Error codes and diagnostics ***
[2025-04-28 21:42:30]     "exeErrorCode": 0,
[2025-04-28 21:42:30]     "exeErrorDiag": "",
[2025-04-28 21:42:30]     "pilotErrorCode": 0,
[2025-04-28 21:42:30]     "pilotErrorDiag": "",
[2025-04-28 21:42:30]  *** Listing of results directory ***
[2025-04-28 21:42:30] total 227192
[2025-04-28 21:42:30] -rw-r--r-- 1 boinc boinc    495897 Apr 28 08:59 pilot3.tar.gz
[2025-04-28 21:42:30] -rw-r--r-- 1 boinc boinc      5111 Apr 28 09:13 queuedata.json
[2025-04-28 21:42:30] -rwx------ 1 boinc boinc     37140 Apr 28 09:13 runpilot2-wrapper.sh
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc       100 Apr 28 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 21:42:30] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 19:45 run_atlas
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc       105 Apr 28 19:45 job.xml
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc      9680 Apr 28 19:45 init_data.xml
[2025-04-28 21:42:30] -rw-r--r-- 2 boinc boinc  28273684 Apr 28 19:45 EVNT.44292255._003408.pool.root.1
[2025-04-28 21:42:30] -rw-r--r-- 2 boinc boinc     17569 Apr 28 19:45 start_atlas.sh
[2025-04-28 21:42:30] drwxrwx--x 2 boinc boinc      4096 Apr 28 19:45 shared
[2025-04-28 21:42:30] -rw-r--r-- 2 boinc boinc    508881 Apr 28 19:45 input.tar.gz
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc         0 Apr 28 19:45 boinc_lockfile
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc      2549 Apr 28 19:45 pandaJob.out
[2025-04-28 21:42:30] -rw------- 1 boinc boinc       424 Apr 28 19:45 setup.sh.local
[2025-04-28 21:42:30] -rw------- 1 boinc boinc    995073 Apr 28 19:45 agis_schedconf.cvmfs.json
[2025-04-28 21:42:30] -rw------- 1 boinc boinc   1596659 Apr 28 19:45 agis_ddmendpoints.agis.ALL.json
[2025-04-28 21:42:30] drwx------ 4 boinc boinc      4096 Apr 28 19:45 pilot3
[2025-04-28 21:42:30] -rw------- 1 boinc boinc 198399733 Apr 28 21:41 HITS.44292257._030803.pool.root.1
[2025-04-28 21:42:30] -rw------- 1 boinc boinc        95 Apr 28 21:41 pilot_heartbeat.json
[2025-04-28 21:42:30] -rw------- 1 boinc boinc      1037 Apr 28 21:42 memory_monitor_summary.json
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc      8192 Apr 28 21:42 boinc_mmap_file
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc        27 Apr 28 21:42 wrapper_checkpoint.txt
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc       529 Apr 28 21:42 boinc_task_state.xml
[2025-04-28 21:42:30] -rw------- 1 boinc boinc    373884 Apr 28 21:42 log.44292257._030803.job.log.tgz.1
[2025-04-28 21:42:30] -rw------- 1 boinc boinc      7649 Apr 28 21:42 heartbeat.json
[2025-04-28 21:42:30] -rw------- 1 boinc boinc      4574 Apr 28 21:42 pilotlog.txt
[2025-04-28 21:42:30] -rw------- 1 boinc boinc    690015 Apr 28 21:42 log.44292257._030803.job.log.1
[2025-04-28 21:42:30] -rw------- 1 boinc boinc       357 Apr 28 21:42 output.list
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc       620 Apr 28 21:42 runtime_log
[2025-04-28 21:42:30] -rw------- 1 boinc boinc   1085440 Apr 28 21:42 result.tar.gz
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc     11399 Apr 28 21:42 runtime_log.err
[2025-04-28 21:42:30] -rw------- 1 boinc boinc       649 Apr 28 21:42 HbHNDmbjZT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmrXuLDmC20fmn.diag
[2025-04-28 21:42:30] -rw-rw-r-- 1 boinc boinc     20456 Apr 28 21:42 stderr.txt
[2025-04-28 21:42:30] HITS file was successfully produced:
[2025-04-28 21:42:30] -rw------- 1 boinc boinc 198399733 Apr 28 21:41 shared/HITS.pool.root.1
[2025-04-28 21:42:30]  *** Contents of shared directory: ***
[2025-04-28 21:42:30] total 222948
[2025-04-28 21:42:30] -rw-r--r-- 2 boinc boinc  28273684 Apr 28 19:45 ATLAS.root_0
[2025-04-28 21:42:30] -rw-r--r-- 2 boinc boinc     17569 Apr 28 19:45 start_atlas.sh
[2025-04-28 21:42:30] -rw-r--r-- 2 boinc boinc    508881 Apr 28 19:45 input.tar.gz
[2025-04-28 21:42:30] -rw------- 1 boinc boinc 198399733 Apr 28 21:41 HITS.pool.root.1
[2025-04-28 21:42:30] -rw------- 1 boinc boinc   1085440 Apr 28 21:42 result.tar.gz
21:42:31 (2414248): run_atlas exited; CPU time 26965.730787
21:42:31 (2414248): called boinc_finish(0)

</stderr_txt>
]]>

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