Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:53:18 (2996): wrapper (7.7.26015): starting
14:53:18 (2996): wrapper: running run_atlas (--nthreads 10)
[2025-04-28 14:53:18] Arguments: --nthreads 10
[2025-04-28 14:53:18] Threads: 10
[2025-04-28 14:53:18] Checking for CVMFS
[2025-04-28 14:53:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 14:53:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 14:53:19] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 14:53:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 14:53:20] 2.11.2.0 16052 38916 144840 145383 2 243 17174751 18432001 8538 130560 0 89118410 98.374 307845173 39263 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-28 14:53:20] CVMFS is ok
[2025-04-28 14:53:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 14:53:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-28 14:53:20] Further information can be found at the LHC@home message board.
[2025-04-28 14:53:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 14:53:20] Checking for apptainer binary...
[2025-04-28 14:53:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 14:53:20] Running /usr/bin/apptainer --version
[2025-04-28 14:53:21] apptainer version 1.3.2-1.el7
[2025-04-28 14:53:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 14:53:40] c-211-3.aglt2.org
[2025-04-28 14:53:40] apptainer works
[2025-04-28 14:53:40] Set ATHENA_PROC_NUMBER=10
[2025-04-28 14:53:40] Set ATHENA_CORE_NUMBER=10
[2025-04-28 14:53:41] Starting ATLAS job with PandaID=6608807231
[2025-04-28 14:53:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:45:57 (19240): wrapper (7.7.26015): starting
20:45:57 (19240): wrapper: running run_atlas (--nthreads 10)
[2025-04-28 20:45:57] Arguments: --nthreads 10
[2025-04-28 20:45:57] Threads: 10
[2025-04-28 20:45:57] This job has been restarted, cleaning up previous attempt
[2025-04-28 20:45:57] Checking for CVMFS
[2025-04-28 20:45:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 20:45:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 20:45:58] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 20:45:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 20:45:58] 2.11.2.0 16052 39269 152356 145392 2 112 18395326 18432001 8181 130560 0 89630195 98.368 311532510 39265 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-28 20:45:58] CVMFS is ok
[2025-04-28 20:45:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 20:45:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-28 20:45:58] Further information can be found at the LHC@home message board.
[2025-04-28 20:45:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 20:45:58] Checking for apptainer binary...
[2025-04-28 20:45:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 20:45:58] Running /usr/bin/apptainer --version
[2025-04-28 20:45:58] apptainer version 1.3.2-1.el7
[2025-04-28 20:45:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 20:46:03] c-211-3.aglt2.org
[2025-04-28 20:46:03] apptainer works
[2025-04-28 20:46:03] Set ATHENA_PROC_NUMBER=10
[2025-04-28 20:46:03] Set ATHENA_CORE_NUMBER=10
[2025-04-28 20:46:03] Starting ATLAS job with PandaID=6608807231
[2025-04-28 20:46:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 06:52:50]  *** The last 200 lines of the pilot log: ***
[2025-04-29 06:52:50] 2025-04-29 10:52:33,159 | INFO     | mean x: 1745905671.1669507
[2025-04-29 06:52:50] 2025-04-29 10:52:33,159 | INFO     | mean y: 2510283.6660988075
[2025-04-29 06:52:50] 2025-04-29 10:52:33,160 | INFO     | -- intersect: -17632680837.283936
[2025-04-29 06:52:50] 2025-04-29 10:52:33,160 | INFO     | intersect: -17632680837.283936
[2025-04-29 06:52:50] 2025-04-29 10:52:33,161 | INFO     | chi2: 8.084793897863607
[2025-04-29 06:52:50] 2025-04-29 10:52:33,161 | INFO     | current chi2=8.084793897863607 (change=8.650627756078437 %)
[2025-04-29 06:52:50] 2025-04-29 10:52:33,161 | INFO     | right removable region: 586
[2025-04-29 06:52:50] 2025-04-29 10:52:33,162 | INFO     | sum of square deviations: 62717660260.970856
[2025-04-29 06:52:50] 2025-04-29 10:52:33,174 | INFO     | sum of deviations: 405106432774.70435
[2025-04-29 06:52:50] 2025-04-29 10:52:33,175 | INFO     | mean x: 1745905976.165247
[2025-04-29 06:52:50] 2025-04-29 10:52:33,175 | INFO     | mean y: 2525286.4463373083
[2025-04-29 06:52:50] 2025-04-29 10:52:33,175 | INFO     | -- intersect: -11274645115.34047
[2025-04-29 06:52:50] 2025-04-29 10:52:33,175 | INFO     | intersect: -11274645115.34047
[2025-04-29 06:52:50] 2025-04-29 10:52:33,176 | INFO     | chi2: 4.918383865510789
[2025-04-29 06:52:50] 2025-04-29 10:52:33,176 | INFO     | current chi2=4.918383865510789 (change=44.42761507033997 %)
[2025-04-29 06:52:50] 2025-04-29 10:52:33,177 | INFO     | sum of square deviations: 61128389281.62407
[2025-04-29 06:52:50] 2025-04-29 10:52:33,189 | INFO     | sum of deviations: 267171261115.47394
[2025-04-29 06:52:50] 2025-04-29 10:52:33,189 | INFO     | mean x: 1745906128.6752577
[2025-04-29 06:52:50] 2025-04-29 10:52:33,189 | INFO     | mean y: 2538520.171821306
[2025-04-29 06:52:50] 2025-04-29 10:52:33,189 | INFO     | -- intersect: -7628219425.017906
[2025-04-29 06:52:50] 2025-04-29 10:52:33,190 | INFO     | intersect: -7628219425.017906
[2025-04-29 06:52:50] 2025-04-29 10:52:33,193 | INFO     | chi2: 3.041924697455348
[2025-04-29 06:52:50] 2025-04-29 10:52:33,194 | INFO     | current chi2=3.041924697455348 (change=38.1519462361152 %)
[2025-04-29 06:52:50] 2025-04-29 10:52:33,195 | INFO     | sum of square deviations: 59566188577.15783
[2025-04-29 06:52:50] 2025-04-29 10:52:33,205 | INFO     | sum of deviations: 141305331825.97382
[2025-04-29 06:52:50] 2025-04-29 10:52:33,205 | INFO     | mean x: 1745906281.185442
[2025-04-29 06:52:50] 2025-04-29 10:52:33,205 | INFO     | mean y: 2550807.925476603
[2025-04-29 06:52:50] 2025-04-29 10:52:33,205 | INFO     | -- intersect: -4139158982.3592496
[2025-04-29 06:52:50] 2025-04-29 10:52:33,205 | INFO     | intersect: -4139158982.3592496
[2025-04-29 06:52:50] 2025-04-29 10:52:33,206 | INFO     | chi2: 1.4990455154438895
[2025-04-29 06:52:50] 2025-04-29 10:52:33,206 | INFO     | current chi2=1.4990455154438895 (change=50.720492302196654 %)
[2025-04-29 06:52:50] 2025-04-29 10:52:33,208 | INFO     | sum of square deviations: 58030931058.22908
[2025-04-29 06:52:50] 2025-04-29 10:52:33,217 | INFO     | sum of deviations: 65078872775.160866
[2025-04-29 06:52:50] 2025-04-29 10:52:33,218 | INFO     | mean x: 1745906433.6905594
[2025-04-29 06:52:50] 2025-04-29 10:52:33,218 | INFO     | mean y: 2558367.6223776224
[2025-04-29 06:52:50] 2025-04-29 10:52:33,218 | INFO     | -- intersect: -1955390963.9413905
[2025-04-29 06:52:50] 2025-04-29 10:52:33,218 | INFO     | intersect: -1955390963.9413905
[2025-04-29 06:52:50] 2025-04-29 10:52:33,219 | INFO     | chi2: 0.8740134519911498
[2025-04-29 06:52:50] 2025-04-29 10:52:33,219 | INFO     | current chi2=0.8740134519911498 (change=41.69533593298924 %)
[2025-04-29 06:52:50] 2025-04-29 10:52:33,220 | INFO     | sum of square deviations: 56522347488.04596
[2025-04-29 06:52:50] 2025-04-29 10:52:33,231 | INFO     | sum of deviations: 45751805238.16046
[2025-04-29 06:52:50] 2025-04-29 10:52:33,231 | INFO     | mean x: 1745906586.1922398
[2025-04-29 06:52:50] 2025-04-29 10:52:33,231 | INFO     | mean y: 2560312.172839506
[2025-04-29 06:52:50] 2025-04-29 10:52:33,231 | INFO     | -- intersect: -1410657320.2402983
[2025-04-29 06:52:50] 2025-04-29 10:52:33,232 | INFO     | intersect: -1410657320.2402983
[2025-04-29 06:52:50] 2025-04-29 10:52:33,232 | INFO     | chi2: 0.8072007531675082
[2025-04-29 06:52:50] 2025-04-29 10:52:33,233 | INFO     | current chi2=0.8072007531675082 (change=7.644355893085058 %)
[2025-04-29 06:52:50] 2025-04-29 10:52:33,233 | INFO     | left removable region: 50
[2025-04-29 06:52:50] 2025-04-29 10:52:33,234 | INFO     | sum of square deviations: 47749023482.59692
[2025-04-29 06:52:50] 2025-04-29 10:52:33,242 | INFO     | sum of deviations: 60977386736.25371
[2025-04-29 06:52:50] 2025-04-29 10:52:33,242 | INFO     | mean x: 1745907165.7089553
[2025-04-29 06:52:50] 2025-04-29 10:52:33,242 | INFO     | mean y: 2566588.48880597
[2025-04-29 06:52:50] 2025-04-29 10:52:33,242 | INFO     | -- intersect: -2227025739.9874682
[2025-04-29 06:52:50] 2025-04-29 10:52:33,243 | INFO     | intersect: -2227025739.9874682
[2025-04-29 06:52:50] 2025-04-29 10:52:33,245 | INFO     | chi2: 0.002434904122225766
[2025-04-29 06:52:50] 2025-04-29 10:52:33,245 | INFO     | -- intersect: -2227025739.9874682
[2025-04-29 06:52:50] 2025-04-29 10:52:33,245 | INFO     | current memory leak: 1.28 B/s (using 536 data points, chi2=0.00)
[2025-04-29 06:52:50] 2025-04-29 10:52:33,246 | INFO     | ..............................
[2025-04-29 06:52:50] 2025-04-29 10:52:33,246 | INFO     | . Timing measurements:
[2025-04-29 06:52:50] 2025-04-29 10:52:33,246 | INFO     | . get job = 0 s
[2025-04-29 06:52:50] 2025-04-29 10:52:33,247 | INFO     | . initial setup = 3 s
[2025-04-29 06:52:50] 2025-04-29 10:52:33,247 | INFO     | . payload setup = 50 s
[2025-04-29 06:52:50] 2025-04-29 10:52:33,247 | INFO     | . stage-in = 0 s
[2025-04-29 06:52:50] 2025-04-29 10:52:33,247 | INFO     | . payload execution = 36160 s
[2025-04-29 06:52:50] 2025-04-29 10:52:33,247 | INFO     | . stage-out = 4 s
[2025-04-29 06:52:50] 2025-04-29 10:52:33,247 | INFO     | . log creation = 0 s
[2025-04-29 06:52:50] 2025-04-29 10:52:33,247 | INFO     | ..............................
[2025-04-29 06:52:50] 2025-04-29 10:52:33,401 | INFO     | 
[2025-04-29 06:52:50] 2025-04-29 10:52:33,401 | INFO     | job summary report
[2025-04-29 06:52:50] 2025-04-29 10:52:33,401 | INFO     | --------------------------------------------------
[2025-04-29 06:52:50] 2025-04-29 10:52:33,401 | INFO     | PanDA job id: 6608807231
[2025-04-29 06:52:50] 2025-04-29 10:52:33,401 | INFO     | task id: 44075483
[2025-04-29 06:52:50] 2025-04-29 10:52:33,402 | INFO     | errors: (none)
[2025-04-29 06:52:50] 2025-04-29 10:52:33,402 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 06:52:50] 2025-04-29 10:52:33,402 | INFO     | pilot state: finished 
[2025-04-29 06:52:50] 2025-04-29 10:52:33,402 | INFO     | transexitcode: 0
[2025-04-29 06:52:50] 2025-04-29 10:52:33,402 | INFO     | exeerrorcode: 0
[2025-04-29 06:52:50] 2025-04-29 10:52:33,402 | INFO     | exeerrordiag: 
[2025-04-29 06:52:50] 2025-04-29 10:52:33,402 | INFO     | exitcode: 0
[2025-04-29 06:52:50] 2025-04-29 10:52:33,402 | INFO     | exitmsg: OK
[2025-04-29 06:52:50] 2025-04-29 10:52:33,402 | INFO     | cpuconsumptiontime: 56299 s
[2025-04-29 06:52:50] 2025-04-29 10:52:33,402 | INFO     | nevents: 400
[2025-04-29 06:52:50] 2025-04-29 10:52:33,403 | INFO     | neventsw: 0
[2025-04-29 06:52:50] 2025-04-29 10:52:33,403 | INFO     | pid: 5207
[2025-04-29 06:52:50] 2025-04-29 10:52:33,403 | INFO     | pgrp: 5207
[2025-04-29 06:52:50] 2025-04-29 10:52:33,403 | INFO     | corecount: 10
[2025-04-29 06:52:50] 2025-04-29 10:52:33,403 | INFO     | event service: False
[2025-04-29 06:52:50] 2025-04-29 10:52:33,403 | INFO     | sizes: {0: 2393539, 1: 2393623, 2: 2393822, 13: 2393822, 24: 2393878, 27: 2394112, 34: 2394268, 36215: 2433831, 36220: 2442772, 36224: 2442828, 36281: 2442998}
[2025-04-29 06:52:50] 2025-04-29 10:52:33,403 | INFO     | --------------------------------------------------
[2025-04-29 06:52:50] 2025-04-29 10:52:33,403 | INFO     | 
[2025-04-29 06:52:50] 2025-04-29 10:52:33,404 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-29 06:52:50] 2025-04-29 10:52:33,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,466 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 06:52:50] 2025-04-29 10:52:33,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 06:52:50] 2025-04-29 10:52:33,467 | INFO     | job 6608807231 has completed (purged errors)
[2025-04-29 06:52:50] 2025-04-29 10:52:33,467 | INFO     | overall cleanup function is called
[2025-04-29 06:52:50] 2025-04-29 10:52:34,474 | INFO     | --- collectZombieJob: --- 10, [5207]
[2025-04-29 06:52:50] 2025-04-29 10:52:34,475 | INFO     | zombie collector waiting for pid 5207
[2025-04-29 06:52:50] 2025-04-29 10:52:34,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 06:52:50] 2025-04-29 10:52:34,475 | INFO     | collected zombie processes
[2025-04-29 06:52:50] 2025-04-29 10:52:34,475 | INFO     | will attempt to kill all subprocesses of pid=5207
[2025-04-29 06:52:50] 2025-04-29 10:52:35,033 | INFO     | process IDs to be killed: [5207] (in reverse order)
[2025-04-29 06:52:50] 2025-04-29 10:52:35,842 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 06:52:50] 2025-04-29 10:52:35,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 06:52:50] 2025-04-29 10:52:35,870 | INFO     | did not find any defunct processes belonging to 5207
[2025-04-29 06:52:50] 2025-04-29 10:52:35,886 | INFO     | did not find any defunct processes belonging to 5207
[2025-04-29 06:52:50] 2025-04-29 10:52:35,895 | INFO     | ready for new job
[2025-04-29 06:52:50] 2025-04-29 10:52:35,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 06:52:50] 2025-04-29 10:52:35,897 | INFO     | **************************************
[2025-04-29 06:52:50] 2025-04-29 10:52:35,897 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 06:52:50] 2025-04-29 10:52:35,897 | INFO     | **************************************
[2025-04-29 06:52:50] 2025-04-29 10:52:35,897 | INFO     | 
[2025-04-29 06:52:50] 2025-04-29 10:52:35,908 | INFO     | architecture information:
[2025-04-29 06:52:50] 2025-04-29 10:52:35,919 | INFO     | executing command: cat /etc/os-release
[2025-04-29 06:52:50] 2025-04-29 10:52:36,066 | INFO     | cat /etc/os-release:
[2025-04-29 06:52:50] NAME="CentOS Linux"
[2025-04-29 06:52:50] VERSION="7 (Core)"
[2025-04-29 06:52:50] ID="centos"
[2025-04-29 06:52:50] ID_LIKE="rhel fedora"
[2025-04-29 06:52:50] VERSION_ID="7"
[2025-04-29 06:52:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 06:52:50] ANSI_COLOR="0;31"
[2025-04-29 06:52:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 06:52:50] HOME_URL="https://www.centos.org/"
[2025-04-29 06:52:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 06:52:50] 
[2025-04-29 06:52:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 06:52:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 06:52:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 06:52:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 06:52:50] 
[2025-04-29 06:52:50] 2025-04-29 10:52:36,066 | INFO     | **************************************
[2025-04-29 06:52:50] 2025-04-29 10:52:36,568 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-29 06:52:50] 2025-04-29 10:52:36,704 | INFO     | sufficient remaining disk space (56997445632 B)
[2025-04-29 06:52:50] 2025-04-29 10:52:36,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 06:52:50] 2025-04-29 10:52:36,705 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 06:52:50] 2025-04-29 10:52:36,705 | INFO     | update_server=False
[2025-04-29 06:52:50] 2025-04-29 10:52:36,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 06:52:50] 2025-04-29 10:52:36,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 06:52:50] 2025-04-29 10:52:36,706 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-29 06:52:50] 2025-04-29 10:52:36,707 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 06:52:50] 2025-04-29 10:52:36,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 06:52:50] 2025-04-29 10:52:36,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 06:52:50] 2025-04-29 10:52:36,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 06:52:50] 2025-04-29 10:52:36,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 06:52:50] 2025-04-29 10:52:36,773 | INFO     | aborting loop
[2025-04-29 06:52:50] 2025-04-29 10:52:36,939 | INFO     | all data control threads have been joined
[2025-04-29 06:52:50] 2025-04-29 10:52:37,057 | INFO     | all job control threads have been joined
[2025-04-29 06:52:50] 2025-04-29 10:52:37,711 | INFO     | [job] retrieve thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:37,751 | INFO     | [payload] failed_post thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:37,778 | INFO     | [job] job monitor thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:37,842 | INFO     | [job] validate thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:37,864 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:37,873 | INFO     | [data] copytool_in thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:37,905 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:37,944 | INFO     | [data] control thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:38,042 | INFO     | all payload control threads have been joined
[2025-04-29 06:52:50] 2025-04-29 10:52:38,063 | INFO     | [job] control thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:38,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:38,412 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:38,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 06:52:50] 2025-04-29 10:52:38,612 | INFO     | [payload] validate_post thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:38,712 | INFO     | [data] copytool_out thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:39,048 | INFO     | [payload] control thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:39,426 | INFO     | [job] queue monitor thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:40,715 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 06:52:50] 2025-04-29 10:52:41,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139842348705600)>', '<ExcThread(monitor, started 139841769559808)>']
[2025-04-29 06:52:50] 2025-04-29 10:52:41,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 06:52:50] 2025-04-29 10:52:41,731 | INFO     | [monitor] control thread has ended
[2025-04-29 06:52:50] 2025-04-29 10:52:46,419 | INFO     | all workflow threads have been joined
[2025-04-29 06:52:50] 2025-04-29 10:52:46,422 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 06:52:50] 2025-04-29 10:52:46,435 | INFO     | traces error code: 0
[2025-04-29 06:52:50] 2025-04-29 10:52:46,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 06:52:50] 2025-04-29 10:52:47,354 [wrapper] ==== pilot stdout END ====
[2025-04-29 06:52:50] 2025-04-29 10:52:47,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 06:52:50] 2025-04-29 10:52:47,450 [wrapper] pilotpid: 28533
[2025-04-29 06:52:50] 2025-04-29 10:52:47,492 [wrapper] Pilot exit status: 0
[2025-04-29 06:52:50] 2025-04-29 10:52:47,704 [wrapper] pandaids: 6608807231 6608807231
[2025-04-29 06:52:50] 2025-04-29 10:52:48,255 [wrapper] cleanup supervisor_pilot 38619 28535
[2025-04-29 06:52:50] 2025-04-29 10:52:48,288 [wrapper] Test setup, not cleaning
[2025-04-29 06:52:50] 2025-04-29 10:52:48,326 [wrapper] apfmon messages muted
[2025-04-29 06:52:50] 2025-04-29 10:52:48,371 [wrapper] ==== wrapper stdout END ====
[2025-04-29 06:52:50] 2025-04-29 10:52:48,416 [wrapper] ==== wrapper stderr END ====
[2025-04-29 06:52:50]  *** Error codes and diagnostics ***
[2025-04-29 06:52:50]     "exeErrorCode": 0,
[2025-04-29 06:52:50]     "exeErrorDiag": "",
[2025-04-29 06:52:50]     "pilotErrorCode": 0,
[2025-04-29 06:52:50]     "pilotErrorDiag": "",
[2025-04-29 06:52:50]  *** Listing of results directory ***
[2025-04-29 06:52:50] total 651004
[2025-04-29 06:52:50] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas    495897 Apr 20 04:22 pilot3.tar.gz
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas      5111 Apr 20 04:35 queuedata.json
[2025-04-29 06:52:50] -rwx------ 1 boincer umatlas     37140 Apr 20 04:36 runpilot2-wrapper.sh
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas       100 Apr 28 14:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 06:52:50] -rwxr-xr-x 1 boincer umatlas      7986 Apr 28 14:53 run_atlas
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas       105 Apr 28 14:53 job.xml
[2025-04-29 06:52:50] -rw-r--r-- 3 boincer umatlas 226994696 Apr 28 14:53 EVNT.44075481._003367.pool.root.1
[2025-04-29 06:52:50] -rw-r--r-- 3 boincer umatlas 226994696 Apr 28 14:53 ATLAS.root_0
[2025-04-29 06:52:50] -rw-r--r-- 2 boincer umatlas     17569 Apr 28 14:53 start_atlas.sh
[2025-04-29 06:52:50] drwxrwx--x 2 boincer umatlas      4096 Apr 28 14:53 shared
[2025-04-29 06:52:50] -rw-r--r-- 2 boincer umatlas    508895 Apr 28 14:53 input.tar.gz
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas         0 Apr 28 14:53 boinc_lockfile
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas      2579 Apr 28 20:46 pandaJob.out
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas       467 Apr 28 20:46 setup.sh.local
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas    995057 Apr 28 20:46 agis_schedconf.cvmfs.json
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas      6228 Apr 29 06:46 init_data.xml
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas 202114134 Apr 29 06:50 HITS.44075483._095202.pool.root.1
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas       531 Apr 29 06:50 boinc_task_state.xml
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas      1061 Apr 29 06:51 memory_monitor_summary.json
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas   1596659 Apr 29 06:51 agis_ddmendpoints.agis.ALL.json
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas    606864 Apr 29 06:51 log.44075483._095202.job.log.tgz.1
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas        96 Apr 29 06:52 pilot_heartbeat.json
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas      7755 Apr 29 06:52 heartbeat.json
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas      8192 Apr 29 06:52 boinc_mmap_file
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas        28 Apr 29 06:52 wrapper_checkpoint.txt
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas      4476 Apr 29 06:52 pilotlog.txt
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas   2734840 Apr 29 06:52 log.44075483._095202.job.log.1
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas       357 Apr 29 06:52 output.list
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas       620 Apr 29 06:52 runtime_log
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas   3358720 Apr 29 06:52 result.tar.gz
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas       788 Apr 29 06:52 U04LDmXLfQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmp6jLDmGYVtin.diag
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas     11501 Apr 29 06:52 runtime_log.err
[2025-04-29 06:52:50] -rw-r--r-- 1 boincer umatlas     23044 Apr 29 06:52 stderr.txt
[2025-04-29 06:52:50] HITS file was successfully produced:
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas 202114134 Apr 29 06:50 shared/HITS.pool.root.1
[2025-04-29 06:52:50]  *** Contents of shared directory: ***
[2025-04-29 06:52:50] total 422860
[2025-04-29 06:52:50] -rw-r--r-- 3 boincer umatlas 226994696 Apr 28 14:53 ATLAS.root_0
[2025-04-29 06:52:50] -rw-r--r-- 2 boincer umatlas     17569 Apr 28 14:53 start_atlas.sh
[2025-04-29 06:52:50] -rw-r--r-- 2 boincer umatlas    508895 Apr 28 14:53 input.tar.gz
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas 202114134 Apr 29 06:50 HITS.pool.root.1
[2025-04-29 06:52:50] -rw------- 1 boincer umatlas   3358720 Apr 29 06:52 result.tar.gz
06:52:51 (19240): run_atlas exited; CPU time 57137.439591
06:52:51 (19240): called boinc_finish(0)

</stderr_txt>
]]>

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