Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
21:20:42 (3747989): wrapper (7.7.26015): starting
21:20:42 (3747989): wrapper: running run_atlas (--nthreads 4)
[2025-04-28 21:20:42] Arguments: --nthreads 4
[2025-04-28 21:20:42] Threads: 4
[2025-04-28 21:20:42] Checking for CVMFS
[2025-04-28 21:20:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 21:20:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 21:20:42] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 21:20:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 21:20:42] 2.12.7.0 90806 4798 69668 145384 0 56 7231239 10240001 1820 130560 0 9738062 99.996 1769844 320 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-04-28 21:20:42] CVMFS is ok
[2025-04-28 21:20:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 21:20:42] Checking for apptainer binary...
[2025-04-28 21:20:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 21:20:42] Running /usr/bin/apptainer --version
[2025-04-28 21:20:42] apptainer version 1.3.4
[2025-04-28 21:20:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 21:20:42] woolyvlneu
[2025-04-28 21:20:42] apptainer works
[2025-04-28 21:20:42] Set ATHENA_PROC_NUMBER=4
[2025-04-28 21:20:42] Set ATHENA_CORE_NUMBER=4
[2025-04-28 21:20:42] Starting ATLAS job with PandaID=6619032392
[2025-04-28 21:20:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 22:58:57]  *** The last 200 lines of the pilot log: ***
[2025-04-28 22:58:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-28 22:58:57]  replicas=None
[2025-04-28 22:58:57]  scope=mc23_13p6TeV
[2025-04-28 22:58:57]  status=None
[2025-04-28 22:58:57]  status_code=0
[2025-04-28 22:58:57]  storage_token=
[2025-04-28 22:58:57]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6619032392/log.44292257._032888.job.log.tgz.1
[2025-04-28 22:58:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/d4/log.44292257._032888.job.log.tgz.1
[2025-04-28 22:58:57]  workdir=None
[2025-04-28 22:58:57] ]
[2025-04-28 22:58:57] 2025-04-28 20:58:26,541 | INFO     | transferring file log.44292257._032888.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6619032392/log.44292257._032888.job.log.tgz.1 to /var/li
[2025-04-28 22:58:57] 2025-04-28 20:58:26,541 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6619032392/log.44292257._032888.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-04-28 22:58:57] 2025-04-28 20:58:26,555 | INFO     | adding to output.list: log.44292257._032888.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/d4/log.44292257._032888.job.log.tg
[2025-04-28 22:58:57] 2025-04-28 20:58:26,556 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-28 22:58:57] 2025-04-28 20:58:26,556 | INFO     | summary of transferred files:
[2025-04-28 22:58:57] 2025-04-28 20:58:26,556 | INFO     |  -- lfn=log.44292257._032888.job.log.tgz.1, status_code=0, status=transferred
[2025-04-28 22:58:57] 2025-04-28 20:58:26,556 | INFO     | stage-out finished correctly
[2025-04-28 22:58:57] 2025-04-28 20:58:26,937 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-28 22:58:57] 2025-04-28 20:58:27,819 | INFO     | PID=3751726 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-28 22:58:57] 2025-04-28 20:58:27,819 | INFO     | .. there are 3 such processes running
[2025-04-28 22:58:57] 2025-04-28 20:58:28,321 | INFO     | monitor loop #447: job 0:6619032392 is in state 'finished'
[2025-04-28 22:58:57] 2025-04-28 20:58:28,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 22:58:57] 2025-04-28 20:58:28,728 | INFO     | job 6619032392 has state=finished
[2025-04-28 22:58:57] 2025-04-28 20:58:28,729 | INFO     | preparing for final server update for job 6619032392 in state='finished'
[2025-04-28 22:58:57] 2025-04-28 20:58:30,825 | INFO     | monitor loop #448: job 0:6619032392 is in state 'finished'
[2025-04-28 22:58:57] 2025-04-28 20:58:30,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 22:58:57] 2025-04-28 20:58:33,329 | INFO     | monitor loop #449: job 0:6619032392 is in state 'finished'
[2025-04-28 22:58:57] 2025-04-28 20:58:33,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 22:58:57] 2025-04-28 20:58:33,715 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-28 22:58:57] 2025-04-28 20:58:33,715 | INFO     | this job has now completed (state=finished)
[2025-04-28 22:58:57] 2025-04-28 20:58:33,715 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-28 22:58:57] 2025-04-28 20:58:33,715 | INFO     | log transfer has been attempted: DONE
[2025-04-28 22:58:57] 2025-04-28 20:58:33,715 | INFO     | job 6619032392 has finished - writing final server update
[2025-04-28 22:58:57] 2025-04-28 20:58:33,715 | INFO     | total number of processed events: 400 (read)
[2025-04-28 22:58:57] 2025-04-28 20:58:33,716 | INFO     | executing command: lscpu
[2025-04-28 22:58:57] 2025-04-28 20:58:33,735 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-28 22:58:57] 2025-04-28 20:58:35,833 | INFO     | monitor loop #450: job 0:6619032392 is in state 'finished'
[2025-04-28 22:58:57] 2025-04-28 20:58:35,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 22:58:57] 2025-04-28 20:58:38,211 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-28 22:58:57] 2025-04-28 20:58:38,212 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6619032392/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 22:58:57] 2025-04-28 20:58:38,212 | INFO     | extracted standard info from prmon json
[2025-04-28 22:58:57] 2025-04-28 20:58:38,212 | INFO     | extracted standard memory fields from prmon json
[2025-04-28 22:58:57] 2025-04-28 20:58:38,212 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-28 22:58:57] 2025-04-28 20:58:38,212 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-28 22:58:57] 2025-04-28 20:58:38,212 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-28 22:58:57] 2025-04-28 20:58:38,213 | INFO     | fitting pss+swap vs Time
[2025-04-28 22:58:57] 2025-04-28 20:58:38,213 | INFO     | sum of square deviations: 218571540.0
[2025-04-28 22:58:57] 2025-04-28 20:58:38,214 | INFO     | sum of deviations: -24044752775.0
[2025-04-28 22:58:57] 2025-04-28 20:58:38,214 | INFO     | mean x: 1745871059.0
[2025-04-28 22:58:57] 2025-04-28 20:58:38,214 | INFO     | mean y: 2548197.7528089886
[2025-04-28 22:58:57] 2025-04-28 20:58:38,214 | INFO     | -- intersect: 192063408411.67838
[2025-04-28 22:58:57] 2025-04-28 20:58:38,214 | INFO     | intersect: 192063408411.67838
[2025-04-28 22:58:57] 2025-04-28 20:58:38,214 | INFO     | chi2: 0.1542029805188882
[2025-04-28 22:58:57] 2025-04-28 20:58:38,214 | INFO     | -- intersect: 192063408411.67838
[2025-04-28 22:58:57] 2025-04-28 20:58:38,214 | INFO     | current memory leak: -110.01 B/s (using 89 data points, chi2=0.15)
[2025-04-28 22:58:57] 2025-04-28 20:58:38,215 | INFO     | ..............................
[2025-04-28 22:58:57] 2025-04-28 20:58:38,215 | INFO     | . Timing measurements:
[2025-04-28 22:58:57] 2025-04-28 20:58:38,215 | INFO     | . get job = 0 s
[2025-04-28 22:58:57] 2025-04-28 20:58:38,215 | INFO     | . initial setup = 1 s
[2025-04-28 22:58:57] 2025-04-28 20:58:38,215 | INFO     | . payload setup = 3 s
[2025-04-28 22:58:57] 2025-04-28 20:58:38,215 | INFO     | . stage-in = 0 s
[2025-04-28 22:58:57] 2025-04-28 20:58:38,215 | INFO     | . payload execution = 5835 s
[2025-04-28 22:58:57] 2025-04-28 20:58:38,215 | INFO     | . stage-out = 0 s
[2025-04-28 22:58:57] 2025-04-28 20:58:38,215 | INFO     | . log creation = 0 s
[2025-04-28 22:58:57] 2025-04-28 20:58:38,215 | INFO     | ..............................
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | 
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | job summary report
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | --------------------------------------------------
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | PanDA job id: 6619032392
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | task id: 44292257
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | errors: (none)
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | pilot state: finished 
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | transexitcode: 0
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | exeerrorcode: 0
[2025-04-28 22:58:57] 2025-04-28 20:58:38,249 | INFO     | exeerrordiag: 
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | exitcode: 0
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | exitmsg: OK
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | cpuconsumptiontime: 22253 s
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | nevents: 400
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | neventsw: 0
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | pid: 3758297
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | pgrp: 3758297
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | corecount: 4
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | event service: False
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | sizes: {0: 2393696, 3: 2393902, 11: 2393930, 5842: 2420621, 5843: 2429590, 5844: 2429646, 5855: 2429944}
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | --------------------------------------------------
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | 
[2025-04-28 22:58:57] 2025-04-28 20:58:38,250 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,264 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 22:58:57] 2025-04-28 20:58:38,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 22:58:57] 2025-04-28 20:58:38,264 | INFO     | job 6619032392 has completed (purged errors)
[2025-04-28 22:58:57] 2025-04-28 20:58:38,264 | INFO     | overall cleanup function is called
[2025-04-28 22:58:57] 2025-04-28 20:58:39,271 | INFO     | --- collectZombieJob: --- 10, [3758297]
[2025-04-28 22:58:57] 2025-04-28 20:58:39,271 | INFO     | zombie collector waiting for pid 3758297
[2025-04-28 22:58:57] 2025-04-28 20:58:39,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 22:58:57] 2025-04-28 20:58:39,271 | INFO     | collected zombie processes
[2025-04-28 22:58:57] 2025-04-28 20:58:39,271 | INFO     | will attempt to kill all subprocesses of pid=3758297
[2025-04-28 22:58:57] 2025-04-28 20:58:39,369 | INFO     | process IDs to be killed: [3758297] (in reverse order)
[2025-04-28 22:58:57] 2025-04-28 20:58:39,407 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 22:58:57] 2025-04-28 20:58:39,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 22:58:57] 2025-04-28 20:58:39,409 | INFO     | did not find any defunct processes belonging to 3758297
[2025-04-28 22:58:57] 2025-04-28 20:58:39,411 | INFO     | did not find any defunct processes belonging to 3758297
[2025-04-28 22:58:57] 2025-04-28 20:58:39,411 | INFO     | ready for new job
[2025-04-28 22:58:57] 2025-04-28 20:58:39,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 22:58:57] 2025-04-28 20:58:39,412 | INFO     | **************************************
[2025-04-28 22:58:57] 2025-04-28 20:58:39,412 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 22:58:57] 2025-04-28 20:58:39,413 | INFO     | **************************************
[2025-04-28 22:58:57] 2025-04-28 20:58:39,413 | INFO     | 
[2025-04-28 22:58:57] 2025-04-28 20:58:39,413 | INFO     | pilot is running in a VM
[2025-04-28 22:58:57] 2025-04-28 20:58:39,413 | INFO     | architecture information:
[2025-04-28 22:58:57] 2025-04-28 20:58:39,413 | INFO     | executing command: cat /etc/os-release
[2025-04-28 22:58:57] 2025-04-28 20:58:39,423 | INFO     | cat /etc/os-release:
[2025-04-28 22:58:57] NAME="CentOS Linux"
[2025-04-28 22:58:57] VERSION="7 (Core)"
[2025-04-28 22:58:57] ID="centos"
[2025-04-28 22:58:57] ID_LIKE="rhel fedora"
[2025-04-28 22:58:57] VERSION_ID="7"
[2025-04-28 22:58:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 22:58:57] ANSI_COLOR="0;31"
[2025-04-28 22:58:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 22:58:57] HOME_URL="https://www.centos.org/"
[2025-04-28 22:58:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 22:58:57] 
[2025-04-28 22:58:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 22:58:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 22:58:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 22:58:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 22:58:57] 
[2025-04-28 22:58:57] 2025-04-28 20:58:39,424 | INFO     | **************************************
[2025-04-28 22:58:57] 2025-04-28 20:58:39,926 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-04-28 22:58:57] 2025-04-28 20:58:39,936 | INFO     | sufficient remaining disk space (24888999936 B)
[2025-04-28 22:58:57] 2025-04-28 20:58:39,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 22:58:57] 2025-04-28 20:58:39,936 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 22:58:57] 2025-04-28 20:58:39,936 | INFO     | update_server=False
[2025-04-28 22:58:57] 2025-04-28 20:58:39,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 22:58:57] 2025-04-28 20:58:39,936 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-28 22:58:57] 2025-04-28 20:58:39,937 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 22:58:57] 2025-04-28 20:58:39,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 22:58:57] 2025-04-28 20:58:39,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 22:58:57] 2025-04-28 20:58:39,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 22:58:57] 2025-04-28 20:58:39,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 22:58:57] 2025-04-28 20:58:39,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 22:58:57] 2025-04-28 20:58:39,938 | INFO     | aborting loop
[2025-04-28 22:58:57] 2025-04-28 20:58:40,141 | INFO     | all data control threads have been joined
[2025-04-28 22:58:57] 2025-04-28 20:58:40,443 | INFO     | all payload control threads have been joined
[2025-04-28 22:58:57] 2025-04-28 20:58:40,659 | INFO     | all job control threads have been joined
[2025-04-28 22:58:57] 2025-04-28 20:58:40,942 | INFO     | [job] retrieve thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:40,942 | INFO     | [job] queue monitor thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:40,943 | INFO     | [job] job monitor thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:41,141 | INFO     | [data] control thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:41,247 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:41,346 | INFO     | [payload] failed_post thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:41,449 | INFO     | [payload] control thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:41,662 | INFO     | [job] control thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:41,944 | INFO     | [data] copytool_out thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:41,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 22:58:57] 2025-04-28 20:58:42,037 | INFO     | [job] validate thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:42,037 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:42,045 | INFO     | [data] copytool_in thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:42,284 | INFO     | [payload] validate_post thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:42,288 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:45,993 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:50,260 | INFO     | job.realtimelogging is not enabled
[2025-04-28 22:58:57] 2025-04-28 20:58:51,265 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 22:58:57] 2025-04-28 20:58:52,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135676917991232)>', '<ExcThread(monitor, started 135676439824128)>']
[2025-04-28 22:58:57] 2025-04-28 20:58:52,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 22:58:57] 2025-04-28 20:58:52,995 | INFO     | [monitor] control thread has ended
[2025-04-28 22:58:57] 2025-04-28 20:58:57,745 | INFO     | all workflow threads have been joined
[2025-04-28 22:58:57] 2025-04-28 20:58:57,745 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 22:58:57] 2025-04-28 20:58:57,746 | INFO     | traces error code: 0
[2025-04-28 22:58:57] 2025-04-28 20:58:57,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 22:58:57] 2025-04-28 20:58:57,806 [wrapper] ==== pilot stdout END ====
[2025-04-28 22:58:57] 2025-04-28 20:58:57,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 22:58:57] 2025-04-28 20:58:57,810 [wrapper] pilotpid: 3751726
[2025-04-28 22:58:57] 2025-04-28 20:58:57,813 [wrapper] Pilot exit status: 0
[2025-04-28 22:58:57] 2025-04-28 20:58:57,821 [wrapper] pandaids: 6619032392
[2025-04-28 22:58:57] 2025-04-28 20:58:57,848 [wrapper] cleanup supervisor_pilot 3820444 3751727
[2025-04-28 22:58:57] 2025-04-28 20:58:57,850 [wrapper] Test setup, not cleaning
[2025-04-28 22:58:57] 2025-04-28 20:58:57,853 [wrapper] apfmon messages muted
[2025-04-28 22:58:57] 2025-04-28 20:58:57,855 [wrapper] ==== wrapper stdout END ====
[2025-04-28 22:58:57] 2025-04-28 20:58:57,857 [wrapper] ==== wrapper stderr END ====
[2025-04-28 22:58:57]  *** Error codes and diagnostics ***
[2025-04-28 22:58:57]     "exeErrorCode": 0,
[2025-04-28 22:58:57]     "exeErrorDiag": "",
[2025-04-28 22:58:57]     "pilotErrorCode": 0,
[2025-04-28 22:58:57]     "pilotErrorDiag": "",
[2025-04-28 22:58:57]  *** Listing of results directory ***
[2025-04-28 22:58:57] insgesamt 416952
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc    495897 Apr 28 15:31 pilot3.tar.gz
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc      5111 Apr 28 15:34 queuedata.json
[2025-04-28 22:58:57] -rwx------ 1 yeti boinc     37140 Apr 28 15:35 runpilot2-wrapper.sh
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc       100 Apr 28 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 22:58:57] -rwxr-xr-x 1 yeti boinc      7986 Apr 28 21:20 run_atlas
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc       105 Apr 28 21:20 job.xml
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc      6710 Apr 28 21:20 init_data.xml
[2025-04-28 22:58:57] -rw-r--r-- 2 yeti boinc 223665738 Apr 28 21:20 EVNT.44292255._003946.pool.root.1
[2025-04-28 22:58:57] -rw-r--r-- 2 yeti boinc     17569 Apr 28 21:20 start_atlas.sh
[2025-04-28 22:58:57] drwxrwx--x 2 yeti boinc      4096 Apr 28 21:20 shared
[2025-04-28 22:58:57] -rw-r--r-- 2 yeti boinc    508885 Apr 28 21:20 input.tar.gz
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc         0 Apr 28 21:20 boinc_lockfile
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc      2551 Apr 28 21:20 pandaJob.out
[2025-04-28 22:58:57] -rw------- 1 yeti boinc       462 Apr 28 21:20 setup.sh.local
[2025-04-28 22:58:57] -rw------- 1 yeti boinc    995073 Apr 28 21:20 agis_schedconf.cvmfs.json
[2025-04-28 22:58:57] -rw------- 1 yeti boinc   1596659 Apr 28 21:20 agis_ddmendpoints.agis.ALL.json
[2025-04-28 22:58:57] drwx------ 4 yeti boinc      4096 Apr 28 21:20 pilot3
[2025-04-28 22:58:57] -rw------- 1 yeti boinc 197689305 Apr 28 22:58 HITS.44292257._032888.pool.root.1
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc       529 Apr 28 22:58 boinc_task_state.xml
[2025-04-28 22:58:57] -rw------- 1 yeti boinc      1019 Apr 28 22:58 memory_monitor_summary.json
[2025-04-28 22:58:57] -rw------- 1 yeti boinc    262175 Apr 28 22:58 log.44292257._032888.job.log.tgz.1
[2025-04-28 22:58:57] -rw------- 1 yeti boinc        95 Apr 28 22:58 pilot_heartbeat.json
[2025-04-28 22:58:57] -rw------- 1 yeti boinc      7659 Apr 28 22:58 heartbeat.json
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc      8192 Apr 28 22:58 boinc_mmap_file
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc        27 Apr 28 22:58 wrapper_checkpoint.txt
[2025-04-28 22:58:57] -rw------- 1 yeti boinc      4624 Apr 28 22:58 pilotlog.txt
[2025-04-28 22:58:57] -rw------- 1 yeti boinc    616529 Apr 28 22:58 log.44292257._032888.job.log.1
[2025-04-28 22:58:57] -rw------- 1 yeti boinc       357 Apr 28 22:58 output.list
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc       620 Apr 28 22:58 runtime_log
[2025-04-28 22:58:57] -rw------- 1 yeti boinc    901120 Apr 28 22:58 result.tar.gz
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc     11623 Apr 28 22:58 runtime_log.err
[2025-04-28 22:58:57] -rw------- 1 yeti boinc       641 Apr 28 22:58 ogvNDmPpdT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm9rCLDmavB0fm.diag
[2025-04-28 22:58:57] -rw-r--r-- 1 yeti boinc     21603 Apr 28 22:58 stderr.txt
[2025-04-28 22:58:57] HITS file was successfully produced:
[2025-04-28 22:58:57] -rw------- 1 yeti boinc 197689305 Apr 28 22:58 shared/HITS.pool.root.1
[2025-04-28 22:58:57]  *** Contents of shared directory: ***
[2025-04-28 22:58:57] insgesamt 412888
[2025-04-28 22:58:57] -rw-r--r-- 2 yeti boinc 223665738 Apr 28 21:20 ATLAS.root_0
[2025-04-28 22:58:57] -rw-r--r-- 2 yeti boinc     17569 Apr 28 21:20 start_atlas.sh
[2025-04-28 22:58:57] -rw-r--r-- 2 yeti boinc    508885 Apr 28 21:20 input.tar.gz
[2025-04-28 22:58:57] -rw------- 1 yeti boinc 197689305 Apr 28 22:58 HITS.pool.root.1
[2025-04-28 22:58:57] -rw------- 1 yeti boinc    901120 Apr 28 22:58 result.tar.gz
22:58:59 (3747989): run_atlas exited; CPU time 22289.294219
22:58:59 (3747989): called boinc_finish(0)

</stderr_txt>
]]>

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