Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:11:58 (3777062): wrapper (7.7.26015): starting
22:11:58 (3777062): wrapper: running run_atlas (--nthreads 4)
[2025-04-28 22:11:58] Arguments: --nthreads 4
[2025-04-28 22:11:58] Threads: 4
[2025-04-28 22:11:58] Checking for CVMFS
[2025-04-28 22:11:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 22:11:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 22:11:58] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 22:11:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 22:11:59] 2.12.7.0 90806 4850 69860 145384 1 187 7231420 10240001 1820 130560 0 9814063 99.996 1769852 320 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-04-28 22:11:59] CVMFS is ok
[2025-04-28 22:11:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 22:11:59] Checking for apptainer binary...
[2025-04-28 22:11:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 22:11:59] Running /usr/bin/apptainer --version
[2025-04-28 22:11:59] apptainer version 1.3.4
[2025-04-28 22:11:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 22:11:59] woolyvlneu
[2025-04-28 22:11:59] apptainer works
[2025-04-28 22:11:59] Set ATHENA_PROC_NUMBER=4
[2025-04-28 22:11:59] Set ATHENA_CORE_NUMBER=4
[2025-04-28 22:11:59] Starting ATLAS job with PandaID=6618080820
[2025-04-28 22:11:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 23:54:05]  *** The last 200 lines of the pilot log: ***
[2025-04-28 23:54:05] 2025-04-28 21:53:45,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-28 23:54:05] 2025-04-28 21:53:45,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-28 23:54:05] 2025-04-28 21:53:45,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-28 23:54:05] 2025-04-28 21:53:45,779 | INFO     | fitting pss+swap vs Time
[2025-04-28 23:54:05] 2025-04-28 21:53:45,779 | INFO     | sum of square deviations: 310052325.0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | sum of deviations: 13837070572.500004
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | mean x: 1745874165.5
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | mean y: 2312688.89
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | -- intersect: -77912871590.82167
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | intersect: -77912871590.82167
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | chi2: 2.2328576614854425
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | sum of square deviations: 265828240.0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | sum of deviations: 13341794644.999996
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | mean x: 1745874013.0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | mean y: 2310979.6
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | -- intersect: -87622286608.25616
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | intersect: -87622286608.25616
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | chi2: 2.239377946844928
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | current chi2=2.239377946844928 (change=-0.29201527136968225 %)
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | right removable region: 94
[2025-04-28 23:54:05] 2025-04-28 21:53:45,780 | INFO     | sum of square deviations: 265828240.0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | sum of deviations: -6288401306.000001
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | mean x: 1745874318.0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | mean y: 2381211.1052631577
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | -- intersect: 41302576936.822975
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | intersect: 41302576936.822975
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | chi2: 0.013272032155318145
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | current chi2=0.013272032155318145 (change=99.4056033044897 %)
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | sum of square deviations: 226022842.5
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | sum of deviations: -5752190139.000001
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | mean x: 1745874470.5
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | mean y: 2379065.6666666665
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | -- intersect: 44434179860.942245
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | intersect: 44434179860.942245
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | chi2: 0.00873992395712875
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | current chi2=0.00873992395712875 (change=34.14780905555119 %)
[2025-04-28 23:54:05] 2025-04-28 21:53:45,781 | INFO     | sum of square deviations: 190403570.0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | sum of deviations: -4266092950.0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | mean x: 1745874623.0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | mean y: 2372686.223529412
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | -- intersect: 39119619388.92037
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | intersect: 39119619388.92037
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | chi2: 0.006758209814441234
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | current chi2=0.006758209814441234 (change=22.674272137930025 %)
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | left removable region: 30
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | sum of square deviations: 81266640.0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | sum of deviations: -1753050330.0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | mean x: 1745874897.5
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | mean y: 2362174.9375
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | -- intersect: 37663653021.97007
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | intersect: 37663653021.97007
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | chi2: 0.0019595203679361487
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | -- intersect: 37663653021.97007
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | current memory leak: -21.57 B/s (using 64 data points, chi2=0.00)
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | ..............................
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | . Timing measurements:
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | . get job = 0 s
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | . initial setup = 1 s
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | . payload setup = 3 s
[2025-04-28 23:54:05] 2025-04-28 21:53:45,782 | INFO     | . stage-in = 0 s
[2025-04-28 23:54:05] 2025-04-28 21:53:45,783 | INFO     | . payload execution = 6073 s
[2025-04-28 23:54:05] 2025-04-28 21:53:45,783 | INFO     | . stage-out = 0 s
[2025-04-28 23:54:05] 2025-04-28 21:53:45,783 | INFO     | . log creation = 0 s
[2025-04-28 23:54:05] 2025-04-28 21:53:45,783 | INFO     | ..............................
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | 
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | job summary report
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | --------------------------------------------------
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | PanDA job id: 6618080820
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | task id: 44292257
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | errors: (none)
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | pilot state: finished 
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | transexitcode: 0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | exeerrorcode: 0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | exeerrordiag: 
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | exitcode: 0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | exitmsg: OK
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | cpuconsumptiontime: 22961 s
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | nevents: 400
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | neventsw: 0
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | pid: 3787370
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | pgrp: 3787370
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | corecount: 4
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | event service: False
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | sizes: {0: 2393747, 2: 2393953, 10: 2393981, 6080: 2420728, 6082: 2429697, 6083: 2429753, 6087: 2430051}
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | --------------------------------------------------
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | 
[2025-04-28 23:54:05] 2025-04-28 21:53:45,818 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,833 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,834 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 23:54:05] 2025-04-28 21:53:45,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,834 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 23:54:05] 2025-04-28 21:53:45,834 | INFO     | job 6618080820 has completed (purged errors)
[2025-04-28 23:54:05] 2025-04-28 21:53:45,834 | INFO     | overall cleanup function is called
[2025-04-28 23:54:05] 2025-04-28 21:53:46,840 | INFO     | --- collectZombieJob: --- 10, [3787370]
[2025-04-28 23:54:05] 2025-04-28 21:53:46,840 | INFO     | zombie collector waiting for pid 3787370
[2025-04-28 23:54:05] 2025-04-28 21:53:46,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 23:54:05] 2025-04-28 21:53:46,840 | INFO     | collected zombie processes
[2025-04-28 23:54:05] 2025-04-28 21:53:46,840 | INFO     | will attempt to kill all subprocesses of pid=3787370
[2025-04-28 23:54:05] 2025-04-28 21:53:46,942 | INFO     | process IDs to be killed: [3787370] (in reverse order)
[2025-04-28 23:54:05] 2025-04-28 21:53:46,983 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 23:54:05] 2025-04-28 21:53:46,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 23:54:05] 2025-04-28 21:53:46,985 | INFO     | did not find any defunct processes belonging to 3787370
[2025-04-28 23:54:05] 2025-04-28 21:53:46,987 | INFO     | did not find any defunct processes belonging to 3787370
[2025-04-28 23:54:05] 2025-04-28 21:53:46,987 | INFO     | ready for new job
[2025-04-28 23:54:05] 2025-04-28 21:53:46,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 23:54:05] 2025-04-28 21:53:46,989 | INFO     | **************************************
[2025-04-28 23:54:05] 2025-04-28 21:53:46,989 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 23:54:05] 2025-04-28 21:53:46,989 | INFO     | **************************************
[2025-04-28 23:54:05] 2025-04-28 21:53:46,989 | INFO     | 
[2025-04-28 23:54:05] 2025-04-28 21:53:46,989 | INFO     | pilot is running in a VM
[2025-04-28 23:54:05] 2025-04-28 21:53:46,989 | INFO     | architecture information:
[2025-04-28 23:54:05] 2025-04-28 21:53:46,989 | INFO     | executing command: cat /etc/os-release
[2025-04-28 23:54:05] 2025-04-28 21:53:46,999 | INFO     | cat /etc/os-release:
[2025-04-28 23:54:05] NAME="CentOS Linux"
[2025-04-28 23:54:05] VERSION="7 (Core)"
[2025-04-28 23:54:05] ID="centos"
[2025-04-28 23:54:05] ID_LIKE="rhel fedora"
[2025-04-28 23:54:05] VERSION_ID="7"
[2025-04-28 23:54:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 23:54:05] ANSI_COLOR="0;31"
[2025-04-28 23:54:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 23:54:05] HOME_URL="https://www.centos.org/"
[2025-04-28 23:54:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 23:54:05] 
[2025-04-28 23:54:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 23:54:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 23:54:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 23:54:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 23:54:05] 
[2025-04-28 23:54:05] 2025-04-28 21:53:46,999 | INFO     | **************************************
[2025-04-28 23:54:05] 2025-04-28 21:53:47,502 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2025-04-28 23:54:05] 2025-04-28 21:53:47,513 | INFO     | sufficient remaining disk space (24606932992 B)
[2025-04-28 23:54:05] 2025-04-28 21:53:47,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 23:54:05] 2025-04-28 21:53:47,513 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 23:54:05] 2025-04-28 21:53:47,513 | INFO     | update_server=False
[2025-04-28 23:54:05] 2025-04-28 21:53:47,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 23:54:05] 2025-04-28 21:53:47,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 23:54:05] 2025-04-28 21:53:47,541 | INFO     | all payload control threads have been joined
[2025-04-28 23:54:05] 2025-04-28 21:53:47,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 23:54:05] 2025-04-28 21:53:47,615 | INFO     | aborting loop
[2025-04-28 23:54:05] 2025-04-28 21:53:47,846 | INFO     | all job control threads have been joined
[2025-04-28 23:54:05] 2025-04-28 21:53:48,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 23:54:05] 2025-04-28 21:53:48,516 | INFO     | [job] retrieve thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:48,519 | INFO     | [job] queue monitor thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:48,531 | INFO     | PID=3780798 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-28 23:54:05] 2025-04-28 21:53:48,531 | INFO     | .. there are 3 such processes running
[2025-04-28 23:54:05] 2025-04-28 21:53:48,531 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 23:54:05] 2025-04-28 21:53:48,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 23:54:05] 2025-04-28 21:53:48,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 23:54:05] 2025-04-28 21:53:48,547 | INFO     | [payload] control thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:48,559 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:48,584 | INFO     | all data control threads have been joined
[2025-04-28 23:54:05] 2025-04-28 21:53:48,620 | INFO     | [job] job monitor thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:48,703 | INFO     | [payload] failed_post thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:48,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 23:54:05] 2025-04-28 21:53:48,851 | INFO     | [job] control thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:49,136 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:49,590 | INFO     | [data] control thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:49,623 | INFO     | [data] copytool_in thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:49,776 | INFO     | [payload] validate_post thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:49,906 | INFO     | [job] validate thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:49,969 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:50,785 | INFO     | [data] copytool_out thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:52,071 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:53:58,267 | INFO     | job.realtimelogging is not enabled
[2025-04-28 23:54:05] 2025-04-28 21:53:59,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 23:54:05] 2025-04-28 21:54:00,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124739002120000)>', '<ExcThread(monitor, started 124738613544704)>']
[2025-04-28 23:54:05] 2025-04-28 21:54:01,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 23:54:05] 2025-04-28 21:54:01,601 | INFO     | [monitor] control thread has ended
[2025-04-28 23:54:05] 2025-04-28 21:54:05,641 | INFO     | all workflow threads have been joined
[2025-04-28 23:54:05] 2025-04-28 21:54:05,641 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 23:54:05] 2025-04-28 21:54:05,642 | INFO     | traces error code: 0
[2025-04-28 23:54:05] 2025-04-28 21:54:05,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 23:54:05] 2025-04-28 21:54:05,712 [wrapper] ==== pilot stdout END ====
[2025-04-28 23:54:05] 2025-04-28 21:54:05,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 23:54:05] 2025-04-28 21:54:05,716 [wrapper] pilotpid: 3780798
[2025-04-28 23:54:05] 2025-04-28 21:54:05,718 [wrapper] Pilot exit status: 0
[2025-04-28 23:54:05] 2025-04-28 21:54:05,727 [wrapper] pandaids: 6618080820
[2025-04-28 23:54:05] 2025-04-28 21:54:05,753 [wrapper] cleanup supervisor_pilot 3851601 3780799
[2025-04-28 23:54:05] 2025-04-28 21:54:05,755 [wrapper] Test setup, not cleaning
[2025-04-28 23:54:05] 2025-04-28 21:54:05,758 [wrapper] apfmon messages muted
[2025-04-28 23:54:05] 2025-04-28 21:54:05,760 [wrapper] ==== wrapper stdout END ====
[2025-04-28 23:54:05] 2025-04-28 21:54:05,762 [wrapper] ==== wrapper stderr END ====
[2025-04-28 23:54:05]  *** Error codes and diagnostics ***
[2025-04-28 23:54:05]     "exeErrorCode": 0,
[2025-04-28 23:54:05]     "exeErrorDiag": "",
[2025-04-28 23:54:05]     "pilotErrorCode": 0,
[2025-04-28 23:54:05]     "pilotErrorDiag": "",
[2025-04-28 23:54:05]  *** Listing of results directory ***
[2025-04-28 23:54:05] insgesamt 417160
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc    495897 Apr 28 05:22 pilot3.tar.gz
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc      5111 Apr 28 05:28 queuedata.json
[2025-04-28 23:54:05] -rwx------ 1 yeti boinc     37140 Apr 28 05:29 runpilot2-wrapper.sh
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc       100 Apr 28 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 23:54:05] -rwxr-xr-x 1 yeti boinc      7986 Apr 28 22:11 run_atlas
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc       105 Apr 28 22:11 job.xml
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc      6710 Apr 28 22:11 init_data.xml
[2025-04-28 23:54:05] -rw-r--r-- 2 yeti boinc 221228360 Apr 28 22:11 EVNT.44292255._003101.pool.root.1
[2025-04-28 23:54:05] -rw-r--r-- 2 yeti boinc     17569 Apr 28 22:11 start_atlas.sh
[2025-04-28 23:54:05] drwxrwx--x 2 yeti boinc      4096 Apr 28 22:11 shared
[2025-04-28 23:54:05] -rw-r--r-- 2 yeti boinc    508883 Apr 28 22:11 input.tar.gz
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc         0 Apr 28 22:11 boinc_lockfile
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc      2552 Apr 28 22:11 pandaJob.out
[2025-04-28 23:54:05] -rw------- 1 yeti boinc       462 Apr 28 22:11 setup.sh.local
[2025-04-28 23:54:05] -rw------- 1 yeti boinc    995073 Apr 28 22:12 agis_schedconf.cvmfs.json
[2025-04-28 23:54:05] -rw------- 1 yeti boinc   1596659 Apr 28 22:12 agis_ddmendpoints.agis.ALL.json
[2025-04-28 23:54:05] drwx------ 4 yeti boinc      4096 Apr 28 22:12 pilot3
[2025-04-28 23:54:05] -rw------- 1 yeti boinc        95 Apr 28 23:52 pilot_heartbeat.json
[2025-04-28 23:54:05] -rw------- 1 yeti boinc 200312238 Apr 28 23:53 HITS.44292257._027902.pool.root.1
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc       529 Apr 28 23:53 boinc_task_state.xml
[2025-04-28 23:54:05] -rw------- 1 yeti boinc      1018 Apr 28 23:53 memory_monitor_summary.json
[2025-04-28 23:54:05] -rw------- 1 yeti boinc    257588 Apr 28 23:53 log.44292257._027902.job.log.tgz.1
[2025-04-28 23:54:05] -rw------- 1 yeti boinc      7651 Apr 28 23:53 heartbeat.json
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc        27 Apr 28 23:54 wrapper_checkpoint.txt
[2025-04-28 23:54:05] -rw------- 1 yeti boinc      4895 Apr 28 23:54 pilotlog.txt
[2025-04-28 23:54:05] -rw------- 1 yeti boinc    635106 Apr 28 23:54 log.44292257._027902.job.log.1
[2025-04-28 23:54:05] -rw------- 1 yeti boinc       357 Apr 28 23:54 output.list
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc       620 Apr 28 23:54 runtime_log
[2025-04-28 23:54:05] -rw------- 1 yeti boinc    911360 Apr 28 23:54 result.tar.gz
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc     11623 Apr 28 23:54 runtime_log.err
[2025-04-28 23:54:05] -rw------- 1 yeti boinc       640 Apr 28 23:54 eoaNDmnMUT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCqtLDmvYw9rn.diag
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc      8192 Apr 28 23:54 boinc_mmap_file
[2025-04-28 23:54:05] -rw-r--r-- 1 yeti boinc     20538 Apr 28 23:54 stderr.txt
[2025-04-28 23:54:05] HITS file was successfully produced:
[2025-04-28 23:54:05] -rw------- 1 yeti boinc 200312238 Apr 28 23:53 shared/HITS.pool.root.1
[2025-04-28 23:54:05]  *** Contents of shared directory: ***
[2025-04-28 23:54:05] insgesamt 413084
[2025-04-28 23:54:05] -rw-r--r-- 2 yeti boinc 221228360 Apr 28 22:11 ATLAS.root_0
[2025-04-28 23:54:05] -rw-r--r-- 2 yeti boinc     17569 Apr 28 22:11 start_atlas.sh
[2025-04-28 23:54:05] -rw-r--r-- 2 yeti boinc    508883 Apr 28 22:11 input.tar.gz
[2025-04-28 23:54:05] -rw------- 1 yeti boinc 200312238 Apr 28 23:53 HITS.pool.root.1
[2025-04-28 23:54:05] -rw------- 1 yeti boinc    911360 Apr 28 23:54 result.tar.gz
23:54:07 (3777062): run_atlas exited; CPU time 23000.476721
23:54:07 (3777062): called boinc_finish(0)

</stderr_txt>
]]>

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