Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:33:24 (1585109): wrapper (7.7.26015): starting
05:33:24 (1585109): wrapper: running run_atlas (--nthreads 3)
[2025-04-29 05:33:24] Arguments: --nthreads 3
[2025-04-29 05:33:24] Threads: 3
[2025-04-29 05:33:24] Checking for CVMFS
[2025-04-29 05:33:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-29 05:33:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-29 05:33:24] Running cvmfs_config stat atlas.cern.ch
[2025-04-29 05:33:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-29 05:33:24] 2.9.2.0 9735 5869 86632 145397 3 56 32723049 36864000 0 130560 0 4056517 99.990 1492848 1407 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-29 05:33:24] CVMFS is ok
[2025-04-29 05:33:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-29 05:33:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-29 05:33:24] Further information can be found at the LHC@home message board.
[2025-04-29 05:33:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-29 05:33:24] Checking for apptainer binary...
[2025-04-29 05:33:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-29 05:33:24] Running /usr/bin/apptainer --version
[2025-04-29 05:33:24] apptainer version 1.3.6-6.1
[2025-04-29 05:33:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-29 05:33:25] thA312a
[2025-04-29 05:33:25] apptainer works
[2025-04-29 05:33:25] Set ATHENA_PROC_NUMBER=3
[2025-04-29 05:33:25] Set ATHENA_CORE_NUMBER=3
[2025-04-29 05:33:25] Starting ATLAS job with PandaID=6600391144
[2025-04-29 05:33:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 07:01:58]  *** The last 200 lines of the pilot log: ***
[2025-04-29 07:01:58]  status_code=0
[2025-04-29 07:01:58]  storage_token=
[2025-04-29 07:01:58]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6600391144/log.44075164._038939.job.log.tgz.1
[2025-04-29 07:01:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/d3/log.44075164._038939.job.log.tgz.1
[2025-04-29 07:01:58]  workdir=None
[2025-04-29 07:01:58] ]
[2025-04-29 07:01:58] 2025-04-29 05:01:32,868 | INFO     | transferring file log.44075164._038939.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6600391144/log.44075164._038939.job.log.tgz.1 to /local/data/boinc/
[2025-04-29 07:01:58] 2025-04-29 05:01:32,868 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6600391144/log.44075164._038939.job.log.tgz.1 /local/data/boinc/slots/0/log.44075164._0389
[2025-04-29 07:01:58] 2025-04-29 05:01:32,881 | INFO     | adding to output.list: log.44075164._038939.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/d3/log.44075164._038939.job.log.tg
[2025-04-29 07:01:58] 2025-04-29 05:01:32,882 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-29 07:01:58] 2025-04-29 05:01:32,882 | INFO     | summary of transferred files:
[2025-04-29 07:01:58] 2025-04-29 05:01:32,882 | INFO     |  -- lfn=log.44075164._038939.job.log.tgz.1, status_code=0, status=transferred
[2025-04-29 07:01:58] 2025-04-29 05:01:32,882 | INFO     | stage-out finished correctly
[2025-04-29 07:01:58] 2025-04-29 05:01:34,773 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-29 07:01:58] 2025-04-29 05:01:35,860 | INFO     | job 6600391144 has state=finished
[2025-04-29 07:01:58] 2025-04-29 05:01:35,860 | INFO     | preparing for final server update for job 6600391144 in state='finished'
[2025-04-29 07:01:58] 2025-04-29 05:01:35,860 | INFO     | this job has now completed (state=finished)
[2025-04-29 07:01:58] 2025-04-29 05:01:35,861 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-29 07:01:58] 2025-04-29 05:01:35,861 | INFO     | log transfer has been attempted: DONE
[2025-04-29 07:01:58] 2025-04-29 05:01:35,861 | INFO     | job 6600391144 has finished - writing final server update
[2025-04-29 07:01:58] 2025-04-29 05:01:35,861 | INFO     | total number of processed events: 400 (read)
[2025-04-29 07:01:58] 2025-04-29 05:01:35,862 | INFO     | executing command: lscpu
[2025-04-29 07:01:58] 2025-04-29 05:01:35,879 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-29 07:01:58] 2025-04-29 05:01:36,220 | INFO     | PID=1588769 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-29 07:01:58] 2025-04-29 05:01:38,498 | WARNING  | process 1595205 can no longer be monitored (due to stat problems) - aborting
[2025-04-29 07:01:58] 2025-04-29 05:01:38,498 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6600391144/memory_monitor_summary.json (trf name=prmon)
[2025-04-29 07:01:58] 2025-04-29 05:01:38,498 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6600391144/memory_monitor_summary.json (trf name=prmon)
[2025-04-29 07:01:58] 2025-04-29 05:01:38,499 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2012684 B
[2025-04-29 07:01:58] 2025-04-29 05:01:38,499 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15556 B
[2025-04-29 07:01:58] 2025-04-29 05:01:38,499 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-29 07:01:58] 2025-04-29 05:01:39,521 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-29 07:01:58] 2025-04-29 05:01:39,521 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6600391144/memory_monitor_summary.json (trf name=prmon)
[2025-04-29 07:01:58] 2025-04-29 05:01:39,524 | INFO     | extracted standard info from prmon json
[2025-04-29 07:01:58] 2025-04-29 05:01:39,524 | INFO     | extracted standard memory fields from prmon json
[2025-04-29 07:01:58] 2025-04-29 05:01:39,524 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-29 07:01:58] 2025-04-29 05:01:39,525 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-29 07:01:58] 2025-04-29 05:01:39,525 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-29 07:01:58] 2025-04-29 05:01:39,526 | INFO     | fitting pss+swap vs Time
[2025-04-29 07:01:58] 2025-04-29 05:01:39,526 | INFO     | sum of square deviations: 158737860.0
[2025-04-29 07:01:58] 2025-04-29 05:01:39,526 | INFO     | sum of deviations: 848106119.0
[2025-04-29 07:01:58] 2025-04-29 05:01:39,526 | INFO     | mean x: 1745900344.5
[2025-04-29 07:01:58] 2025-04-29 05:01:39,526 | INFO     | mean y: 2394421.2
[2025-04-29 07:01:58] 2025-04-29 05:01:39,526 | INFO     | -- intersect: -9325618223.890831
[2025-04-29 07:01:58] 2025-04-29 05:01:39,526 | INFO     | intersect: -9325618223.890831
[2025-04-29 07:01:58] 2025-04-29 05:01:39,527 | INFO     | chi2: 1.5596163931679874
[2025-04-29 07:01:58] 2025-04-29 05:01:39,527 | INFO     | -- intersect: -9325618223.890831
[2025-04-29 07:01:58] 2025-04-29 05:01:39,527 | INFO     | current memory leak: 5.34 B/s (using 80 data points, chi2=1.56)
[2025-04-29 07:01:58] 2025-04-29 05:01:39,527 | INFO     | ..............................
[2025-04-29 07:01:58] 2025-04-29 05:01:39,528 | INFO     | . Timing measurements:
[2025-04-29 07:01:58] 2025-04-29 05:01:39,528 | INFO     | . get job = 0 s
[2025-04-29 07:01:58] 2025-04-29 05:01:39,528 | INFO     | . initial setup = 1 s
[2025-04-29 07:01:58] 2025-04-29 05:01:39,528 | INFO     | . payload setup = 3 s
[2025-04-29 07:01:58] 2025-04-29 05:01:39,528 | INFO     | . stage-in = 0 s
[2025-04-29 07:01:58] 2025-04-29 05:01:39,528 | INFO     | . payload execution = 5262 s
[2025-04-29 07:01:58] 2025-04-29 05:01:39,528 | INFO     | . stage-out = 0 s
[2025-04-29 07:01:58] 2025-04-29 05:01:39,528 | INFO     | . log creation = 0 s
[2025-04-29 07:01:58] 2025-04-29 05:01:39,528 | INFO     | ..............................
[2025-04-29 07:01:58] 2025-04-29 05:01:39,541 | INFO     | sufficient remaining disk space (267394220032 B)
[2025-04-29 07:01:58] 2025-04-29 05:01:39,542 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | 
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | job summary report
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | --------------------------------------------------
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | PanDA job id: 6600391144
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | task id: 44075164
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | errors: (none)
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | pilot state: finished 
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | transexitcode: 0
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | exeerrorcode: 0
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | exeerrordiag: 
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | exitcode: 0
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | exitmsg: OK
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | cpuconsumptiontime: 13921 s
[2025-04-29 07:01:58] 2025-04-29 05:01:39,560 | INFO     | nevents: 400
[2025-04-29 07:01:58] 2025-04-29 05:01:39,561 | INFO     | neventsw: 0
[2025-04-29 07:01:58] 2025-04-29 05:01:39,561 | INFO     | pid: 1595205
[2025-04-29 07:01:58] 2025-04-29 05:01:39,561 | INFO     | pgrp: 1595205
[2025-04-29 07:01:58] 2025-04-29 05:01:39,561 | INFO     | corecount: 3
[2025-04-29 07:01:58] 2025-04-29 05:01:39,561 | INFO     | event service: False
[2025-04-29 07:01:58] 2025-04-29 05:01:39,561 | INFO     | sizes: {0: 2393730, 3: 2393936, 11: 2393964, 5269: 2429424, 5271: 2429424, 5276: 2429594}
[2025-04-29 07:01:58] 2025-04-29 05:01:39,561 | INFO     | --------------------------------------------------
[2025-04-29 07:01:58] 2025-04-29 05:01:39,561 | INFO     | 
[2025-04-29 07:01:58] 2025-04-29 05:01:39,561 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-29 07:01:58] 2025-04-29 05:01:39,563 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6600391144: 2312777 B (within 2537553920 B limit)
[2025-04-29 07:01:58] 2025-04-29 05:01:39,564 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6600391144/HITS.44075164._038939.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-29 07:01:58] 2025-04-29 05:01:39,564 | INFO     | total size of present files: 0 B (workdir size: 2312777 B)
[2025-04-29 07:01:58] 2025-04-29 05:01:39,564 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6600391144/HITS.44075164._038939.pool.root.1 since it does not exist
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,574 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 07:01:58] 2025-04-29 05:01:39,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,574 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 07:01:58] 2025-04-29 05:01:39,574 | INFO     | job 6600391144 has completed (purged errors)
[2025-04-29 07:01:58] 2025-04-29 05:01:39,574 | INFO     | overall cleanup function is called
[2025-04-29 07:01:58] 2025-04-29 05:01:39,611 | INFO     | number of running child processes to parent process 1595205: 1
[2025-04-29 07:01:58] 2025-04-29 05:01:39,611 | INFO     | maximum number of monitored processes: 6
[2025-04-29 07:01:58] 2025-04-29 05:01:39,611 | INFO     | aborting job monitoring since job object (job id=6600391144) has expired
[2025-04-29 07:01:58] 2025-04-29 05:01:40,578 | INFO     | --- collectZombieJob: --- 10, [1595205]
[2025-04-29 07:01:58] 2025-04-29 05:01:40,579 | INFO     | zombie collector waiting for pid 1595205
[2025-04-29 07:01:58] 2025-04-29 05:01:40,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 07:01:58] 2025-04-29 05:01:40,579 | INFO     | collected zombie processes
[2025-04-29 07:01:58] 2025-04-29 05:01:40,579 | INFO     | will attempt to kill all subprocesses of pid=1595205
[2025-04-29 07:01:58] 2025-04-29 05:01:40,624 | INFO     | process IDs to be killed: [1595205] (in reverse order)
[2025-04-29 07:01:58] 2025-04-29 05:01:40,651 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 07:01:58] 2025-04-29 05:01:40,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 07:01:58] 2025-04-29 05:01:40,652 | INFO     | did not find any defunct processes belonging to 1595205
[2025-04-29 07:01:58] 2025-04-29 05:01:40,653 | INFO     | did not find any defunct processes belonging to 1595205
[2025-04-29 07:01:58] 2025-04-29 05:01:40,653 | INFO     | ready for new job
[2025-04-29 07:01:58] 2025-04-29 05:01:40,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 07:01:58] 2025-04-29 05:01:40,654 | INFO     | **************************************
[2025-04-29 07:01:58] 2025-04-29 05:01:40,654 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 07:01:58] 2025-04-29 05:01:40,654 | INFO     | **************************************
[2025-04-29 07:01:58] 2025-04-29 05:01:40,654 | INFO     | 
[2025-04-29 07:01:58] 2025-04-29 05:01:40,655 | INFO     | architecture information:
[2025-04-29 07:01:58] 2025-04-29 05:01:40,655 | INFO     | executing command: cat /etc/os-release
[2025-04-29 07:01:58] 2025-04-29 05:01:40,664 | INFO     | cat /etc/os-release:
[2025-04-29 07:01:58] NAME="CentOS Linux"
[2025-04-29 07:01:58] VERSION="7 (Core)"
[2025-04-29 07:01:58] ID="centos"
[2025-04-29 07:01:58] ID_LIKE="rhel fedora"
[2025-04-29 07:01:58] VERSION_ID="7"
[2025-04-29 07:01:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 07:01:58] ANSI_COLOR="0;31"
[2025-04-29 07:01:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 07:01:58] HOME_URL="https://www.centos.org/"
[2025-04-29 07:01:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 07:01:58] 
[2025-04-29 07:01:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 07:01:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 07:01:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 07:01:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 07:01:58] 
[2025-04-29 07:01:58] 2025-04-29 05:01:40,664 | INFO     | **************************************
[2025-04-29 07:01:58] 2025-04-29 05:01:41,167 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-29 07:01:58] 2025-04-29 05:01:41,179 | INFO     | sufficient remaining disk space (267397365760 B)
[2025-04-29 07:01:58] 2025-04-29 05:01:41,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 07:01:58] 2025-04-29 05:01:41,180 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 07:01:58] 2025-04-29 05:01:41,180 | INFO     | update_server=False
[2025-04-29 07:01:58] 2025-04-29 05:01:41,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 07:01:58] 2025-04-29 05:01:41,180 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-29 07:01:58] 2025-04-29 05:01:41,180 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 07:01:58] 2025-04-29 05:01:41,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 07:01:58] 2025-04-29 05:01:41,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 07:01:58] 2025-04-29 05:01:41,180 | INFO     | all payload control threads have been joined
[2025-04-29 07:01:58] 2025-04-29 05:01:41,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 07:01:58] 2025-04-29 05:01:41,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 07:01:58] 2025-04-29 05:01:41,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 07:01:58] 2025-04-29 05:01:41,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 07:01:58] 2025-04-29 05:01:41,181 | INFO     | aborting loop
[2025-04-29 07:01:58] 2025-04-29 05:01:41,491 | INFO     | all data control threads have been joined
[2025-04-29 07:01:58] 2025-04-29 05:01:42,186 | INFO     | [job] retrieve thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:42,186 | INFO     | [payload] control thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:42,186 | INFO     | [job] queue monitor thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:42,186 | INFO     | [job] job monitor thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:42,352 | INFO     | [data] copytool_in thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:42,497 | INFO     | [data] control thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:42,518 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:42,644 | INFO     | [job] validate thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:42,682 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:42,759 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:42,792 | INFO     | all job control threads have been joined
[2025-04-29 07:01:58] 2025-04-29 05:01:43,153 | INFO     | [payload] validate_post thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:43,187 | INFO     | [data] copytool_out thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:43,386 | INFO     | [payload] failed_post thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:43,798 | INFO     | [job] control thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:45,188 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:51,417 | INFO     | job.realtimelogging is not enabled
[2025-04-29 07:01:58] 2025-04-29 05:01:52,423 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 07:01:58] 2025-04-29 05:01:53,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673925404480)>', '<ExcThread(monitor, started 139673041090304)>']
[2025-04-29 07:01:58] 2025-04-29 05:01:53,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 07:01:58] 2025-04-29 05:01:53,245 | INFO     | [monitor] control thread has ended
[2025-04-29 07:01:58] 2025-04-29 05:01:58,065 | INFO     | all workflow threads have been joined
[2025-04-29 07:01:58] 2025-04-29 05:01:58,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 07:01:58] 2025-04-29 05:01:58,066 | INFO     | traces error code: 0
[2025-04-29 07:01:58] 2025-04-29 05:01:58,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 07:01:58] 2025-04-29 05:01:58,117 [wrapper] ==== pilot stdout END ====
[2025-04-29 07:01:58] 2025-04-29 05:01:58,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 07:01:58] 2025-04-29 05:01:58,122 [wrapper] pilotpid: 1588769
[2025-04-29 07:01:58] 2025-04-29 05:01:58,124 [wrapper] Pilot exit status: 0
[2025-04-29 07:01:58] 2025-04-29 05:01:58,132 [wrapper] pandaids: 6600391144
[2025-04-29 07:01:58] 2025-04-29 05:01:58,150 [wrapper] cleanup supervisor_pilot 1607211 1588770
[2025-04-29 07:01:58] 2025-04-29 05:01:58,153 [wrapper] Test setup, not cleaning
[2025-04-29 07:01:58] 2025-04-29 05:01:58,155 [wrapper] apfmon messages muted
[2025-04-29 07:01:58] 2025-04-29 05:01:58,158 [wrapper] ==== wrapper stdout END ====
[2025-04-29 07:01:58] 2025-04-29 05:01:58,160 [wrapper] ==== wrapper stderr END ====
[2025-04-29 07:01:58]  *** Error codes and diagnostics ***
[2025-04-29 07:01:58]     "exeErrorCode": 0,
[2025-04-29 07:01:58]     "exeErrorDiag": "",
[2025-04-29 07:01:58]     "pilotErrorCode": 0,
[2025-04-29 07:01:58]     "pilotErrorDiag": "",
[2025-04-29 07:01:58]  *** Listing of results directory ***
[2025-04-29 07:01:58] total 415836
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc    495897 Apr 12 05:35 pilot3.tar.gz
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc      5111 Apr 12 05:47 queuedata.json
[2025-04-29 07:01:58] -rwx------ 1 boinc boinc     37140 Apr 12 05:48 runpilot2-wrapper.sh
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc       100 Apr 29 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 07:01:58] -rwxr-xr-x 1 boinc boinc      7986 Apr 29 05:33 run_atlas
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc       105 Apr 29 05:33 job.xml
[2025-04-29 07:01:58] -rw-r--r-- 2 boinc boinc 221773711 Apr 29 05:33 EVNT.44075162._001506.pool.root.1
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc      6930 Apr 29 05:33 init_data.xml
[2025-04-29 07:01:58] drwxrwx--x 2 boinc boinc      4096 Apr 29 05:33 shared
[2025-04-29 07:01:58] -rw-r--r-- 2 boinc boinc    508889 Apr 29 05:33 input.tar.gz
[2025-04-29 07:01:58] -rw-r--r-- 2 boinc boinc     17569 Apr 29 05:33 start_atlas.sh
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc         0 Apr 29 05:33 boinc_lockfile
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc      2550 Apr 29 05:33 pandaJob.out
[2025-04-29 07:01:58] -rw------- 1 boinc boinc       424 Apr 29 05:33 setup.sh.local
[2025-04-29 07:01:58] -rw------- 1 boinc boinc    995438 Apr 29 05:33 agis_schedconf.cvmfs.json
[2025-04-29 07:01:58] -rw------- 1 boinc boinc   1596659 Apr 29 05:33 agis_ddmendpoints.agis.ALL.json
[2025-04-29 07:01:58] drwx------ 4 boinc boinc      4096 Apr 29 05:33 pilot3
[2025-04-29 07:01:58] -rw------- 1 boinc boinc        95 Apr 29 07:00 pilot_heartbeat.json
[2025-04-29 07:01:58] -rw------- 1 boinc boinc 198720786 Apr 29 07:01 HITS.44075164._038939.pool.root.1
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc       529 Apr 29 07:01 boinc_task_state.xml
[2025-04-29 07:01:58] -rw------- 1 boinc boinc      1018 Apr 29 07:01 memory_monitor_summary.json
[2025-04-29 07:01:58] -rw------- 1 boinc boinc    225505 Apr 29 07:01 log.44075164._038939.job.log.tgz.1
[2025-04-29 07:01:58] -rw------- 1 boinc boinc      7651 Apr 29 07:01 heartbeat.json
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc      8192 Apr 29 07:01 boinc_mmap_file
[2025-04-29 07:01:58] -rw------- 1 boinc boinc      4552 Apr 29 07:01 pilotlog.txt
[2025-04-29 07:01:58] -rw------- 1 boinc boinc    511251 Apr 29 07:01 log.44075164._038939.job.log.1
[2025-04-29 07:01:58] -rw------- 1 boinc boinc       357 Apr 29 07:01 output.list
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc       620 Apr 29 07:01 runtime_log
[2025-04-29 07:01:58] -rw------- 1 boinc boinc    757760 Apr 29 07:01 result.tar.gz
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc     11104 Apr 29 07:01 runtime_log.err
[2025-04-29 07:01:58] -rw------- 1 boinc boinc       659 Apr 29 07:01 lqaNDmk1gN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm7xxKDm7je7Rn.diag
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc        27 Apr 29 07:01 wrapper_checkpoint.txt
[2025-04-29 07:01:58] -rw-r--r-- 1 boinc boinc     22380 Apr 29 07:01 stderr.txt
[2025-04-29 07:01:58] HITS file was successfully produced:
[2025-04-29 07:01:58] -rw------- 1 boinc boinc 198720786 Apr 29 07:01 shared/HITS.pool.root.1
[2025-04-29 07:01:58]  *** Contents of shared directory: ***
[2025-04-29 07:01:58] total 411908
[2025-04-29 07:01:58] -rw-r--r-- 2 boinc boinc 221773711 Apr 29 05:33 ATLAS.root_0
[2025-04-29 07:01:58] -rw-r--r-- 2 boinc boinc    508889 Apr 29 05:33 input.tar.gz
[2025-04-29 07:01:58] -rw-r--r-- 2 boinc boinc     17569 Apr 29 05:33 start_atlas.sh
[2025-04-29 07:01:58] -rw------- 1 boinc boinc 198720786 Apr 29 07:01 HITS.pool.root.1
[2025-04-29 07:01:58] -rw------- 1 boinc boinc    757760 Apr 29 07:01 result.tar.gz
07:02:00 (1585109): run_atlas exited; CPU time 13942.053355
07:02:00 (1585109): called boinc_finish(0)

</stderr_txt>
]]>

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