Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-28 10:16:37 (1998666): Detected: vboxwrapper 26206
2025-04-28 10:16:37 (1998666): Detected: BOINC client v8.0.4
2025-04-28 10:16:37 (1998666): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-04-28 10:16:38 (1998666): Successfully copied 'init_data.xml' to the shared directory.
2025-04-28 10:16:38 (1998666): Create VM. (boinc_3cd314b1e23356a8, slot#1)
2025-04-28 10:16:39 (1998666): Setting Memory Size for VM. (4200MB)
2025-04-28 10:16:39 (1998666): Setting CPU Count for VM. (2)
2025-04-28 10:16:39 (1998666): Setting Chipset Options for VM.
2025-04-28 10:16:40 (1998666): Setting Graphics Controller Options for VM.
2025-04-28 10:16:40 (1998666): Setting Boot Options for VM.
2025-04-28 10:16:41 (1998666): Setting Network Configuration for NAT.
2025-04-28 10:16:41 (1998666): Enabling VM Network Access.
2025-04-28 10:16:41 (1998666): Disabling USB Support for VM.
2025-04-28 10:16:42 (1998666): Disabling COM Port Support for VM.
2025-04-28 10:16:42 (1998666): Disabling LPT Port Support for VM.
2025-04-28 10:16:42 (1998666): Disabling Audio Support for VM.
2025-04-28 10:16:42 (1998666): Disabling Clipboard Support for VM.
2025-04-28 10:16:43 (1998666): Disabling Drag and Drop Support for VM.
2025-04-28 10:16:43 (1998666): Adding storage controller(s) to VM.
2025-04-28 10:16:43 (1998666): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-28 10:16:47 (1998666): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-28 10:16:47 (1998666): forwarding host port 45311 to guest port 80
2025-04-28 10:16:47 (1998666): Enabling remote desktop for VM.
2025-04-28 10:16:48 (1998666): Enabling shared directory for VM.
2025-04-28 10:16:49 (1998666): Starting VM using VBoxManage interface. (boinc_3cd314b1e23356a8, slot#1)
2025-04-28 10:16:51 (1998666): Successfully started VM. (PID = '1999143')
2025-04-28 10:16:51 (1998666): Reporting VM Process ID to BOINC.
2025-04-28 10:16:51 (1998666): Guest Log: BIOS: VirtualBox 7.0.16
2025-04-28 10:16:51 (1998666): Guest Log: CPUID EDX: 0x178bfbff
2025-04-28 10:16:51 (1998666): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-28 10:16:51 (1998666): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-28 10:16:51 (1998666): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-28 10:16:51 (1998666): Detected: Web Application Enabled (http://localhost:45311)
2025-04-28 10:16:51 (1998666): Detected: Remote Desktop Enabled (localhost:53143)
2025-04-28 10:16:51 (1998666): Preference change detected
2025-04-28 10:16:51 (1998666): Setting CPU throttle for VM. (100%)
2025-04-28 10:16:51 (1998666): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-28 10:16:53 (1998666): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-28 10:16:54 (1998666): Guest Log: BIOS: Booting from Hard Disk...
2025-04-28 10:16:59 (1998666): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-28 10:16:59 (1998666): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-28 10:16:59 (1998666): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-28 10:17:23 (1998666): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-28 10:17:23 (1998666): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-28 10:18:35 (1998666): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-28 10:18:35 (1998666): Guest Log: 00:00:00.001281 main     Log opened 2025-04-28T17:18:33.904122000Z
2025-04-28 10:18:35 (1998666): Guest Log: 00:00:00.002167 main     OS Product: Linux
2025-04-28 10:18:35 (1998666): Guest Log: 00:00:00.002472 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-28 10:18:35 (1998666): Guest Log: 00:00:00.002607 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-28 10:18:35 (1998666): Guest Log: 00:00:00.002907 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-28 10:18:35 (1998666): Guest Log: 00:00:00.002912 main     Process ID: 1256
2025-04-28 10:18:35 (1998666): Guest Log: 00:00:00.002917 main     Package type: LINUX_64BITS_GENERIC
2025-04-28 10:18:35 (1998666): Guest Log: 00:00:00.010093 main     5.2.32 r132073 started. Verbose level = 0
2025-04-28 10:18:37 (1998666): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-28 10:18:37 (1998666): Guest Log: [INFO] Mounting shared directory
2025-04-28 10:18:37 (1998666): Guest Log: [INFO] Checking for init_data.xml
2025-04-28 10:18:50 (1998666): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-28 10:18:50 (1998666): Guest Log: [INFO] Detected branch: prod
2025-04-28 10:18:51 (1998666): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-28 10:18:51 (1998666): Guest Log: Copying input files
2025-04-28 10:18:53 (1998666): Guest Log: Copied input files into RunAtlas.
2025-04-28 10:18:54 (1998666): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-28 10:18:54 (1998666): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-28 10:18:54 (1998666): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-28 10:18:54 (1998666): Guest Log: Further information can be found at the LHC@home message board.
2025-04-28 10:19:05 (1998666): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-28 10:19:07 (1998666): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-28 10:19:07 (1998666): Guest Log: 2.6.3.0 1535 0 32224 145381 3 1 3119946 4096000 0 65024 0 0 n/a 1171 704 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-28 10:19:17 (1998666): Guest Log: copied the webapp to /var/www
2025-04-28 10:19:17 (1998666): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-28 10:19:17 (1998666): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-28 10:19:19 (1998666): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-28 10:19:19 (1998666): Guest Log:  *** Starting ATLAS job. (PandaID=6618622589 taskID=44292257) ***
2025-04-28 10:53:40 (1998666): Guest Log:  *** Job finished ***
2025-04-28 10:53:40 (1998666): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:28,995 | INFO     | [job] queue monitor thread has finished
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:29,234 | INFO     | [job] control thread has finished
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:30,276 | INFO     | [data] queue_monitor thread has finished
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:31,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140343561541440)>', '<ExcThread(monitor, started 140343131490048)>']
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:32,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:32,305 | INFO     | [monitor] control thread has ended
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:36,700 | INFO     | all workflow threads have been joined
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:36,703 | INFO     | end of generic workflow (traces error code: 0)
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:36,706 | INFO     | traces error code: 0
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:36,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:37,553 [wrapper] ==== pilot stdout END ====
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:37,642 [wrapper] ==== wrapper stdout RESUME ====
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:37,699 [wrapper] pilotpid: 5888
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:37,768 [wrapper] Pilot exit status: 0
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:38,515 [wrapper] pandaids: 6618622589
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:38,826 [wrapper] cleanup supervisor_pilot 30575 5889
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:38,888 [wrapper] Test setup, not cleaning
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:38,963 [wrapper] apfmon messages muted
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:39,019 [wrapper] ==== wrapper stdout END ====
2025-04-28 10:53:41 (1998666): Guest Log: 2025-04-28 17:53:39,075 [wrapper] ==== wrapper stderr END ====
2025-04-28 10:53:41 (1998666): Guest Log:  *** Error codes and diagnostics ***
2025-04-28 10:53:41 (1998666): Guest Log:     "exeErrorCode": 65,
2025-04-28 10:53:41 (1998666): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-04-28 10:53:41 (1998666): Guest Log:     "pilotErrorCode": 1305,
2025-04-28 10:53:41 (1998666): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-04-28 10:53:41 (1998666): Guest Log:  *** Listing of results directory ***
2025-04-28 10:53:41 (1998666): Guest Log: total 4560
2025-04-28 10:53:41 (1998666): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 28 08:35 pilot3.tar.gz
2025-04-28 10:53:41 (1998666): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 28 08:36 queuedata.json
2025-04-28 10:53:41 (1998666): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 28 08:40 runpilot2-wrapper.sh
2025-04-28 10:53:41 (1998666): Guest Log: -rw-r--r--. 1 atlas atlas  508881 Apr 28 17:18 input.tar.gz
2025-04-28 10:53:41 (1998666): Guest Log: -rw-r--r--. 1 atlas atlas   17569 Apr 28 17:18 start_atlas.sh
2025-04-28 10:53:41 (1998666): Guest Log: -rw-r--r--. 1 atlas atlas    6147 Apr 28 17:18 init_data.xml
2025-04-28 10:53:41 (1998666): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 28 17:18 EVNT.44292255._003306.pool.root.1 -> /data/./ATLAS.root_0
2025-04-28 10:53:41 (1998666): Guest Log: -rw-r--r--. 1 atlas atlas    2550 Apr 28 17:19 pandaJob.out
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas     424 Apr 28 17:19 setup.sh.local
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas  995007 Apr 28 17:23 agis_schedconf.cvmfs.json
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas 1596659 Apr 28 17:23 agis_ddmendpoints.agis.ALL.json
2025-04-28 10:53:41 (1998666): Guest Log: drwx------. 4 atlas atlas    4096 Apr 28 17:24 pilot3
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas   67941 Apr 28 17:50 log.44292257._030497.job.log.tgz.1
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas      95 Apr 28 17:53 pilot_heartbeat.json
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas    8063 Apr 28 17:53 heartbeat.json
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas    4536 Apr 28 17:53 pilotlog.txt
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas  386389 Apr 28 17:53 log.44292257._030497.job.log.1
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas     188 Apr 28 17:53 output.list
2025-04-28 10:53:41 (1998666): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 28 17:53 runtime_log
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas  471040 Apr 28 17:53 result.tar.gz
2025-04-28 10:53:41 (1998666): Guest Log: -rw-------. 1 atlas atlas     666 Apr 28 17:53 w53NDm7CZT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmJfCLDmrijIDo.diag
2025-04-28 10:53:41 (1998666): Guest Log: -rw-r--r--. 1 atlas atlas   10840 Apr 28 17:53 runtime_log.err
2025-04-28 10:53:41 (1998666): Guest Log: Looking for outputfile HITS.44292257._030497.pool.root.1
2025-04-28 10:53:41 (1998666): Guest Log: No HITS file was produced
2025-04-28 10:53:41 (1998666): Guest Log: Successfully finished the ATLAS job!
2025-04-28 10:53:41 (1998666): Guest Log: Copying the results back to the shared directory!
2025-04-28 10:53:42 (1998666): Guest Log:  *** Contents of shared directory: ***
2025-04-28 10:53:42 (1998666): Guest Log: total 29160
2025-04-28 10:53:42 (1998666): Guest Log: -rw-r--r--. 1 root root 28845952 Apr 28 17:16 ATLAS.root_0
2025-04-28 10:53:42 (1998666): Guest Log: -rw-r--r--. 1 root root     6147 Apr 28 17:16 init_data.xml
2025-04-28 10:53:42 (1998666): Guest Log: -rw-r--r--. 1 root root   508881 Apr 28 17:16 input.tar.gz
2025-04-28 10:53:42 (1998666): Guest Log: -rw-r--r--. 1 root root   471040 Apr 28 17:53 result.tar.gz
2025-04-28 10:53:42 (1998666): Guest Log: -rw-r--r--. 1 root root    17569 Apr 28 17:16 start_atlas.sh
2025-04-28 10:53:42 (1998666): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-28 10:53:42 (1998666): VM Completion File Detected.
2025-04-28 10:53:42 (1998666): Powering off VM.
2025-04-28 10:53:43 (1998666): Successfully stopped VM.
2025-04-28 10:53:43 (1998666): Deregistering VM. (boinc_3cd314b1e23356a8, slot#1)
2025-04-28 10:53:44 (1998666): Removing network bandwidth throttle group from VM.
2025-04-28 10:53:44 (1998666): Removing VM from VirtualBox.
10:53:50 (1998666): called boinc_finish(0)

</stderr_txt>
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