Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-28 16:22:14 (14532): Detected: vboxwrapper 26206
2025-04-28 16:22:14 (14532): Detected: BOINC client v8.0.2
2025-04-28 16:22:14 (14532): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-04-28 16:22:14 (14532): Successfully copied 'init_data.xml' to the shared directory.
2025-04-28 16:22:15 (14532): Create VM. (boinc_5e45df4f02657d23, slot#4)
2025-04-28 16:22:15 (14532): Setting Memory Size for VM. (4400MB)
2025-04-28 16:22:16 (14532): Setting CPU Count for VM. (4)
2025-04-28 16:22:16 (14532): Setting Chipset Options for VM.
2025-04-28 16:22:16 (14532): Setting Graphics Controller Options for VM.
2025-04-28 16:22:17 (14532): Setting Boot Options for VM.
2025-04-28 16:22:17 (14532): Setting Network Configuration for NAT.
2025-04-28 16:22:17 (14532): Enabling VM Network Access.
2025-04-28 16:22:17 (14532): Disabling USB Support for VM.
2025-04-28 16:22:18 (14532): Disabling COM Port Support for VM.
2025-04-28 16:22:18 (14532): Disabling LPT Port Support for VM.
2025-04-28 16:22:18 (14532): Disabling Audio Support for VM.
2025-04-28 16:22:18 (14532): Disabling Clipboard Support for VM.
2025-04-28 16:22:19 (14532): Disabling Drag and Drop Support for VM.
2025-04-28 16:22:19 (14532): Adding storage controller(s) to VM.
2025-04-28 16:22:19 (14532): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-28 16:22:22 (14532): Adding VirtualBox Guest Additions to VM.
2025-04-28 16:22:22 (14532): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-28 16:22:22 (14532): forwarding host port 25318 to guest port 80
2025-04-28 16:22:23 (14532): Enabling remote desktop for VM.
2025-04-28 16:22:23 (14532): Required extension pack not installed, remote desktop not enabled.
2025-04-28 16:22:23 (14532): Enabling shared directory for VM.
2025-04-28 16:22:23 (14532): Starting VM using VBoxManage interface. (boinc_5e45df4f02657d23, slot#4)
2025-04-28 16:22:33 (14532): Successfully started VM. (PID = '9376')
2025-04-28 16:22:33 (14532): Reporting VM Process ID to BOINC.
2025-04-28 16:22:33 (14532): Guest Log: BIOS: VirtualBox 7.1.8
2025-04-28 16:22:33 (14532): Guest Log: CPUID EDX: 0x178bfbff
2025-04-28 16:22:33 (14532): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-28 16:22:33 (14532): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-28 16:22:33 (14532): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-28 16:22:33 (14532): Detected: Web Application Enabled (http://localhost:25318)
2025-04-28 16:22:33 (14532): Preference change detected
2025-04-28 16:22:33 (14532): Setting CPU throttle for VM. (60%)
2025-04-28 16:22:33 (14532): Setting checkpoint interval to 999 seconds. (Higher value of (Preference: 999 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-28 16:22:35 (14532): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-28 16:22:35 (14532): Guest Log: BIOS: Booting from Hard Disk...
2025-04-28 16:22:44 (14532): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-28 16:22:44 (14532): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-28 16:22:44 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-28 16:22:56 (14532): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-28 16:22:56 (14532): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-28 16:23:11 (14532): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-28 16:23:11 (14532): Guest Log: 00:00:00.000240 main     Log opened 2025-04-28T16:23:09.487805000Z
2025-04-28 16:23:11 (14532): Guest Log: 00:00:00.000409 main     OS Product: Linux
2025-04-28 16:23:11 (14532): Guest Log: 00:00:00.000471 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-28 16:23:11 (14532): Guest Log: 00:00:00.000529 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-28 16:23:11 (14532): Guest Log: 00:00:00.000590 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-28 16:23:11 (14532): Guest Log: 00:00:00.000591 main     Process ID: 1330
2025-04-28 16:23:11 (14532): Guest Log: 00:00:00.000593 main     Package type: LINUX_64BITS_GENERIC
2025-04-28 16:23:11 (14532): Guest Log: 00:00:00.001672 main     5.2.32 r132073 started. Verbose level = 0
2025-04-28 16:23:11 (14532): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-28 16:23:11 (14532): Guest Log: [INFO] Mounting shared directory
2025-04-28 16:23:11 (14532): Guest Log: [INFO] Checking for init_data.xml
2025-04-28 16:23:16 (14532): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-28 16:23:16 (14532): Guest Log: [INFO] Detected branch: prod
2025-04-28 16:23:17 (14532): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-28 16:23:17 (14532): Guest Log: Copying input files
2025-04-28 16:23:18 (14532): Guest Log: Copied input files into RunAtlas.
2025-04-28 16:23:18 (14532): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-28 16:23:18 (14532): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-28 16:23:18 (14532): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-28 16:23:18 (14532): Guest Log: Further information can be found at the LHC@home message board.
2025-04-28 16:23:21 (14532): Guest Log: 00:00:10.003759 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 899 447 000ns (GuestNow=1 745 850 200 591 420 000 ns GuestLast=1 745 857 389 490 867 000 ns fSetTimeLastLoop=true )
2025-04-28 16:23:33 (14532): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-28 16:23:34 (14532): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-28 16:23:34 (14532): Guest Log: 2.6.3.0 1604 0 32208 145376 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-28 16:23:40 (14532): Guest Log: copied the webapp to /var/www
2025-04-28 16:23:40 (14532): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-28 16:23:40 (14532): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-28 16:23:41 (14532): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-28 16:23:41 (14532): Guest Log:  *** Starting ATLAS job. (PandaID=6618577466 taskID=44292257) ***
2025-04-28 16:24:15 (14532): Preference change detected
2025-04-28 16:24:15 (14532): Setting CPU throttle for VM. (90%)
2025-04-28 16:24:15 (14532): Setting checkpoint interval to 999 seconds. (Higher value of (Preference: 999 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-28 18:02:57 (14532): Status Report: Elapsed Time: '6000.079826'
2025-04-28 18:02:57 (14532): Status Report: CPU Time: '14706.218750'
2025-04-28 19:43:13 (14532): Status Report: Elapsed Time: '12000.079826'
2025-04-28 19:43:13 (14532): Status Report: CPU Time: '36322.671875'
2025-04-28 21:23:29 (14532): Status Report: Elapsed Time: '18000.079826'
2025-04-28 21:23:29 (14532): Status Report: CPU Time: '57943.812500'
2025-04-28 23:03:46 (14532): Status Report: Elapsed Time: '24000.079826'
2025-04-28 23:03:46 (14532): Status Report: CPU Time: '79565.328125'
2025-04-29 00:44:02 (14532): Status Report: Elapsed Time: '30000.079826'
2025-04-29 00:44:02 (14532): Status Report: CPU Time: '101183.828125'
2025-04-29 01:21:20 (14532): Guest Log:  *** Job finished ***
2025-04-29 01:21:20 (14532): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:08,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:09,558 | INFO     | [job] queue monitor thread has finished
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:09,781 | INFO     | [data] queue_monitor thread has finished
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:10,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543200524096)>', '<ExcThread(monitor, started 140542889400064)>']
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:11,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:11,721 | INFO     | [monitor] control thread has ended
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:15,857 | INFO     | all workflow threads have been joined
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:15,857 | INFO     | end of generic workflow (traces error code: 0)
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:15,857 | INFO     | traces error code: 0
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:15,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:15,978 [wrapper] ==== pilot stdout END ====
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:15,983 [wrapper] ==== wrapper stdout RESUME ====
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:15,988 [wrapper] pilotpid: 5928
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:15,993 [wrapper] Pilot exit status: 0
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:16,281 [wrapper] pandaids: 6618577466
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:16,327 [wrapper] cleanup supervisor_pilot  7185 5929
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:16,338 [wrapper] Test setup, not cleaning
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:16,344 [wrapper] apfmon messages muted
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:16,350 [wrapper] ==== wrapper stdout END ====
2025-04-29 01:21:20 (14532): Guest Log: 2025-04-28 23:21:16,355 [wrapper] ==== wrapper stderr END ====
2025-04-29 01:21:20 (14532): Guest Log:  *** Error codes and diagnostics ***
2025-04-29 01:21:20 (14532): Guest Log:     "exeErrorCode": 0,
2025-04-29 01:21:20 (14532): Guest Log:     "exeErrorDiag": "",
2025-04-29 01:21:20 (14532): Guest Log:     "pilotErrorCode": 0,
2025-04-29 01:21:20 (14532): Guest Log:     "pilotErrorDiag": "",
2025-04-29 01:21:20 (14532): Guest Log:  *** Listing of results directory ***
2025-04-29 01:21:20 (14532): Guest Log: total 212816
2025-04-29 01:21:20 (14532): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 28 07:57 pilot3.tar.gz
2025-04-29 01:21:20 (14532): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 28 08:00 runpilot2-wrapper.sh
2025-04-29 01:21:20 (14532): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 28 08:00 queuedata.json
2025-04-29 01:21:20 (14532): Guest Log: -rwxr-xr-x. 1 atlas atlas      9140 Apr 28 14:23 init_data.xml
2025-04-29 01:21:20 (14532): Guest Log: -rwxr-xr-x. 1 atlas atlas    508879 Apr 28 14:23 input.tar.gz
2025-04-29 01:21:20 (14532): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 28 14:23 start_atlas.sh
2025-04-29 01:21:20 (14532): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 28 14:23 EVNT.44292255._003192.pool.root.1 -> /data/./ATLAS.root_0
2025-04-29 01:21:20 (14532): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Apr 28 14:23 pandaJob.out
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas       424 Apr 28 14:23 setup.sh.local
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas    994636 Apr 28 14:25 agis_schedconf.cvmfs.json
2025-04-29 01:21:20 (14532): Guest Log: drwx------. 4 atlas atlas      4096 Apr 28 14:26 pilot3
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas 208240320 Apr 28 23:19 HITS.44292257._030143.pool.root.1
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas        95 Apr 28 23:20 pilot_heartbeat.json
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas      1033 Apr 28 23:20 memory_monitor_summary.json
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 28 23:20 agis_ddmendpoints.agis.ALL.json
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas    458845 Apr 28 23:20 log.44292257._030143.job.log.tgz.1
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas      7693 Apr 28 23:21 heartbeat.json
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 28 23:21 pilotlog.txt
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas   2496460 Apr 28 23:21 log.44292257._030143.job.log.1
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas       357 Apr 28 23:21 output.list
2025-04-29 01:21:20 (14532): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 28 23:21 runtime_log
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas   2969600 Apr 28 23:21 result.tar.gz
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas       663 Apr 28 23:21 TpiMDmHbYT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm0PuLDmCdmdNn.diag
2025-04-29 01:21:20 (14532): Guest Log: -rw-r--r--. 1 atlas atlas     10941 Apr 28 23:21 runtime_log.err
2025-04-29 01:21:20 (14532): Guest Log: Looking for outputfile HITS.44292257._030143.pool.root.1
2025-04-29 01:21:20 (14532): Guest Log: HITS file was successfully produced
2025-04-29 01:21:20 (14532): Guest Log: -rw-------. 1 atlas atlas 208240320 Apr 28 23:19 /home/atlas/RunAtlas/HITS.44292257._030143.pool.root.1
2025-04-29 01:21:22 (14532): Guest Log: Successfully finished the ATLAS job!
2025-04-29 01:21:22 (14532): Guest Log: Copying the results back to the shared directory!
2025-04-29 01:21:22 (14532): Guest Log:  *** Contents of shared directory: ***
2025-04-29 01:21:22 (14532): Guest Log: total 233620
2025-04-29 01:21:22 (14532): Guest Log: -rwxrwxrwx. 1 root root  27470634 Apr 28 14:22 ATLAS.root_0
2025-04-29 01:21:22 (14532): Guest Log: -rwxrwxrwx. 1 root root 208240320 Apr 28 23:21 HITS.pool.root.1
2025-04-29 01:21:22 (14532): Guest Log: -rwxrwxrwx. 1 root root      9140 Apr 28 14:22 init_data.xml
2025-04-29 01:21:22 (14532): Guest Log: -rwxrwxrwx. 1 root root    508879 Apr 28 14:17 input.tar.gz
2025-04-29 01:21:22 (14532): Guest Log: -rwxrwxrwx. 1 root root   2969600 Apr 28 23:21 result.tar.gz
2025-04-29 01:21:22 (14532): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 28 14:17 start_atlas.sh
2025-04-29 01:21:22 (14532): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-29 01:21:22 (14532): VM Completion File Detected.
2025-04-29 01:21:22 (14532): Powering off VM.
2025-04-29 01:21:23 (14532): Successfully stopped VM.
2025-04-29 01:21:23 (14532): Deregistering VM. (boinc_5e45df4f02657d23, slot#4)
2025-04-29 01:21:23 (14532): Removing network bandwidth throttle group from VM.
2025-04-29 01:21:23 (14532): Removing VM from VirtualBox.
01:21:29 (14532): called boinc_finish(0)

</stderr_txt>
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