Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-29 09:41:44 (1688): Detected: vboxwrapper 26206
2025-04-29 09:41:44 (1688): Detected: BOINC client v8.0.2
2025-04-29 09:41:45 (1688): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-04-29 09:41:45 (1688): Successfully copied 'init_data.xml' to the shared directory.
2025-04-29 09:41:46 (1688): Create VM. (boinc_17e4d042246db50d, slot#4)
2025-04-29 09:41:46 (1688): Setting Memory Size for VM. (4400MB)
2025-04-29 09:41:46 (1688): Setting CPU Count for VM. (4)
2025-04-29 09:41:47 (1688): Setting Chipset Options for VM.
2025-04-29 09:41:47 (1688): Setting Graphics Controller Options for VM.
2025-04-29 09:41:47 (1688): Setting Boot Options for VM.
2025-04-29 09:41:48 (1688): Setting Network Configuration for NAT.
2025-04-29 09:41:48 (1688): Enabling VM Network Access.
2025-04-29 09:41:48 (1688): Disabling USB Support for VM.
2025-04-29 09:41:48 (1688): Disabling COM Port Support for VM.
2025-04-29 09:41:49 (1688): Disabling LPT Port Support for VM.
2025-04-29 09:41:49 (1688): Disabling Audio Support for VM.
2025-04-29 09:41:49 (1688): Disabling Clipboard Support for VM.
2025-04-29 09:41:49 (1688): Disabling Drag and Drop Support for VM.
2025-04-29 09:41:50 (1688): Adding storage controller(s) to VM.
2025-04-29 09:41:50 (1688): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-29 09:41:50 (1688): Adding VirtualBox Guest Additions to VM.
2025-04-29 09:41:51 (1688): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-29 09:41:51 (1688): forwarding host port 51238 to guest port 80
2025-04-29 09:41:51 (1688): Enabling remote desktop for VM.
2025-04-29 09:41:51 (1688): Required extension pack not installed, remote desktop not enabled.
2025-04-29 09:41:51 (1688): Enabling shared directory for VM.
2025-04-29 09:41:52 (1688): Starting VM using VBoxManage interface. (boinc_17e4d042246db50d, slot#4)
2025-04-29 09:41:59 (1688): Successfully started VM. (PID = '7604')
2025-04-29 09:41:59 (1688): Reporting VM Process ID to BOINC.
2025-04-29 09:41:59 (1688): Guest Log: BIOS: VirtualBox 7.1.8
2025-04-29 09:41:59 (1688): Guest Log: CPUID EDX: 0x178bfbff
2025-04-29 09:41:59 (1688): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-29 09:41:59 (1688): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-29 09:41:59 (1688): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-29 09:41:59 (1688): Detected: Web Application Enabled (http://localhost:51238)
2025-04-29 09:41:59 (1688): Preference change detected
2025-04-29 09:41:59 (1688): Setting CPU throttle for VM. (90%)
2025-04-29 09:41:59 (1688): Setting checkpoint interval to 999 seconds. (Higher value of (Preference: 999 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-29 09:42:01 (1688): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-29 09:42:01 (1688): Guest Log: BIOS: Booting from Hard Disk...
2025-04-29 09:42:04 (1688): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-29 09:42:04 (1688): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-29 09:42:04 (1688): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-29 09:42:11 (1688): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-29 09:42:11 (1688): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-29 09:42:21 (1688): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-29 09:42:21 (1688): Guest Log: 00:00:00.000136 main     Log opened 2025-04-29T09:42:18.744396000Z
2025-04-29 09:42:21 (1688): Guest Log: 00:00:00.000306 main     OS Product: Linux
2025-04-29 09:42:21 (1688): Guest Log: 00:00:00.000356 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-29 09:42:21 (1688): Guest Log: 00:00:00.000401 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-29 09:42:21 (1688): Guest Log: 00:00:00.000446 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-29 09:42:21 (1688): Guest Log: 00:00:00.000448 main     Process ID: 1308
2025-04-29 09:42:21 (1688): Guest Log: 00:00:00.000449 main     Package type: LINUX_64BITS_GENERIC
2025-04-29 09:42:21 (1688): Guest Log: 00:00:00.001498 main     5.2.32 r132073 started. Verbose level = 0
2025-04-29 09:42:21 (1688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-29 09:42:21 (1688): Guest Log: [INFO] Mounting shared directory
2025-04-29 09:42:21 (1688): Guest Log: [INFO] Checking for init_data.xml
2025-04-29 09:42:26 (1688): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-29 09:42:26 (1688): Guest Log: [INFO] Detected branch: prod
2025-04-29 09:42:26 (1688): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-29 09:42:26 (1688): Guest Log: Copying input files
2025-04-29 09:42:27 (1688): Guest Log: Copied input files into RunAtlas.
2025-04-29 09:42:27 (1688): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-29 09:42:27 (1688): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-29 09:42:27 (1688): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-29 09:42:27 (1688): Guest Log: Further information can be found at the LHC@home message board.
2025-04-29 09:42:31 (1688): Guest Log: 00:00:10.015972 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 132 773 000ns (GuestNow=1 745 912 550 614 533 000 ns GuestLast=1 745 919 738 747 306 000 ns fSetTimeLastLoop=true )
2025-04-29 09:42:37 (1688): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-29 09:42:37 (1688): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-29 09:42:37 (1688): Guest Log: 2.6.3.0 1584 0 30196 145403 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-29 09:42:38 (1688): Guest Log: copied the webapp to /var/www
2025-04-29 09:42:38 (1688): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-29 09:42:38 (1688): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-29 09:42:39 (1688): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-29 09:42:39 (1688): Guest Log:  *** Starting ATLAS job. (PandaID=6618755730 taskID=44292257) ***
2025-04-29 11:22:10 (1688): Status Report: Elapsed Time: '6000.000000'
2025-04-29 11:22:10 (1688): Status Report: CPU Time: '15836.765625'
2025-04-29 13:02:27 (1688): Status Report: Elapsed Time: '12000.000000'
2025-04-29 13:02:27 (1688): Status Report: CPU Time: '37453.390625'
2025-04-29 14:42:43 (1688): Status Report: Elapsed Time: '18000.000000'
2025-04-29 14:42:43 (1688): Status Report: CPU Time: '59073.437500'
2025-04-29 16:23:00 (1688): Status Report: Elapsed Time: '24000.000000'
2025-04-29 16:23:00 (1688): Status Report: CPU Time: '80688.000000'
2025-04-29 18:03:17 (1688): Status Report: Elapsed Time: '30000.000000'
2025-04-29 18:03:17 (1688): Status Report: CPU Time: '102308.796875'
2025-04-29 18:24:53 (1688): Guest Log:  *** Job finished ***
2025-04-29 18:24:53 (1688): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:43,352 | INFO     | [data] copytool_out thread has finished
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:44,226 | INFO     | [job] queue monitor thread has finished
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:45,056 | INFO     | [data] queue_monitor thread has finished
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:46,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374519179072)>', '<ExcThread(monitor, started 140373926065920)>']
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:47,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:47,452 | INFO     | [monitor] control thread has ended
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:51,716 | INFO     | all workflow threads have been joined
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:51,716 | INFO     | end of generic workflow (traces error code: 0)
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:51,716 | INFO     | traces error code: 0
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:51,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:51,827 [wrapper] ==== pilot stdout END ====
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:51,832 [wrapper] ==== wrapper stdout RESUME ====
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:51,837 [wrapper] pilotpid: 5947
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:51,841 [wrapper] Pilot exit status: 0
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:52,563 [wrapper] pandaids: 6618755730
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:52,597 [wrapper] cleanup supervisor_pilot  4566 5948
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:52,603 [wrapper] Test setup, not cleaning
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:52,608 [wrapper] apfmon messages muted
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:52,613 [wrapper] ==== wrapper stdout END ====
2025-04-29 18:24:53 (1688): Guest Log: 2025-04-29 16:24:52,617 [wrapper] ==== wrapper stderr END ====
2025-04-29 18:24:53 (1688): Guest Log:  *** Error codes and diagnostics ***
2025-04-29 18:24:53 (1688): Guest Log:     "exeErrorCode": 0,
2025-04-29 18:24:53 (1688): Guest Log:     "exeErrorDiag": "",
2025-04-29 18:24:53 (1688): Guest Log:     "pilotErrorCode": 0,
2025-04-29 18:24:53 (1688): Guest Log:     "pilotErrorDiag": "",
2025-04-29 18:24:53 (1688): Guest Log:  *** Listing of results directory ***
2025-04-29 18:24:53 (1688): Guest Log: total 206968
2025-04-29 18:24:53 (1688): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 28 11:09 pilot3.tar.gz
2025-04-29 18:24:53 (1688): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 28 11:18 queuedata.json
2025-04-29 18:24:53 (1688): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 28 11:19 runpilot2-wrapper.sh
2025-04-29 18:24:53 (1688): Guest Log: -rwxr-xr-x. 1 atlas atlas      9140 Apr 29 07:42 init_data.xml
2025-04-29 18:24:53 (1688): Guest Log: -rwxr-xr-x. 1 atlas atlas    508879 Apr 29 07:42 input.tar.gz
2025-04-29 18:24:53 (1688): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 29 07:42 start_atlas.sh
2025-04-29 18:24:53 (1688): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 29 07:42 EVNT.44292255._003784.pool.root.1 -> /data/./ATLAS.root_0
2025-04-29 18:24:53 (1688): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Apr 29 07:42 pandaJob.out
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas       424 Apr 29 07:42 setup.sh.local
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas    995552 Apr 29 07:46 agis_schedconf.cvmfs.json
2025-04-29 18:24:53 (1688): Guest Log: drwx------. 4 atlas atlas      4096 Apr 29 07:46 pilot3
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas 202296862 Apr 29 16:23 HITS.44292257._031979.pool.root.1
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas        95 Apr 29 16:24 pilot_heartbeat.json
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas      1032 Apr 29 16:24 memory_monitor_summary.json
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 29 16:24 agis_ddmendpoints.agis.ALL.json
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas    451675 Apr 29 16:24 log.44292257._031979.job.log.tgz.1
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas      7697 Apr 29 16:24 heartbeat.json
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas      4722 Apr 29 16:24 pilotlog.txt
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas   2477879 Apr 29 16:24 log.44292257._031979.job.log.1
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas       357 Apr 29 16:24 output.list
2025-04-29 18:24:53 (1688): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 29 16:24 runtime_log
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas   2949120 Apr 29 16:24 result.tar.gz
2025-04-29 18:24:53 (1688): Guest Log: -rw-r--r--. 1 atlas atlas     10941 Apr 29 16:24 runtime_log.err
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas       662 Apr 29 16:24 1yLKDmEhbT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9kuLDmQgioEo.diag
2025-04-29 18:24:53 (1688): Guest Log: Looking for outputfile HITS.44292257._031979.pool.root.1
2025-04-29 18:24:53 (1688): Guest Log: HITS file was successfully produced
2025-04-29 18:24:53 (1688): Guest Log: -rw-------. 1 atlas atlas 202296862 Apr 29 16:23 /home/atlas/RunAtlas/HITS.44292257._031979.pool.root.1
2025-04-29 18:24:55 (1688): Guest Log: Successfully finished the ATLAS job!
2025-04-29 18:24:55 (1688): Guest Log: Copying the results back to the shared directory!
2025-04-29 18:24:55 (1688): Guest Log:  *** Contents of shared directory: ***
2025-04-29 18:24:55 (1688): Guest Log: total 229160
2025-04-29 18:24:55 (1688): Guest Log: -rwxrwxrwx. 1 root root  28864929 Apr 29 07:41 ATLAS.root_0
2025-04-29 18:24:55 (1688): Guest Log: -rwxrwxrwx. 1 root root 202296862 Apr 29 16:24 HITS.pool.root.1
2025-04-29 18:24:55 (1688): Guest Log: -rwxrwxrwx. 1 root root      9140 Apr 29 07:41 init_data.xml
2025-04-29 18:24:55 (1688): Guest Log: -rwxrwxrwx. 1 root root    508879 Apr 28 14:18 input.tar.gz
2025-04-29 18:24:55 (1688): Guest Log: -rwxrwxrwx. 1 root root   2949120 Apr 29 16:24 result.tar.gz
2025-04-29 18:24:55 (1688): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 28 14:18 start_atlas.sh
2025-04-29 18:24:55 (1688): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-29 18:24:55 (1688): VM Completion File Detected.
2025-04-29 18:24:55 (1688): Powering off VM.
2025-04-29 18:24:56 (1688): Successfully stopped VM.
2025-04-29 18:24:56 (1688): Deregistering VM. (boinc_17e4d042246db50d, slot#4)
2025-04-29 18:24:56 (1688): Removing network bandwidth throttle group from VM.
2025-04-29 18:24:56 (1688): Removing VM from VirtualBox.
18:25:01 (1688): called boinc_finish(0)

</stderr_txt>
]]>

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