Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:50:18 (5490): wrapper (7.7.26015): starting
10:50:18 (5490): wrapper: running run_atlas (--nthreads 12)
[2025-04-28 10:50:18] Arguments: --nthreads 12
[2025-04-28 10:50:18] Threads: 12
[2025-04-28 10:50:18] Checking for CVMFS
[2025-04-28 10:50:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 10:50:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 10:50:18] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 10:50:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 10:50:19] 2.11.2.0 10300 381798 167216 145376 3 60 20109034 20275201 1 130560 0 33050304 99.976 10622762 46699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-28 10:50:19] CVMFS is ok
[2025-04-28 10:50:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 10:50:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-28 10:50:19] Further information can be found at the LHC@home message board.
[2025-04-28 10:50:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 10:50:19] Checking for apptainer binary...
[2025-04-28 10:50:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 10:50:19] Running /usr/bin/apptainer --version
[2025-04-28 10:50:19] apptainer version 1.3.2-1.el7
[2025-04-28 10:50:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 10:50:20] c-205-30.aglt2.org
[2025-04-28 10:50:20] apptainer works
[2025-04-28 10:50:20] Set ATHENA_PROC_NUMBER=12
[2025-04-28 10:50:20] Set ATHENA_CORE_NUMBER=12
[2025-04-28 10:50:20] Starting ATLAS job with PandaID=6618056643
[2025-04-28 10:50:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 12:24:18]  *** The last 200 lines of the pilot log: ***
[2025-04-28 12:24:18]  lfn=log.44292257._026515.job.log.tgz.1
[2025-04-28 12:24:18]  mtime=0
[2025-04-28 12:24:18]  protocol_id=None
[2025-04-28 12:24:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-28 12:24:18]  replicas=None
[2025-04-28 12:24:18]  scope=mc23_13p6TeV
[2025-04-28 12:24:18]  status=None
[2025-04-28 12:24:18]  status_code=0
[2025-04-28 12:24:18]  storage_token=
[2025-04-28 12:24:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6618056643/log.44292257._026515.job.log.tgz.1
[2025-04-28 12:24:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/d5/log.44292257._026515.job.log.tgz.1
[2025-04-28 12:24:18]  workdir=None
[2025-04-28 12:24:18] ]
[2025-04-28 12:24:18] 2025-04-28 16:23:49,184 | INFO     | transferring file log.44292257._026515.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6618056643/log.44292257._026515.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-28 12:24:18] 2025-04-28 16:23:49,184 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6618056643/log.44292257._026515.job.log.tgz.1 /tmp/boinchome/slots/0/log.44292257._026515.job
[2025-04-28 12:24:18] 2025-04-28 16:23:49,207 | INFO     | adding to output.list: log.44292257._026515.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/d5/log.44292257._026515.job.log.tg
[2025-04-28 12:24:18] 2025-04-28 16:23:49,208 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-28 12:24:18] 2025-04-28 16:23:49,208 | INFO     | summary of transferred files:
[2025-04-28 12:24:18] 2025-04-28 16:23:49,208 | INFO     |  -- lfn=log.44292257._026515.job.log.tgz.1, status_code=0, status=transferred
[2025-04-28 12:24:18] 2025-04-28 16:23:49,208 | INFO     | stage-out finished correctly
[2025-04-28 12:24:18] 2025-04-28 16:23:49,697 | WARNING  | process 15801 can no longer be monitored (due to stat problems) - aborting
[2025-04-28 12:24:18] 2025-04-28 16:23:49,697 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6618056643/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 12:24:18] 2025-04-28 16:23:49,785 | INFO     | number of running child processes to parent process 15801: 1
[2025-04-28 12:24:18] 2025-04-28 16:23:49,785 | INFO     | maximum number of monitored processes: 6
[2025-04-28 12:24:18] 2025-04-28 16:23:51,243 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-28 12:24:18] 2025-04-28 16:23:52,288 | INFO     | monitor loop #417: job 0:6618056643 is in state 'finished'
[2025-04-28 12:24:18] 2025-04-28 16:23:52,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 12:24:18] 2025-04-28 16:23:53,693 | INFO     | job 6618056643 has state=finished
[2025-04-28 12:24:18] 2025-04-28 16:23:53,693 | INFO     | preparing for final server update for job 6618056643 in state='finished'
[2025-04-28 12:24:18] 2025-04-28 16:23:53,693 | INFO     | this job has now completed (state=finished)
[2025-04-28 12:24:18] 2025-04-28 16:23:53,694 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-28 12:24:18] 2025-04-28 16:23:53,694 | INFO     | log transfer has been attempted: DONE
[2025-04-28 12:24:18] 2025-04-28 16:23:53,694 | INFO     | job 6618056643 has finished - writing final server update
[2025-04-28 12:24:18] 2025-04-28 16:23:53,694 | INFO     | total number of processed events: 400 (read)
[2025-04-28 12:24:18] 2025-04-28 16:23:53,695 | INFO     | executing command: lscpu
[2025-04-28 12:24:18] 2025-04-28 16:23:53,721 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-28 12:24:18] 2025-04-28 16:23:54,791 | INFO     | monitor loop #418: job 0:6618056643 is in state 'finished'
[2025-04-28 12:24:18] 2025-04-28 16:23:54,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 12:24:18] 2025-04-28 16:23:57,293 | INFO     | monitor loop #419: job 0:6618056643 is in state 'finished'
[2025-04-28 12:24:18] 2025-04-28 16:23:57,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 12:24:18] 2025-04-28 16:23:58,241 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-28 12:24:18] 2025-04-28 16:23:58,242 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6618056643/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 12:24:18] 2025-04-28 16:23:58,242 | INFO     | extracted standard info from prmon json
[2025-04-28 12:24:18] 2025-04-28 16:23:58,243 | INFO     | extracted standard memory fields from prmon json
[2025-04-28 12:24:18] 2025-04-28 16:23:58,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-28 12:24:18] 2025-04-28 16:23:58,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-28 12:24:18] 2025-04-28 16:23:58,243 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-28 12:24:18] 2025-04-28 16:23:58,245 | INFO     | fitting pss+swap vs Time
[2025-04-28 12:24:18] 2025-04-28 16:23:58,245 | INFO     | sum of square deviations: 190403570.0
[2025-04-28 12:24:18] 2025-04-28 16:23:58,245 | INFO     | sum of deviations: 22965048809.999996
[2025-04-28 12:24:18] 2025-04-28 16:23:58,246 | INFO     | mean x: 1745854728.0
[2025-04-28 12:24:18] 2025-04-28 16:23:58,246 | INFO     | mean y: 2575867.8235294116
[2025-04-28 12:24:18] 2025-04-28 16:23:58,246 | INFO     | -- intersect: -210569311222.78757
[2025-04-28 12:24:18] 2025-04-28 16:23:58,246 | INFO     | intersect: -210569311222.78757
[2025-04-28 12:24:18] 2025-04-28 16:23:58,246 | INFO     | chi2: 2.1000982869793177
[2025-04-28 12:24:18] 2025-04-28 16:23:58,246 | INFO     | -- intersect: -210569311222.78757
[2025-04-28 12:24:18] 2025-04-28 16:23:58,246 | INFO     | current memory leak: 120.61 B/s (using 85 data points, chi2=2.10)
[2025-04-28 12:24:18] 2025-04-28 16:23:58,247 | INFO     | ..............................
[2025-04-28 12:24:18] 2025-04-28 16:23:58,247 | INFO     | . Timing measurements:
[2025-04-28 12:24:18] 2025-04-28 16:23:58,247 | INFO     | . get job = 0 s
[2025-04-28 12:24:18] 2025-04-28 16:23:58,247 | INFO     | . initial setup = 2 s
[2025-04-28 12:24:18] 2025-04-28 16:23:58,247 | INFO     | . payload setup = 7 s
[2025-04-28 12:24:18] 2025-04-28 16:23:58,247 | INFO     | . stage-in = 0 s
[2025-04-28 12:24:18] 2025-04-28 16:23:58,247 | INFO     | . payload execution = 5567 s
[2025-04-28 12:24:18] 2025-04-28 16:23:58,248 | INFO     | . stage-out = 0 s
[2025-04-28 12:24:18] 2025-04-28 16:23:58,248 | INFO     | . log creation = 0 s
[2025-04-28 12:24:18] 2025-04-28 16:23:58,248 | INFO     | ..............................
[2025-04-28 12:24:18] 2025-04-28 16:23:58,331 | INFO     | 
[2025-04-28 12:24:18] 2025-04-28 16:23:58,332 | INFO     | job summary report
[2025-04-28 12:24:18] 2025-04-28 16:23:58,332 | INFO     | --------------------------------------------------
[2025-04-28 12:24:18] 2025-04-28 16:23:58,332 | INFO     | PanDA job id: 6618056643
[2025-04-28 12:24:18] 2025-04-28 16:23:58,332 | INFO     | task id: 44292257
[2025-04-28 12:24:18] 2025-04-28 16:23:58,332 | INFO     | errors: (none)
[2025-04-28 12:24:18] 2025-04-28 16:23:58,332 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 12:24:18] 2025-04-28 16:23:58,332 | INFO     | pilot state: finished 
[2025-04-28 12:24:18] 2025-04-28 16:23:58,332 | INFO     | transexitcode: 0
[2025-04-28 12:24:18] 2025-04-28 16:23:58,332 | INFO     | exeerrorcode: 0
[2025-04-28 12:24:18] 2025-04-28 16:23:58,333 | INFO     | exeerrordiag: 
[2025-04-28 12:24:18] 2025-04-28 16:23:58,333 | INFO     | exitcode: 0
[2025-04-28 12:24:18] 2025-04-28 16:23:58,333 | INFO     | exitmsg: OK
[2025-04-28 12:24:18] 2025-04-28 16:23:58,333 | INFO     | cpuconsumptiontime: 52780 s
[2025-04-28 12:24:18] 2025-04-28 16:23:58,333 | INFO     | nevents: 400
[2025-04-28 12:24:18] 2025-04-28 16:23:58,333 | INFO     | neventsw: 0
[2025-04-28 12:24:18] 2025-04-28 16:23:58,333 | INFO     | pid: 15801
[2025-04-28 12:24:18] 2025-04-28 16:23:58,334 | INFO     | pgrp: 15801
[2025-04-28 12:24:18] 2025-04-28 16:23:58,334 | INFO     | corecount: 12
[2025-04-28 12:24:18] 2025-04-28 16:23:58,334 | INFO     | event service: False
[2025-04-28 12:24:18] 2025-04-28 16:23:58,334 | INFO     | sizes: {0: 2393682, 5: 2393888, 11: 2393944, 5577: 2420391, 5578: 2420390, 5580: 2429387, 5582: 2429571, 5589: 2429741}
[2025-04-28 12:24:18] 2025-04-28 16:23:58,334 | INFO     | --------------------------------------------------
[2025-04-28 12:24:18] 2025-04-28 16:23:58,334 | INFO     | 
[2025-04-28 12:24:18] 2025-04-28 16:23:58,334 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-28 12:24:18] 2025-04-28 16:23:58,357 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,357 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,357 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 12:24:18] 2025-04-28 16:23:58,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 12:24:18] 2025-04-28 16:23:58,360 | INFO     | job 6618056643 has completed (purged errors)
[2025-04-28 12:24:18] 2025-04-28 16:23:58,361 | INFO     | overall cleanup function is called
[2025-04-28 12:24:18] 2025-04-28 16:23:59,369 | INFO     | --- collectZombieJob: --- 10, [15801]
[2025-04-28 12:24:18] 2025-04-28 16:23:59,369 | INFO     | zombie collector waiting for pid 15801
[2025-04-28 12:24:18] 2025-04-28 16:23:59,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 12:24:18] 2025-04-28 16:23:59,376 | INFO     | collected zombie processes
[2025-04-28 12:24:18] 2025-04-28 16:23:59,377 | INFO     | will attempt to kill all subprocesses of pid=15801
[2025-04-28 12:24:18] 2025-04-28 16:23:59,468 | INFO     | process IDs to be killed: [15801] (in reverse order)
[2025-04-28 12:24:18] 2025-04-28 16:23:59,543 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 12:24:18] 2025-04-28 16:23:59,543 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 12:24:18] 2025-04-28 16:23:59,547 | INFO     | did not find any defunct processes belonging to 15801
[2025-04-28 12:24:18] 2025-04-28 16:23:59,550 | INFO     | did not find any defunct processes belonging to 15801
[2025-04-28 12:24:18] 2025-04-28 16:23:59,550 | INFO     | ready for new job
[2025-04-28 12:24:18] 2025-04-28 16:23:59,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 12:24:18] 2025-04-28 16:23:59,551 | INFO     | **************************************
[2025-04-28 12:24:18] 2025-04-28 16:23:59,551 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 12:24:18] 2025-04-28 16:23:59,551 | INFO     | **************************************
[2025-04-28 12:24:18] 2025-04-28 16:23:59,552 | INFO     | 
[2025-04-28 12:24:18] 2025-04-28 16:23:59,552 | INFO     | architecture information:
[2025-04-28 12:24:18] 2025-04-28 16:23:59,553 | INFO     | executing command: cat /etc/os-release
[2025-04-28 12:24:18] 2025-04-28 16:23:59,566 | INFO     | cat /etc/os-release:
[2025-04-28 12:24:18] NAME="CentOS Linux"
[2025-04-28 12:24:18] VERSION="7 (Core)"
[2025-04-28 12:24:18] ID="centos"
[2025-04-28 12:24:18] ID_LIKE="rhel fedora"
[2025-04-28 12:24:18] VERSION_ID="7"
[2025-04-28 12:24:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 12:24:18] ANSI_COLOR="0;31"
[2025-04-28 12:24:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 12:24:18] HOME_URL="https://www.centos.org/"
[2025-04-28 12:24:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 12:24:18] 
[2025-04-28 12:24:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 12:24:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 12:24:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 12:24:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 12:24:18] 
[2025-04-28 12:24:18] 2025-04-28 16:23:59,566 | INFO     | **************************************
[2025-04-28 12:24:18] 2025-04-28 16:24:00,069 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-28 12:24:18] 2025-04-28 16:24:00,085 | INFO     | sufficient remaining disk space (29386342400 B)
[2025-04-28 12:24:18] 2025-04-28 16:24:00,085 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 12:24:18] 2025-04-28 16:24:00,085 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 12:24:18] 2025-04-28 16:24:00,085 | INFO     | update_server=False
[2025-04-28 12:24:18] 2025-04-28 16:24:00,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 12:24:18] 2025-04-28 16:24:00,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 12:24:18] 2025-04-28 16:24:00,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 12:24:18] 2025-04-28 16:24:00,103 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 12:24:18] 2025-04-28 16:24:00,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 12:24:18] 2025-04-28 16:24:00,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 12:24:18] 2025-04-28 16:24:00,664 | INFO     | all data control threads have been joined
[2025-04-28 12:24:18] 2025-04-28 16:24:00,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 12:24:18] 2025-04-28 16:24:00,804 | INFO     | aborting loop
[2025-04-28 12:24:18] 2025-04-28 16:24:01,091 | INFO     | [job] retrieve thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:01,092 | INFO     | [job] queue monitor thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:01,153 | INFO     | all job control threads have been joined
[2025-04-28 12:24:18] 2025-04-28 16:24:01,195 | INFO     | all payload control threads have been joined
[2025-04-28 12:24:18] 2025-04-28 16:24:01,617 | INFO     | [payload] failed_post thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:01,669 | INFO     | [data] control thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:01,806 | INFO     | [job] job monitor thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:01,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 12:24:18] 2025-04-28 16:24:02,091 | INFO     | [data] copytool_out thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:02,158 | INFO     | [job] control thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:02,200 | INFO     | [payload] control thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:02,210 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:02,215 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:02,221 | INFO     | [job] validate thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:02,288 | INFO     | [data] copytool_in thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:02,389 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:02,448 | INFO     | [payload] validate_post thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:05,842 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:10,862 | INFO     | job.realtimelogging is not enabled
[2025-04-28 12:24:18] 2025-04-28 16:24:11,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 12:24:18] 2025-04-28 16:24:12,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433816696640)>', '<ExcThread(monitor, started 140432897971968)>']
[2025-04-28 12:24:18] 2025-04-28 16:24:13,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 12:24:18] 2025-04-28 16:24:13,159 | INFO     | [monitor] control thread has ended
[2025-04-28 12:24:18] 2025-04-28 16:24:17,848 | INFO     | all workflow threads have been joined
[2025-04-28 12:24:18] 2025-04-28 16:24:17,848 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 12:24:18] 2025-04-28 16:24:17,849 | INFO     | traces error code: 0
[2025-04-28 12:24:18] 2025-04-28 16:24:17,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 12:24:18] 2025-04-28 16:24:17,945 [wrapper] ==== pilot stdout END ====
[2025-04-28 12:24:18] 2025-04-28 16:24:17,949 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 12:24:18] 2025-04-28 16:24:17,953 [wrapper] pilotpid: 9427
[2025-04-28 12:24:18] 2025-04-28 16:24:17,956 [wrapper] Pilot exit status: 0
[2025-04-28 12:24:18] 2025-04-28 16:24:17,970 [wrapper] pandaids: 6618056643
[2025-04-28 12:24:18] 2025-04-28 16:24:18,003 [wrapper] cleanup supervisor_pilot 16299 9428
[2025-04-28 12:24:18] 2025-04-28 16:24:18,007 [wrapper] Test setup, not cleaning
[2025-04-28 12:24:18] 2025-04-28 16:24:18,010 [wrapper] apfmon messages muted
[2025-04-28 12:24:18] 2025-04-28 16:24:18,014 [wrapper] ==== wrapper stdout END ====
[2025-04-28 12:24:18] 2025-04-28 16:24:18,018 [wrapper] ==== wrapper stderr END ====
[2025-04-28 12:24:18]  *** Error codes and diagnostics ***
[2025-04-28 12:24:18]     "exeErrorCode": 0,
[2025-04-28 12:24:18]     "exeErrorDiag": "",
[2025-04-28 12:24:18]     "pilotErrorCode": 0,
[2025-04-28 12:24:18]     "pilotErrorDiag": "",
[2025-04-28 12:24:18]  *** Listing of results directory ***
[2025-04-28 12:24:18] total 420828
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas    495897 Apr 27 20:54 pilot3.tar.gz
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas      5111 Apr 27 21:08 queuedata.json
[2025-04-28 12:24:18] -rwx------ 1 boincer umatlas     37140 Apr 27 21:08 runpilot2-wrapper.sh
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas       100 Apr 28 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 12:24:18] -rwxr-xr-x 1 boincer umatlas      7986 Apr 28 10:50 run_atlas
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas       105 Apr 28 10:50 job.xml
[2025-04-28 12:24:18] -rw-r--r-- 2 boincer umatlas 223706732 Apr 28 10:50 EVNT.44292255._003046.pool.root.1
[2025-04-28 12:24:18] -rw-r--r-- 2 boincer umatlas     17569 Apr 28 10:50 start_atlas.sh
[2025-04-28 12:24:18] drwxrwx--x 2 boincer umatlas      4096 Apr 28 10:50 shared
[2025-04-28 12:24:18] -rw-r--r-- 2 boincer umatlas    508881 Apr 28 10:50 input.tar.gz
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas         0 Apr 28 10:50 boinc_lockfile
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas      2551 Apr 28 10:50 pandaJob.out
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas       424 Apr 28 10:50 setup.sh.local
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas    994636 Apr 28 10:50 agis_schedconf.cvmfs.json
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas   1596659 Apr 28 10:50 agis_ddmendpoints.agis.ALL.json
[2025-04-28 12:24:18] drwx------ 4 boincer umatlas      4096 Apr 28 10:50 pilot3
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas      5868 Apr 28 12:20 init_data.xml
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas 201578487 Apr 28 12:23 HITS.44292257._026515.pool.root.1
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas       529 Apr 28 12:23 boinc_task_state.xml
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas      1057 Apr 28 12:23 memory_monitor_summary.json
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas        95 Apr 28 12:23 pilot_heartbeat.json
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas    375798 Apr 28 12:23 log.44292257._026515.job.log.tgz.1
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas        27 Apr 28 12:23 wrapper_checkpoint.txt
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas      8192 Apr 28 12:23 boinc_mmap_file
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas      7762 Apr 28 12:23 heartbeat.json
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas      4425 Apr 28 12:24 pilotlog.txt
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas    527088 Apr 28 12:24 log.44292257._026515.job.log.1
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas       357 Apr 28 12:24 output.list
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas       620 Apr 28 12:24 runtime_log
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas    921600 Apr 28 12:24 result.tar.gz
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas       658 Apr 28 12:24 t96LDmk9RT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm2ICLDmxkN2rm.diag
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas     11015 Apr 28 12:24 runtime_log.err
[2025-04-28 12:24:18] -rw-r--r-- 1 boincer umatlas     21572 Apr 28 12:24 stderr.txt
[2025-04-28 12:24:18] HITS file was successfully produced:
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas 201578487 Apr 28 12:23 shared/HITS.pool.root.1
[2025-04-28 12:24:18]  *** Contents of shared directory: ***
[2025-04-28 12:24:18] total 416744
[2025-04-28 12:24:18] -rw-r--r-- 2 boincer umatlas 223706732 Apr 28 10:50 ATLAS.root_0
[2025-04-28 12:24:18] -rw-r--r-- 2 boincer umatlas     17569 Apr 28 10:50 start_atlas.sh
[2025-04-28 12:24:18] -rw-r--r-- 2 boincer umatlas    508881 Apr 28 10:50 input.tar.gz
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas 201578487 Apr 28 12:23 HITS.pool.root.1
[2025-04-28 12:24:18] -rw------- 1 boincer umatlas    921600 Apr 28 12:24 result.tar.gz
12:24:20 (5490): run_atlas exited; CPU time 52734.732939
12:24:20 (5490): called boinc_finish(0)

</stderr_txt>
]]>

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