Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:52:38 (1574313): wrapper (7.7.26015): starting
09:52:38 (1574313): wrapper: running run_atlas (--nthreads 12)
[2025-04-28 09:52:38] Arguments: --nthreads 12
[2025-04-28 09:52:38] Threads: 12
[2025-04-28 09:52:38] Checking for CVMFS
[2025-04-28 09:52:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 09:52:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 09:52:39] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 09:52:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 09:52:40] 2.11.5.0 2772 35991 233708 145380 3 312 42901373 45568001 11678 130560 0 233000858 99.777 199672877 29151 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-28 09:52:40] CVMFS is ok
[2025-04-28 09:52:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 09:52:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-28 09:52:40] Further information can be found at the LHC@home message board.
[2025-04-28 09:52:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 09:52:40] Checking for apptainer binary...
[2025-04-28 09:52:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 09:52:40] Running /usr/bin/apptainer --version
[2025-04-28 09:52:40] apptainer version 1.3.5-1.el9
[2025-04-28 09:52:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 09:52:40] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0154.triumf.lcg
[2025-04-28 09:52:40] apptainer works
[2025-04-28 09:52:40] Set ATHENA_PROC_NUMBER=12
[2025-04-28 09:52:40] Set ATHENA_CORE_NUMBER=12
[2025-04-28 09:52:40] Starting ATLAS job with PandaID=6618577424
[2025-04-28 09:52:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 11:57:33]  *** The last 200 lines of the pilot log: ***
[2025-04-28 11:57:33] 2025-04-28 18:57:18,794 | INFO     | sum of square deviations: 563063803.4754107
[2025-04-28 11:57:33] 2025-04-28 18:57:18,836 | INFO     | sum of deviations: 49450263221.082
[2025-04-28 11:57:33] 2025-04-28 18:57:18,836 | INFO     | mean x: 1745862901.0655737
[2025-04-28 11:57:33] 2025-04-28 18:57:18,836 | INFO     | mean y: 2589585.1147540985
[2025-04-28 11:57:33] 2025-04-28 18:57:18,836 | INFO     | -- intersect: -153325291682.93533
[2025-04-28 11:57:33] 2025-04-28 18:57:18,836 | INFO     | intersect: -153325291682.93533
[2025-04-28 11:57:33] 2025-04-28 18:57:18,837 | INFO     | chi2: 5.058907894002208
[2025-04-28 11:57:33] 2025-04-28 18:57:18,837 | INFO     | sum of square deviations: 496633734.7692302
[2025-04-28 11:57:33] 2025-04-28 18:57:18,837 | INFO     | sum of deviations: 55543603381.974335
[2025-04-28 11:57:33] 2025-04-28 18:57:18,837 | INFO     | mean x: 1745862748.5641026
[2025-04-28 11:57:33] 2025-04-28 18:57:18,837 | INFO     | mean y: 2602937.8034188035
[2025-04-28 11:57:33] 2025-04-28 18:57:18,837 | INFO     | -- intersect: -195254990891.71698
[2025-04-28 11:57:33] 2025-04-28 18:57:18,837 | INFO     | intersect: -195254990891.71698
[2025-04-28 11:57:33] 2025-04-28 18:57:18,838 | INFO     | chi2: 4.358541201334081
[2025-04-28 11:57:33] 2025-04-28 18:57:18,838 | INFO     | current chi2=4.358541201334081 (change=13.844227002007194 %)
[2025-04-28 11:57:33] 2025-04-28 18:57:18,838 | INFO     | right removable region: 116
[2025-04-28 11:57:33] 2025-04-28 18:57:18,838 | INFO     | sum of square deviations: 496613604.3076926
[2025-04-28 11:57:33] 2025-04-28 18:57:18,838 | INFO     | sum of deviations: 18454824435.666676
[2025-04-28 11:57:33] 2025-04-28 18:57:18,838 | INFO     | mean x: 1745863053.5897436
[2025-04-28 11:57:33] 2025-04-28 18:57:18,839 | INFO     | mean y: 2660374.5555555555
[2025-04-28 11:57:33] 2025-04-28 18:57:18,839 | INFO     | -- intersect: -64875941144.2884
[2025-04-28 11:57:33] 2025-04-28 18:57:18,839 | INFO     | intersect: -64875941144.2884
[2025-04-28 11:57:33] 2025-04-28 18:57:18,839 | INFO     | chi2: 2.6091553698763787
[2025-04-28 11:57:33] 2025-04-28 18:57:18,839 | INFO     | current chi2=2.6091553698763787 (change=48.42453303074033 %)
[2025-04-28 11:57:33] 2025-04-28 18:57:18,839 | INFO     | sum of square deviations: 435605367.49107105
[2025-04-28 11:57:33] 2025-04-28 18:57:18,839 | INFO     | sum of deviations: -3555206746.000003
[2025-04-28 11:57:33] 2025-04-28 18:57:18,840 | INFO     | mean x: 1745863206.1160715
[2025-04-28 11:57:33] 2025-04-28 18:57:18,840 | INFO     | mean y: 2715426.0
[2025-04-28 11:57:33] 2025-04-28 18:57:18,840 | INFO     | -- intersect: 14251632246.576777
[2025-04-28 11:57:33] 2025-04-28 18:57:18,840 | INFO     | intersect: 14251632246.576777
[2025-04-28 11:57:33] 2025-04-28 18:57:18,884 | INFO     | chi2: 1.434319179204873
[2025-04-28 11:57:33] 2025-04-28 18:57:18,884 | INFO     | current chi2=1.434319179204873 (change=45.0274523409148 %)
[2025-04-28 11:57:33] 2025-04-28 18:57:18,884 | INFO     | sum of square deviations: 379806530.50467217
[2025-04-28 11:57:33] 2025-04-28 18:57:18,885 | INFO     | sum of deviations: -17137441918.04673
[2025-04-28 11:57:33] 2025-04-28 18:57:18,885 | INFO     | mean x: 1745863358.6448598
[2025-04-28 11:57:33] 2025-04-28 18:57:18,885 | INFO     | mean y: 2752044.551401869
[2025-04-28 11:57:33] 2025-04-28 18:57:18,885 | INFO     | -- intersect: 78778732715.2003
[2025-04-28 11:57:33] 2025-04-28 18:57:18,885 | INFO     | intersect: 78778732715.2003
[2025-04-28 11:57:33] 2025-04-28 18:57:18,885 | INFO     | chi2: 0.7974048931283538
[2025-04-28 11:57:33] 2025-04-28 18:57:18,885 | INFO     | current chi2=0.7974048931283538 (change=44.40533845678603 %)
[2025-04-28 11:57:33] 2025-04-28 18:57:18,886 | INFO     | sum of square deviations: 328984530.82352954
[2025-04-28 11:57:33] 2025-04-28 18:57:18,886 | INFO     | sum of deviations: -13248388313.941177
[2025-04-28 11:57:33] 2025-04-28 18:57:18,886 | INFO     | mean x: 1745863511.1764705
[2025-04-28 11:57:33] 2025-04-28 18:57:18,886 | INFO     | mean y: 2740343.9411764704
[2025-04-28 11:57:33] 2025-04-28 18:57:18,886 | INFO     | -- intersect: 70309625841.8911
[2025-04-28 11:57:33] 2025-04-28 18:57:18,886 | INFO     | intersect: 70309625841.8911
[2025-04-28 11:57:33] 2025-04-28 18:57:18,886 | INFO     | chi2: 0.7854089224560055
[2025-04-28 11:57:33] 2025-04-28 18:57:18,886 | INFO     | current chi2=0.7854089224560055 (change=1.504376355816698 %)
[2025-04-28 11:57:33] 2025-04-28 18:57:18,886 | INFO     | left removable region: 40
[2025-04-28 11:57:33] 2025-04-28 18:57:18,887 | INFO     | sum of square deviations: 136055702.10526344
[2025-04-28 11:57:33] 2025-04-28 18:57:18,887 | INFO     | sum of deviations: -613124558.1578948
[2025-04-28 11:57:33] 2025-04-28 18:57:18,887 | INFO     | mean x: 1745863938.1578948
[2025-04-28 11:57:33] 2025-04-28 18:57:18,887 | INFO     | mean y: 2745356.013157895
[2025-04-28 11:57:33] 2025-04-28 18:57:18,887 | INFO     | -- intersect: 7870346927.454028
[2025-04-28 11:57:33] 2025-04-28 18:57:18,887 | INFO     | intersect: 7870346927.454028
[2025-04-28 11:57:33] 2025-04-28 18:57:18,887 | INFO     | chi2: 0.00041880004344164594
[2025-04-28 11:57:33] 2025-04-28 18:57:18,887 | INFO     | -- intersect: 7870346927.454028
[2025-04-28 11:57:33] 2025-04-28 18:57:18,887 | INFO     | current memory leak: -4.51 B/s (using 76 data points, chi2=0.00)
[2025-04-28 11:57:33] 2025-04-28 18:57:18,888 | INFO     | ..............................
[2025-04-28 11:57:33] 2025-04-28 18:57:18,919 | INFO     | . Timing measurements:
[2025-04-28 11:57:33] 2025-04-28 18:57:18,919 | INFO     | . get job = 0 s
[2025-04-28 11:57:33] 2025-04-28 18:57:18,919 | INFO     | . initial setup = 3 s
[2025-04-28 11:57:33] 2025-04-28 18:57:18,919 | INFO     | . payload setup = 6 s
[2025-04-28 11:57:33] 2025-04-28 18:57:18,919 | INFO     | . stage-in = 0 s
[2025-04-28 11:57:33] 2025-04-28 18:57:18,919 | INFO     | . payload execution = 7410 s
[2025-04-28 11:57:33] 2025-04-28 18:57:18,919 | INFO     | . stage-out = 1 s
[2025-04-28 11:57:33] 2025-04-28 18:57:18,920 | INFO     | . log creation = 0 s
[2025-04-28 11:57:33] 2025-04-28 18:57:18,920 | INFO     | ..............................
[2025-04-28 11:57:33] 2025-04-28 18:57:19,213 | INFO     | 
[2025-04-28 11:57:33] 2025-04-28 18:57:19,213 | INFO     | job summary report
[2025-04-28 11:57:33] 2025-04-28 18:57:19,213 | INFO     | --------------------------------------------------
[2025-04-28 11:57:33] 2025-04-28 18:57:19,213 | INFO     | PanDA job id: 6618577424
[2025-04-28 11:57:33] 2025-04-28 18:57:19,213 | INFO     | task id: 44292257
[2025-04-28 11:57:33] 2025-04-28 18:57:19,213 | INFO     | errors: (none)
[2025-04-28 11:57:33] 2025-04-28 18:57:19,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | pilot state: finished 
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | transexitcode: 0
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | exeerrorcode: 0
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | exeerrordiag: 
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | exitcode: 0
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | exitmsg: OK
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | cpuconsumptiontime: 34919 s
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | nevents: 400
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | neventsw: 0
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | pid: 1584252
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | pgrp: 1584252
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | corecount: 12
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | event service: False
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | sizes: {0: 2393559, 1: 2393758, 7: 2393964, 11: 2393992, 7421: 2421323, 7423: 2430442, 7439: 2430556}
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | --------------------------------------------------
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | 
[2025-04-28 11:57:33] 2025-04-28 18:57:19,214 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-28 11:57:33] 2025-04-28 18:57:19,331 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,333 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 11:57:33] 2025-04-28 18:57:19,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,333 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 11:57:33] 2025-04-28 18:57:19,333 | INFO     | job 6618577424 has completed (purged errors)
[2025-04-28 11:57:33] 2025-04-28 18:57:19,333 | INFO     | overall cleanup function is called
[2025-04-28 11:57:33] 2025-04-28 18:57:20,358 | INFO     | --- collectZombieJob: --- 10, [1584252]
[2025-04-28 11:57:33] 2025-04-28 18:57:20,358 | INFO     | zombie collector waiting for pid 1584252
[2025-04-28 11:57:33] 2025-04-28 18:57:20,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 11:57:33] 2025-04-28 18:57:20,358 | INFO     | collected zombie processes
[2025-04-28 11:57:33] 2025-04-28 18:57:20,358 | INFO     | will attempt to kill all subprocesses of pid=1584252
[2025-04-28 11:57:33] 2025-04-28 18:57:21,044 | INFO     | process IDs to be killed: [1584252] (in reverse order)
[2025-04-28 11:57:33] 2025-04-28 18:57:21,114 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 11:57:33] 2025-04-28 18:57:21,115 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 11:57:33] 2025-04-28 18:57:21,126 | INFO     | did not find any defunct processes belonging to 1584252
[2025-04-28 11:57:33] 2025-04-28 18:57:21,155 | INFO     | did not find any defunct processes belonging to 1584252
[2025-04-28 11:57:33] 2025-04-28 18:57:21,155 | INFO     | ready for new job
[2025-04-28 11:57:33] 2025-04-28 18:57:21,155 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 11:57:33] 2025-04-28 18:57:21,157 | INFO     | **************************************
[2025-04-28 11:57:33] 2025-04-28 18:57:21,163 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 11:57:33] 2025-04-28 18:57:21,163 | INFO     | **************************************
[2025-04-28 11:57:33] 2025-04-28 18:57:21,163 | INFO     | 
[2025-04-28 11:57:33] 2025-04-28 18:57:21,166 | INFO     | architecture information:
[2025-04-28 11:57:33] 2025-04-28 18:57:21,177 | INFO     | executing command: cat /etc/os-release
[2025-04-28 11:57:33] 2025-04-28 18:57:21,276 | INFO     | cat /etc/os-release:
[2025-04-28 11:57:33] NAME="CentOS Linux"
[2025-04-28 11:57:33] VERSION="7 (Core)"
[2025-04-28 11:57:33] ID="centos"
[2025-04-28 11:57:33] ID_LIKE="rhel fedora"
[2025-04-28 11:57:33] VERSION_ID="7"
[2025-04-28 11:57:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 11:57:33] ANSI_COLOR="0;31"
[2025-04-28 11:57:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 11:57:33] HOME_URL="https://www.centos.org/"
[2025-04-28 11:57:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 11:57:33] 
[2025-04-28 11:57:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 11:57:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 11:57:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 11:57:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 11:57:33] 
[2025-04-28 11:57:33] 2025-04-28 18:57:21,276 | INFO     | **************************************
[2025-04-28 11:57:33] 2025-04-28 18:57:21,788 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-28 11:57:33] 2025-04-28 18:57:21,823 | INFO     | sufficient remaining disk space (1952990625792 B)
[2025-04-28 11:57:33] 2025-04-28 18:57:21,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 11:57:33] 2025-04-28 18:57:21,824 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 11:57:33] 2025-04-28 18:57:21,824 | INFO     | update_server=False
[2025-04-28 11:57:33] 2025-04-28 18:57:21,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 11:57:33] 2025-04-28 18:57:21,955 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 11:57:33] 2025-04-28 18:57:21,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 11:57:33] 2025-04-28 18:57:21,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 11:57:33] 2025-04-28 18:57:22,125 | INFO     | all data control threads have been joined
[2025-04-28 11:57:33] 2025-04-28 18:57:22,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 11:57:33] 2025-04-28 18:57:22,452 | INFO     | aborting loop
[2025-04-28 11:57:33] 2025-04-28 18:57:22,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 11:57:33] 2025-04-28 18:57:22,685 | INFO     | all job control threads have been joined
[2025-04-28 11:57:33] 2025-04-28 18:57:22,754 | INFO     | all payload control threads have been joined
[2025-04-28 11:57:33] 2025-04-28 18:57:22,830 | INFO     | [job] retrieve thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:23,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 11:57:33] 2025-04-28 18:57:23,131 | INFO     | [data] control thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:23,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:23,458 | INFO     | [job] job monitor thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:23,691 | INFO     | [job] control thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:23,760 | INFO     | [payload] control thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:23,944 | INFO     | [payload] failed_post thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:23,989 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:24,088 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:24,102 | INFO     | [payload] validate_post thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:24,113 | INFO     | [job] validate thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:24,204 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:24,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 11:57:33] 2025-04-28 18:57:24,319 | INFO     | [data] copytool_in thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:25,089 | INFO     | [data] copytool_out thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:25,241 | INFO     | [job] queue monitor thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:26,690 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 11:57:33] 2025-04-28 18:57:27,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440678995776)>', '<ExcThread(monitor, started 140439877293824)>']
[2025-04-28 11:57:33] 2025-04-28 18:57:27,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 11:57:33] 2025-04-28 18:57:27,991 | INFO     | [monitor] control thread has ended
[2025-04-28 11:57:33] 2025-04-28 18:57:32,059 | INFO     | all workflow threads have been joined
[2025-04-28 11:57:33] 2025-04-28 18:57:32,059 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 11:57:33] 2025-04-28 18:57:32,059 | INFO     | traces error code: 0
[2025-04-28 11:57:33] 2025-04-28 18:57:32,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 11:57:33] 2025-04-28 18:57:32,435 [wrapper] ==== pilot stdout END ====
[2025-04-28 11:57:33] 2025-04-28 18:57:32,441 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 11:57:33] 2025-04-28 18:57:32,444 [wrapper] pilotpid: 1577912
[2025-04-28 11:57:33] 2025-04-28 18:57:32,446 [wrapper] Pilot exit status: 0
[2025-04-28 11:57:33] 2025-04-28 18:57:32,570 [wrapper] pandaids: 6618577424
[2025-04-28 11:57:33] 2025-04-28 18:57:32,656 [wrapper] cleanup supervisor_pilot 1919921 1577913
[2025-04-28 11:57:33] 2025-04-28 18:57:32,658 [wrapper] Test setup, not cleaning
[2025-04-28 11:57:33] 2025-04-28 18:57:32,660 [wrapper] apfmon messages muted
[2025-04-28 11:57:33] 2025-04-28 18:57:32,662 [wrapper] ==== wrapper stdout END ====
[2025-04-28 11:57:33] 2025-04-28 18:57:32,664 [wrapper] ==== wrapper stderr END ====
[2025-04-28 11:57:33]  *** Error codes and diagnostics ***
[2025-04-28 11:57:33]     "exeErrorCode": 0,
[2025-04-28 11:57:33]     "exeErrorDiag": "",
[2025-04-28 11:57:33]     "pilotErrorCode": 0,
[2025-04-28 11:57:33]     "pilotErrorDiag": "",
[2025-04-28 11:57:33]  *** Listing of results directory ***
[2025-04-28 11:57:33] total 413192
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc      5111 Apr 28 00:57 queuedata.json
[2025-04-28 11:57:33] -rwx------. 1 boinc boinc     37140 Apr 28 00:57 runpilot2-wrapper.sh
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc    495897 Apr 28 00:57 pilot3.tar.gz
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc       100 Apr 28 09:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 11:57:33] -rwxr-xr-x. 1 boinc boinc      7986 Apr 28 09:52 run_atlas
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc       105 Apr 28 09:52 job.xml
[2025-04-28 11:57:33] -rw-r--r--. 2 boinc boinc 220321063 Apr 28 09:52 EVNT.44292255._003181.pool.root.1
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc      6598 Apr 28 09:52 init_data.xml
[2025-04-28 11:57:33] -rw-r--r--. 2 boinc boinc     17569 Apr 28 09:52 start_atlas.sh
[2025-04-28 11:57:33] drwxrwx--x. 2 boinc boinc      4096 Apr 28 09:52 shared
[2025-04-28 11:57:33] -rw-r--r--. 2 boinc boinc    508881 Apr 28 09:52 input.tar.gz
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc         0 Apr 28 09:52 boinc_lockfile
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc      2552 Apr 28 09:52 pandaJob.out
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc       424 Apr 28 09:52 setup.sh.local
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc    994409 Apr 28 09:53 agis_schedconf.cvmfs.json
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc   1596659 Apr 28 09:53 agis_ddmendpoints.agis.ALL.json
[2025-04-28 11:57:33] drwx------. 4 boinc boinc      4096 Apr 28 09:53 pilot3
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc 196811375 Apr 28 11:56 HITS.44292257._030101.pool.root.1
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc       530 Apr 28 11:56 boinc_task_state.xml
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc      1051 Apr 28 11:56 memory_monitor_summary.json
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc    389553 Apr 28 11:57 log.44292257._030101.job.log.tgz.1
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc      8192 Apr 28 11:57 boinc_mmap_file
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc        27 Apr 28 11:57 wrapper_checkpoint.txt
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc        95 Apr 28 11:57 pilot_heartbeat.json
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc      7732 Apr 28 11:57 heartbeat.json
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc      4352 Apr 28 11:57 pilotlog.txt
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc    673255 Apr 28 11:57 log.44292257._030101.job.log.1
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc       357 Apr 28 11:57 output.list
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc       620 Apr 28 11:57 runtime_log
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc   1085440 Apr 28 11:57 result.tar.gz
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc       660 Apr 28 11:57 xlbKDmMYYT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQPuLDmY9LsDo.diag
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc     11144 Apr 28 11:57 runtime_log.err
[2025-04-28 11:57:33] -rw-r--r--. 1 boinc boinc     20931 Apr 28 11:57 stderr.txt
[2025-04-28 11:57:33] HITS file was successfully produced:
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc 196811375 Apr 28 11:56 shared/HITS.pool.root.1
[2025-04-28 11:57:33]  *** Contents of shared directory: ***
[2025-04-28 11:57:33] total 408948
[2025-04-28 11:57:33] -rw-r--r--. 2 boinc boinc 220321063 Apr 28 09:52 ATLAS.root_0
[2025-04-28 11:57:33] -rw-r--r--. 2 boinc boinc     17569 Apr 28 09:52 start_atlas.sh
[2025-04-28 11:57:33] -rw-r--r--. 2 boinc boinc    508881 Apr 28 09:52 input.tar.gz
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc 196811375 Apr 28 11:56 HITS.pool.root.1
[2025-04-28 11:57:33] -rw-------. 1 boinc boinc   1085440 Apr 28 11:57 result.tar.gz
11:57:34 (1574313): run_atlas exited; CPU time 35022.354627
11:57:34 (1574313): called boinc_finish(0)

</stderr_txt>
]]>

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