Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-28 12:12:18 (973425): Detected: vboxwrapper 26206
2025-04-28 12:12:18 (973425): Detected: BOINC client v8.2.1
2025-04-28 12:12:19 (973425): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-04-28 12:12:19 (973425): Successfully copied 'init_data.xml' to the shared directory.
2025-04-28 12:12:19 (973425): Create VM. (boinc_fe0099684807a39f, slot#9)
2025-04-28 12:12:20 (973425): Setting Memory Size for VM. (4800MB)
2025-04-28 12:12:20 (973425): Setting CPU Count for VM. (8)
2025-04-28 12:12:20 (973425): Setting Chipset Options for VM.
2025-04-28 12:12:20 (973425): Setting Graphics Controller Options for VM.
2025-04-28 12:12:21 (973425): Setting Boot Options for VM.
2025-04-28 12:12:21 (973425): Setting Network Configuration for NAT.
2025-04-28 12:12:21 (973425): Enabling VM Network Access.
2025-04-28 12:12:21 (973425): Disabling USB Support for VM.
2025-04-28 12:12:21 (973425): Disabling COM Port Support for VM.
2025-04-28 12:12:21 (973425): Disabling LPT Port Support for VM.
2025-04-28 12:12:22 (973425): Disabling Audio Support for VM.
2025-04-28 12:12:22 (973425): Disabling Clipboard Support for VM.
2025-04-28 12:12:22 (973425): Disabling Drag and Drop Support for VM.
2025-04-28 12:12:22 (973425): Adding storage controller(s) to VM.
2025-04-28 12:12:22 (973425): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-28 12:12:24 (973425): Adding VirtualBox Guest Additions to VM.
2025-04-28 12:12:24 (973425): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-28 12:12:24 (973425): forwarding host port 36147 to guest port 80
2025-04-28 12:12:25 (973425): Enabling remote desktop for VM.
2025-04-28 12:12:25 (973425): Required extension pack not installed, remote desktop not enabled.
2025-04-28 12:12:25 (973425): Enabling shared directory for VM.
2025-04-28 12:12:25 (973425): Starting VM using VBoxManage interface. (boinc_fe0099684807a39f, slot#9)
2025-04-28 12:12:26 (973425): Successfully started VM. (PID = '974023')
2025-04-28 12:12:26 (973425): Reporting VM Process ID to BOINC.
2025-04-28 12:12:26 (973425): Guest Log: BIOS: VirtualBox 7.1.8
2025-04-28 12:12:26 (973425): Guest Log: CPUID EDX: 0x178bfbff
2025-04-28 12:12:26 (973425): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-28 12:12:26 (973425): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-28 12:12:26 (973425): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-28 12:12:26 (973425): Detected: Web Application Enabled (http://localhost:36147)
2025-04-28 12:12:26 (973425): Preference change detected
2025-04-28 12:12:26 (973425): Setting CPU throttle for VM. (100%)
2025-04-28 12:12:26 (973425): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-28 12:12:28 (973425): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-28 12:12:28 (973425): Guest Log: BIOS: Booting from Hard Disk...
2025-04-28 12:12:31 (973425): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-28 12:12:31 (973425): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-28 12:12:31 (973425): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-28 12:12:39 (973425): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-28 12:12:39 (973425): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-28 12:12:47 (973425): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-28 12:12:47 (973425): Guest Log: 00:00:00.000179 main     Log opened 2025-04-28T10:12:44.601086000Z
2025-04-28 12:12:47 (973425): Guest Log: 00:00:00.000273 main     OS Product: Linux
2025-04-28 12:12:47 (973425): Guest Log: 00:00:00.000301 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-28 12:12:47 (973425): Guest Log: 00:00:00.000341 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-28 12:12:47 (973425): Guest Log: 00:00:00.000367 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-28 12:12:47 (973425): Guest Log: 00:00:00.000367 main     Process ID: 1379
2025-04-28 12:12:47 (973425): Guest Log: 00:00:00.000368 main     Package type: LINUX_64BITS_GENERIC
2025-04-28 12:12:47 (973425): Guest Log: 00:00:00.001489 main     5.2.32 r132073 started. Verbose level = 0
2025-04-28 12:12:47 (973425): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-28 12:12:47 (973425): Guest Log: [INFO] Mounting shared directory
2025-04-28 12:12:47 (973425): Guest Log: [INFO] Checking for init_data.xml
2025-04-28 12:12:54 (973425): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-28 12:12:54 (973425): Guest Log: [INFO] Detected branch: prod
2025-04-28 12:12:55 (973425): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-28 12:12:55 (973425): Guest Log: Copying input files
2025-04-28 12:12:56 (973425): Guest Log: Copied input files into RunAtlas.
2025-04-28 12:12:56 (973425): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-28 12:12:56 (973425): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-28 12:12:56 (973425): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-28 12:12:56 (973425): Guest Log: Further information can be found at the LHC@home message board.
2025-04-28 12:13:11 (973425): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-28 12:13:12 (973425): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-28 12:13:12 (973425): Guest Log: 2.6.3.0 1657 0 30176 145369 4 1 3119946 4096000 0 65024 0 0 n/a 1171 188 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-28 12:13:14 (973425): Guest Log: copied the webapp to /var/www
2025-04-28 12:13:14 (973425): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-28 12:13:14 (973425): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-28 12:13:14 (973425): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-28 12:13:14 (973425): Guest Log:  *** Starting ATLAS job. (PandaID=6618442881 taskID=44270688) ***
2025-04-28 13:51:27 (973425): Status Report: Elapsed Time: '6000.000000'
2025-04-28 13:51:27 (973425): Status Report: CPU Time: '33703.350000'
2025-04-28 15:30:28 (973425): Status Report: Elapsed Time: '12000.000000'
2025-04-28 15:30:28 (973425): Status Report: CPU Time: '74020.500000'
2025-04-28 17:09:29 (973425): Status Report: Elapsed Time: '18000.000000'
2025-04-28 17:09:29 (973425): Status Report: CPU Time: '114372.480000'
2025-04-28 18:14:22 (973425): Guest Log:  *** Job finished ***
2025-04-28 18:14:22 (973425): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:08,168 | INFO     | [job] create_data_payload thread has finished
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:09,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:13,356 | INFO     | [data] queue_monitor thread has finished
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:15,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140630141081408)>', '<ExcThread(monitor, started 140629526943488)>']
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:16,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:16,236 | INFO     | [monitor] control thread has ended
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,314 | INFO     | all workflow threads have been joined
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,314 | INFO     | end of generic workflow (traces error code: 0)
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,315 | INFO     | traces error code: 0
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,395 [wrapper] ==== pilot stdout END ====
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,400 [wrapper] ==== wrapper stdout RESUME ====
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,406 [wrapper] pilotpid: 6065
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,411 [wrapper] Pilot exit status: 0
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,562 [wrapper] pandaids: 6618442881
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,597 [wrapper] cleanup supervisor_pilot 23785 6066
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,604 [wrapper] Test setup, not cleaning
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,609 [wrapper] apfmon messages muted
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,615 [wrapper] ==== wrapper stdout END ====
2025-04-28 18:14:22 (973425): Guest Log: 2025-04-28 16:14:20,621 [wrapper] ==== wrapper stderr END ====
2025-04-28 18:14:22 (973425): Guest Log:  *** Error codes and diagnostics ***
2025-04-28 18:14:22 (973425): Guest Log:     "exeErrorCode": 0,
2025-04-28 18:14:22 (973425): Guest Log:     "exeErrorDiag": "",
2025-04-28 18:14:22 (973425): Guest Log:     "pilotErrorCode": 0,
2025-04-28 18:14:22 (973425): Guest Log:     "pilotErrorDiag": "",
2025-04-28 18:14:22 (973425): Guest Log:  *** Listing of results directory ***
2025-04-28 18:14:22 (973425): Guest Log: total 210236
2025-04-28 18:14:22 (973425): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 28 05:53 pilot3.tar.gz
2025-04-28 18:14:22 (973425): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 28 06:31 runpilot2-wrapper.sh
2025-04-28 18:14:22 (973425): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 28 06:31 queuedata.json
2025-04-28 18:14:22 (973425): Guest Log: -rw-r--r--. 1 atlas atlas    508844 Apr 28 10:12 input.tar.gz
2025-04-28 18:14:22 (973425): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 28 10:12 start_atlas.sh
2025-04-28 18:14:22 (973425): Guest Log: -rw-r--r--. 1 atlas atlas      9072 Apr 28 10:12 init_data.xml
2025-04-28 18:14:22 (973425): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 28 10:12 EVNT.44270686._000015.pool.root.1 -> /data/./ATLAS.root_0
2025-04-28 18:14:22 (973425): Guest Log: -rw-r--r--. 1 atlas atlas      2464 Apr 28 10:13 pandaJob.out
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas       424 Apr 28 10:13 setup.sh.local
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas    992198 Apr 28 10:16 agis_schedconf.cvmfs.json
2025-04-28 18:14:22 (973425): Guest Log: drwx------. 4 atlas atlas      4096 Apr 28 10:17 pilot3
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas 207258019 Apr 28 16:13 HITS.44270688._000352.pool.root.1
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas        95 Apr 28 16:13 pilot_heartbeat.json
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas      1035 Apr 28 16:13 memory_monitor_summary.json
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 28 16:13 agis_ddmendpoints.agis.ALL.json
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas    429900 Apr 28 16:13 log.44270688._000352.job.log.tgz.1
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas      7693 Apr 28 16:14 heartbeat.json
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 28 16:14 pilotlog.txt
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas   1695708 Apr 28 16:14 log.44270688._000352.job.log.1
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas       357 Apr 28 16:14 output.list
2025-04-28 18:14:22 (973425): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 28 16:14 runtime_log
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas   2140160 Apr 28 16:14 result.tar.gz
2025-04-28 18:14:22 (973425): Guest Log: -rw-r--r--. 1 atlas atlas     10971 Apr 28 16:14 runtime_log.err
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas       673 Apr 28 16:14 jZTNDmvCXT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmtCuLDmIfAQNo.diag
2025-04-28 18:14:22 (973425): Guest Log: Looking for outputfile HITS.44270688._000352.pool.root.1
2025-04-28 18:14:22 (973425): Guest Log: HITS file was successfully produced
2025-04-28 18:14:22 (973425): Guest Log: -rw-------. 1 atlas atlas 207258019 Apr 28 16:13 /home/atlas/RunAtlas/HITS.44270688._000352.pool.root.1
2025-04-28 18:14:22 (973425): Guest Log: Successfully finished the ATLAS job!
2025-04-28 18:14:22 (973425): Guest Log: Copying the results back to the shared directory!
2025-04-28 18:14:23 (973425): Guest Log:  *** Contents of shared directory: ***
2025-04-28 18:14:23 (973425): Guest Log: total 213096
2025-04-28 18:14:23 (973425): Guest Log: -rw-r--r--. 1 root root 215518230 Apr 28 10:12 ATLAS.root_0
2025-04-28 18:14:23 (973425): Guest Log: -rw-r--r--. 1 root root      9072 Apr 28 10:12 init_data.xml
2025-04-28 18:14:23 (973425): Guest Log: -rw-r--r--. 1 root root    508844 Apr 28 10:12 input.tar.gz
2025-04-28 18:14:23 (973425): Guest Log: -rw-r--r--. 1 root root   2140160 Apr 28 16:14 result.tar.gz
2025-04-28 18:14:23 (973425): Guest Log: -rw-r--r--. 1 root root     17569 Apr 28 10:12 start_atlas.sh
2025-04-28 18:14:23 (973425): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-28 18:14:23 (973425): VM Completion File Detected.
2025-04-28 18:14:23 (973425): Powering off VM.
2025-04-28 18:14:23 (973425): Successfully stopped VM.
2025-04-28 18:14:23 (973425): Deregistering VM. (boinc_fe0099684807a39f, slot#9)
2025-04-28 18:14:23 (973425): Removing network bandwidth throttle group from VM.
2025-04-28 18:14:23 (973425): Removing VM from VirtualBox.
18:14:28 (973425): called boinc_finish(0)

</stderr_txt>
]]>

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