Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:09:17 (1716093): wrapper (7.7.26015): starting
07:09:17 (1716093): wrapper: running run_atlas (--nthreads 8)
[2025-04-28 07:09:17] Arguments: --nthreads 8
[2025-04-28 07:09:17] Threads: 8
[2025-04-28 07:09:17] Checking for CVMFS
[2025-04-28 07:09:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 07:09:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 07:09:18] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 07:09:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 07:09:18] 2.11.3.0 22626 349387 174800 145374 3 415 34681222 45568001 6795 130560 0 1497964717 99.743 1333032293 21541 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-04-28 07:09:18] CVMFS is ok
[2025-04-28 07:09:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 07:09:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-28 07:09:18] Further information can be found at the LHC@home message board.
[2025-04-28 07:09:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 07:09:18] Checking for apptainer binary...
[2025-04-28 07:09:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 07:09:18] Running /usr/bin/apptainer --version
[2025-04-28 07:09:18] apptainer version 1.3.3-1.el9
[2025-04-28 07:09:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 07:09:18] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0003.triumf.lcg
[2025-04-28 07:09:18] apptainer works
[2025-04-28 07:09:18] Set ATHENA_PROC_NUMBER=8
[2025-04-28 07:09:18] Set ATHENA_CORE_NUMBER=8
[2025-04-28 07:09:18] Starting ATLAS job with PandaID=6618442889
[2025-04-28 07:09:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 11:17:06]  *** The last 200 lines of the pilot log: ***
[2025-04-28 11:17:06] 2025-04-28 18:16:41,689 | INFO     | sum of square deviations: 4449241812.427966
[2025-04-28 11:17:06] 2025-04-28 18:16:41,690 | INFO     | sum of deviations: 37814467561.55556
[2025-04-28 11:17:06] 2025-04-28 18:16:41,690 | INFO     | mean x: 1745856769.1028807
[2025-04-28 11:17:06] 2025-04-28 18:16:41,690 | INFO     | mean y: 2074082.7777777778
[2025-04-28 11:17:06] 2025-04-28 18:16:41,690 | INFO     | -- intersect: -14836104408.207966
[2025-04-28 11:17:06] 2025-04-28 18:16:41,690 | INFO     | intersect: -14836104408.207966
[2025-04-28 11:17:06] 2025-04-28 18:16:41,691 | INFO     | chi2: 6.610956564282969
[2025-04-28 11:17:06] 2025-04-28 18:16:41,691 | INFO     | sum of square deviations: 4180211834.8739595
[2025-04-28 11:17:06] 2025-04-28 18:16:41,692 | INFO     | sum of deviations: 57579851032.3277
[2025-04-28 11:17:06] 2025-04-28 18:16:41,692 | INFO     | mean x: 1745856616.605042
[2025-04-28 11:17:06] 2025-04-28 18:16:41,692 | INFO     | mean y: 2085141.2268907563
[2025-04-28 11:17:06] 2025-04-28 18:16:41,692 | INFO     | -- intersect: -24046017653.29405
[2025-04-28 11:17:06] 2025-04-28 18:16:41,692 | INFO     | intersect: -24046017653.29405
[2025-04-28 11:17:06] 2025-04-28 18:16:41,693 | INFO     | chi2: 5.832713615180733
[2025-04-28 11:17:06] 2025-04-28 18:16:41,693 | INFO     | current chi2=5.832713615180733 (change=11.772017279720922 %)
[2025-04-28 11:17:06] 2025-04-28 18:16:41,693 | INFO     | right removable region: 237
[2025-04-28 11:17:06] 2025-04-28 18:16:41,693 | INFO     | sum of square deviations: 4180196584.8739595
[2025-04-28 11:17:06] 2025-04-28 18:16:41,694 | INFO     | sum of deviations: -11221943339.100843
[2025-04-28 11:17:06] 2025-04-28 18:16:41,694 | INFO     | mean x: 1745856921.605042
[2025-04-28 11:17:06] 2025-04-28 18:16:41,695 | INFO     | mean y: 2101839.0840336136
[2025-04-28 11:17:06] 2025-04-28 18:16:41,695 | INFO     | -- intersect: 4688940616.79179
[2025-04-28 11:17:06] 2025-04-28 18:16:41,695 | INFO     | intersect: 4688940616.79179
[2025-04-28 11:17:06] 2025-04-28 18:16:41,695 | INFO     | chi2: 4.049634122516746
[2025-04-28 11:17:06] 2025-04-28 18:16:41,695 | INFO     | current chi2=4.049634122516746 (change=38.74359809901468 %)
[2025-04-28 11:17:06] 2025-04-28 18:16:41,695 | INFO     | sum of square deviations: 3922221332.3175893
[2025-04-28 11:17:06] 2025-04-28 18:16:41,697 | INFO     | sum of deviations: -50351067617.248924
[2025-04-28 11:17:06] 2025-04-28 18:16:41,697 | INFO     | mean x: 1745857074.1072962
[2025-04-28 11:17:06] 2025-04-28 18:16:41,697 | INFO     | mean y: 2124976.9699570816
[2025-04-28 11:17:06] 2025-04-28 18:16:41,697 | INFO     | -- intersect: 22414365424.52432
[2025-04-28 11:17:06] 2025-04-28 18:16:41,697 | INFO     | intersect: 22414365424.52432
[2025-04-28 11:17:06] 2025-04-28 18:16:41,697 | INFO     | chi2: 2.520404307498631
[2025-04-28 11:17:06] 2025-04-28 18:16:41,697 | INFO     | current chi2=2.520404307498631 (change=37.762172303796596 %)
[2025-04-28 11:17:06] 2025-04-28 18:16:41,698 | INFO     | sum of square deviations: 3675083492.258778
[2025-04-28 11:17:06] 2025-04-28 18:16:41,699 | INFO     | sum of deviations: -80229654407.89037
[2025-04-28 11:17:06] 2025-04-28 18:16:41,699 | INFO     | mean x: 1745857226.6096492
[2025-04-28 11:17:06] 2025-04-28 18:16:41,699 | INFO     | mean y: 2143327.495614035
[2025-04-28 11:17:06] 2025-04-28 18:16:41,699 | INFO     | -- intersect: 38115433061.30806
[2025-04-28 11:17:06] 2025-04-28 18:16:41,699 | INFO     | intersect: 38115433061.30806
[2025-04-28 11:17:06] 2025-04-28 18:16:41,699 | INFO     | chi2: 1.4563440216820265
[2025-04-28 11:17:06] 2025-04-28 18:16:41,700 | INFO     | current chi2=1.4563440216820265 (change=42.21784110790656 %)
[2025-04-28 11:17:06] 2025-04-28 18:16:41,700 | INFO     | sum of square deviations: 3438550502.1972914
[2025-04-28 11:17:06] 2025-04-28 18:16:41,701 | INFO     | sum of deviations: -76036360390.72195
[2025-04-28 11:17:06] 2025-04-28 18:16:41,701 | INFO     | mean x: 1745857379.1121075
[2025-04-28 11:17:06] 2025-04-28 18:16:41,701 | INFO     | mean y: 2140615.7488789237
[2025-04-28 11:17:06] 2025-04-28 18:16:41,701 | INFO     | -- intersect: 38608129035.61966
[2025-04-28 11:17:06] 2025-04-28 18:16:41,701 | INFO     | intersect: 38608129035.61966
[2025-04-28 11:17:06] 2025-04-28 18:16:41,701 | INFO     | chi2: 1.4557605316969915
[2025-04-28 11:17:06] 2025-04-28 18:16:41,702 | INFO     | current chi2=1.4557605316969915 (change=0.04006539501299151 %)
[2025-04-28 11:17:06] 2025-04-28 18:16:41,702 | INFO     | left removable region: 40
[2025-04-28 11:17:06] 2025-04-28 18:16:41,702 | INFO     | sum of square deviations: 2370550057.8274045
[2025-04-28 11:17:06] 2025-04-28 18:16:41,703 | INFO     | sum of deviations: -33097768995.12181
[2025-04-28 11:17:06] 2025-04-28 18:16:41,703 | INFO     | mean x: 1745857806.1269035
[2025-04-28 11:17:06] 2025-04-28 18:16:41,703 | INFO     | mean y: 2138665.3248730963
[2025-04-28 11:17:06] 2025-04-28 18:16:41,703 | INFO     | -- intersect: 24377915154.29601
[2025-04-28 11:17:06] 2025-04-28 18:16:41,703 | INFO     | intersect: 24377915154.29601
[2025-04-28 11:17:06] 2025-04-28 18:16:41,703 | INFO     | chi2: 0.6096546300979842
[2025-04-28 11:17:06] 2025-04-28 18:16:41,704 | INFO     | -- intersect: 24377915154.29601
[2025-04-28 11:17:06] 2025-04-28 18:16:41,704 | INFO     | current memory leak: -13.96 B/s (using 197 data points, chi2=0.61)
[2025-04-28 11:17:06] 2025-04-28 18:16:41,704 | INFO     | ..............................
[2025-04-28 11:17:06] 2025-04-28 18:16:41,704 | INFO     | . Timing measurements:
[2025-04-28 11:17:06] 2025-04-28 18:16:41,704 | INFO     | . get job = 0 s
[2025-04-28 11:17:06] 2025-04-28 18:16:41,704 | INFO     | . initial setup = 3 s
[2025-04-28 11:17:06] 2025-04-28 18:16:41,704 | INFO     | . payload setup = 4 s
[2025-04-28 11:17:06] 2025-04-28 18:16:41,705 | INFO     | . stage-in = 0 s
[2025-04-28 11:17:06] 2025-04-28 18:16:41,705 | INFO     | . payload execution = 14795 s
[2025-04-28 11:17:06] 2025-04-28 18:16:41,705 | INFO     | . stage-out = 5 s
[2025-04-28 11:17:06] 2025-04-28 18:16:41,705 | INFO     | . log creation = 2 s
[2025-04-28 11:17:06] 2025-04-28 18:16:41,705 | INFO     | ..............................
[2025-04-28 11:17:06] 2025-04-28 18:16:41,792 | INFO     | 
[2025-04-28 11:17:06] 2025-04-28 18:16:41,792 | INFO     | job summary report
[2025-04-28 11:17:06] 2025-04-28 18:16:41,792 | INFO     | --------------------------------------------------
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | PanDA job id: 6618442889
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | task id: 44270688
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | errors: (none)
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | pilot state: finished 
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | transexitcode: 0
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | exeerrorcode: 0
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | exeerrordiag: 
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | exitcode: 0
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | exitmsg: OK
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | cpuconsumptiontime: 58433 s
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | nevents: 400
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | neventsw: 0
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | pid: 1725998
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | pgrp: 1725998
[2025-04-28 11:17:06] 2025-04-28 18:16:41,793 | INFO     | corecount: 8
[2025-04-28 11:17:06] 2025-04-28 18:16:41,794 | INFO     | event service: False
[2025-04-28 11:17:06] 2025-04-28 18:16:41,794 | INFO     | sizes: {0: 2393606, 3: 2393812, 11: 2393840, 14802: 2424555, 14803: 2424554, 14809: 2433545, 14812: 2433729, 14821: 2433899}
[2025-04-28 11:17:06] 2025-04-28 18:16:41,794 | INFO     | --------------------------------------------------
[2025-04-28 11:17:06] 2025-04-28 18:16:41,794 | INFO     | 
[2025-04-28 11:17:06] 2025-04-28 18:16:41,794 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-28 11:17:06] 2025-04-28 18:16:41,809 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,811 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 11:17:06] 2025-04-28 18:16:41,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,811 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 11:17:06] 2025-04-28 18:16:41,811 | INFO     | job 6618442889 has completed (purged errors)
[2025-04-28 11:17:06] 2025-04-28 18:16:41,811 | INFO     | overall cleanup function is called
[2025-04-28 11:17:06] 2025-04-28 18:16:43,603 | INFO     | --- collectZombieJob: --- 10, [1725998]
[2025-04-28 11:17:06] 2025-04-28 18:16:43,603 | INFO     | zombie collector waiting for pid 1725998
[2025-04-28 11:17:06] 2025-04-28 18:16:43,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 11:17:06] 2025-04-28 18:16:43,603 | INFO     | collected zombie processes
[2025-04-28 11:17:06] 2025-04-28 18:16:43,603 | INFO     | will attempt to kill all subprocesses of pid=1725998
[2025-04-28 11:17:06] 2025-04-28 18:16:43,832 | INFO     | process IDs to be killed: [1725998] (in reverse order)
[2025-04-28 11:17:06] 2025-04-28 18:16:43,901 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 11:17:06] 2025-04-28 18:16:43,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 11:17:06] 2025-04-28 18:16:43,909 | INFO     | did not find any defunct processes belonging to 1725998
[2025-04-28 11:17:06] 2025-04-28 18:16:43,918 | INFO     | did not find any defunct processes belonging to 1725998
[2025-04-28 11:17:06] 2025-04-28 18:16:43,919 | INFO     | ready for new job
[2025-04-28 11:17:06] 2025-04-28 18:16:43,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 11:17:06] 2025-04-28 18:16:43,921 | INFO     | **************************************
[2025-04-28 11:17:06] 2025-04-28 18:16:43,922 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 11:17:06] 2025-04-28 18:16:43,922 | INFO     | **************************************
[2025-04-28 11:17:06] 2025-04-28 18:16:43,922 | INFO     | 
[2025-04-28 11:17:06] 2025-04-28 18:16:43,923 | INFO     | architecture information:
[2025-04-28 11:17:06] 2025-04-28 18:16:43,924 | INFO     | executing command: cat /etc/os-release
[2025-04-28 11:17:06] 2025-04-28 18:16:43,935 | INFO     | cat /etc/os-release:
[2025-04-28 11:17:06] NAME="CentOS Linux"
[2025-04-28 11:17:06] VERSION="7 (Core)"
[2025-04-28 11:17:06] ID="centos"
[2025-04-28 11:17:06] ID_LIKE="rhel fedora"
[2025-04-28 11:17:06] VERSION_ID="7"
[2025-04-28 11:17:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 11:17:06] ANSI_COLOR="0;31"
[2025-04-28 11:17:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 11:17:06] HOME_URL="https://www.centos.org/"
[2025-04-28 11:17:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 11:17:06] 
[2025-04-28 11:17:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 11:17:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 11:17:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 11:17:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 11:17:06] 
[2025-04-28 11:17:06] 2025-04-28 18:16:43,935 | INFO     | **************************************
[2025-04-28 11:17:06] 2025-04-28 18:16:44,438 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-28 11:17:06] 2025-04-28 18:16:44,448 | INFO     | sufficient remaining disk space (1076285669376 B)
[2025-04-28 11:17:06] 2025-04-28 18:16:44,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 11:17:06] 2025-04-28 18:16:44,448 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 11:17:06] 2025-04-28 18:16:44,448 | INFO     | update_server=False
[2025-04-28 11:17:06] 2025-04-28 18:16:44,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 11:17:06] 2025-04-28 18:16:44,808 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 11:17:06] 2025-04-28 18:16:44,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 11:17:06] 2025-04-28 18:16:44,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 11:17:06] 2025-04-28 18:16:44,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 11:17:06] 2025-04-28 18:16:44,830 | INFO     | aborting loop
[2025-04-28 11:17:06] 2025-04-28 18:16:44,868 | INFO     | all data control threads have been joined
[2025-04-28 11:17:06] 2025-04-28 18:16:45,455 | INFO     | [job] retrieve thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:45,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 11:17:06] 2025-04-28 18:16:45,687 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:45,712 | INFO     | all job control threads have been joined
[2025-04-28 11:17:06] 2025-04-28 18:16:45,716 | INFO     | [data] copytool_in thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:45,760 | INFO     | [payload] validate_post thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:45,760 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:45,835 | INFO     | [job] job monitor thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:45,835 | INFO     | all payload control threads have been joined
[2025-04-28 11:17:06] 2025-04-28 18:16:45,874 | INFO     | [data] control thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:45,895 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:46,470 | INFO     | [job] validate thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:46,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:46,720 | INFO     | [job] control thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:46,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 11:17:06] 2025-04-28 18:16:46,844 | INFO     | [payload] control thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:47,022 | INFO     | [payload] failed_post thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:47,559 | INFO     | [data] copytool_out thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:47,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 11:17:06] 2025-04-28 18:16:47,806 | INFO     | [job] queue monitor thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:51,797 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 11:17:06] 2025-04-28 18:16:51,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699640686400)>', '<ExcThread(monitor, started 139698953504512)>']
[2025-04-28 11:17:06] 2025-04-28 18:16:52,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 11:17:06] 2025-04-28 18:16:52,851 | INFO     | [monitor] control thread has ended
[2025-04-28 11:17:06] 2025-04-28 18:16:56,976 | INFO     | all workflow threads have been joined
[2025-04-28 11:17:06] 2025-04-28 18:16:56,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 11:17:06] 2025-04-28 18:16:56,976 | INFO     | traces error code: 0
[2025-04-28 11:17:06] 2025-04-28 18:16:56,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 11:17:06] 2025-04-28 18:16:57,391 [wrapper] ==== pilot stdout END ====
[2025-04-28 11:17:06] 2025-04-28 18:16:57,393 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 11:17:06] 2025-04-28 18:16:57,395 [wrapper] pilotpid: 1719674
[2025-04-28 11:17:06] 2025-04-28 18:16:57,397 [wrapper] Pilot exit status: 0
[2025-04-28 11:17:06] 2025-04-28 18:17:01,396 [wrapper] pandaids: 6618442889
[2025-04-28 11:17:06] 2025-04-28 18:17:01,451 [wrapper] cleanup supervisor_pilot 2617335 1719675
[2025-04-28 11:17:06] 2025-04-28 18:17:01,453 [wrapper] Test setup, not cleaning
[2025-04-28 11:17:06] 2025-04-28 18:17:01,455 [wrapper] apfmon messages muted
[2025-04-28 11:17:06] 2025-04-28 18:17:01,458 [wrapper] ==== wrapper stdout END ====
[2025-04-28 11:17:06] 2025-04-28 18:17:01,460 [wrapper] ==== wrapper stderr END ====
[2025-04-28 11:17:06]  *** Error codes and diagnostics ***
[2025-04-28 11:17:06]     "exeErrorCode": 0,
[2025-04-28 11:17:06]     "exeErrorDiag": "",
[2025-04-28 11:17:06]     "pilotErrorCode": 0,
[2025-04-28 11:17:06]     "pilotErrorDiag": "",
[2025-04-28 11:17:06]  *** Listing of results directory ***
[2025-04-28 11:17:06] total 417104
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc    495897 Apr 27 22:53 pilot3.tar.gz
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc      5111 Apr 27 23:28 queuedata.json
[2025-04-28 11:17:06] -rwx------. 1 boinc boinc     37140 Apr 27 23:28 runpilot2-wrapper.sh
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc       100 Apr 28 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 11:17:06] -rwxr-xr-x. 1 boinc boinc      7986 Apr 28 07:09 run_atlas
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc       105 Apr 28 07:09 job.xml
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc      6453 Apr 28 07:09 init_data.xml
[2025-04-28 11:17:06] -rw-r--r--. 2 boinc boinc 215518230 Apr 28 07:09 EVNT.44270686._000015.pool.root.1
[2025-04-28 11:17:06] drwxrwx--x. 2 boinc boinc      4096 Apr 28 07:09 shared
[2025-04-28 11:17:06] -rw-r--r--. 2 boinc boinc    508847 Apr 28 07:09 input.tar.gz
[2025-04-28 11:17:06] -rw-r--r--. 2 boinc boinc     17569 Apr 28 07:09 start_atlas.sh
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc         0 Apr 28 07:09 boinc_lockfile
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc      2464 Apr 28 07:09 pandaJob.out
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc       424 Apr 28 07:09 setup.sh.local
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc    993826 Apr 28 07:09 agis_schedconf.cvmfs.json
[2025-04-28 11:17:06] drwx------. 4 boinc boinc      4096 Apr 28 07:09 pilot3
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc 204312438 Apr 28 11:15 HITS.44270688._000360.pool.root.1
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc       530 Apr 28 11:15 boinc_task_state.xml
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc        95 Apr 28 11:16 pilot_heartbeat.json
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc      1054 Apr 28 11:16 memory_monitor_summary.json
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc   1596659 Apr 28 11:16 agis_ddmendpoints.agis.ALL.json
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc    400622 Apr 28 11:16 log.44270688._000360.job.log.tgz.1
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc      7738 Apr 28 11:16 heartbeat.json
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc      4352 Apr 28 11:16 pilotlog.txt
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc   1322872 Apr 28 11:17 log.44270688._000360.job.log.1
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc       357 Apr 28 11:17 output.list
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc        28 Apr 28 11:17 wrapper_checkpoint.txt
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc       620 Apr 28 11:17 runtime_log
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc   1740800 Apr 28 11:17 result.tar.gz
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc     11143 Apr 28 11:17 runtime_log.err
[2025-04-28 11:17:06] -rw-------. 1 boinc boinc       667 Apr 28 11:17 kfeKDm09WT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmaCuLDmHLAFWo.diag
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc      8192 Apr 28 11:17 boinc_mmap_file
[2025-04-28 11:17:06] -rw-r--r--. 1 boinc boinc     20960 Apr 28 11:17 stderr.txt
[2025-04-28 11:17:07] HITS file was successfully produced:
[2025-04-28 11:17:07] -rw-------. 1 boinc boinc 204312438 Apr 28 11:15 shared/HITS.pool.root.1
[2025-04-28 11:17:07]  *** Contents of shared directory: ***
[2025-04-28 11:17:07] total 412220
[2025-04-28 11:17:07] -rw-r--r--. 2 boinc boinc 215518230 Apr 28 07:09 ATLAS.root_0
[2025-04-28 11:17:07] -rw-r--r--. 2 boinc boinc    508847 Apr 28 07:09 input.tar.gz
[2025-04-28 11:17:07] -rw-r--r--. 2 boinc boinc     17569 Apr 28 07:09 start_atlas.sh
[2025-04-28 11:17:07] -rw-------. 1 boinc boinc 204312438 Apr 28 11:15 HITS.pool.root.1
[2025-04-28 11:17:07] -rw-------. 1 boinc boinc   1740800 Apr 28 11:17 result.tar.gz
11:17:08 (1716093): run_atlas exited; CPU time 58713.290348
11:17:08 (1716093): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN