Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:19:44 (5765): wrapper (7.7.26015): starting
04:19:44 (5765): wrapper: running run_atlas (--nthreads 10)
[2025-04-28 04:19:44] Arguments: --nthreads 10
[2025-04-28 04:19:44] Threads: 10
[2025-04-28 04:19:44] Checking for CVMFS
[2025-04-28 04:19:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 04:19:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 04:19:46] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 04:19:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 04:19:47] 2.11.2.0 32705 55300 356408 145366 2 272 16540560 18432001 10876 130560 0 172091236 98.992 408685877 35864 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-28 04:19:47] CVMFS is ok
[2025-04-28 04:19:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 04:19:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-28 04:19:47] Further information can be found at the LHC@home message board.
[2025-04-28 04:19:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 04:19:47] Checking for apptainer binary...
[2025-04-28 04:19:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 04:19:47] Running /usr/bin/apptainer --version
[2025-04-28 04:19:47] apptainer version 1.3.2-1.el7
[2025-04-28 04:19:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 04:20:08] c-211-20.aglt2.org
[2025-04-28 04:20:08] apptainer works
[2025-04-28 04:20:08] Set ATHENA_PROC_NUMBER=10
[2025-04-28 04:20:08] Set ATHENA_CORE_NUMBER=10
[2025-04-28 04:20:08] Starting ATLAS job with PandaID=6618380619
[2025-04-28 04:20:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 17:02:03]  *** The last 200 lines of the pilot log: ***
[2025-04-28 17:02:03] 2025-04-28 21:01:39,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-28 17:02:03] 2025-04-28 21:01:39,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-28 17:02:03] 2025-04-28 21:01:39,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-28 17:02:03] 2025-04-28 21:01:39,381 | INFO     | fitting pss+swap vs Time
[2025-04-28 17:02:03] 2025-04-28 21:01:39,383 | INFO     | sum of square deviations: 127188140878.97455
[2025-04-28 17:02:03] 2025-04-28 21:01:39,649 | INFO     | sum of deviations: 658491158099.6636
[2025-04-28 17:02:03] 2025-04-28 21:01:39,686 | INFO     | mean x: 1745851374.7860026
[2025-04-28 17:02:03] 2025-04-28 21:01:39,686 | INFO     | mean y: 2518201.2368775234
[2025-04-28 17:02:03] 2025-04-28 21:01:39,686 | INFO     | -- intersect: -9036278071.024458
[2025-04-28 17:02:03] 2025-04-28 21:01:39,697 | INFO     | intersect: -9036278071.024458
[2025-04-28 17:02:03] 2025-04-28 21:01:39,855 | INFO     | chi2: 11.024947939906749
[2025-04-28 17:02:03] 2025-04-28 21:01:39,979 | INFO     | sum of square deviations: 124637843268.36436
[2025-04-28 17:02:03] 2025-04-28 21:01:40,459 | INFO     | sum of deviations: 860590639115.0435
[2025-04-28 17:02:03] 2025-04-28 21:01:40,491 | INFO     | mean x: 1745851222.291328
[2025-04-28 17:02:03] 2025-04-28 21:01:40,491 | INFO     | mean y: 2530269.5067750677
[2025-04-28 17:02:03] 2025-04-28 21:01:40,562 | INFO     | -- intersect: -12052100810.368704
[2025-04-28 17:02:03] 2025-04-28 21:01:40,562 | INFO     | intersect: -12052100810.368704
[2025-04-28 17:02:03] 2025-04-28 21:01:40,672 | INFO     | chi2: 7.860380786515619
[2025-04-28 17:02:03] 2025-04-28 21:01:40,673 | INFO     | current chi2=7.860380786515619 (change=28.70369248580684 %)
[2025-04-28 17:02:03] 2025-04-28 21:01:40,679 | INFO     | sum of square deviations: 122121736708.47899
[2025-04-28 17:02:03] 2025-04-28 21:01:41,212 | INFO     | sum of deviations: 854003375756.3612
[2025-04-28 17:02:03] 2025-04-28 21:01:41,212 | INFO     | mean x: 1745851069.792633
[2025-04-28 17:02:03] 2025-04-28 21:01:41,213 | INFO     | mean y: 2529870.2523874487
[2025-04-28 17:02:03] 2025-04-28 21:01:41,213 | INFO     | -- intersect: -12206293451.101875
[2025-04-28 17:02:03] 2025-04-28 21:01:41,213 | INFO     | intersect: -12206293451.101875
[2025-04-28 17:02:03] 2025-04-28 21:01:41,214 | INFO     | chi2: 7.8597492433751
[2025-04-28 17:02:03] 2025-04-28 21:01:41,214 | INFO     | current chi2=7.8597492433751 (change=0.008034510765712688 %)
[2025-04-28 17:02:03] 2025-04-28 21:01:41,214 | INFO     | right removable region: 732
[2025-04-28 17:02:03] 2025-04-28 21:01:41,350 | INFO     | sum of square deviations: 124637487028.36438
[2025-04-28 17:02:03] 2025-04-28 21:01:41,652 | INFO     | sum of deviations: 423129009109.224
[2025-04-28 17:02:03] 2025-04-28 21:01:41,652 | INFO     | mean x: 1745851527.291328
[2025-04-28 17:02:03] 2025-04-28 21:01:41,653 | INFO     | mean y: 2532266.3943089433
[2025-04-28 17:02:03] 2025-04-28 21:01:41,653 | INFO     | -- intersect: -5924419924.373872
[2025-04-28 17:02:03] 2025-04-28 21:01:41,653 | INFO     | intersect: -5924419924.373872
[2025-04-28 17:02:03] 2025-04-28 21:01:41,654 | INFO     | chi2: 7.443571968995272
[2025-04-28 17:02:03] 2025-04-28 21:01:41,654 | INFO     | current chi2=7.443571968995272 (change=32.48428918152124 %)
[2025-04-28 17:02:03] 2025-04-28 21:01:41,655 | INFO     | sum of square deviations: 122121159402.71207
[2025-04-28 17:02:03] 2025-04-28 21:01:41,724 | INFO     | monitor loop #2481: job 0:6618380619 is in state 'finished'
[2025-04-28 17:02:03] 2025-04-28 21:01:41,724 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 17:02:03] 2025-04-28 21:01:41,805 | INFO     | sum of deviations: 263776617365.45898
[2025-04-28 17:02:03] 2025-04-28 21:01:41,806 | INFO     | mean x: 1745851679.7967257
[2025-04-28 17:02:03] 2025-04-28 21:01:41,806 | INFO     | mean y: 2541922.1909959074
[2025-04-28 17:02:03] 2025-04-28 21:01:41,806 | INFO     | -- intersect: -3768424982.896851
[2025-04-28 17:02:03] 2025-04-28 21:01:41,806 | INFO     | intersect: -3768424982.896851
[2025-04-28 17:02:03] 2025-04-28 21:01:41,830 | INFO     | chi2: 5.8870358942862655
[2025-04-28 17:02:03] 2025-04-28 21:01:41,830 | INFO     | current chi2=5.8870358942862655 (change=20.91114428922633 %)
[2025-04-28 17:02:03] 2025-04-28 21:01:41,830 | INFO     | left removable region: 20
[2025-04-28 17:02:03] 2025-04-28 21:01:41,883 | INFO     | sum of square deviations: 111922916909.15602
[2025-04-28 17:02:03] 2025-04-28 21:01:41,903 | INFO     | sum of deviations: 199677798862.92432
[2025-04-28 17:02:03] 2025-04-28 21:01:41,903 | INFO     | mean x: 1745851649.3132021
[2025-04-28 17:02:03] 2025-04-28 21:01:41,903 | INFO     | mean y: 2570696.9016853934
[2025-04-28 17:02:03] 2025-04-28 21:01:41,903 | INFO     | -- intersect: -3112142751.453304
[2025-04-28 17:02:03] 2025-04-28 21:01:41,904 | INFO     | intersect: -3112142751.453304
[2025-04-28 17:02:03] 2025-04-28 21:01:41,905 | INFO     | chi2: 0.4851200374672345
[2025-04-28 17:02:03] 2025-04-28 21:01:41,905 | INFO     | -- intersect: -3112142751.453304
[2025-04-28 17:02:03] 2025-04-28 21:01:41,905 | INFO     | current memory leak: 1.78 B/s (using 712 data points, chi2=0.49)
[2025-04-28 17:02:03] 2025-04-28 21:01:41,906 | INFO     | ..............................
[2025-04-28 17:02:03] 2025-04-28 21:01:41,906 | INFO     | . Timing measurements:
[2025-04-28 17:02:03] 2025-04-28 21:01:41,907 | INFO     | . get job = 0 s
[2025-04-28 17:02:03] 2025-04-28 21:01:41,907 | INFO     | . initial setup = 6 s
[2025-04-28 17:02:03] 2025-04-28 21:01:41,907 | INFO     | . payload setup = 60 s
[2025-04-28 17:02:03] 2025-04-28 21:01:41,907 | INFO     | . stage-in = 0 s
[2025-04-28 17:02:03] 2025-04-28 21:01:41,907 | INFO     | . payload execution = 45328 s
[2025-04-28 17:02:03] 2025-04-28 21:01:41,907 | INFO     | . stage-out = 6 s
[2025-04-28 17:02:03] 2025-04-28 21:01:41,908 | INFO     | . log creation = 1 s
[2025-04-28 17:02:03] 2025-04-28 21:01:41,908 | INFO     | ..............................
[2025-04-28 17:02:03] 2025-04-28 21:01:42,962 | INFO     | 
[2025-04-28 17:02:03] 2025-04-28 21:01:42,963 | INFO     | job summary report
[2025-04-28 17:02:03] 2025-04-28 21:01:42,963 | INFO     | --------------------------------------------------
[2025-04-28 17:02:03] 2025-04-28 21:01:42,963 | INFO     | PanDA job id: 6618380619
[2025-04-28 17:02:03] 2025-04-28 21:01:42,963 | INFO     | task id: 44292257
[2025-04-28 17:02:03] 2025-04-28 21:01:42,963 | INFO     | errors: (none)
[2025-04-28 17:02:03] 2025-04-28 21:01:42,963 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 17:02:03] 2025-04-28 21:01:42,964 | INFO     | pilot state: finished 
[2025-04-28 17:02:03] 2025-04-28 21:01:42,964 | INFO     | transexitcode: 0
[2025-04-28 17:02:03] 2025-04-28 21:01:42,964 | INFO     | exeerrorcode: 0
[2025-04-28 17:02:03] 2025-04-28 21:01:42,964 | INFO     | exeerrordiag: 
[2025-04-28 17:02:03] 2025-04-28 21:01:42,964 | INFO     | exitcode: 0
[2025-04-28 17:02:03] 2025-04-28 21:01:42,964 | INFO     | exitmsg: OK
[2025-04-28 17:02:03] 2025-04-28 21:01:42,964 | INFO     | cpuconsumptiontime: 90219 s
[2025-04-28 17:02:03] 2025-04-28 21:01:42,965 | INFO     | nevents: 400
[2025-04-28 17:02:03] 2025-04-28 21:01:42,965 | INFO     | neventsw: 0
[2025-04-28 17:02:03] 2025-04-28 21:01:42,965 | INFO     | pid: 3294
[2025-04-28 17:02:03] 2025-04-28 21:01:42,965 | INFO     | pgrp: 3294
[2025-04-28 17:02:03] 2025-04-28 21:01:42,965 | INFO     | corecount: 10
[2025-04-28 17:02:03] 2025-04-28 21:01:42,965 | INFO     | event service: False
[2025-04-28 17:02:03] 2025-04-28 21:01:42,965 | INFO     | sizes: {0: 2392905, 1: 2393590, 2: 2393789, 13: 2393789, 24: 2393845, 35: 2393873, 46: 2394029, 47: 2394263, 57: 2394319, 45396: 2437881, 45397: 2437880, 45406: 24
[2025-04-28 17:02:03] 2025-04-28 21:01:42,966 | INFO     | --------------------------------------------------
[2025-04-28 17:02:03] 2025-04-28 21:01:42,966 | INFO     | 
[2025-04-28 17:02:03] 2025-04-28 21:01:42,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-28 17:02:03] 2025-04-28 21:01:43,349 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,350 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,350 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,350 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,350 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 17:02:03] 2025-04-28 21:01:43,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,356 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 17:02:03] 2025-04-28 21:01:43,395 | INFO     | job 6618380619 has completed (purged errors)
[2025-04-28 17:02:03] 2025-04-28 21:01:43,395 | INFO     | overall cleanup function is called
[2025-04-28 17:02:03] 2025-04-28 21:01:44,454 | INFO     | --- collectZombieJob: --- 10, [3294]
[2025-04-28 17:02:03] 2025-04-28 21:01:44,454 | INFO     | zombie collector waiting for pid 3294
[2025-04-28 17:02:03] 2025-04-28 21:01:44,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 17:02:03] 2025-04-28 21:01:44,454 | INFO     | collected zombie processes
[2025-04-28 17:02:03] 2025-04-28 21:01:44,454 | INFO     | will attempt to kill all subprocesses of pid=3294
[2025-04-28 17:02:03] 2025-04-28 21:01:44,480 | INFO     | PID=23186 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-28 17:02:03] 2025-04-28 21:01:44,480 | INFO     | .. there are 12 such processes running
[2025-04-28 17:02:03] 2025-04-28 21:01:46,618 | INFO     | process IDs to be killed: [3294] (in reverse order)
[2025-04-28 17:02:03] 2025-04-28 21:01:47,231 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 17:02:03] 2025-04-28 21:01:47,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 17:02:03] 2025-04-28 21:01:47,246 | INFO     | did not find any defunct processes belonging to 3294
[2025-04-28 17:02:03] 2025-04-28 21:01:47,260 | INFO     | did not find any defunct processes belonging to 3294
[2025-04-28 17:02:03] 2025-04-28 21:01:47,260 | INFO     | ready for new job
[2025-04-28 17:02:03] 2025-04-28 21:01:47,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 17:02:03] 2025-04-28 21:01:47,264 | INFO     | **************************************
[2025-04-28 17:02:03] 2025-04-28 21:01:47,264 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 17:02:03] 2025-04-28 21:01:47,264 | INFO     | **************************************
[2025-04-28 17:02:03] 2025-04-28 21:01:47,264 | INFO     | 
[2025-04-28 17:02:03] 2025-04-28 21:01:47,266 | INFO     | architecture information:
[2025-04-28 17:02:03] 2025-04-28 21:01:47,269 | INFO     | executing command: cat /etc/os-release
[2025-04-28 17:02:03] 2025-04-28 21:01:47,293 | INFO     | cat /etc/os-release:
[2025-04-28 17:02:03] NAME="CentOS Linux"
[2025-04-28 17:02:03] VERSION="7 (Core)"
[2025-04-28 17:02:03] ID="centos"
[2025-04-28 17:02:03] ID_LIKE="rhel fedora"
[2025-04-28 17:02:03] VERSION_ID="7"
[2025-04-28 17:02:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 17:02:03] ANSI_COLOR="0;31"
[2025-04-28 17:02:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 17:02:03] HOME_URL="https://www.centos.org/"
[2025-04-28 17:02:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 17:02:03] 
[2025-04-28 17:02:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 17:02:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 17:02:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 17:02:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 17:02:03] 
[2025-04-28 17:02:03] 2025-04-28 21:01:47,294 | INFO     | **************************************
[2025-04-28 17:02:03] 2025-04-28 21:01:47,798 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-28 17:02:03] 2025-04-28 21:01:47,968 | INFO     | sufficient remaining disk space (57130614784 B)
[2025-04-28 17:02:03] 2025-04-28 21:01:47,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 17:02:03] 2025-04-28 21:01:47,971 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 17:02:03] 2025-04-28 21:01:47,971 | INFO     | update_server=False
[2025-04-28 17:02:03] 2025-04-28 21:01:47,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 17:02:03] 2025-04-28 21:01:47,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 17:02:03] 2025-04-28 21:01:47,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 17:02:03] 2025-04-28 21:01:47,975 | INFO     | aborting loop
[2025-04-28 17:02:03] 2025-04-28 21:01:47,975 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 17:02:03] 2025-04-28 21:01:48,052 | INFO     | all payload control threads have been joined
[2025-04-28 17:02:03] 2025-04-28 21:01:48,375 | INFO     | all job control threads have been joined
[2025-04-28 17:02:03] 2025-04-28 21:01:48,486 | INFO     | all data control threads have been joined
[2025-04-28 17:02:03] 2025-04-28 21:01:48,509 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 17:02:03] 2025-04-28 21:01:48,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 17:02:03] 2025-04-28 21:01:48,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 17:02:03] 2025-04-28 21:01:48,980 | INFO     | [job] retrieve thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:48,992 | INFO     | [job] queue monitor thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,003 | INFO     | [job] job monitor thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,058 | INFO     | [payload] control thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,127 | INFO     | [job] validate thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,138 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,382 | INFO     | [job] control thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,389 | INFO     | [payload] validate_post thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,491 | INFO     | [data] control thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,518 | INFO     | [payload] failed_post thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,883 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,886 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,893 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:49,982 | INFO     | [data] copytool_out thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:50,266 | INFO     | [data] copytool_in thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:51,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 17:02:03] 2025-04-28 21:01:55,218 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 17:02:03] 2025-04-28 21:01:55,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585601906496)>', '<ExcThread(monitor, started 140584933119744)>']
[2025-04-28 17:02:03] 2025-04-28 21:01:55,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 17:02:03] 2025-04-28 21:01:55,551 | INFO     | [monitor] control thread has ended
[2025-04-28 17:02:03] 2025-04-28 21:02:00,470 | INFO     | all workflow threads have been joined
[2025-04-28 17:02:03] 2025-04-28 21:02:00,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 17:02:03] 2025-04-28 21:02:00,470 | INFO     | traces error code: 0
[2025-04-28 17:02:03] 2025-04-28 21:02:00,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 17:02:03] 2025-04-28 21:02:01,061 [wrapper] ==== pilot stdout END ====
[2025-04-28 17:02:03] 2025-04-28 21:02:01,098 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 17:02:03] 2025-04-28 21:02:01,134 [wrapper] pilotpid: 23186
[2025-04-28 17:02:03] 2025-04-28 21:02:01,155 [wrapper] Pilot exit status: 0
[2025-04-28 17:02:03] 2025-04-28 21:02:01,381 [wrapper] pandaids: 6618380619
[2025-04-28 17:02:03] 2025-04-28 21:02:01,905 [wrapper] cleanup supervisor_pilot 35545 23187
[2025-04-28 17:02:03] 2025-04-28 21:02:01,943 [wrapper] Test setup, not cleaning
[2025-04-28 17:02:03] 2025-04-28 21:02:01,977 [wrapper] apfmon messages muted
[2025-04-28 17:02:03] 2025-04-28 21:02:02,017 [wrapper] ==== wrapper stdout END ====
[2025-04-28 17:02:03] 2025-04-28 21:02:02,056 [wrapper] ==== wrapper stderr END ====
[2025-04-28 17:02:03]  *** Error codes and diagnostics ***
[2025-04-28 17:02:03]     "exeErrorCode": 0,
[2025-04-28 17:02:03]     "exeErrorDiag": "",
[2025-04-28 17:02:03]     "pilotErrorCode": 0,
[2025-04-28 17:02:03]     "pilotErrorDiag": "",
[2025-04-28 17:02:03]  *** Listing of results directory ***
[2025-04-28 17:02:03] total 422756
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas    495897 Apr 28 01:34 pilot3.tar.gz
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas      5111 Apr 28 01:41 queuedata.json
[2025-04-28 17:02:03] -rwx------ 1 boincer umatlas     37140 Apr 28 01:45 runpilot2-wrapper.sh
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas       100 Apr 28 04:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 17:02:03] -rwxr-xr-x 1 boincer umatlas      7986 Apr 28 04:19 run_atlas
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas       105 Apr 28 04:19 job.xml
[2025-04-28 17:02:03] -rw-r--r-- 2 boincer umatlas 223908686 Apr 28 04:19 EVNT.44292255._003143.pool.root.1
[2025-04-28 17:02:03] -rw-r--r-- 2 boincer umatlas     17569 Apr 28 04:19 start_atlas.sh
[2025-04-28 17:02:03] drwxrwx--x 2 boincer umatlas      4096 Apr 28 04:19 shared
[2025-04-28 17:02:03] -rw-r--r-- 2 boincer umatlas    508885 Apr 28 04:19 input.tar.gz
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas         0 Apr 28 04:19 boinc_lockfile
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas      2552 Apr 28 04:20 pandaJob.out
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas       467 Apr 28 04:20 setup.sh.local
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas    992174 Apr 28 04:21 agis_schedconf.cvmfs.json
[2025-04-28 17:02:03] drwx------ 4 boincer umatlas      4096 Apr 28 04:22 pilot3
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas 197033521 Apr 28 16:56 HITS.44292257._029074.pool.root.1
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas       531 Apr 28 16:56 boinc_task_state.xml
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas      1058 Apr 28 17:00 memory_monitor_summary.json
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas   1596659 Apr 28 17:00 agis_ddmendpoints.agis.ALL.json
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas    676515 Apr 28 17:00 log.44292257._029074.job.log.tgz.1
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas        95 Apr 28 17:01 pilot_heartbeat.json
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas      7751 Apr 28 17:01 heartbeat.json
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas      6035 Apr 28 17:01 init_data.xml
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas      8192 Apr 28 17:02 boinc_mmap_file
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas      4353 Apr 28 17:02 pilotlog.txt
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas        28 Apr 28 17:02 wrapper_checkpoint.txt
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas   3380698 Apr 28 17:02 log.44292257._029074.job.log.1
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas       357 Apr 28 17:02 output.list
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas       620 Apr 28 17:02 runtime_log
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas   4075520 Apr 28 17:02 result.tar.gz
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas     11421 Apr 28 17:02 runtime_log.err
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas       664 Apr 28 17:02 5ZkNDmpTWT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm4WCLDmJvFGKm.diag
[2025-04-28 17:02:03] -rw-r--r-- 1 boincer umatlas     21026 Apr 28 17:02 stderr.txt
[2025-04-28 17:02:03] HITS file was successfully produced:
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas 197033521 Apr 28 16:56 shared/HITS.pool.root.1
[2025-04-28 17:02:03]  *** Contents of shared directory: ***
[2025-04-28 17:02:03] total 415588
[2025-04-28 17:02:03] -rw-r--r-- 2 boincer umatlas 223908686 Apr 28 04:19 ATLAS.root_0
[2025-04-28 17:02:03] -rw-r--r-- 2 boincer umatlas     17569 Apr 28 04:19 start_atlas.sh
[2025-04-28 17:02:03] -rw-r--r-- 2 boincer umatlas    508885 Apr 28 04:19 input.tar.gz
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas 197033521 Apr 28 16:56 HITS.pool.root.1
[2025-04-28 17:02:03] -rw------- 1 boincer umatlas   4075520 Apr 28 17:02 result.tar.gz
17:02:04 (5765): run_atlas exited; CPU time 91942.366327
17:02:04 (5765): called boinc_finish(0)

</stderr_txt>
]]>

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