Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:38:11 (48454): wrapper (7.7.26015): starting
09:38:11 (48454): wrapper: running run_atlas (--nthreads 12)
[2025-04-28 09:38:11] Arguments: --nthreads 12
[2025-04-28 09:38:11] Threads: 12
[2025-04-28 09:38:11] Checking for CVMFS
[2025-04-28 09:38:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 09:38:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 09:38:31] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 09:38:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 09:38:31] 2.11.3.0 14008 21 50148 145365 3 187 3244467 4096000 0 130560 0 97170 99.983 71545 1148 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-28 09:38:31] CVMFS is ok
[2025-04-28 09:38:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 09:38:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-28 09:38:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-28 09:38:31] Further information can be found at the LHC@home message board.
[2025-04-28 09:38:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 09:38:31] Checking for apptainer binary...
[2025-04-28 09:38:31] apptainer is not installed, using version from CVMFS
[2025-04-28 09:38:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 09:38:32] hl-hn02
[2025-04-28 09:38:32] apptainer works
[2025-04-28 09:38:32] Set ATHENA_PROC_NUMBER=12
[2025-04-28 09:38:32] Set ATHENA_CORE_NUMBER=12
[2025-04-28 09:38:32] Starting ATLAS job with PandaID=6618290895
[2025-04-28 09:38:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 12:00:05]  *** The last 200 lines of the pilot log: ***
[2025-04-28 12:00:05] 2025-04-28 09:59:50,867 | INFO     | sum of square deviations: 814878534.5
[2025-04-28 12:00:05] 2025-04-28 09:59:50,869 | INFO     | sum of deviations: 61248511133.000015
[2025-04-28 12:00:05] 2025-04-28 09:59:50,870 | INFO     | mean x: 1745830190.5
[2025-04-28 12:00:05] 2025-04-28 09:59:50,870 | INFO     | mean y: 2578488.144927536
[2025-04-28 12:00:05] 2025-04-28 09:59:50,870 | INFO     | -- intersect: -131218818728.77586
[2025-04-28 12:00:05] 2025-04-28 09:59:50,870 | INFO     | intersect: -131218818728.77586
[2025-04-28 12:00:05] 2025-04-28 09:59:50,871 | INFO     | chi2: 5.716731429891181
[2025-04-28 12:00:05] 2025-04-28 09:59:50,871 | INFO     | sum of square deviations: 729472282.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,873 | INFO     | sum of deviations: 68415028178.999985
[2025-04-28 12:00:05] 2025-04-28 09:59:50,873 | INFO     | mean x: 1745830038.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,874 | INFO     | mean y: 2590750.1804511277
[2025-04-28 12:00:05] 2025-04-28 09:59:50,874 | INFO     | -- intersect: -163733597988.94785
[2025-04-28 12:00:05] 2025-04-28 09:59:50,874 | INFO     | intersect: -163733597988.94785
[2025-04-28 12:00:05] 2025-04-28 09:59:50,875 | INFO     | chi2: 4.950843764521362
[2025-04-28 12:00:05] 2025-04-28 09:59:50,875 | INFO     | current chi2=4.950843764521362 (change=13.397300096436362 %)
[2025-04-28 12:00:05] 2025-04-28 09:59:50,875 | INFO     | right removable region: 132
[2025-04-28 12:00:05] 2025-04-28 09:59:50,876 | INFO     | sum of square deviations: 729472282.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,877 | INFO     | sum of deviations: 23675591084.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,878 | INFO     | mean x: 1745830343.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,878 | INFO     | mean y: 2645317.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,878 | INFO     | -- intersect: -56659638258.16599
[2025-04-28 12:00:05] 2025-04-28 09:59:50,878 | INFO     | intersect: -56659638258.16599
[2025-04-28 12:00:05] 2025-04-28 09:59:50,879 | INFO     | chi2: 2.9148656893278875
[2025-04-28 12:00:05] 2025-04-28 09:59:50,879 | INFO     | current chi2=2.9148656893278875 (change=49.01167345230048 %)
[2025-04-28 12:00:05] 2025-04-28 09:59:50,880 | INFO     | sum of square deviations: 650252192.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,881 | INFO     | sum of deviations: -5282111512.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,882 | INFO     | mean x: 1745830495.5
[2025-04-28 12:00:05] 2025-04-28 09:59:50,882 | INFO     | mean y: 2701081.375
[2025-04-28 12:00:05] 2025-04-28 09:59:50,882 | INFO     | -- intersect: 14184385467.425043
[2025-04-28 12:00:05] 2025-04-28 09:59:50,882 | INFO     | intersect: 14184385467.425043
[2025-04-28 12:00:05] 2025-04-28 09:59:50,883 | INFO     | chi2: 1.3551061832887759
[2025-04-28 12:00:05] 2025-04-28 09:59:50,883 | INFO     | current chi2=1.3551061832887759 (change=53.51051033842875 %)
[2025-04-28 12:00:05] 2025-04-28 09:59:50,884 | INFO     | sum of square deviations: 576985702.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,885 | INFO     | sum of deviations: -18835394438.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,885 | INFO     | mean x: 1745830648.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,886 | INFO     | mean y: 2728964.349593496
[2025-04-28 12:00:05] 2025-04-28 09:59:50,886 | INFO     | -- intersect: 56994451225.483086
[2025-04-28 12:00:05] 2025-04-28 09:59:50,886 | INFO     | intersect: 56994451225.483086
[2025-04-28 12:00:05] 2025-04-28 09:59:50,887 | INFO     | chi2: 0.8672858925071523
[2025-04-28 12:00:05] 2025-04-28 09:59:50,887 | INFO     | current chi2=0.8672858925071523 (change=35.99867647254828 %)
[2025-04-28 12:00:05] 2025-04-28 09:59:50,887 | INFO     | sum of square deviations: 509440249.5
[2025-04-28 12:00:05] 2025-04-28 09:59:50,889 | INFO     | sum of deviations: -17218288952.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,889 | INFO     | mean x: 1745830800.5
[2025-04-28 12:00:05] 2025-04-28 09:59:50,889 | INFO     | mean y: 2725273.5084745763
[2025-04-28 12:00:05] 2025-04-28 09:59:50,889 | INFO     | -- intersect: 59009093957.20328
[2025-04-28 12:00:05] 2025-04-28 09:59:50,890 | INFO     | intersect: 59009093957.20328
[2025-04-28 12:00:05] 2025-04-28 09:59:50,890 | INFO     | chi2: 0.8670696780996036
[2025-04-28 12:00:05] 2025-04-28 09:59:50,890 | INFO     | current chi2=0.8670696780996036 (change=0.02493000398330892 %)
[2025-04-28 12:00:05] 2025-04-28 09:59:50,891 | INFO     | left removable region: 40
[2025-04-28 12:00:05] 2025-04-28 09:59:50,891 | INFO     | sum of square deviations: 241429643.0
[2025-04-28 12:00:05] 2025-04-28 09:59:50,892 | INFO     | sum of deviations: 1112383159.5
[2025-04-28 12:00:05] 2025-04-28 09:59:50,892 | INFO     | mean x: 1745831227.5
[2025-04-28 12:00:05] 2025-04-28 09:59:50,892 | INFO     | mean y: 2716041.7934782607
[2025-04-28 12:00:05] 2025-04-28 09:59:50,893 | INFO     | -- intersect: -8041172988.023019
[2025-04-28 12:00:05] 2025-04-28 09:59:50,893 | INFO     | intersect: -8041172988.023019
[2025-04-28 12:00:05] 2025-04-28 09:59:50,893 | INFO     | chi2: 0.0003047676239756692
[2025-04-28 12:00:05] 2025-04-28 09:59:50,894 | INFO     | -- intersect: -8041172988.023019
[2025-04-28 12:00:05] 2025-04-28 09:59:50,894 | INFO     | current memory leak: 4.61 B/s (using 92 data points, chi2=0.00)
[2025-04-28 12:00:05] 2025-04-28 09:59:50,895 | INFO     | ..............................
[2025-04-28 12:00:05] 2025-04-28 09:59:50,895 | INFO     | . Timing measurements:
[2025-04-28 12:00:05] 2025-04-28 09:59:50,895 | INFO     | . get job = 0 s
[2025-04-28 12:00:05] 2025-04-28 09:59:50,895 | INFO     | . initial setup = 2 s
[2025-04-28 12:00:05] 2025-04-28 09:59:50,895 | INFO     | . payload setup = 7 s
[2025-04-28 12:00:05] 2025-04-28 09:59:50,895 | INFO     | . stage-in = 0 s
[2025-04-28 12:00:05] 2025-04-28 09:59:50,896 | INFO     | . payload execution = 8366 s
[2025-04-28 12:00:05] 2025-04-28 09:59:50,896 | INFO     | . stage-out = 0 s
[2025-04-28 12:00:05] 2025-04-28 09:59:50,896 | INFO     | . log creation = 0 s
[2025-04-28 12:00:05] 2025-04-28 09:59:50,896 | INFO     | ..............................
[2025-04-28 12:00:05] 2025-04-28 09:59:51,457 | INFO     | 
[2025-04-28 12:00:05] 2025-04-28 09:59:51,458 | INFO     | job summary report
[2025-04-28 12:00:05] 2025-04-28 09:59:51,458 | INFO     | --------------------------------------------------
[2025-04-28 12:00:05] 2025-04-28 09:59:51,458 | INFO     | PanDA job id: 6618290895
[2025-04-28 12:00:05] 2025-04-28 09:59:51,458 | INFO     | task id: 44292257
[2025-04-28 12:00:05] 2025-04-28 09:59:51,458 | INFO     | errors: (none)
[2025-04-28 12:00:05] 2025-04-28 09:59:51,458 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 12:00:05] 2025-04-28 09:59:51,458 | INFO     | pilot state: finished 
[2025-04-28 12:00:05] 2025-04-28 09:59:51,458 | INFO     | transexitcode: 0
[2025-04-28 12:00:05] 2025-04-28 09:59:51,458 | INFO     | exeerrorcode: 0
[2025-04-28 12:00:05] 2025-04-28 09:59:51,458 | INFO     | exeerrordiag: 
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | exitcode: 0
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | exitmsg: OK
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | cpuconsumptiontime: 88195 s
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | nevents: 400
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | neventsw: 0
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | pid: 69112
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | pgrp: 69112
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | corecount: 12
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | event service: False
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | sizes: {0: 2393569, 1: 2393768, 6: 2393974, 12: 2394002, 8377: 2421461, 8378: 2421460, 8380: 2430599, 8382: 2430655, 8390: 2430825}
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | --------------------------------------------------
[2025-04-28 12:00:05] 2025-04-28 09:59:51,459 | INFO     | 
[2025-04-28 12:00:05] 2025-04-28 09:59:51,460 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-04-28 12:00:05] 2025-04-28 09:59:51,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,500 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,500 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,500 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,501 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,501 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,502 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,502 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,502 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,502 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,502 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,503 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 12:00:05] 2025-04-28 09:59:51,503 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,503 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 12:00:05] 2025-04-28 09:59:51,504 | INFO     | job 6618290895 has completed (purged errors)
[2025-04-28 12:00:05] 2025-04-28 09:59:51,504 | INFO     | overall cleanup function is called
[2025-04-28 12:00:05] 2025-04-28 09:59:52,515 | INFO     | --- collectZombieJob: --- 10, [69112]
[2025-04-28 12:00:05] 2025-04-28 09:59:52,516 | INFO     | zombie collector waiting for pid 69112
[2025-04-28 12:00:05] 2025-04-28 09:59:52,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 12:00:05] 2025-04-28 09:59:52,516 | INFO     | collected zombie processes
[2025-04-28 12:00:05] 2025-04-28 09:59:52,516 | INFO     | will attempt to kill all subprocesses of pid=69112
[2025-04-28 12:00:05] 2025-04-28 09:59:52,643 | INFO     | process IDs to be killed: [69112] (in reverse order)
[2025-04-28 12:00:05] 2025-04-28 09:59:52,735 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 12:00:05] 2025-04-28 09:59:52,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 12:00:05] 2025-04-28 09:59:52,743 | INFO     | did not find any defunct processes belonging to 69112
[2025-04-28 12:00:05] 2025-04-28 09:59:52,749 | INFO     | did not find any defunct processes belonging to 69112
[2025-04-28 12:00:05] 2025-04-28 09:59:52,750 | INFO     | ready for new job
[2025-04-28 12:00:05] 2025-04-28 09:59:52,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 12:00:05] 2025-04-28 09:59:52,753 | INFO     | **************************************
[2025-04-28 12:00:05] 2025-04-28 09:59:52,753 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 12:00:05] 2025-04-28 09:59:52,753 | INFO     | **************************************
[2025-04-28 12:00:05] 2025-04-28 09:59:52,754 | INFO     | 
[2025-04-28 12:00:05] 2025-04-28 09:59:52,756 | INFO     | architecture information:
[2025-04-28 12:00:05] 2025-04-28 09:59:52,756 | INFO     | executing command: cat /etc/os-release
[2025-04-28 12:00:05] 2025-04-28 09:59:52,784 | INFO     | cat /etc/os-release:
[2025-04-28 12:00:05] NAME="CentOS Linux"
[2025-04-28 12:00:05] VERSION="7 (Core)"
[2025-04-28 12:00:05] ID="centos"
[2025-04-28 12:00:05] ID_LIKE="rhel fedora"
[2025-04-28 12:00:05] VERSION_ID="7"
[2025-04-28 12:00:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 12:00:05] ANSI_COLOR="0;31"
[2025-04-28 12:00:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 12:00:05] HOME_URL="https://www.centos.org/"
[2025-04-28 12:00:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 12:00:05] 
[2025-04-28 12:00:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 12:00:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 12:00:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 12:00:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 12:00:05] 
[2025-04-28 12:00:05] 2025-04-28 09:59:52,784 | INFO     | **************************************
[2025-04-28 12:00:05] 2025-04-28 09:59:53,288 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-04-28 12:00:05] 2025-04-28 09:59:53,317 | INFO     | sufficient remaining disk space (216821399552 B)
[2025-04-28 12:00:05] 2025-04-28 09:59:53,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 12:00:05] 2025-04-28 09:59:53,318 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 12:00:05] 2025-04-28 09:59:53,318 | INFO     | update_server=False
[2025-04-28 12:00:05] 2025-04-28 09:59:53,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 12:00:05] 2025-04-28 09:59:53,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 12:00:05] 2025-04-28 09:59:53,319 | INFO     | aborting loop
[2025-04-28 12:00:05] 2025-04-28 09:59:53,457 | INFO     | all data control threads have been joined
[2025-04-28 12:00:05] 2025-04-28 09:59:53,533 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 12:00:05] 2025-04-28 09:59:53,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 12:00:05] 2025-04-28 09:59:53,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 12:00:05] 2025-04-28 09:59:53,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 12:00:05] 2025-04-28 09:59:53,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 12:00:05] 2025-04-28 09:59:53,701 | INFO     | all payload control threads have been joined
[2025-04-28 12:00:05] 2025-04-28 09:59:54,012 | INFO     | all job control threads have been joined
[2025-04-28 12:00:05] 2025-04-28 09:59:54,324 | INFO     | [job] retrieve thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:54,325 | INFO     | [job] job monitor thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:54,463 | INFO     | [data] control thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:54,637 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:54,707 | INFO     | [payload] control thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:54,944 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:55,018 | INFO     | [job] control thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:55,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:55,130 | INFO     | [payload] failed_post thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:55,341 | INFO     | [data] copytool_in thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:55,516 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:55,590 | INFO     | [data] copytool_out thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:55,657 | INFO     | [job] validate thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:55,753 | INFO     | [payload] validate_post thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:56,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 12:00:05] 2025-04-28 09:59:57,037 | INFO     | [job] queue monitor thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:57,679 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 12:00:05] 2025-04-28 09:59:59,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298563196736)>', '<ExcThread(monitor, started 140297522640640)>']
[2025-04-28 12:00:05] 2025-04-28 10:00:00,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 12:00:05] 2025-04-28 10:00:00,570 | INFO     | [monitor] control thread has ended
[2025-04-28 12:00:05] 2025-04-28 10:00:04,736 | INFO     | all workflow threads have been joined
[2025-04-28 12:00:05] 2025-04-28 10:00:04,737 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 12:00:05] 2025-04-28 10:00:04,738 | INFO     | traces error code: 0
[2025-04-28 12:00:05] 2025-04-28 10:00:04,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 12:00:05] 2025-04-28 10:00:04,896 [wrapper] ==== pilot stdout END ====
[2025-04-28 12:00:05] 2025-04-28 10:00:04,903 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 12:00:05] 2025-04-28 10:00:04,908 [wrapper] pilotpid: 55974
[2025-04-28 12:00:05] 2025-04-28 10:00:04,914 [wrapper] Pilot exit status: 0
[2025-04-28 12:00:05] 2025-04-28 10:00:04,934 [wrapper] pandaids: 6618290895
[2025-04-28 12:00:05] 2025-04-28 10:00:04,997 [wrapper] cleanup supervisor_pilot  102966 55975
[2025-04-28 12:00:05] 2025-04-28 10:00:05,003 [wrapper] Test setup, not cleaning
[2025-04-28 12:00:05] 2025-04-28 10:00:05,009 [wrapper] apfmon messages muted
[2025-04-28 12:00:05] 2025-04-28 10:00:05,015 [wrapper] ==== wrapper stdout END ====
[2025-04-28 12:00:05] 2025-04-28 10:00:05,021 [wrapper] ==== wrapper stderr END ====
[2025-04-28 12:00:05]  *** Error codes and diagnostics ***
[2025-04-28 12:00:05]     "exeErrorCode": 0,
[2025-04-28 12:00:05]     "exeErrorDiag": "",
[2025-04-28 12:00:05]     "pilotErrorCode": 0,
[2025-04-28 12:00:05]     "pilotErrorDiag": "",
[2025-04-28 12:00:05]  *** Listing of results directory ***
[2025-04-28 12:00:05] insgesamt 423008
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc    495897 28. Apr 05:54 pilot3.tar.gz
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc      5111 28. Apr 06:33 queuedata.json
[2025-04-28 12:00:05] -rwx------ 1 boinc boinc     37140 28. Apr 06:34 runpilot2-wrapper.sh
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc       100 28. Apr 09:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 12:00:05] -rwxr-xr-x 1 boinc boinc      7986 28. Apr 09:38 run_atlas
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc       105 28. Apr 09:38 job.xml
[2025-04-28 12:00:05] -rw-r--r-- 2 boinc boinc     17569 28. Apr 09:38 start_atlas.sh
[2025-04-28 12:00:05] drwxrwx--x 2 boinc boinc      4096 28. Apr 09:38 shared
[2025-04-28 12:00:05] -rw-r--r-- 2 boinc boinc    508885 28. Apr 09:38 input.tar.gz
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc      6422 28. Apr 09:38 init_data.xml
[2025-04-28 12:00:05] -rw-r--r-- 2 boinc boinc 226749459 28. Apr 09:38 EVNT.44292255._003115.pool.root.1
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc         0 28. Apr 09:38 boinc_lockfile
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc      2552 28. Apr 09:38 pandaJob.out
[2025-04-28 12:00:05] -rw------- 1 boinc boinc       424 28. Apr 09:38 setup.sh.local
[2025-04-28 12:00:05] -rw------- 1 boinc boinc    992850 28. Apr 09:39 agis_schedconf.cvmfs.json
[2025-04-28 12:00:05] -rw------- 1 boinc boinc   1596659 28. Apr 09:39 agis_ddmendpoints.agis.ALL.json
[2025-04-28 12:00:05] drwx------ 4 boinc boinc      4096 28. Apr 09:39 pilot3
[2025-04-28 12:00:05] -rw------- 1 boinc boinc 200234345 28. Apr 11:59 HITS.44292257._028340.pool.root.1
[2025-04-28 12:00:05] -rw------- 1 boinc boinc        95 28. Apr 11:59 pilot_heartbeat.json
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc       529 28. Apr 11:59 boinc_task_state.xml
[2025-04-28 12:00:05] -rw------- 1 boinc boinc      1013 28. Apr 11:59 memory_monitor_summary.json
[2025-04-28 12:00:05] -rw------- 1 boinc boinc    391728 28. Apr 11:59 log.44292257._028340.job.log.tgz.1
[2025-04-28 12:00:05] -rw------- 1 boinc boinc      7630 28. Apr 11:59 heartbeat.json
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc      8192 28. Apr 12:00 boinc_mmap_file
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc        27 28. Apr 12:00 wrapper_checkpoint.txt
[2025-04-28 12:00:05] -rw------- 1 boinc boinc      4361 28. Apr 12:00 pilotlog.txt
[2025-04-28 12:00:05] -rw------- 1 boinc boinc    777980 28. Apr 12:00 log.44292257._028340.job.log.1
[2025-04-28 12:00:05] -rw------- 1 boinc boinc       357 28. Apr 12:00 output.list
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc       620 28. Apr 12:00 runtime_log
[2025-04-28 12:00:05] -rw------- 1 boinc boinc   1187840 28. Apr 12:00 result.tar.gz
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc     11124 28. Apr 12:00 runtime_log.err
[2025-04-28 12:00:05] -rw------- 1 boinc boinc       648 28. Apr 12:00 RGCODmyNVT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOytLDmu2ZA3m.diag
[2025-04-28 12:00:05] -rw-r--r-- 1 boinc boinc     20758 28. Apr 12:00 stderr.txt
[2025-04-28 12:00:05] HITS file was successfully produced:
[2025-04-28 12:00:05] -rw------- 1 boinc boinc 200234345 28. Apr 11:59 shared/HITS.pool.root.1
[2025-04-28 12:00:05]  *** Contents of shared directory: ***
[2025-04-28 12:00:05] insgesamt 418664
[2025-04-28 12:00:05] -rw-r--r-- 2 boinc boinc     17569 28. Apr 09:38 start_atlas.sh
[2025-04-28 12:00:05] -rw-r--r-- 2 boinc boinc    508885 28. Apr 09:38 input.tar.gz
[2025-04-28 12:00:05] -rw-r--r-- 2 boinc boinc 226749459 28. Apr 09:38 ATLAS.root_0
[2025-04-28 12:00:05] -rw------- 1 boinc boinc 200234345 28. Apr 11:59 HITS.pool.root.1
[2025-04-28 12:00:05] -rw------- 1 boinc boinc   1187840 28. Apr 12:00 result.tar.gz
12:00:06 (48454): run_atlas exited; CPU time 88322.941833
12:00:06 (48454): called boinc_finish(0)

</stderr_txt>
]]>

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