Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:27:28 (29343): wrapper (7.7.26015): starting
02:27:28 (29343): wrapper: running run_atlas (--nthreads 8)
[2025-04-28 02:27:28] Arguments: --nthreads 8
[2025-04-28 02:27:28] Threads: 8
[2025-04-28 02:27:28] Checking for CVMFS
[2025-04-28 02:27:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 02:27:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 02:27:28] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 02:27:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 02:27:29] 2.11.2.0 2928 3928 76012 145364 3 58 12325096 20275201 1 130560 0 2328664 99.988 880815 30024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-28 02:27:29] CVMFS is ok
[2025-04-28 02:27:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 02:27:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-28 02:27:29] Further information can be found at the LHC@home message board.
[2025-04-28 02:27:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 02:27:29] Checking for apptainer binary...
[2025-04-28 02:27:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 02:27:29] Running /usr/bin/apptainer --version
[2025-04-28 02:27:29] apptainer version 1.3.2-1.el7
[2025-04-28 02:27:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 02:27:30] c-204-19.aglt2.org
[2025-04-28 02:27:30] apptainer works
[2025-04-28 02:27:30] Set ATHENA_PROC_NUMBER=8
[2025-04-28 02:27:30] Set ATHENA_CORE_NUMBER=8
[2025-04-28 02:27:30] Starting ATLAS job with PandaID=6617827129
[2025-04-28 02:27:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 04:50:07]  *** The last 200 lines of the pilot log: ***
[2025-04-28 04:50:07] 2025-04-28 08:49:47,545 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-28 04:50:07] 2025-04-28 08:49:47,640 | INFO     | 8525s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-28 04:50:07] 2025-04-28 08:49:48,767 | INFO     | PID=1520 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-28 04:50:07] 2025-04-28 08:49:49,841 | INFO     | monitor loop #629: job 0:6617827129 is in state 'finished'
[2025-04-28 04:50:07] 2025-04-28 08:49:49,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 04:50:07] 2025-04-28 08:49:52,344 | INFO     | monitor loop #630: job 0:6617827129 is in state 'finished'
[2025-04-28 04:50:07] 2025-04-28 08:49:52,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 04:50:07] 2025-04-28 08:49:53,061 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-28 04:50:07] 2025-04-28 08:49:53,061 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6617827129/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 04:50:07] 2025-04-28 08:49:53,062 | INFO     | extracted standard info from prmon json
[2025-04-28 04:50:07] 2025-04-28 08:49:53,062 | INFO     | extracted standard memory fields from prmon json
[2025-04-28 04:50:07] 2025-04-28 08:49:53,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-28 04:50:07] 2025-04-28 08:49:53,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-28 04:50:07] 2025-04-28 08:49:53,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-28 04:50:07] 2025-04-28 08:49:53,068 | INFO     | fitting pss+swap vs Time
[2025-04-28 04:50:07] 2025-04-28 08:49:53,068 | INFO     | sum of square deviations: 850825255.0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,069 | INFO     | sum of deviations: 5704858043.000004
[2025-04-28 04:50:07] 2025-04-28 08:49:53,069 | INFO     | mean x: 1745825936.5
[2025-04-28 04:50:07] 2025-04-28 08:49:53,070 | INFO     | mean y: 2504497.557142857
[2025-04-28 04:50:07] 2025-04-28 08:49:53,070 | INFO     | -- intersect: -11703411702.027271
[2025-04-28 04:50:07] 2025-04-28 08:49:53,070 | INFO     | intersect: -11703411702.027271
[2025-04-28 04:50:07] 2025-04-28 08:49:53,070 | INFO     | chi2: 3.1930336432234796
[2025-04-28 04:50:07] 2025-04-28 08:49:53,070 | INFO     | sum of square deviations: 762879420.0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,071 | INFO     | sum of deviations: 14919315828.0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,071 | INFO     | mean x: 1745825784.0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,071 | INFO     | mean y: 2520007.8962962963
[2025-04-28 04:50:07] 2025-04-28 08:49:53,071 | INFO     | -- intersect: -34139869430.478783
[2025-04-28 04:50:07] 2025-04-28 08:49:53,072 | INFO     | intersect: -34139869430.478783
[2025-04-28 04:50:07] 2025-04-28 08:49:53,072 | INFO     | chi2: 2.4410947696125462
[2025-04-28 04:50:07] 2025-04-28 08:49:53,072 | INFO     | current chi2=2.4410947696125462 (change=23.549356431203293 %)
[2025-04-28 04:50:07] 2025-04-28 08:49:53,072 | INFO     | right removable region: 134
[2025-04-28 04:50:07] 2025-04-28 08:49:53,073 | INFO     | sum of square deviations: 762879420.0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,073 | INFO     | sum of deviations: -25456362802.999996
[2025-04-28 04:50:07] 2025-04-28 08:49:53,073 | INFO     | mean x: 1745826089.0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,073 | INFO     | mean y: 2558175.5555555555
[2025-04-28 04:50:07] 2025-04-28 08:49:53,074 | INFO     | -- intersect: 58258661495.9552
[2025-04-28 04:50:07] 2025-04-28 08:49:53,074 | INFO     | intersect: 58258661495.9552
[2025-04-28 04:50:07] 2025-04-28 08:49:53,074 | INFO     | chi2: 1.061241907627159
[2025-04-28 04:50:07] 2025-04-28 08:49:53,074 | INFO     | current chi2=1.061241907627159 (change=66.76383570591514 %)
[2025-04-28 04:50:07] 2025-04-28 08:49:53,074 | INFO     | sum of square deviations: 681212772.5
[2025-04-28 04:50:07] 2025-04-28 08:49:53,075 | INFO     | sum of deviations: -30284707393.0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,075 | INFO     | mean x: 1745826241.5
[2025-04-28 04:50:07] 2025-04-28 08:49:53,075 | INFO     | mean y: 2567102.5384615385
[2025-04-28 04:50:07] 2025-04-28 08:49:53,075 | INFO     | -- intersect: 77616844193.69276
[2025-04-28 04:50:07] 2025-04-28 08:49:53,075 | INFO     | intersect: 77616844193.69276
[2025-04-28 04:50:07] 2025-04-28 08:49:53,076 | INFO     | chi2: 0.9571525681812528
[2025-04-28 04:50:07] 2025-04-28 08:49:53,076 | INFO     | current chi2=0.9571525681812528 (change=9.808257542207375 %)
[2025-04-28 04:50:07] 2025-04-28 08:49:53,076 | INFO     | left removable region: 20
[2025-04-28 04:50:07] 2025-04-28 08:49:53,076 | INFO     | sum of square deviations: 459366752.5
[2025-04-28 04:50:07] 2025-04-28 08:49:53,077 | INFO     | sum of deviations: -18186985361.000004
[2025-04-28 04:50:07] 2025-04-28 08:49:53,077 | INFO     | mean x: 1745826363.5
[2025-04-28 04:50:07] 2025-04-28 08:49:53,077 | INFO     | mean y: 2581453.49122807
[2025-04-28 04:50:07] 2025-04-28 08:49:53,077 | INFO     | -- intersect: 69122338908.77718
[2025-04-28 04:50:07] 2025-04-28 08:49:53,077 | INFO     | intersect: 69122338908.77718
[2025-04-28 04:50:07] 2025-04-28 08:49:53,078 | INFO     | chi2: 0.12070454955745435
[2025-04-28 04:50:07] 2025-04-28 08:49:53,078 | INFO     | -- intersect: 69122338908.77718
[2025-04-28 04:50:07] 2025-04-28 08:49:53,078 | INFO     | current memory leak: -39.59 B/s (using 114 data points, chi2=0.12)
[2025-04-28 04:50:07] 2025-04-28 08:49:53,078 | INFO     | ..............................
[2025-04-28 04:50:07] 2025-04-28 08:49:53,078 | INFO     | . Timing measurements:
[2025-04-28 04:50:07] 2025-04-28 08:49:53,079 | INFO     | . get job = 0 s
[2025-04-28 04:50:07] 2025-04-28 08:49:53,079 | INFO     | . initial setup = 2 s
[2025-04-28 04:50:07] 2025-04-28 08:49:53,079 | INFO     | . payload setup = 9 s
[2025-04-28 04:50:07] 2025-04-28 08:49:53,079 | INFO     | . stage-in = 0 s
[2025-04-28 04:50:07] 2025-04-28 08:49:53,079 | INFO     | . payload execution = 8489 s
[2025-04-28 04:50:07] 2025-04-28 08:49:53,079 | INFO     | . stage-out = 0 s
[2025-04-28 04:50:07] 2025-04-28 08:49:53,079 | INFO     | . log creation = 0 s
[2025-04-28 04:50:07] 2025-04-28 08:49:53,079 | INFO     | ..............................
[2025-04-28 04:50:07] 2025-04-28 08:49:53,200 | INFO     | 
[2025-04-28 04:50:07] 2025-04-28 08:49:53,201 | INFO     | job summary report
[2025-04-28 04:50:07] 2025-04-28 08:49:53,201 | INFO     | --------------------------------------------------
[2025-04-28 04:50:07] 2025-04-28 08:49:53,201 | INFO     | PanDA job id: 6617827129
[2025-04-28 04:50:07] 2025-04-28 08:49:53,201 | INFO     | task id: 44292257
[2025-04-28 04:50:07] 2025-04-28 08:49:53,201 | INFO     | errors: (none)
[2025-04-28 04:50:07] 2025-04-28 08:49:53,202 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 04:50:07] 2025-04-28 08:49:53,202 | INFO     | pilot state: finished 
[2025-04-28 04:50:07] 2025-04-28 08:49:53,202 | INFO     | transexitcode: 0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,202 | INFO     | exeerrorcode: 0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,202 | INFO     | exeerrordiag: 
[2025-04-28 04:50:07] 2025-04-28 08:49:53,202 | INFO     | exitcode: 0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,203 | INFO     | exitmsg: OK
[2025-04-28 04:50:07] 2025-04-28 08:49:53,203 | INFO     | cpuconsumptiontime: 60901 s
[2025-04-28 04:50:07] 2025-04-28 08:49:53,203 | INFO     | nevents: 400
[2025-04-28 04:50:07] 2025-04-28 08:49:53,203 | INFO     | neventsw: 0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,203 | INFO     | pid: 8148
[2025-04-28 04:50:07] 2025-04-28 08:49:53,203 | INFO     | pgrp: 8148
[2025-04-28 04:50:07] 2025-04-28 08:49:53,204 | INFO     | corecount: 8
[2025-04-28 04:50:07] 2025-04-28 08:49:53,204 | INFO     | event service: False
[2025-04-28 04:50:07] 2025-04-28 08:49:53,204 | INFO     | sizes: {0: 2393733, 6: 2393939, 11: 2393967, 8502: 2421642, 8503: 2430583, 8504: 2430639, 8511: 2430937}
[2025-04-28 04:50:07] 2025-04-28 08:49:53,204 | INFO     | --------------------------------------------------
[2025-04-28 04:50:07] 2025-04-28 08:49:53,204 | INFO     | 
[2025-04-28 04:50:07] 2025-04-28 08:49:53,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-28 04:50:07] 2025-04-28 08:49:53,233 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,233 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,233 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,234 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 04:50:07] 2025-04-28 08:49:53,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 04:50:07] 2025-04-28 08:49:53,237 | INFO     | job 6617827129 has completed (purged errors)
[2025-04-28 04:50:07] 2025-04-28 08:49:53,237 | INFO     | overall cleanup function is called
[2025-04-28 04:50:07] 2025-04-28 08:49:54,245 | INFO     | --- collectZombieJob: --- 10, [8148]
[2025-04-28 04:50:07] 2025-04-28 08:49:54,246 | INFO     | zombie collector waiting for pid 8148
[2025-04-28 04:50:07] 2025-04-28 08:49:54,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 04:50:07] 2025-04-28 08:49:54,246 | INFO     | collected zombie processes
[2025-04-28 04:50:07] 2025-04-28 08:49:54,246 | INFO     | will attempt to kill all subprocesses of pid=8148
[2025-04-28 04:50:07] 2025-04-28 08:49:54,336 | INFO     | process IDs to be killed: [8148] (in reverse order)
[2025-04-28 04:50:07] 2025-04-28 08:49:54,411 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 04:50:07] 2025-04-28 08:49:54,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 04:50:07] 2025-04-28 08:49:54,415 | INFO     | did not find any defunct processes belonging to 8148
[2025-04-28 04:50:07] 2025-04-28 08:49:54,419 | INFO     | did not find any defunct processes belonging to 8148
[2025-04-28 04:50:07] 2025-04-28 08:49:54,420 | INFO     | ready for new job
[2025-04-28 04:50:07] 2025-04-28 08:49:54,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 04:50:07] 2025-04-28 08:49:54,421 | INFO     | **************************************
[2025-04-28 04:50:07] 2025-04-28 08:49:54,422 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 04:50:07] 2025-04-28 08:49:54,422 | INFO     | **************************************
[2025-04-28 04:50:07] 2025-04-28 08:49:54,422 | INFO     | 
[2025-04-28 04:50:07] 2025-04-28 08:49:54,422 | INFO     | architecture information:
[2025-04-28 04:50:07] 2025-04-28 08:49:54,423 | INFO     | executing command: cat /etc/os-release
[2025-04-28 04:50:07] 2025-04-28 08:49:54,441 | INFO     | cat /etc/os-release:
[2025-04-28 04:50:07] NAME="CentOS Linux"
[2025-04-28 04:50:07] VERSION="7 (Core)"
[2025-04-28 04:50:07] ID="centos"
[2025-04-28 04:50:07] ID_LIKE="rhel fedora"
[2025-04-28 04:50:07] VERSION_ID="7"
[2025-04-28 04:50:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 04:50:07] ANSI_COLOR="0;31"
[2025-04-28 04:50:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 04:50:07] HOME_URL="https://www.centos.org/"
[2025-04-28 04:50:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 04:50:07] 
[2025-04-28 04:50:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 04:50:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 04:50:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 04:50:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 04:50:07] 
[2025-04-28 04:50:07] 2025-04-28 08:49:54,441 | INFO     | **************************************
[2025-04-28 04:50:07] 2025-04-28 08:49:54,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-28 04:50:07] 2025-04-28 08:49:54,964 | INFO     | sufficient remaining disk space (18581815296 B)
[2025-04-28 04:50:07] 2025-04-28 08:49:54,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 04:50:07] 2025-04-28 08:49:54,964 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 04:50:07] 2025-04-28 08:49:54,965 | INFO     | update_server=False
[2025-04-28 04:50:07] 2025-04-28 08:49:54,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 04:50:07] 2025-04-28 08:49:54,965 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-28 04:50:07] 2025-04-28 08:49:54,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 04:50:07] 2025-04-28 08:49:54,966 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 04:50:07] 2025-04-28 08:49:54,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 04:50:07] 2025-04-28 08:49:54,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 04:50:07] 2025-04-28 08:49:55,122 | INFO     | all job control threads have been joined
[2025-04-28 04:50:07] 2025-04-28 08:49:55,439 | INFO     | all payload control threads have been joined
[2025-04-28 04:50:07] 2025-04-28 08:49:55,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 04:50:07] 2025-04-28 08:49:55,853 | INFO     | aborting loop
[2025-04-28 04:50:07] 2025-04-28 08:49:55,927 | INFO     | all data control threads have been joined
[2025-04-28 04:50:07] 2025-04-28 08:49:55,967 | INFO     | [job] retrieve thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:55,972 | INFO     | [job] queue monitor thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,067 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,094 | INFO     | [job] validate thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 04:50:07] 2025-04-28 08:49:56,128 | INFO     | [job] control thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,166 | INFO     | [payload] failed_post thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,448 | INFO     | [payload] control thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,577 | INFO     | [data] copytool_in thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,704 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,782 | INFO     | [payload] validate_post thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,858 | INFO     | [job] job monitor thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:56,933 | INFO     | [data] control thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:57,426 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:49:57,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 04:50:07] 2025-04-28 08:49:58,102 | INFO     | [data] copytool_out thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:50:01,522 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 04:50:07] 2025-04-28 08:50:02,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168456701760)>', '<ExcThread(monitor, started 140168153503488)>']
[2025-04-28 04:50:07] 2025-04-28 08:50:02,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 04:50:07] 2025-04-28 08:50:03,000 | INFO     | [monitor] control thread has ended
[2025-04-28 04:50:07] 2025-04-28 08:50:07,237 | INFO     | all workflow threads have been joined
[2025-04-28 04:50:07] 2025-04-28 08:50:07,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 04:50:07] 2025-04-28 08:50:07,237 | INFO     | traces error code: 0
[2025-04-28 04:50:07] 2025-04-28 08:50:07,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 04:50:07] 2025-04-28 08:50:07,364 [wrapper] ==== pilot stdout END ====
[2025-04-28 04:50:07] 2025-04-28 08:50:07,368 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 04:50:07] 2025-04-28 08:50:07,373 [wrapper] pilotpid: 1520
[2025-04-28 04:50:07] 2025-04-28 08:50:07,377 [wrapper] Pilot exit status: 0
[2025-04-28 04:50:07] 2025-04-28 08:50:07,394 [wrapper] pandaids: 6617827129
[2025-04-28 04:50:07] 2025-04-28 08:50:07,437 [wrapper] cleanup supervisor_pilot  7900 1521
[2025-04-28 04:50:07] 2025-04-28 08:50:07,441 [wrapper] Test setup, not cleaning
[2025-04-28 04:50:07] 2025-04-28 08:50:07,446 [wrapper] apfmon messages muted
[2025-04-28 04:50:07] 2025-04-28 08:50:07,451 [wrapper] ==== wrapper stdout END ====
[2025-04-28 04:50:07] 2025-04-28 08:50:07,456 [wrapper] ==== wrapper stderr END ====
[2025-04-28 04:50:07]  *** Error codes and diagnostics ***
[2025-04-28 04:50:07]     "exeErrorCode": 0,
[2025-04-28 04:50:07]     "exeErrorDiag": "",
[2025-04-28 04:50:07]     "pilotErrorCode": 0,
[2025-04-28 04:50:07]     "pilotErrorDiag": "",
[2025-04-28 04:50:07]  *** Listing of results directory ***
[2025-04-28 04:50:07] total 419652
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas    495897 Apr 27 19:00 pilot3.tar.gz
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas      5111 Apr 27 19:30 queuedata.json
[2025-04-28 04:50:07] -rwx------ 1 boincer umatlas     37140 Apr 27 19:32 runpilot2-wrapper.sh
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas       100 Apr 28 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 04:50:07] -rwxr-xr-x 1 boincer umatlas      7986 Apr 28 02:27 run_atlas
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas       105 Apr 28 02:27 job.xml
[2025-04-28 04:50:07] -rw-r--r-- 2 boincer umatlas 222727443 Apr 28 02:27 EVNT.44292255._003008.pool.root.1
[2025-04-28 04:50:07] -rw-r--r-- 2 boincer umatlas     17569 Apr 28 02:27 start_atlas.sh
[2025-04-28 04:50:07] drwxrwx--x 2 boincer umatlas      4096 Apr 28 02:27 shared
[2025-04-28 04:50:07] -rw-r--r-- 2 boincer umatlas    508885 Apr 28 02:27 input.tar.gz
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas         0 Apr 28 02:27 boinc_lockfile
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas      2552 Apr 28 02:27 pandaJob.out
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas       462 Apr 28 02:27 setup.sh.local
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas    992879 Apr 28 02:27 agis_schedconf.cvmfs.json
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas   1596659 Apr 28 02:27 agis_ddmendpoints.agis.ALL.json
[2025-04-28 04:50:07] drwx------ 4 boincer umatlas      4096 Apr 28 02:27 pilot3
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas      5904 Apr 28 04:45 init_data.xml
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas 200904743 Apr 28 04:49 HITS.44292257._025496.pool.root.1
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas       529 Apr 28 04:49 boinc_task_state.xml
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas      1064 Apr 28 04:49 memory_monitor_summary.json
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas        95 Apr 28 04:49 pilot_heartbeat.json
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas    350218 Apr 28 04:49 log.44292257._025496.job.log.tgz.1
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas      7750 Apr 28 04:49 heartbeat.json
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas      8192 Apr 28 04:49 boinc_mmap_file
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas        27 Apr 28 04:50 wrapper_checkpoint.txt
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas      4476 Apr 28 04:50 pilotlog.txt
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas    772241 Apr 28 04:50 log.44292257._025496.job.log.1
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas       357 Apr 28 04:50 output.list
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas       620 Apr 28 04:50 runtime_log
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas   1146880 Apr 28 04:50 result.tar.gz
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas     11388 Apr 28 04:50 runtime_log.err
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas       660 Apr 28 04:50 hZyKDmueQT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWQtLDmQzGCHm.diag
[2025-04-28 04:50:07] -rw-r--r-- 1 boincer umatlas     21247 Apr 28 04:50 stderr.txt
[2025-04-28 04:50:07] HITS file was successfully produced:
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas 200904743 Apr 28 04:49 shared/HITS.pool.root.1
[2025-04-28 04:50:07]  *** Contents of shared directory: ***
[2025-04-28 04:50:07] total 415352
[2025-04-28 04:50:07] -rw-r--r-- 2 boincer umatlas 222727443 Apr 28 02:27 ATLAS.root_0
[2025-04-28 04:50:07] -rw-r--r-- 2 boincer umatlas     17569 Apr 28 02:27 start_atlas.sh
[2025-04-28 04:50:07] -rw-r--r-- 2 boincer umatlas    508885 Apr 28 02:27 input.tar.gz
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas 200904743 Apr 28 04:49 HITS.pool.root.1
[2025-04-28 04:50:07] -rw------- 1 boincer umatlas   1146880 Apr 28 04:50 result.tar.gz
04:50:09 (29343): run_atlas exited; CPU time 60871.316278
04:50:09 (29343): called boinc_finish(0)

</stderr_txt>
]]>

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