Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:54:07 (675143): wrapper (7.7.26015): starting
06:54:07 (675143): wrapper: running run_atlas (--nthreads 12)
[2025-04-28 06:54:07] Arguments: --nthreads 12
[2025-04-28 06:54:07] Threads: 12
[2025-04-28 06:54:07] Checking for CVMFS
[2025-04-28 06:54:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 06:54:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 06:54:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 06:54:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 06:54:08] 2.11.5.0 2091750 33334 364872 145374 0 514 31245194 45568001 11149 130560 0 244540566 99.801 176322024 31303 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-28 06:54:08] CVMFS is ok
[2025-04-28 06:54:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 06:54:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-28 06:54:08] Further information can be found at the LHC@home message board.
[2025-04-28 06:54:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 06:54:08] Checking for apptainer binary...
[2025-04-28 06:54:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 06:54:08] Running /usr/bin/apptainer --version
[2025-04-28 06:54:08] apptainer version 1.3.5-1.el9
[2025-04-28 06:54:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 06:54:08] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0052.triumf.lcg
[2025-04-28 06:54:08] apptainer works
[2025-04-28 06:54:08] Set ATHENA_PROC_NUMBER=12
[2025-04-28 06:54:08] Set ATHENA_CORE_NUMBER=12
[2025-04-28 06:54:08] Starting ATLAS job with PandaID=6618080697
[2025-04-28 06:54:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 08:13:56]  *** The last 200 lines of the pilot log: ***
[2025-04-28 08:13:56]  status=None
[2025-04-28 08:13:56]  status_code=0
[2025-04-28 08:13:56]  storage_token=
[2025-04-28 08:13:56]  surl=/home/boinc/slots/0/PanDA_Pilot-6618080697/log.44292257._027779.job.log.tgz.1
[2025-04-28 08:13:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/40/log.44292257._027779.job.log.tgz.1
[2025-04-28 08:13:56]  workdir=None
[2025-04-28 08:13:56] ]
[2025-04-28 08:13:56] 2025-04-28 15:13:20,585 | INFO     | transferring file log.44292257._027779.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6618080697/log.44292257._027779.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-04-28 08:13:56] 2025-04-28 15:13:20,585 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6618080697/log.44292257._027779.job.log.tgz.1 /home/boinc/slots/0/log.44292257._027779.job.log.t
[2025-04-28 08:13:56] 2025-04-28 15:13:20,602 | INFO     | adding to output.list: log.44292257._027779.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/40/log.44292257._027779.job.log.tg
[2025-04-28 08:13:56] 2025-04-28 15:13:20,603 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-28 08:13:56] 2025-04-28 15:13:20,603 | INFO     | summary of transferred files:
[2025-04-28 08:13:56] 2025-04-28 15:13:20,603 | INFO     |  -- lfn=log.44292257._027779.job.log.tgz.1, status_code=0, status=transferred
[2025-04-28 08:13:56] 2025-04-28 15:13:20,603 | INFO     | stage-out finished correctly
[2025-04-28 08:13:56] 2025-04-28 15:13:20,804 | INFO     | monitor loop #342: job 0:6618080697 is in state 'finished'
[2025-04-28 08:13:56] 2025-04-28 15:13:20,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 08:13:56] 2025-04-28 15:13:23,311 | INFO     | monitor loop #343: job 0:6618080697 is in state 'finished'
[2025-04-28 08:13:56] 2025-04-28 15:13:23,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 08:13:56] 2025-04-28 15:13:24,042 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-28 08:13:56] 2025-04-28 15:13:25,612 | INFO     | job 6618080697 has state=finished
[2025-04-28 08:13:56] 2025-04-28 15:13:25,612 | INFO     | preparing for final server update for job 6618080697 in state='finished'
[2025-04-28 08:13:56] 2025-04-28 15:13:25,613 | INFO     | this job has now completed (state=finished)
[2025-04-28 08:13:56] 2025-04-28 15:13:25,613 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-28 08:13:56] 2025-04-28 15:13:25,613 | INFO     | log transfer has been attempted: DONE
[2025-04-28 08:13:56] 2025-04-28 15:13:25,613 | INFO     | job 6618080697 has finished - writing final server update
[2025-04-28 08:13:56] 2025-04-28 15:13:25,613 | INFO     | total number of processed events: 400 (read)
[2025-04-28 08:13:56] 2025-04-28 15:13:25,638 | INFO     | executing command: lscpu
[2025-04-28 08:13:56] 2025-04-28 15:13:25,820 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-28 08:13:56] 2025-04-28 15:13:25,854 | INFO     | monitor loop #344: job 0:6618080697 is in state 'finished'
[2025-04-28 08:13:56] 2025-04-28 15:13:25,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 08:13:56] 2025-04-28 15:13:28,359 | INFO     | monitor loop #345: job 0:6618080697 is in state 'finished'
[2025-04-28 08:13:56] 2025-04-28 15:13:28,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 08:13:56] 2025-04-28 15:13:30,863 | INFO     | monitor loop #346: job 0:6618080697 is in state 'finished'
[2025-04-28 08:13:56] 2025-04-28 15:13:30,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 08:13:56] 2025-04-28 15:13:33,199 | INFO     | PID=678732 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-28 08:13:56] 2025-04-28 15:13:33,199 | INFO     | .. there are 12 such processes running
[2025-04-28 08:13:56] 2025-04-28 15:13:33,368 | INFO     | monitor loop #347: job 0:6618080697 is in state 'finished'
[2025-04-28 08:13:56] 2025-04-28 15:13:33,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 08:13:56] 2025-04-28 15:13:35,873 | INFO     | monitor loop #348: job 0:6618080697 is in state 'finished'
[2025-04-28 08:13:56] 2025-04-28 15:13:35,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 08:13:56] 2025-04-28 15:13:36,093 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-28 08:13:56] 2025-04-28 15:13:36,093 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6618080697/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 08:13:56] 2025-04-28 15:13:36,094 | INFO     | extracted standard info from prmon json
[2025-04-28 08:13:56] 2025-04-28 15:13:36,094 | INFO     | extracted standard memory fields from prmon json
[2025-04-28 08:13:56] 2025-04-28 15:13:36,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-28 08:13:56] 2025-04-28 15:13:36,100 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-28 08:13:56] 2025-04-28 15:13:36,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-28 08:13:56] 2025-04-28 15:13:36,102 | INFO     | fitting pss+swap vs Time
[2025-04-28 08:13:56] 2025-04-28 15:13:36,102 | INFO     | sum of square deviations: 110984873.29577465
[2025-04-28 08:13:56] 2025-04-28 15:13:36,102 | INFO     | sum of deviations: 20379100340.760555
[2025-04-28 08:13:56] 2025-04-28 15:13:36,102 | INFO     | mean x: 1745850932.1549296
[2025-04-28 08:13:56] 2025-04-28 15:13:36,102 | INFO     | mean y: 2579777.1126760566
[2025-04-28 08:13:56] 2025-04-28 15:13:36,103 | INFO     | -- intersect: -320571479280.26874
[2025-04-28 08:13:56] 2025-04-28 15:13:36,103 | INFO     | intersect: -320571479280.26874
[2025-04-28 08:13:56] 2025-04-28 15:13:36,103 | INFO     | chi2: 1.3310679490635402
[2025-04-28 08:13:56] 2025-04-28 15:13:36,103 | INFO     | -- intersect: -320571479280.26874
[2025-04-28 08:13:56] 2025-04-28 15:13:36,103 | INFO     | current memory leak: 183.62 B/s (using 71 data points, chi2=1.33)
[2025-04-28 08:13:56] 2025-04-28 15:13:36,103 | INFO     | ..............................
[2025-04-28 08:13:56] 2025-04-28 15:13:36,103 | INFO     | . Timing measurements:
[2025-04-28 08:13:56] 2025-04-28 15:13:36,103 | INFO     | . get job = 0 s
[2025-04-28 08:13:56] 2025-04-28 15:13:36,103 | INFO     | . initial setup = 3 s
[2025-04-28 08:13:56] 2025-04-28 15:13:36,103 | INFO     | . payload setup = 7 s
[2025-04-28 08:13:56] 2025-04-28 15:13:36,104 | INFO     | . stage-in = 0 s
[2025-04-28 08:13:56] 2025-04-28 15:13:36,104 | INFO     | . payload execution = 4708 s
[2025-04-28 08:13:56] 2025-04-28 15:13:36,104 | INFO     | . stage-out = 1 s
[2025-04-28 08:13:56] 2025-04-28 15:13:36,104 | INFO     | . log creation = 0 s
[2025-04-28 08:13:56] 2025-04-28 15:13:36,104 | INFO     | ..............................
[2025-04-28 08:13:56] 2025-04-28 15:13:36,448 | INFO     | 
[2025-04-28 08:13:56] 2025-04-28 15:13:36,448 | INFO     | job summary report
[2025-04-28 08:13:56] 2025-04-28 15:13:36,448 | INFO     | --------------------------------------------------
[2025-04-28 08:13:56] 2025-04-28 15:13:36,448 | INFO     | PanDA job id: 6618080697
[2025-04-28 08:13:56] 2025-04-28 15:13:36,448 | INFO     | task id: 44292257
[2025-04-28 08:13:56] 2025-04-28 15:13:36,448 | INFO     | errors: (none)
[2025-04-28 08:13:56] 2025-04-28 15:13:36,448 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | pilot state: finished 
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | transexitcode: 0
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | exeerrorcode: 0
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | exeerrordiag: 
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | exitcode: 0
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | exitmsg: OK
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | cpuconsumptiontime: 33704 s
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | nevents: 400
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | neventsw: 0
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | pid: 685114
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | pgrp: 685114
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | corecount: 12
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | event service: False
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | sizes: {0: 2393558, 1: 2393757, 7: 2393963, 11: 2393991, 4720: 2420118, 4721: 2420117, 4722: 2429236, 4726: 2429292, 4738: 2429462}
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | --------------------------------------------------
[2025-04-28 08:13:56] 2025-04-28 15:13:36,449 | INFO     | 
[2025-04-28 08:13:56] 2025-04-28 15:13:36,450 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-28 08:13:56] 2025-04-28 15:13:36,482 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,482 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,482 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,482 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | job 6618080697 has completed (purged errors)
[2025-04-28 08:13:56] 2025-04-28 15:13:36,483 | INFO     | overall cleanup function is called
[2025-04-28 08:13:56] 2025-04-28 15:13:37,492 | INFO     | --- collectZombieJob: --- 10, [685114]
[2025-04-28 08:13:56] 2025-04-28 15:13:37,492 | INFO     | zombie collector waiting for pid 685114
[2025-04-28 08:13:56] 2025-04-28 15:13:37,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 08:13:56] 2025-04-28 15:13:37,492 | INFO     | collected zombie processes
[2025-04-28 08:13:56] 2025-04-28 15:13:37,492 | INFO     | will attempt to kill all subprocesses of pid=685114
[2025-04-28 08:13:56] 2025-04-28 15:13:38,150 | INFO     | process IDs to be killed: [685114] (in reverse order)
[2025-04-28 08:13:56] 2025-04-28 15:13:38,213 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 08:13:56] 2025-04-28 15:13:38,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 08:13:56] 2025-04-28 15:13:38,220 | INFO     | did not find any defunct processes belonging to 685114
[2025-04-28 08:13:56] 2025-04-28 15:13:38,242 | INFO     | did not find any defunct processes belonging to 685114
[2025-04-28 08:13:56] 2025-04-28 15:13:38,242 | INFO     | ready for new job
[2025-04-28 08:13:56] 2025-04-28 15:13:38,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 08:13:56] 2025-04-28 15:13:38,248 | INFO     | **************************************
[2025-04-28 08:13:56] 2025-04-28 15:13:38,248 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 08:13:56] 2025-04-28 15:13:38,248 | INFO     | **************************************
[2025-04-28 08:13:56] 2025-04-28 15:13:38,248 | INFO     | 
[2025-04-28 08:13:56] 2025-04-28 15:13:38,250 | INFO     | architecture information:
[2025-04-28 08:13:56] 2025-04-28 15:13:38,254 | INFO     | executing command: cat /etc/os-release
[2025-04-28 08:13:56] 2025-04-28 15:13:38,345 | INFO     | cat /etc/os-release:
[2025-04-28 08:13:56] NAME="CentOS Linux"
[2025-04-28 08:13:56] VERSION="7 (Core)"
[2025-04-28 08:13:56] ID="centos"
[2025-04-28 08:13:56] ID_LIKE="rhel fedora"
[2025-04-28 08:13:56] VERSION_ID="7"
[2025-04-28 08:13:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 08:13:56] ANSI_COLOR="0;31"
[2025-04-28 08:13:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 08:13:56] HOME_URL="https://www.centos.org/"
[2025-04-28 08:13:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 08:13:56] 
[2025-04-28 08:13:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 08:13:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 08:13:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 08:13:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 08:13:56] 
[2025-04-28 08:13:56] 2025-04-28 15:13:38,346 | INFO     | **************************************
[2025-04-28 08:13:56] 2025-04-28 15:13:38,849 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-28 08:13:56] 2025-04-28 15:13:38,915 | INFO     | sufficient remaining disk space (2131035684864 B)
[2025-04-28 08:13:56] 2025-04-28 15:13:38,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 08:13:56] 2025-04-28 15:13:38,916 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 08:13:56] 2025-04-28 15:13:38,916 | INFO     | update_server=False
[2025-04-28 08:13:56] 2025-04-28 15:13:38,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 08:13:56] 2025-04-28 15:13:38,917 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 08:13:56] 2025-04-28 15:13:39,123 | INFO     | all data control threads have been joined
[2025-04-28 08:13:56] 2025-04-28 15:13:39,231 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 08:13:56] 2025-04-28 15:13:39,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 08:13:56] 2025-04-28 15:13:39,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 08:13:56] 2025-04-28 15:13:39,383 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 08:13:56] 2025-04-28 15:13:39,383 | INFO     | aborting loop
[2025-04-28 08:13:56] 2025-04-28 15:13:39,494 | INFO     | all job control threads have been joined
[2025-04-28 08:13:56] 2025-04-28 15:13:39,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 08:13:56] 2025-04-28 15:13:39,922 | INFO     | [job] retrieve thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:39,955 | INFO     | all payload control threads have been joined
[2025-04-28 08:13:56] 2025-04-28 15:13:39,984 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:40,129 | INFO     | [data] control thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:40,378 | INFO     | [payload] failed_post thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:40,389 | INFO     | [job] job monitor thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:40,500 | INFO     | [job] control thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:40,621 | INFO     | [data] copytool_in thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:40,924 | INFO     | [data] copytool_out thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:40,961 | INFO     | [payload] control thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:41,069 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:41,087 | INFO     | [job] validate thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:41,212 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:41,413 | INFO     | [payload] validate_post thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:41,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 08:13:56] 2025-04-28 15:13:42,465 | INFO     | [job] queue monitor thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:43,600 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:49,083 | INFO     | job.realtimelogging is not enabled
[2025-04-28 08:13:56] 2025-04-28 15:13:50,089 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 08:13:56] 2025-04-28 15:13:50,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140290906957632)>', '<ExcThread(monitor, started 140290509747968)>']
[2025-04-28 08:13:56] 2025-04-28 15:13:51,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 08:13:56] 2025-04-28 15:13:51,303 | INFO     | [monitor] control thread has ended
[2025-04-28 08:13:56] 2025-04-28 15:13:55,727 | INFO     | all workflow threads have been joined
[2025-04-28 08:13:56] 2025-04-28 15:13:55,727 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 08:13:56] 2025-04-28 15:13:55,727 | INFO     | traces error code: 0
[2025-04-28 08:13:56] 2025-04-28 15:13:55,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 08:13:56] 2025-04-28 15:13:55,874 [wrapper] ==== pilot stdout END ====
[2025-04-28 08:13:56] 2025-04-28 15:13:55,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 08:13:56] 2025-04-28 15:13:55,888 [wrapper] pilotpid: 678732
[2025-04-28 08:13:56] 2025-04-28 15:13:55,890 [wrapper] Pilot exit status: 0
[2025-04-28 08:13:56] 2025-04-28 15:13:55,962 [wrapper] pandaids: 6618080697
[2025-04-28 08:13:56] 2025-04-28 15:13:56,009 [wrapper] cleanup supervisor_pilot  933519 678733
[2025-04-28 08:13:56] 2025-04-28 15:13:56,011 [wrapper] Test setup, not cleaning
[2025-04-28 08:13:56] 2025-04-28 15:13:56,019 [wrapper] apfmon messages muted
[2025-04-28 08:13:56] 2025-04-28 15:13:56,023 [wrapper] ==== wrapper stdout END ====
[2025-04-28 08:13:56] 2025-04-28 15:13:56,025 [wrapper] ==== wrapper stderr END ====
[2025-04-28 08:13:56]  *** Error codes and diagnostics ***
[2025-04-28 08:13:56]     "exeErrorCode": 0,
[2025-04-28 08:13:56]     "exeErrorDiag": "",
[2025-04-28 08:13:56]     "pilotErrorCode": 0,
[2025-04-28 08:13:56]     "pilotErrorDiag": "",
[2025-04-28 08:13:56]  *** Listing of results directory ***
[2025-04-28 08:13:56] total 412440
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc    495897 Apr 27 19:54 pilot3.tar.gz
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc      5111 Apr 27 20:15 queuedata.json
[2025-04-28 08:13:56] -rwx------. 1 boinc boinc     37140 Apr 27 20:16 runpilot2-wrapper.sh
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc       100 Apr 28 06:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 08:13:56] -rwxr-xr-x. 1 boinc boinc      7986 Apr 28 06:54 run_atlas
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc       105 Apr 28 06:54 job.xml
[2025-04-28 08:13:56] -rw-r--r--. 2 boinc boinc 225816511 Apr 28 06:54 EVNT.44292255._003096.pool.root.1
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc      6597 Apr 28 06:54 init_data.xml
[2025-04-28 08:13:56] -rw-r--r--. 2 boinc boinc     17569 Apr 28 06:54 start_atlas.sh
[2025-04-28 08:13:56] drwxrwx--x. 2 boinc boinc      4096 Apr 28 06:54 shared
[2025-04-28 08:13:56] -rw-r--r--. 2 boinc boinc    508887 Apr 28 06:54 input.tar.gz
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc         0 Apr 28 06:54 boinc_lockfile
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc      2551 Apr 28 06:54 pandaJob.out
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc       424 Apr 28 06:54 setup.sh.local
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc    993826 Apr 28 06:54 agis_schedconf.cvmfs.json
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc   1596659 Apr 28 06:54 agis_ddmendpoints.agis.ALL.json
[2025-04-28 08:13:56] drwx------. 4 boinc boinc      4096 Apr 28 06:54 pilot3
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc 191020184 Apr 28 08:12 HITS.44292257._027779.pool.root.1
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc        95 Apr 28 08:12 pilot_heartbeat.json
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc       529 Apr 28 08:12 boinc_task_state.xml
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc      1040 Apr 28 08:13 memory_monitor_summary.json
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc    370255 Apr 28 08:13 log.44292257._027779.job.log.tgz.1
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc      7727 Apr 28 08:13 heartbeat.json
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc      8192 Apr 28 08:13 boinc_mmap_file
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc        27 Apr 28 08:13 wrapper_checkpoint.txt
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc      4424 Apr 28 08:13 pilotlog.txt
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc    458168 Apr 28 08:13 log.44292257._027779.job.log.1
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc       357 Apr 28 08:13 output.list
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc       620 Apr 28 08:13 runtime_log
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc    849920 Apr 28 08:13 result.tar.gz
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc       660 Apr 28 08:13 YknMDme9TT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmEQCLDmTx2xym.diag
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc     11144 Apr 28 08:13 runtime_log.err
[2025-04-28 08:13:56] -rw-r--r--. 1 boinc boinc     22242 Apr 28 08:13 stderr.txt
[2025-04-28 08:13:56] HITS file was successfully produced:
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc 191020184 Apr 28 08:12 shared/HITS.pool.root.1
[2025-04-28 08:13:56]  *** Contents of shared directory: ***
[2025-04-28 08:13:56] total 408428
[2025-04-28 08:13:56] -rw-r--r--. 2 boinc boinc 225816511 Apr 28 06:54 ATLAS.root_0
[2025-04-28 08:13:56] -rw-r--r--. 2 boinc boinc     17569 Apr 28 06:54 start_atlas.sh
[2025-04-28 08:13:56] -rw-r--r--. 2 boinc boinc    508887 Apr 28 06:54 input.tar.gz
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc 191020184 Apr 28 08:12 HITS.pool.root.1
[2025-04-28 08:13:56] -rw-------. 1 boinc boinc    849920 Apr 28 08:13 result.tar.gz
08:13:57 (675143): run_atlas exited; CPU time 33760.429540
08:13:57 (675143): called boinc_finish(0)

</stderr_txt>
]]>

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