Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:06:07 (506167): wrapper (7.7.26015): starting
03:06:07 (506167): wrapper: running run_atlas (--nthreads 12)
[2025-04-28 03:06:07] Arguments: --nthreads 12
[2025-04-28 03:06:07] Threads: 12
[2025-04-28 03:06:07] Checking for CVMFS
[2025-04-28 03:06:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 03:06:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 03:06:08] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 03:06:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 03:06:08] 2.11.5.0 2772 35584 229336 145368 1 190 35859011 45568000 9897 130560 0 230910902 99.778 196975407 29154 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-28 03:06:08] CVMFS is ok
[2025-04-28 03:06:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 03:06:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-28 03:06:08] Further information can be found at the LHC@home message board.
[2025-04-28 03:06:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 03:06:08] Checking for apptainer binary...
[2025-04-28 03:06:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 03:06:08] Running /usr/bin/apptainer --version
[2025-04-28 03:06:08] apptainer version 1.3.5-1.el9
[2025-04-28 03:06:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 03:06:09] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0154.triumf.lcg
[2025-04-28 03:06:09] apptainer works
[2025-04-28 03:06:09] Set ATHENA_PROC_NUMBER=12
[2025-04-28 03:06:09] Set ATHENA_CORE_NUMBER=12
[2025-04-28 03:06:09] Starting ATLAS job with PandaID=6608807413
[2025-04-28 03:06:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 05:45:05]  *** The last 200 lines of the pilot log: ***
[2025-04-28 05:45:05] 2025-04-28 12:44:46,721 | INFO     | sum of deviations: 101273659043.93549
[2025-04-28 05:45:05] 2025-04-28 12:44:46,721 | INFO     | mean x: 1745839577.064516
[2025-04-28 05:45:05] 2025-04-28 12:44:46,721 | INFO     | mean y: 2563632.206451613
[2025-04-28 05:45:05] 2025-04-28 12:44:46,721 | INFO     | -- intersect: -153125405468.84097
[2025-04-28 05:45:05] 2025-04-28 12:44:46,721 | INFO     | intersect: -153125405468.84097
[2025-04-28 05:45:05] 2025-04-28 12:44:46,721 | INFO     | chi2: 7.4482460128380525
[2025-04-28 05:45:05] 2025-04-28 12:44:46,722 | INFO     | sum of square deviations: 1046463518.8333342
[2025-04-28 05:45:05] 2025-04-28 12:44:46,722 | INFO     | sum of deviations: 108290218327.53337
[2025-04-28 05:45:05] 2025-04-28 12:44:46,722 | INFO     | mean x: 1745839424.5666666
[2025-04-28 05:45:05] 2025-04-28 12:44:46,722 | INFO     | mean y: 2573129.7466666666
[2025-04-28 05:45:05] 2025-04-28 12:44:46,723 | INFO     | -- intersect: -180660516455.93997
[2025-04-28 05:45:05] 2025-04-28 12:44:46,723 | INFO     | intersect: -180660516455.93997
[2025-04-28 05:45:05] 2025-04-28 12:44:46,723 | INFO     | chi2: 6.738967451944438
[2025-04-28 05:45:05] 2025-04-28 12:44:46,723 | INFO     | current chi2=6.738967451944438 (change=9.522759582203348 %)
[2025-04-28 05:45:05] 2025-04-28 12:44:46,723 | INFO     | right removable region: 149
[2025-04-28 05:45:05] 2025-04-28 12:44:46,723 | INFO     | sum of square deviations: 1046457418.8333342
[2025-04-28 05:45:05] 2025-04-28 12:44:46,724 | INFO     | sum of deviations: 58460016792.63335
[2025-04-28 05:45:05] 2025-04-28 12:44:46,724 | INFO     | mean x: 1745839729.5666666
[2025-04-28 05:45:05] 2025-04-28 12:44:46,724 | INFO     | mean y: 2623797.8866666667
[2025-04-28 05:45:05] 2025-04-28 12:44:46,724 | INFO     | -- intersect: -97528167298.70627
[2025-04-28 05:45:05] 2025-04-28 12:44:46,724 | INFO     | intersect: -97528167298.70627
[2025-04-28 05:45:05] 2025-04-28 12:44:46,725 | INFO     | chi2: 4.535965537029182
[2025-04-28 05:45:05] 2025-04-28 12:44:46,725 | INFO     | current chi2=4.535965537029182 (change=39.10021863924962 %)
[2025-04-28 05:45:05] 2025-04-28 12:44:46,725 | INFO     | sum of square deviations: 945252471.3103426
[2025-04-28 05:45:05] 2025-04-28 12:44:46,726 | INFO     | sum of deviations: 22368464373.275867
[2025-04-28 05:45:05] 2025-04-28 12:44:46,726 | INFO     | mean x: 1745839882.0689654
[2025-04-28 05:45:05] 2025-04-28 12:44:46,726 | INFO     | mean y: 2678205.372413793
[2025-04-28 05:45:05] 2025-04-28 12:44:46,726 | INFO     | -- intersect: -41310895034.34508
[2025-04-28 05:45:05] 2025-04-28 12:44:46,726 | INFO     | intersect: -41310895034.34508
[2025-04-28 05:45:05] 2025-04-28 12:44:46,726 | INFO     | chi2: 2.587835567141197
[2025-04-28 05:45:05] 2025-04-28 12:44:46,726 | INFO     | current chi2=2.587835567141197 (change=42.948517884108696 %)
[2025-04-28 05:45:05] 2025-04-28 12:44:46,726 | INFO     | sum of square deviations: 850791836.2857145
[2025-04-28 05:45:05] 2025-04-28 12:44:46,727 | INFO     | sum of deviations: -9671291418.857143
[2025-04-28 05:45:05] 2025-04-28 12:44:46,727 | INFO     | mean x: 1745840034.5714285
[2025-04-28 05:45:05] 2025-04-28 12:44:46,727 | INFO     | mean y: 2729794.4857142856
[2025-04-28 05:45:05] 2025-04-28 12:44:46,727 | INFO     | -- intersect: 19848392417.155407
[2025-04-28 05:45:05] 2025-04-28 12:44:46,727 | INFO     | intersect: 19848392417.155407
[2025-04-28 05:45:05] 2025-04-28 12:44:46,728 | INFO     | chi2: 0.9852334590705729
[2025-04-28 05:45:05] 2025-04-28 12:44:46,728 | INFO     | current chi2=0.9852334590705729 (change=61.92828201372282 %)
[2025-04-28 05:45:05] 2025-04-28 12:44:46,728 | INFO     | sum of square deviations: 762842951.2592596
[2025-04-28 05:45:05] 2025-04-28 12:44:46,729 | INFO     | sum of deviations: -20178425411.111103
[2025-04-28 05:45:05] 2025-04-28 12:44:46,729 | INFO     | mean x: 1745840187.074074
[2025-04-28 05:45:05] 2025-04-28 12:44:46,729 | INFO     | mean y: 2747851.9111111113
[2025-04-28 05:45:05] 2025-04-28 12:44:46,729 | INFO     | -- intersect: 46183034287.59422
[2025-04-28 05:45:05] 2025-04-28 12:44:46,729 | INFO     | intersect: 46183034287.59422
[2025-04-28 05:45:05] 2025-04-28 12:44:46,729 | INFO     | chi2: 0.7552009954707396
[2025-04-28 05:45:05] 2025-04-28 12:44:46,729 | INFO     | current chi2=0.7552009954707396 (change=23.348015790778774 %)
[2025-04-28 05:45:05] 2025-04-28 12:44:46,729 | INFO     | left removable region: 40
[2025-04-28 05:45:05] 2025-04-28 12:44:46,729 | INFO     | sum of square deviations: 401502861.4128451
[2025-04-28 05:45:05] 2025-04-28 12:44:46,730 | INFO     | sum of deviations: -6130148531.908258
[2025-04-28 05:45:05] 2025-04-28 12:44:46,730 | INFO     | mean x: 1745840614.0733945
[2025-04-28 05:45:05] 2025-04-28 12:44:46,730 | INFO     | mean y: 2756181.23853211
[2025-04-28 05:45:05] 2025-04-28 12:44:46,730 | INFO     | -- intersect: 26658263042.75312
[2025-04-28 05:45:05] 2025-04-28 12:44:46,730 | INFO     | intersect: 26658263042.75312
[2025-04-28 05:45:05] 2025-04-28 12:44:46,730 | INFO     | chi2: 0.02919693275170557
[2025-04-28 05:45:05] 2025-04-28 12:44:46,730 | INFO     | -- intersect: 26658263042.75312
[2025-04-28 05:45:05] 2025-04-28 12:44:46,730 | INFO     | current memory leak: -15.27 B/s (using 109 data points, chi2=0.03)
[2025-04-28 05:45:05] 2025-04-28 12:44:46,731 | INFO     | ..............................
[2025-04-28 05:45:05] 2025-04-28 12:44:46,731 | INFO     | . Timing measurements:
[2025-04-28 05:45:05] 2025-04-28 12:44:46,731 | INFO     | . get job = 0 s
[2025-04-28 05:45:05] 2025-04-28 12:44:46,731 | INFO     | . initial setup = 9 s
[2025-04-28 05:45:05] 2025-04-28 12:44:46,731 | INFO     | . payload setup = 23 s
[2025-04-28 05:45:05] 2025-04-28 12:44:46,731 | INFO     | . stage-in = 0 s
[2025-04-28 05:45:05] 2025-04-28 12:44:46,731 | INFO     | . payload execution = 9407 s
[2025-04-28 05:45:05] 2025-04-28 12:44:46,731 | INFO     | . stage-out = 0 s
[2025-04-28 05:45:05] 2025-04-28 12:44:46,731 | INFO     | . log creation = 0 s
[2025-04-28 05:45:05] 2025-04-28 12:44:46,731 | INFO     | ..............................
[2025-04-28 05:45:05] 2025-04-28 12:44:46,803 | INFO     | 
[2025-04-28 05:45:05] 2025-04-28 12:44:46,803 | INFO     | job summary report
[2025-04-28 05:45:05] 2025-04-28 12:44:46,803 | INFO     | --------------------------------------------------
[2025-04-28 05:45:05] 2025-04-28 12:44:46,803 | INFO     | PanDA job id: 6608807413
[2025-04-28 05:45:05] 2025-04-28 12:44:46,803 | INFO     | task id: 44075483
[2025-04-28 05:45:05] 2025-04-28 12:44:46,803 | INFO     | errors: (none)
[2025-04-28 05:45:05] 2025-04-28 12:44:46,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 05:45:05] 2025-04-28 12:44:46,803 | INFO     | pilot state: finished 
[2025-04-28 05:45:05] 2025-04-28 12:44:46,803 | INFO     | transexitcode: 0
[2025-04-28 05:45:05] 2025-04-28 12:44:46,803 | INFO     | exeerrorcode: 0
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | exeerrordiag: 
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | exitcode: 0
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | exitmsg: OK
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | cpuconsumptiontime: 32243 s
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | nevents: 400
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | neventsw: 0
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | pid: 518568
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | pgrp: 518568
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | corecount: 12
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | event service: False
[2025-04-28 05:45:05] 2025-04-28 12:44:46,804 | INFO     | sizes: {0: 2393536, 1: 2393620, 2: 2393819, 10: 2394025, 12: 2394053, 9435: 2422330, 9436: 2431265, 9437: 2431321, 9441: 2431491}
[2025-04-28 05:45:05] 2025-04-28 12:44:46,805 | INFO     | --------------------------------------------------
[2025-04-28 05:45:05] 2025-04-28 12:44:46,805 | INFO     | 
[2025-04-28 05:45:05] 2025-04-28 12:44:46,805 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-28 05:45:05] 2025-04-28 12:44:46,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,822 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,822 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,822 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | job 6608807413 has completed (purged errors)
[2025-04-28 05:45:05] 2025-04-28 12:44:46,823 | INFO     | overall cleanup function is called
[2025-04-28 05:45:05] 2025-04-28 12:44:47,831 | INFO     | --- collectZombieJob: --- 10, [518568]
[2025-04-28 05:45:05] 2025-04-28 12:44:47,831 | INFO     | zombie collector waiting for pid 518568
[2025-04-28 05:45:05] 2025-04-28 12:44:47,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 05:45:05] 2025-04-28 12:44:47,832 | INFO     | collected zombie processes
[2025-04-28 05:45:05] 2025-04-28 12:44:47,832 | INFO     | will attempt to kill all subprocesses of pid=518568
[2025-04-28 05:45:05] 2025-04-28 12:44:48,013 | INFO     | process IDs to be killed: [518568] (in reverse order)
[2025-04-28 05:45:05] 2025-04-28 12:44:48,082 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 05:45:05] 2025-04-28 12:44:48,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 05:45:05] 2025-04-28 12:44:48,092 | INFO     | did not find any defunct processes belonging to 518568
[2025-04-28 05:45:05] 2025-04-28 12:44:48,100 | INFO     | did not find any defunct processes belonging to 518568
[2025-04-28 05:45:05] 2025-04-28 12:44:48,101 | INFO     | ready for new job
[2025-04-28 05:45:05] 2025-04-28 12:44:48,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 05:45:05] 2025-04-28 12:44:48,102 | INFO     | **************************************
[2025-04-28 05:45:05] 2025-04-28 12:44:48,102 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 05:45:05] 2025-04-28 12:44:48,102 | INFO     | **************************************
[2025-04-28 05:45:05] 2025-04-28 12:44:48,103 | INFO     | 
[2025-04-28 05:45:05] 2025-04-28 12:44:48,105 | INFO     | architecture information:
[2025-04-28 05:45:05] 2025-04-28 12:44:48,105 | INFO     | executing command: cat /etc/os-release
[2025-04-28 05:45:05] 2025-04-28 12:44:48,121 | INFO     | cat /etc/os-release:
[2025-04-28 05:45:05] NAME="CentOS Linux"
[2025-04-28 05:45:05] VERSION="7 (Core)"
[2025-04-28 05:45:05] ID="centos"
[2025-04-28 05:45:05] ID_LIKE="rhel fedora"
[2025-04-28 05:45:05] VERSION_ID="7"
[2025-04-28 05:45:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 05:45:05] ANSI_COLOR="0;31"
[2025-04-28 05:45:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 05:45:05] HOME_URL="https://www.centos.org/"
[2025-04-28 05:45:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 05:45:05] 
[2025-04-28 05:45:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 05:45:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 05:45:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 05:45:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 05:45:05] 
[2025-04-28 05:45:05] 2025-04-28 12:44:48,121 | INFO     | **************************************
[2025-04-28 05:45:05] 2025-04-28 12:44:48,623 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-28 05:45:05] 2025-04-28 12:44:48,639 | INFO     | sufficient remaining disk space (2037387362304 B)
[2025-04-28 05:45:05] 2025-04-28 12:44:48,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 05:45:05] 2025-04-28 12:44:48,639 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 05:45:05] 2025-04-28 12:44:48,639 | INFO     | update_server=False
[2025-04-28 05:45:05] 2025-04-28 12:44:48,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 05:45:05] 2025-04-28 12:44:48,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 05:45:05] 2025-04-28 12:44:48,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 05:45:05] 2025-04-28 12:44:48,640 | INFO     | aborting loop
[2025-04-28 05:45:05] 2025-04-28 12:44:48,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 05:45:05] 2025-04-28 12:44:48,842 | INFO     | all payload control threads have been joined
[2025-04-28 05:45:05] 2025-04-28 12:44:48,922 | INFO     | all data control threads have been joined
[2025-04-28 05:45:05] 2025-04-28 12:44:49,364 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 05:45:05] 2025-04-28 12:44:49,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 05:45:05] 2025-04-28 12:44:49,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 05:45:05] 2025-04-28 12:44:49,642 | INFO     | [job] job monitor thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:49,645 | INFO     | [job] retrieve thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:49,645 | INFO     | [job] queue monitor thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:49,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 05:45:05] 2025-04-28 12:44:49,795 | INFO     | [data] copytool_in thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:49,847 | INFO     | [payload] control thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:49,869 | INFO     | [payload] validate_post thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:49,877 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:49,894 | INFO     | [job] validate thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:49,927 | INFO     | [data] control thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:50,180 | INFO     | all job control threads have been joined
[2025-04-28 05:45:05] 2025-04-28 12:44:50,195 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:50,646 | INFO     | [payload] failed_post thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:50,810 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:51,185 | INFO     | [job] control thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:51,677 | INFO     | [data] copytool_out thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:52,681 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:44:59,434 | INFO     | job.realtimelogging is not enabled
[2025-04-28 05:45:05] 2025-04-28 12:45:00,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 05:45:05] 2025-04-28 12:45:00,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306833913664)>', '<ExcThread(monitor, started 140306297116416)>']
[2025-04-28 05:45:05] 2025-04-28 12:45:01,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 05:45:05] 2025-04-28 12:45:01,427 | INFO     | [monitor] control thread has ended
[2025-04-28 05:45:05] 2025-04-28 12:45:05,551 | INFO     | all workflow threads have been joined
[2025-04-28 05:45:05] 2025-04-28 12:45:05,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 05:45:05] 2025-04-28 12:45:05,551 | INFO     | traces error code: 0
[2025-04-28 05:45:05] 2025-04-28 12:45:05,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 05:45:05] 2025-04-28 12:45:05,657 [wrapper] ==== pilot stdout END ====
[2025-04-28 05:45:05] 2025-04-28 12:45:05,661 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 05:45:05] 2025-04-28 12:45:05,664 [wrapper] pilotpid: 512218
[2025-04-28 05:45:05] 2025-04-28 12:45:05,667 [wrapper] Pilot exit status: 0
[2025-04-28 05:45:05] 2025-04-28 12:45:05,680 [wrapper] pandaids: 6608807413
[2025-04-28 05:45:05] 2025-04-28 12:45:05,731 [wrapper] cleanup supervisor_pilot  792033 512219
[2025-04-28 05:45:05] 2025-04-28 12:45:05,736 [wrapper] Test setup, not cleaning
[2025-04-28 05:45:05] 2025-04-28 12:45:05,740 [wrapper] apfmon messages muted
[2025-04-28 05:45:05] 2025-04-28 12:45:05,743 [wrapper] ==== wrapper stdout END ====
[2025-04-28 05:45:05] 2025-04-28 12:45:05,747 [wrapper] ==== wrapper stderr END ====
[2025-04-28 05:45:05]  *** Error codes and diagnostics ***
[2025-04-28 05:45:05]     "exeErrorCode": 0,
[2025-04-28 05:45:05]     "exeErrorDiag": "",
[2025-04-28 05:45:05]     "pilotErrorCode": 0,
[2025-04-28 05:45:05]     "pilotErrorDiag": "",
[2025-04-28 05:45:05]  *** Listing of results directory ***
[2025-04-28 05:45:05] total 413996
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc    495897 Apr 20 01:22 pilot3.tar.gz
[2025-04-28 05:45:05] -rwx------. 1 boinc boinc     37140 Apr 20 01:44 runpilot2-wrapper.sh
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc      5111 Apr 20 01:44 queuedata.json
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc       100 Apr 28 03:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 05:45:05] -rwxr-xr-x. 1 boinc boinc      7986 Apr 28 03:06 run_atlas
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc       105 Apr 28 03:06 job.xml
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc      6598 Apr 28 03:06 init_data.xml
[2025-04-28 05:45:05] -rw-r--r--. 2 boinc boinc 224842922 Apr 28 03:06 EVNT.44075481._003370.pool.root.1
[2025-04-28 05:45:05] -rw-r--r--. 2 boinc boinc     17569 Apr 28 03:06 start_atlas.sh
[2025-04-28 05:45:05] drwxrwx--x. 2 boinc boinc      4096 Apr 28 03:06 shared
[2025-04-28 05:45:05] -rw-r--r--. 2 boinc boinc    508896 Apr 28 03:06 input.tar.gz
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc         0 Apr 28 03:06 boinc_lockfile
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc      2579 Apr 28 03:06 pandaJob.out
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc       424 Apr 28 03:06 setup.sh.local
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc    992198 Apr 28 03:06 agis_schedconf.cvmfs.json
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc   1596659 Apr 28 03:06 agis_ddmendpoints.agis.ALL.json
[2025-04-28 05:45:05] drwx------. 4 boinc boinc      4096 Apr 28 03:07 pilot3
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc 192789590 Apr 28 05:44 HITS.44075483._095275.pool.root.1
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc      8192 Apr 28 05:44 boinc_mmap_file
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc        27 Apr 28 05:44 wrapper_checkpoint.txt
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc       529 Apr 28 05:44 boinc_task_state.xml
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc      1039 Apr 28 05:44 memory_monitor_summary.json
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc    403361 Apr 28 05:44 log.44075483._095275.job.log.tgz.1
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc        95 Apr 28 05:44 pilot_heartbeat.json
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc      7729 Apr 28 05:44 heartbeat.json
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc      4424 Apr 28 05:45 pilotlog.txt
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc    822011 Apr 28 05:45 log.44075483._095275.job.log.1
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc       357 Apr 28 05:45 output.list
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc       620 Apr 28 05:45 runtime_log
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc   1249280 Apr 28 05:45 result.tar.gz
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc     11144 Apr 28 05:45 runtime_log.err
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc       659 Apr 28 05:45 6E9NDmVTfQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCb7KDmVWpmEn.diag
[2025-04-28 05:45:05] -rw-r--r--. 1 boinc boinc     20951 Apr 28 05:45 stderr.txt
[2025-04-28 05:45:05] HITS file was successfully produced:
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc 192789590 Apr 28 05:44 shared/HITS.pool.root.1
[2025-04-28 05:45:05]  *** Contents of shared directory: ***
[2025-04-28 05:45:05] total 409596
[2025-04-28 05:45:05] -rw-r--r--. 2 boinc boinc 224842922 Apr 28 03:06 ATLAS.root_0
[2025-04-28 05:45:05] -rw-r--r--. 2 boinc boinc     17569 Apr 28 03:06 start_atlas.sh
[2025-04-28 05:45:05] -rw-r--r--. 2 boinc boinc    508896 Apr 28 03:06 input.tar.gz
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc 192789590 Apr 28 05:44 HITS.pool.root.1
[2025-04-28 05:45:05] -rw-------. 1 boinc boinc   1249280 Apr 28 05:45 result.tar.gz
05:45:07 (506167): run_atlas exited; CPU time 32417.273805
05:45:07 (506167): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN