Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:44:16 (3870528): wrapper (7.7.26015): starting
02:44:16 (3870528): wrapper: running run_atlas (--nthreads 12)
[2025-04-28 02:44:16] Arguments: --nthreads 12
[2025-04-28 02:44:16] Threads: 12
[2025-04-28 02:44:16] Checking for CVMFS
[2025-04-28 02:44:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 02:44:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 02:44:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 02:44:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 02:44:16] 2.11.5.0 2091750 33084 351920 145368 2 130 45294301 45568000 7302 130560 0 242397183 99.802 174651595 31279 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-28 02:44:16] CVMFS is ok
[2025-04-28 02:44:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-28 02:44:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-28 02:44:16] Further information can be found at the LHC@home message board.
[2025-04-28 02:44:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 02:44:16] Checking for apptainer binary...
[2025-04-28 02:44:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 02:44:16] Running /usr/bin/apptainer --version
[2025-04-28 02:44:16] apptainer version 1.3.5-1.el9
[2025-04-28 02:44:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 02:44:17] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0052.triumf.lcg
[2025-04-28 02:44:17] apptainer works
[2025-04-28 02:44:17] Set ATHENA_PROC_NUMBER=12
[2025-04-28 02:44:17] Set ATHENA_CORE_NUMBER=12
[2025-04-28 02:44:17] Starting ATLAS job with PandaID=6617827080
[2025-04-28 02:44:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 05:28:55]  *** The last 200 lines of the pilot log: ***
[2025-04-28 05:28:56] 2025-04-28 12:28:43,721 | INFO     | sum of square deviations: 1294060872.8571448
[2025-04-28 05:28:56] 2025-04-28 12:28:43,721 | INFO     | sum of deviations: 65834961478.57151
[2025-04-28 05:28:56] 2025-04-28 12:28:43,721 | INFO     | mean x: 1745838378.2857144
[2025-04-28 05:28:56] 2025-04-28 12:28:43,721 | INFO     | mean y: 2605847.900621118
[2025-04-28 05:28:56] 2025-04-28 12:28:43,721 | INFO     | -- intersect: -88816401660.21065
[2025-04-28 05:28:56] 2025-04-28 12:28:43,722 | INFO     | intersect: -88816401660.21065
[2025-04-28 05:28:56] 2025-04-28 12:28:43,722 | INFO     | chi2: 4.962433077817922
[2025-04-28 05:28:56] 2025-04-28 12:28:43,722 | INFO     | sum of square deviations: 1177216897.4358943
[2025-04-28 05:28:56] 2025-04-28 12:28:43,723 | INFO     | sum of deviations: 75284360208.3077
[2025-04-28 05:28:56] 2025-04-28 12:28:43,723 | INFO     | mean x: 1745838225.7948718
[2025-04-28 05:28:56] 2025-04-28 12:28:43,723 | INFO     | mean y: 2617786.1346153845
[2025-04-28 05:28:56] 2025-04-28 12:28:43,723 | INFO     | -- intersect: -111645723434.97095
[2025-04-28 05:28:56] 2025-04-28 12:28:43,723 | INFO     | intersect: -111645723434.97095
[2025-04-28 05:28:56] 2025-04-28 12:28:43,723 | INFO     | chi2: 4.155748979168412
[2025-04-28 05:28:56] 2025-04-28 12:28:43,723 | INFO     | current chi2=4.155748979168412 (change=16.2558181843376 %)
[2025-04-28 05:28:56] 2025-04-28 12:28:43,723 | INFO     | right removable region: 155
[2025-04-28 05:28:56] 2025-04-28 12:28:43,723 | INFO     | sum of square deviations: 1177188837.4358943
[2025-04-28 05:28:56] 2025-04-28 12:28:43,724 | INFO     | sum of deviations: 25284534470.94872
[2025-04-28 05:28:56] 2025-04-28 12:28:43,724 | INFO     | mean x: 1745838530.7948718
[2025-04-28 05:28:56] 2025-04-28 12:28:43,724 | INFO     | mean y: 2658557.185897436
[2025-04-28 05:28:56] 2025-04-28 12:28:43,724 | INFO     | -- intersect: -37495755553.45357
[2025-04-28 05:28:56] 2025-04-28 12:28:43,724 | INFO     | intersect: -37495755553.45357
[2025-04-28 05:28:56] 2025-04-28 12:28:43,724 | INFO     | chi2: 2.619401906638251
[2025-04-28 05:28:56] 2025-04-28 12:28:43,725 | INFO     | current chi2=2.619401906638251 (change=47.21537065462951 %)
[2025-04-28 05:28:56] 2025-04-28 12:28:43,725 | INFO     | sum of square deviations: 1067572751.9867578
[2025-04-28 05:28:56] 2025-04-28 12:28:43,725 | INFO     | sum of deviations: -3849868965.8741684
[2025-04-28 05:28:56] 2025-04-28 12:28:43,725 | INFO     | mean x: 1745838683.3046358
[2025-04-28 05:28:56] 2025-04-28 12:28:43,725 | INFO     | mean y: 2699099.105960265
[2025-04-28 05:28:56] 2025-04-28 12:28:43,726 | INFO     | -- intersect: 6298523110.883013
[2025-04-28 05:28:56] 2025-04-28 12:28:43,726 | INFO     | intersect: 6298523110.883013
[2025-04-28 05:28:56] 2025-04-28 12:28:43,726 | INFO     | chi2: 1.499961062807993
[2025-04-28 05:28:56] 2025-04-28 12:28:43,726 | INFO     | current chi2=1.499961062807993 (change=42.73650565013721 %)
[2025-04-28 05:28:56] 2025-04-28 12:28:43,726 | INFO     | sum of square deviations: 964980054.0068501
[2025-04-28 05:28:56] 2025-04-28 12:28:43,727 | INFO     | sum of deviations: -20276250438.15069
[2025-04-28 05:28:56] 2025-04-28 12:28:43,727 | INFO     | mean x: 1745838835.8150685
[2025-04-28 05:28:56] 2025-04-28 12:28:43,727 | INFO     | mean y: 2723242.0684931506
[2025-04-28 05:28:56] 2025-04-28 12:28:43,727 | INFO     | -- intersect: 36686450861.773766
[2025-04-28 05:28:56] 2025-04-28 12:28:43,727 | INFO     | intersect: 36686450861.773766
[2025-04-28 05:28:56] 2025-04-28 12:28:43,727 | INFO     | chi2: 0.975924766969312
[2025-04-28 05:28:56] 2025-04-28 12:28:43,727 | INFO     | current chi2=0.975924766969312 (change=34.936659946203 %)
[2025-04-28 05:28:56] 2025-04-28 12:28:43,727 | INFO     | sum of square deviations: 869178180.9929078
[2025-04-28 05:28:56] 2025-04-28 12:28:43,728 | INFO     | sum of deviations: -15848846165.439716
[2025-04-28 05:28:56] 2025-04-28 12:28:43,728 | INFO     | mean x: 1745838988.326241
[2025-04-28 05:28:56] 2025-04-28 12:28:43,728 | INFO     | mean y: 2716097.2269503544
[2025-04-28 05:28:56] 2025-04-28 12:28:43,728 | INFO     | -- intersect: 31836848799.455093
[2025-04-28 05:28:56] 2025-04-28 12:28:43,728 | INFO     | intersect: 31836848799.455093
[2025-04-28 05:28:56] 2025-04-28 12:28:43,728 | INFO     | chi2: 0.9443371956691926
[2025-04-28 05:28:56] 2025-04-28 12:28:43,728 | INFO     | current chi2=0.9443371956691926 (change=3.236680978823097 %)
[2025-04-28 05:28:56] 2025-04-28 12:28:43,728 | INFO     | left removable region: 40
[2025-04-28 05:28:56] 2025-04-28 12:28:43,729 | INFO     | sum of square deviations: 471569683.77391285
[2025-04-28 05:28:56] 2025-04-28 12:28:43,738 | INFO     | sum of deviations: 67637862.61739142
[2025-04-28 05:28:56] 2025-04-28 12:28:43,738 | INFO     | mean x: 1745839415.3391304
[2025-04-28 05:28:56] 2025-04-28 12:28:43,738 | INFO     | mean y: 2724881.5739130434
[2025-04-28 05:28:56] 2025-04-28 12:28:43,738 | INFO     | -- intersect: -247683171.7634366
[2025-04-28 05:28:56] 2025-04-28 12:28:43,738 | INFO     | intersect: -247683171.7634366
[2025-04-28 05:28:56] 2025-04-28 12:28:43,739 | INFO     | chi2: 0.0013024849024240134
[2025-04-28 05:28:56] 2025-04-28 12:28:43,739 | INFO     | -- intersect: -247683171.7634366
[2025-04-28 05:28:56] 2025-04-28 12:28:43,739 | INFO     | current memory leak: 0.14 B/s (using 115 data points, chi2=0.00)
[2025-04-28 05:28:56] 2025-04-28 12:28:43,739 | INFO     | ..............................
[2025-04-28 05:28:56] 2025-04-28 12:28:43,739 | INFO     | . Timing measurements:
[2025-04-28 05:28:56] 2025-04-28 12:28:43,739 | INFO     | . get job = 0 s
[2025-04-28 05:28:56] 2025-04-28 12:28:43,739 | INFO     | . initial setup = 3 s
[2025-04-28 05:28:56] 2025-04-28 12:28:43,739 | INFO     | . payload setup = 7 s
[2025-04-28 05:28:56] 2025-04-28 12:28:43,740 | INFO     | . stage-in = 0 s
[2025-04-28 05:28:56] 2025-04-28 12:28:43,740 | INFO     | . payload execution = 9798 s
[2025-04-28 05:28:56] 2025-04-28 12:28:43,740 | INFO     | . stage-out = 1 s
[2025-04-28 05:28:56] 2025-04-28 12:28:43,740 | INFO     | . log creation = 0 s
[2025-04-28 05:28:56] 2025-04-28 12:28:43,740 | INFO     | ..............................
[2025-04-28 05:28:56] 2025-04-28 12:28:43,891 | INFO     | 
[2025-04-28 05:28:56] 2025-04-28 12:28:43,891 | INFO     | job summary report
[2025-04-28 05:28:56] 2025-04-28 12:28:43,891 | INFO     | --------------------------------------------------
[2025-04-28 05:28:56] 2025-04-28 12:28:43,891 | INFO     | PanDA job id: 6617827080
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | task id: 44292257
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | errors: (none)
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | pilot state: finished 
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | transexitcode: 0
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | exeerrorcode: 0
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | exeerrordiag: 
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | exitcode: 0
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | exitmsg: OK
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | cpuconsumptiontime: 36127 s
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | nevents: 400
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | neventsw: 0
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | pid: 3883825
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | pgrp: 3883825
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | corecount: 12
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | event service: False
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | sizes: {0: 2393729, 5: 2393935, 11: 2393991, 9809: 2422372, 9812: 2431307, 9814: 2431363, 9837: 2431689}
[2025-04-28 05:28:56] 2025-04-28 12:28:43,892 | INFO     | --------------------------------------------------
[2025-04-28 05:28:56] 2025-04-28 12:28:43,893 | INFO     | 
[2025-04-28 05:28:56] 2025-04-28 12:28:43,893 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-28 05:28:56] 2025-04-28 12:28:43,909 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,909 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,909 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,909 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,910 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 05:28:56] 2025-04-28 12:28:43,911 | INFO     | job 6617827080 has completed (purged errors)
[2025-04-28 05:28:56] 2025-04-28 12:28:43,911 | INFO     | overall cleanup function is called
[2025-04-28 05:28:56] 2025-04-28 12:28:44,918 | INFO     | --- collectZombieJob: --- 10, [3883825]
[2025-04-28 05:28:56] 2025-04-28 12:28:44,918 | INFO     | zombie collector waiting for pid 3883825
[2025-04-28 05:28:56] 2025-04-28 12:28:44,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 05:28:56] 2025-04-28 12:28:44,918 | INFO     | collected zombie processes
[2025-04-28 05:28:56] 2025-04-28 12:28:44,918 | INFO     | will attempt to kill all subprocesses of pid=3883825
[2025-04-28 05:28:56] 2025-04-28 12:28:45,425 | INFO     | process IDs to be killed: [3883825] (in reverse order)
[2025-04-28 05:28:56] 2025-04-28 12:28:45,491 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 05:28:56] 2025-04-28 12:28:45,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 05:28:56] 2025-04-28 12:28:45,498 | INFO     | did not find any defunct processes belonging to 3883825
[2025-04-28 05:28:56] 2025-04-28 12:28:45,504 | INFO     | did not find any defunct processes belonging to 3883825
[2025-04-28 05:28:56] 2025-04-28 12:28:45,505 | INFO     | ready for new job
[2025-04-28 05:28:56] 2025-04-28 12:28:45,505 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 05:28:56] 2025-04-28 12:28:45,517 | INFO     | **************************************
[2025-04-28 05:28:56] 2025-04-28 12:28:45,518 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 05:28:56] 2025-04-28 12:28:45,518 | INFO     | **************************************
[2025-04-28 05:28:56] 2025-04-28 12:28:45,518 | INFO     | 
[2025-04-28 05:28:56] 2025-04-28 12:28:45,526 | INFO     | architecture information:
[2025-04-28 05:28:56] 2025-04-28 12:28:45,527 | INFO     | executing command: cat /etc/os-release
[2025-04-28 05:28:56] 2025-04-28 12:28:45,562 | INFO     | cat /etc/os-release:
[2025-04-28 05:28:56] NAME="CentOS Linux"
[2025-04-28 05:28:56] VERSION="7 (Core)"
[2025-04-28 05:28:56] ID="centos"
[2025-04-28 05:28:56] ID_LIKE="rhel fedora"
[2025-04-28 05:28:56] VERSION_ID="7"
[2025-04-28 05:28:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 05:28:56] ANSI_COLOR="0;31"
[2025-04-28 05:28:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 05:28:56] HOME_URL="https://www.centos.org/"
[2025-04-28 05:28:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 05:28:56] 
[2025-04-28 05:28:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 05:28:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 05:28:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 05:28:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 05:28:56] 
[2025-04-28 05:28:56] 2025-04-28 12:28:45,563 | INFO     | **************************************
[2025-04-28 05:28:56] 2025-04-28 12:28:46,066 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-28 05:28:56] 2025-04-28 12:28:46,087 | INFO     | sufficient remaining disk space (2026673012736 B)
[2025-04-28 05:28:56] 2025-04-28 12:28:46,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 05:28:56] 2025-04-28 12:28:46,088 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 05:28:56] 2025-04-28 12:28:46,088 | INFO     | update_server=False
[2025-04-28 05:28:56] 2025-04-28 12:28:46,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 05:28:56] 2025-04-28 12:28:46,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 05:28:56] 2025-04-28 12:28:46,229 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 05:28:56] 2025-04-28 12:28:46,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 05:28:56] 2025-04-28 12:28:46,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 05:28:56] 2025-04-28 12:28:46,437 | INFO     | all data control threads have been joined
[2025-04-28 05:28:56] 2025-04-28 12:28:46,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 05:28:56] 2025-04-28 12:28:46,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 05:28:56] 2025-04-28 12:28:46,916 | INFO     | aborting loop
[2025-04-28 05:28:56] 2025-04-28 12:28:47,094 | INFO     | [job] retrieve thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:47,425 | INFO     | all payload control threads have been joined
[2025-04-28 05:28:56] 2025-04-28 12:28:47,443 | INFO     | [data] control thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:47,482 | INFO     | [payload] failed_post thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:47,608 | INFO     | [payload] validate_post thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:47,767 | INFO     | [data] copytool_in thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:47,776 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:47,780 | INFO     | all job control threads have been joined
[2025-04-28 05:28:56] 2025-04-28 12:28:47,922 | INFO     | [job] job monitor thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:48,186 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:48,247 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:48,360 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:48,431 | INFO     | [payload] control thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:48,530 | INFO     | [job] validate thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:48,752 | INFO     | [data] copytool_out thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:48,786 | INFO     | [job] control thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:48,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 05:28:56] 2025-04-28 12:28:49,912 | INFO     | [job] queue monitor thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:50,097 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 05:28:56] 2025-04-28 12:28:50,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251720722240)>', '<ExcThread(monitor, started 140251167168256)>']
[2025-04-28 05:28:56] 2025-04-28 12:28:51,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 05:28:56] 2025-04-28 12:28:51,261 | INFO     | [monitor] control thread has ended
[2025-04-28 05:28:56] 2025-04-28 12:28:55,356 | INFO     | all workflow threads have been joined
[2025-04-28 05:28:56] 2025-04-28 12:28:55,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 05:28:56] 2025-04-28 12:28:55,357 | INFO     | traces error code: 0
[2025-04-28 05:28:56] 2025-04-28 12:28:55,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 05:28:56] 2025-04-28 12:28:55,622 [wrapper] ==== pilot stdout END ====
[2025-04-28 05:28:56] 2025-04-28 12:28:55,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 05:28:56] 2025-04-28 12:28:55,659 [wrapper] pilotpid: 3874129
[2025-04-28 05:28:56] 2025-04-28 12:28:55,675 [wrapper] Pilot exit status: 0
[2025-04-28 05:28:56] 2025-04-28 12:28:55,771 [wrapper] pandaids: 6617827080
[2025-04-28 05:28:56] 2025-04-28 12:28:55,851 [wrapper] cleanup supervisor_pilot 4178737 3874130
[2025-04-28 05:28:56] 2025-04-28 12:28:55,854 [wrapper] Test setup, not cleaning
[2025-04-28 05:28:56] 2025-04-28 12:28:55,856 [wrapper] apfmon messages muted
[2025-04-28 05:28:56] 2025-04-28 12:28:55,858 [wrapper] ==== wrapper stdout END ====
[2025-04-28 05:28:56] 2025-04-28 12:28:55,860 [wrapper] ==== wrapper stderr END ====
[2025-04-28 05:28:56]  *** Error codes and diagnostics ***
[2025-04-28 05:28:56]     "exeErrorCode": 0,
[2025-04-28 05:28:56]     "exeErrorDiag": "",
[2025-04-28 05:28:56]     "pilotErrorCode": 0,
[2025-04-28 05:28:56]     "pilotErrorDiag": "",
[2025-04-28 05:28:56]  *** Listing of results directory ***
[2025-04-28 05:28:56] total 416804
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc    495897 Apr 27 16:00 pilot3.tar.gz
[2025-04-28 05:28:56] -rwx------. 1 boinc boinc     37140 Apr 27 16:26 runpilot2-wrapper.sh
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc      5111 Apr 27 16:26 queuedata.json
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc       100 Apr 28 02:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 05:28:56] -rwxr-xr-x. 1 boinc boinc      7986 Apr 28 02:44 run_atlas
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc       105 Apr 28 02:44 job.xml
[2025-04-28 05:28:56] -rw-r--r--. 2 boinc boinc 224226556 Apr 28 02:44 EVNT.44292255._003006.pool.root.1
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc      6597 Apr 28 02:44 init_data.xml
[2025-04-28 05:28:56] drwxrwx--x. 2 boinc boinc      4096 Apr 28 02:44 shared
[2025-04-28 05:28:56] -rw-r--r--. 2 boinc boinc    508882 Apr 28 02:44 input.tar.gz
[2025-04-28 05:28:56] -rw-r--r--. 2 boinc boinc     17569 Apr 28 02:44 start_atlas.sh
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc         0 Apr 28 02:44 boinc_lockfile
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc      2551 Apr 28 02:44 pandaJob.out
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc       424 Apr 28 02:44 setup.sh.local
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc    992198 Apr 28 02:44 agis_schedconf.cvmfs.json
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc   1596659 Apr 28 02:44 agis_ddmendpoints.agis.ALL.json
[2025-04-28 05:28:56] drwx------. 4 boinc boinc      4096 Apr 28 02:44 pilot3
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc 196152578 Apr 28 05:27 HITS.44292257._025447.pool.root.1
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc       529 Apr 28 05:28 boinc_task_state.xml
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc      1038 Apr 28 05:28 memory_monitor_summary.json
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc    425025 Apr 28 05:28 log.44292257._025447.job.log.tgz.1
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc      8192 Apr 28 05:28 boinc_mmap_file
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc        27 Apr 28 05:28 wrapper_checkpoint.txt
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc        95 Apr 28 05:28 pilot_heartbeat.json
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc      7719 Apr 28 05:28 heartbeat.json
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc      4352 Apr 28 05:28 pilotlog.txt
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc    870173 Apr 28 05:28 log.44292257._025447.job.log.1
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc       357 Apr 28 05:28 output.list
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc       620 Apr 28 05:28 runtime_log
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc   1310720 Apr 28 05:28 result.tar.gz
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc     11144 Apr 28 05:28 runtime_log.err
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc       659 Apr 28 05:28 4nONDmrZQT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmUCCLDm14Inkm.diag
[2025-04-28 05:28:56] -rw-r--r--. 1 boinc boinc     20698 Apr 28 05:28 stderr.txt
[2025-04-28 05:28:56] HITS file was successfully produced:
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc 196152578 Apr 28 05:27 shared/HITS.pool.root.1
[2025-04-28 05:28:56]  *** Contents of shared directory: ***
[2025-04-28 05:28:56] total 412336
[2025-04-28 05:28:56] -rw-r--r--. 2 boinc boinc 224226556 Apr 28 02:44 ATLAS.root_0
[2025-04-28 05:28:56] -rw-r--r--. 2 boinc boinc    508882 Apr 28 02:44 input.tar.gz
[2025-04-28 05:28:56] -rw-r--r--. 2 boinc boinc     17569 Apr 28 02:44 start_atlas.sh
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc 196152578 Apr 28 05:27 HITS.pool.root.1
[2025-04-28 05:28:56] -rw-------. 1 boinc boinc   1310720 Apr 28 05:28 result.tar.gz
05:28:58 (3870528): run_atlas exited; CPU time 36270.656984
05:28:58 (3870528): called boinc_finish(0)

</stderr_txt>
]]>

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