Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:15:47 (4093543): wrapper (7.7.26015): starting
14:15:47 (4093543): wrapper: running run_atlas (--nthreads 4)
[2025-04-28 14:15:47] Arguments: --nthreads 4
[2025-04-28 14:15:47] Threads: 4
[2025-04-28 14:15:47] Checking for CVMFS
[2025-04-28 14:15:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 14:15:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 14:15:57] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 14:15:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 14:15:58] 2.12.7.0 4026286 147 46396 145361 1 3 3776250 4096001 821 130560 0 169375 99.902 211257 737 http://s1ihep-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-04-28 14:15:58] CVMFS is ok
[2025-04-28 14:15:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 14:15:58] Checking for apptainer binary...
[2025-04-28 14:15:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 14:15:58] Running /usr/bin/apptainer --version
[2025-04-28 14:15:58] apptainer version 1.4.0
[2025-04-28 14:15:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 14:15:58] Zen
[2025-04-28 14:15:58] apptainer works
[2025-04-28 14:15:58] Set ATHENA_PROC_NUMBER=4
[2025-04-28 14:15:58] Set ATHENA_CORE_NUMBER=4
[2025-04-28 14:15:58] Starting ATLAS job with PandaID=6608805911
[2025-04-28 14:15:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 16:10:13]  *** The last 200 lines of the pilot log: ***
[2025-04-28 16:10:13] 2025-04-28 06:10:01,154 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-28 16:10:13] 2025-04-28 06:10:01,154 | INFO     | using path: /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6608805911/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 16:10:13] 2025-04-28 06:10:01,154 | INFO     | extracted standard info from prmon json
[2025-04-28 16:10:13] 2025-04-28 06:10:01,154 | INFO     | extracted standard memory fields from prmon json
[2025-04-28 16:10:13] 2025-04-28 06:10:01,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-28 16:10:13] 2025-04-28 06:10:01,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-28 16:10:13] 2025-04-28 06:10:01,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-28 16:10:13] 2025-04-28 06:10:01,157 | INFO     | fitting pss+swap vs Time
[2025-04-28 16:10:13] 2025-04-28 06:10:01,157 | INFO     | sum of square deviations: 424045160.0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | sum of deviations: 502711979.99999976
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | mean x: 1745817169.0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | mean y: 2479185.792792793
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | -- intersect: -2067213593.499828
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | intersect: -2067213593.499828
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | chi2: 3.168098514675769
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | sum of square deviations: 369281342.5
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | sum of deviations: 2398816002.499997
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | mean x: 1745817016.5
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | mean y: 2484469.4433962265
[2025-04-28 16:10:13] 2025-04-28 06:10:01,158 | INFO     | -- intersect: -11338174574.594286
[2025-04-28 16:10:13] 2025-04-28 06:10:01,159 | INFO     | intersect: -11338174574.594286
[2025-04-28 16:10:13] 2025-04-28 06:10:01,159 | INFO     | chi2: 3.173684694174661
[2025-04-28 16:10:13] 2025-04-28 06:10:01,159 | INFO     | current chi2=3.173684694174661 (change=-0.1763259404028837 %)
[2025-04-28 16:10:13] 2025-04-28 06:10:01,159 | INFO     | right removable region: 105
[2025-04-28 16:10:13] 2025-04-28 06:10:01,159 | INFO     | sum of square deviations: 369281342.5
[2025-04-28 16:10:13] 2025-04-28 06:10:01,159 | INFO     | sum of deviations: -24368672260.500004
[2025-04-28 16:10:13] 2025-04-28 06:10:01,159 | INFO     | mean x: 1745817321.5
[2025-04-28 16:10:13] 2025-04-28 06:10:01,159 | INFO     | mean y: 2548001.4811320757
[2025-04-28 16:10:13] 2025-04-28 06:10:01,159 | INFO     | -- intersect: 115208070832.18701
[2025-04-28 16:10:13] 2025-04-28 06:10:01,159 | INFO     | intersect: 115208070832.18701
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | chi2: 0.73778172778077
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | current chi2=0.73778172778077 (change=76.71215953787105 %)
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | sum of square deviations: 319447850.0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | sum of deviations: -31809891978.999996
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | mean x: 1745817474.0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | mean y: 2570099.4554455443
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | -- intersect: 173847112371.34937
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | intersect: 173847112371.34937
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | chi2: 0.1838449645331534
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | current chi2=0.1838449645331534 (change=75.08138821950028 %)
[2025-04-28 16:10:13] 2025-04-28 06:10:01,160 | INFO     | sum of square deviations: 274312120.0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | sum of deviations: -29110919559.499992
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | mean x: 1745817626.5
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | mean y: 2560958.4270833335
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | -- intersect: 185274566040.07898
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | intersect: 185274566040.07898
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | chi2: 0.17330787460791464
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | current chi2=0.17330787460791464 (change=5.731508584962404 %)
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | left removable region: 30
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | sum of square deviations: 130793150.0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | sum of deviations: -17316648829.0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | mean x: 1745817901.0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,161 | INFO     | mean y: 2532998.2666666666
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | -- intersect: 231143961360.52332
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | intersect: 231143961360.52332
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | chi2: 0.1460758118589122
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | -- intersect: 231143961360.52332
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | current memory leak: -132.40 B/s (using 75 data points, chi2=0.15)
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | ..............................
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | . Timing measurements:
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | . get job = 0 s
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | . initial setup = 6 s
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | . payload setup = 10 s
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | . stage-in = 0 s
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | . payload execution = 6764 s
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | . stage-out = 0 s
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | . log creation = 0 s
[2025-04-28 16:10:13] 2025-04-28 06:10:01,162 | INFO     | ..............................
[2025-04-28 16:10:13] 2025-04-28 06:10:01,331 | INFO     | 
[2025-04-28 16:10:13] 2025-04-28 06:10:01,331 | INFO     | job summary report
[2025-04-28 16:10:13] 2025-04-28 06:10:01,331 | INFO     | --------------------------------------------------
[2025-04-28 16:10:13] 2025-04-28 06:10:01,331 | INFO     | PanDA job id: 6608805911
[2025-04-28 16:10:13] 2025-04-28 06:10:01,331 | INFO     | task id: 44075483
[2025-04-28 16:10:13] 2025-04-28 06:10:01,331 | INFO     | errors: (none)
[2025-04-28 16:10:13] 2025-04-28 06:10:01,331 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | pilot state: finished 
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | transexitcode: 0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | exeerrorcode: 0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | exeerrordiag: 
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | exitcode: 0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | exitmsg: OK
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | cpuconsumptiontime: 24994 s
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | nevents: 400
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | neventsw: 0
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | pid: 4104678
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | pgrp: 4104678
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | corecount: 4
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | event service: False
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | sizes: {0: 2392937, 1: 2393804, 8: 2394010, 12: 2394038, 6776: 2421187, 6778: 2430334, 6805: 2430448}
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | --------------------------------------------------
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | 
[2025-04-28 16:10:13] 2025-04-28 06:10:01,332 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/1
[2025-04-28 16:10:13] 2025-04-28 06:10:01,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,412 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 16:10:13] 2025-04-28 06:10:01,413 | INFO     | job 6608805911 has completed (purged errors)
[2025-04-28 16:10:13] 2025-04-28 06:10:01,413 | INFO     | overall cleanup function is called
[2025-04-28 16:10:13] 2025-04-28 06:10:02,419 | INFO     | --- collectZombieJob: --- 10, [4104678]
[2025-04-28 16:10:13] 2025-04-28 06:10:02,419 | INFO     | zombie collector waiting for pid 4104678
[2025-04-28 16:10:13] 2025-04-28 06:10:02,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 16:10:13] 2025-04-28 06:10:02,419 | INFO     | collected zombie processes
[2025-04-28 16:10:13] 2025-04-28 06:10:02,419 | INFO     | will attempt to kill all subprocesses of pid=4104678
[2025-04-28 16:10:13] 2025-04-28 06:10:02,541 | INFO     | process IDs to be killed: [4104678] (in reverse order)
[2025-04-28 16:10:13] 2025-04-28 06:10:02,709 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 16:10:13] 2025-04-28 06:10:02,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 16:10:13] 2025-04-28 06:10:02,712 | INFO     | did not find any defunct processes belonging to 4104678
[2025-04-28 16:10:13] 2025-04-28 06:10:02,714 | INFO     | did not find any defunct processes belonging to 4104678
[2025-04-28 16:10:13] 2025-04-28 06:10:02,714 | INFO     | ready for new job
[2025-04-28 16:10:13] 2025-04-28 06:10:02,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 16:10:13] 2025-04-28 06:10:02,715 | INFO     | **************************************
[2025-04-28 16:10:13] 2025-04-28 06:10:02,715 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 16:10:13] 2025-04-28 06:10:02,715 | INFO     | **************************************
[2025-04-28 16:10:13] 2025-04-28 06:10:02,715 | INFO     | 
[2025-04-28 16:10:13] 2025-04-28 06:10:02,716 | INFO     | architecture information:
[2025-04-28 16:10:13] 2025-04-28 06:10:02,721 | INFO     | executing command: cat /etc/os-release
[2025-04-28 16:10:13] 2025-04-28 06:10:02,760 | INFO     | cat /etc/os-release:
[2025-04-28 16:10:13] NAME="CentOS Linux"
[2025-04-28 16:10:13] VERSION="7 (Core)"
[2025-04-28 16:10:13] ID="centos"
[2025-04-28 16:10:13] ID_LIKE="rhel fedora"
[2025-04-28 16:10:13] VERSION_ID="7"
[2025-04-28 16:10:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 16:10:13] ANSI_COLOR="0;31"
[2025-04-28 16:10:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 16:10:13] HOME_URL="https://www.centos.org/"
[2025-04-28 16:10:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 16:10:13] 
[2025-04-28 16:10:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 16:10:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 16:10:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 16:10:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 16:10:13] 
[2025-04-28 16:10:13] 2025-04-28 06:10:02,760 | INFO     | **************************************
[2025-04-28 16:10:13] 2025-04-28 06:10:03,262 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/1
[2025-04-28 16:10:13] 2025-04-28 06:10:03,283 | INFO     | sufficient remaining disk space (360267644928 B)
[2025-04-28 16:10:13] 2025-04-28 06:10:03,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 16:10:13] 2025-04-28 06:10:03,284 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 16:10:13] 2025-04-28 06:10:03,284 | INFO     | update_server=False
[2025-04-28 16:10:13] 2025-04-28 06:10:03,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 16:10:13] 2025-04-28 06:10:03,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 16:10:13] 2025-04-28 06:10:03,532 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 16:10:13] 2025-04-28 06:10:03,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 16:10:13] 2025-04-28 06:10:03,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 16:10:13] 2025-04-28 06:10:03,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 16:10:13] 2025-04-28 06:10:03,855 | INFO     | aborting loop
[2025-04-28 16:10:13] 2025-04-28 06:10:03,948 | INFO     | all data control threads have been joined
[2025-04-28 16:10:13] 2025-04-28 06:10:04,288 | INFO     | [job] retrieve thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:04,459 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:04,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 16:10:13] 2025-04-28 06:10:04,695 | INFO     | all job control threads have been joined
[2025-04-28 16:10:13] 2025-04-28 06:10:04,696 | INFO     | [payload] failed_post thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:04,763 | INFO     | all payload control threads have been joined
[2025-04-28 16:10:13] 2025-04-28 06:10:04,860 | INFO     | [job] job monitor thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:04,953 | INFO     | [data] control thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:05,215 | INFO     | [payload] validate_post thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:05,238 | INFO     | [data] copytool_in thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:05,414 | INFO     | [job] validate thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:05,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:05,640 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:05,700 | INFO     | [job] control thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:05,750 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:05,768 | INFO     | [payload] control thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:06,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 16:10:13] 2025-04-28 06:10:06,499 | INFO     | [data] copytool_out thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:07,234 | INFO     | [job] queue monitor thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:07,289 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 16:10:13] 2025-04-28 06:10:07,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130196283586368)>', '<ExcThread(monitor, started 130195918923520)>']
[2025-04-28 16:10:13] 2025-04-28 06:10:08,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 16:10:13] 2025-04-28 06:10:08,560 | INFO     | [monitor] control thread has ended
[2025-04-28 16:10:13] 2025-04-28 06:10:12,943 | INFO     | all workflow threads have been joined
[2025-04-28 16:10:13] 2025-04-28 06:10:12,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 16:10:13] 2025-04-28 06:10:12,944 | INFO     | traces error code: 0
[2025-04-28 16:10:13] 2025-04-28 06:10:12,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 16:10:13] 2025-04-28 06:10:13,033 [wrapper] ==== pilot stdout END ====
[2025-04-28 16:10:13] 2025-04-28 06:10:13,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 16:10:13] 2025-04-28 06:10:13,039 [wrapper] pilotpid: 4097713
[2025-04-28 16:10:13] 2025-04-28 06:10:13,044 [wrapper] Pilot exit status: 0
[2025-04-28 16:10:13] 2025-04-28 06:10:13,065 [wrapper] pandaids: 6608805911
[2025-04-28 16:10:13] 2025-04-28 06:10:13,164 [wrapper] cleanup supervisor_pilot 4122375 4097714
[2025-04-28 16:10:13] 2025-04-28 06:10:13,166 [wrapper] Test setup, not cleaning
[2025-04-28 16:10:13] 2025-04-28 06:10:13,180 [wrapper] apfmon messages muted
[2025-04-28 16:10:13] 2025-04-28 06:10:13,182 [wrapper] ==== wrapper stdout END ====
[2025-04-28 16:10:13] 2025-04-28 06:10:13,183 [wrapper] ==== wrapper stderr END ====
[2025-04-28 16:10:13]  *** Error codes and diagnostics ***
[2025-04-28 16:10:13]     "exeErrorCode": 0,
[2025-04-28 16:10:13]     "exeErrorDiag": "",
[2025-04-28 16:10:13]     "pilotErrorCode": 0,
[2025-04-28 16:10:13]     "pilotErrorDiag": "",
[2025-04-28 16:10:13]  *** Listing of results directory ***
[2025-04-28 16:10:13] total 417212
[2025-04-28 16:10:13] -rw-r--r-- 1 michael michael    495897 Apr 20 17:23 pilot3.tar.gz
[2025-04-28 16:10:13] -rw-r--r-- 1 michael michael      5111 Apr 20 17:38 queuedata.json
[2025-04-28 16:10:13] -rwx------ 1 michael michael     37140 Apr 20 17:39 runpilot2-wrapper.sh
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael       100 Apr 28 14:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 16:10:13] -rwxr-xr-x 1 michael michael      7986 Apr 28 14:15 run_atlas
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael       105 Apr 28 14:15 job.xml
[2025-04-28 16:10:13] -rw-r--r-- 2 michael michael 224725487 Apr 28 14:15 EVNT.44075481._003682.pool.root.1
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael      9857 Apr 28 14:15 init_data.xml
[2025-04-28 16:10:13] -rw-r--r-- 2 michael michael     17569 Apr 28 14:15 start_atlas.sh
[2025-04-28 16:10:13] drwxrwx--x 2 michael michael      4096 Apr 28 14:15 shared
[2025-04-28 16:10:13] -rw-r--r-- 2 michael michael    508897 Apr 28 14:15 input.tar.gz
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael         0 Apr 28 14:15 boinc_lockfile
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael      2578 Apr 28 14:15 pandaJob.out
[2025-04-28 16:10:13] -rw------- 1 michael michael       460 Apr 28 14:15 setup.sh.local
[2025-04-28 16:10:13] -rw------- 1 michael michael    992879 Apr 28 14:16 agis_schedconf.cvmfs.json
[2025-04-28 16:10:13] -rw------- 1 michael michael   1596659 Apr 28 14:16 agis_ddmendpoints.agis.ALL.json
[2025-04-28 16:10:13] drwx------ 4 michael michael      4096 Apr 28 14:16 pilot3
[2025-04-28 16:10:13] -rw------- 1 michael michael 196830130 Apr 28 16:09 HITS.44075483._094579.pool.root.1
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael       529 Apr 28 16:09 boinc_task_state.xml
[2025-04-28 16:10:13] -rw------- 1 michael michael        95 Apr 28 16:09 pilot_heartbeat.json
[2025-04-28 16:10:13] -rw------- 1 michael michael      1027 Apr 28 16:09 memory_monitor_summary.json
[2025-04-28 16:10:13] -rw------- 1 michael michael    261783 Apr 28 16:09 log.44075483._094579.job.log.tgz.1
[2025-04-28 16:10:13] -rw------- 1 michael michael      7652 Apr 28 16:10 heartbeat.json
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael      8192 Apr 28 16:10 boinc_mmap_file
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael        27 Apr 28 16:10 wrapper_checkpoint.txt
[2025-04-28 16:10:13] -rw------- 1 michael michael      4365 Apr 28 16:10 pilotlog.txt
[2025-04-28 16:10:13] -rw------- 1 michael michael    651084 Apr 28 16:10 log.44075483._094579.job.log.1
[2025-04-28 16:10:13] -rw------- 1 michael michael       357 Apr 28 16:10 output.list
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael       620 Apr 28 16:10 runtime_log
[2025-04-28 16:10:13] -rw------- 1 michael michael    931840 Apr 28 16:10 result.tar.gz
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael     11514 Apr 28 16:10 runtime_log.err
[2025-04-28 16:10:13] -rw------- 1 michael michael       641 Apr 28 16:10 h1sMDmwReQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmMW7KDmLV5vjn.diag
[2025-04-28 16:10:13] -rw-rw-r-- 1 michael michael     20515 Apr 28 16:10 stderr.txt
[2025-04-28 16:10:13] HITS file was successfully produced:
[2025-04-28 16:10:13] -rw------- 1 michael michael 196830130 Apr 28 16:09 shared/HITS.pool.root.1
[2025-04-28 16:10:13]  *** Contents of shared directory: ***
[2025-04-28 16:10:13] total 413116
[2025-04-28 16:10:13] -rw-r--r-- 2 michael michael 224725487 Apr 28 14:15 ATLAS.root_0
[2025-04-28 16:10:13] -rw-r--r-- 2 michael michael     17569 Apr 28 14:15 start_atlas.sh
[2025-04-28 16:10:13] -rw-r--r-- 2 michael michael    508897 Apr 28 14:15 input.tar.gz
[2025-04-28 16:10:13] -rw------- 1 michael michael 196830130 Apr 28 16:09 HITS.pool.root.1
[2025-04-28 16:10:13] -rw------- 1 michael michael    931840 Apr 28 16:10 result.tar.gz
16:10:14 (4093543): run_atlas exited; CPU time 25037.355637
16:10:14 (4093543): called boinc_finish(0)

</stderr_txt>
]]>

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