Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:52:24 (3480019): wrapper (7.7.26015): starting
19:52:24 (3480019): wrapper: running run_atlas (--nthreads 12)
[2025-04-27 19:52:24] Arguments: --nthreads 12
[2025-04-27 19:52:24] Threads: 12
[2025-04-27 19:52:24] Checking for CVMFS
[2025-04-27 19:52:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-27 19:52:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-27 19:52:24] Running cvmfs_config stat atlas.cern.ch
[2025-04-27 19:52:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-27 19:52:25] 2.11.5.0 68805 4946 159056 145358 0 332 41778018 45568000 7873 130560 0 37642326 99.786 32583475 28859 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-27 19:52:25] CVMFS is ok
[2025-04-27 19:52:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-27 19:52:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-27 19:52:25] Further information can be found at the LHC@home message board.
[2025-04-27 19:52:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-27 19:52:25] Checking for apptainer binary...
[2025-04-27 19:52:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-27 19:52:25] Running /usr/bin/apptainer --version
[2025-04-27 19:52:25] apptainer version 1.3.5-1.el9
[2025-04-27 19:52:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-27 19:52:25] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0134.triumf.lcg
[2025-04-27 19:52:25] apptainer works
[2025-04-27 19:52:25] Set ATHENA_PROC_NUMBER=12
[2025-04-27 19:52:25] Set ATHENA_CORE_NUMBER=12
[2025-04-27 19:52:25] Starting ATLAS job with PandaID=6617691999
[2025-04-27 19:52:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-27 22:11:03]  *** The last 200 lines of the pilot log: ***
[2025-04-27 22:11:03] 2025-04-28 05:10:48,528 | INFO     | sum of square deviations: 780008746.1176479
[2025-04-27 22:11:03] 2025-04-28 05:10:48,528 | INFO     | sum of deviations: 55030285140.29413
[2025-04-27 22:11:03] 2025-04-28 05:10:48,528 | INFO     | mean x: 1745812902.8823528
[2025-04-27 22:11:03] 2025-04-28 05:10:48,528 | INFO     | mean y: 2597450.080882353
[2025-04-27 22:11:03] 2025-04-28 05:10:48,529 | INFO     | -- intersect: -123165998191.19154
[2025-04-27 22:11:03] 2025-04-28 05:10:48,529 | INFO     | intersect: -123165998191.19154
[2025-04-27 22:11:03] 2025-04-28 05:10:48,529 | INFO     | chi2: 4.833796840222092
[2025-04-27 22:11:03] 2025-04-28 05:10:48,529 | INFO     | sum of square deviations: 697104498.9160283
[2025-04-27 22:11:03] 2025-04-28 05:10:48,554 | INFO     | sum of deviations: 61991387167.81681
[2025-04-27 22:11:03] 2025-04-28 05:10:48,554 | INFO     | mean x: 1745812750.3816793
[2025-04-27 22:11:03] 2025-04-28 05:10:48,554 | INFO     | mean y: 2609745.9236641224
[2025-04-27 22:11:03] 2025-04-28 05:10:48,554 | INFO     | -- intersect: -155247219081.32996
[2025-04-27 22:11:03] 2025-04-28 05:10:48,554 | INFO     | intersect: -155247219081.32996
[2025-04-27 22:11:03] 2025-04-28 05:10:48,554 | INFO     | chi2: 4.141535777093909
[2025-04-27 22:11:03] 2025-04-28 05:10:48,554 | INFO     | current chi2=4.141535777093909 (change=14.32126930465651 %)
[2025-04-27 22:11:03] 2025-04-28 05:10:48,554 | INFO     | right removable region: 130
[2025-04-27 22:11:03] 2025-04-28 05:10:48,555 | INFO     | sum of square deviations: 697089005.3587797
[2025-04-27 22:11:03] 2025-04-28 05:10:48,555 | INFO     | sum of deviations: 21023426173.946587
[2025-04-27 22:11:03] 2025-04-28 05:10:48,555 | INFO     | mean x: 1745813055.3969467
[2025-04-27 22:11:03] 2025-04-28 05:10:48,555 | INFO     | mean y: 2659714.3664122135
[2025-04-27 22:11:03] 2025-04-28 05:10:48,555 | INFO     | -- intersect: -52649113016.949936
[2025-04-27 22:11:03] 2025-04-28 05:10:48,555 | INFO     | intersect: -52649113016.949936
[2025-04-27 22:11:03] 2025-04-28 05:10:48,555 | INFO     | chi2: 2.48893891359013
[2025-04-27 22:11:03] 2025-04-28 05:10:48,555 | INFO     | current chi2=2.48893891359013 (change=48.509649953021736 %)
[2025-04-27 22:11:03] 2025-04-28 05:10:48,556 | INFO     | sum of square deviations: 620262402.0396805
[2025-04-27 22:11:03] 2025-04-28 05:10:48,556 | INFO     | sum of deviations: -3385621044.2698393
[2025-04-27 22:11:03] 2025-04-28 05:10:48,556 | INFO     | mean x: 1745813207.9126985
[2025-04-27 22:11:03] 2025-04-28 05:10:48,556 | INFO     | mean y: 2708184.793650794
[2025-04-27 22:11:03] 2025-04-28 05:10:48,556 | INFO     | -- intersect: 9532000814.230413
[2025-04-27 22:11:03] 2025-04-28 05:10:48,556 | INFO     | intersect: 9532000814.230413
[2025-04-27 22:11:03] 2025-04-28 05:10:48,557 | INFO     | chi2: 1.3582660626436862
[2025-04-27 22:11:03] 2025-04-28 05:10:48,557 | INFO     | current chi2=1.3582660626436862 (change=45.427906839044226 %)
[2025-04-27 22:11:03] 2025-04-28 05:10:48,557 | INFO     | sum of square deviations: 549296373.6528939
[2025-04-27 22:11:03] 2025-04-28 05:10:48,562 | INFO     | sum of deviations: -17004353592.752066
[2025-04-27 22:11:03] 2025-04-28 05:10:48,563 | INFO     | mean x: 1745813360.429752
[2025-04-27 22:11:03] 2025-04-28 05:10:48,563 | INFO     | mean y: 2737050.26446281
[2025-04-27 22:11:03] 2025-04-28 05:10:48,563 | INFO     | -- intersect: 54047200315.65892
[2025-04-27 22:11:03] 2025-04-28 05:10:48,563 | INFO     | intersect: 54047200315.65892
[2025-04-27 22:11:03] 2025-04-28 05:10:48,563 | INFO     | chi2: 0.8260848715029189
[2025-04-27 22:11:03] 2025-04-28 05:10:48,563 | INFO     | current chi2=0.8260848715029189 (change=39.180923809945355 %)
[2025-04-27 22:11:03] 2025-04-28 05:10:48,563 | INFO     | sum of square deviations: 483972753.44827604
[2025-04-27 22:11:03] 2025-04-28 05:10:48,564 | INFO     | sum of deviations: -12653438587.620687
[2025-04-27 22:11:03] 2025-04-28 05:10:48,564 | INFO     | mean x: 1745813512.9310346
[2025-04-27 22:11:03] 2025-04-28 05:10:48,564 | INFO     | mean y: 2726737.672413793
[2025-04-27 22:11:03] 2025-04-28 05:10:48,564 | INFO     | -- intersect: 45646916237.84038
[2025-04-27 22:11:03] 2025-04-28 05:10:48,564 | INFO     | intersect: 45646916237.84038
[2025-04-27 22:11:03] 2025-04-28 05:10:48,564 | INFO     | chi2: 0.7864581253036916
[2025-04-27 22:11:03] 2025-04-28 05:10:48,564 | INFO     | current chi2=0.7864581253036916 (change=4.796934015645778 %)
[2025-04-27 22:11:03] 2025-04-28 05:10:48,564 | INFO     | left removable region: 40
[2025-04-27 22:11:03] 2025-04-28 05:10:48,564 | INFO     | sum of square deviations: 226011768.89999995
[2025-04-27 22:11:03] 2025-04-28 05:10:48,565 | INFO     | sum of deviations: -231720457.69999993
[2025-04-27 22:11:03] 2025-04-28 05:10:48,565 | INFO     | mean x: 1745813939.9666667
[2025-04-27 22:11:03] 2025-04-28 05:10:48,565 | INFO     | mean y: 2735924.433333333
[2025-04-27 22:11:03] 2025-04-28 05:10:48,565 | INFO     | -- intersect: 1792646278.2039254
[2025-04-27 22:11:03] 2025-04-28 05:10:48,565 | INFO     | intersect: 1792646278.2039254
[2025-04-27 22:11:03] 2025-04-28 05:10:48,565 | INFO     | chi2: 0.00023039922530342864
[2025-04-27 22:11:03] 2025-04-28 05:10:48,565 | INFO     | -- intersect: 1792646278.2039254
[2025-04-27 22:11:03] 2025-04-28 05:10:48,565 | INFO     | current memory leak: -1.03 B/s (using 90 data points, chi2=0.00)
[2025-04-27 22:11:03] 2025-04-28 05:10:48,566 | INFO     | ..............................
[2025-04-27 22:11:03] 2025-04-28 05:10:48,566 | INFO     | . Timing measurements:
[2025-04-27 22:11:03] 2025-04-28 05:10:48,566 | INFO     | . get job = 0 s
[2025-04-27 22:11:03] 2025-04-28 05:10:48,566 | INFO     | . initial setup = 3 s
[2025-04-27 22:11:03] 2025-04-28 05:10:48,566 | INFO     | . payload setup = 6 s
[2025-04-27 22:11:03] 2025-04-28 05:10:48,566 | INFO     | . stage-in = 0 s
[2025-04-27 22:11:03] 2025-04-28 05:10:48,566 | INFO     | . payload execution = 8245 s
[2025-04-27 22:11:03] 2025-04-28 05:10:48,566 | INFO     | . stage-out = 2 s
[2025-04-27 22:11:03] 2025-04-28 05:10:48,566 | INFO     | . log creation = 0 s
[2025-04-27 22:11:03] 2025-04-28 05:10:48,579 | INFO     | ..............................
[2025-04-27 22:11:03] 2025-04-28 05:10:48,883 | INFO     | 
[2025-04-27 22:11:03] 2025-04-28 05:10:48,883 | INFO     | job summary report
[2025-04-27 22:11:03] 2025-04-28 05:10:48,883 | INFO     | --------------------------------------------------
[2025-04-27 22:11:03] 2025-04-28 05:10:48,883 | INFO     | PanDA job id: 6617691999
[2025-04-27 22:11:03] 2025-04-28 05:10:48,883 | INFO     | task id: 44292257
[2025-04-27 22:11:03] 2025-04-28 05:10:48,883 | INFO     | errors: (none)
[2025-04-27 22:11:03] 2025-04-28 05:10:48,883 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-27 22:11:03] 2025-04-28 05:10:48,883 | INFO     | pilot state: finished 
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | transexitcode: 0
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | exeerrorcode: 0
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | exeerrordiag: 
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | exitcode: 0
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | exitmsg: OK
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | cpuconsumptiontime: 36107 s
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | nevents: 400
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | neventsw: 0
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | pid: 3490008
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | pgrp: 3490008
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | corecount: 12
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | event service: False
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | sizes: {0: 2393556, 1: 2393755, 6: 2393961, 11: 2393989, 8255: 2421756, 8256: 2421755, 8259: 2430930, 8274: 2431044}
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | --------------------------------------------------
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | 
[2025-04-27 22:11:03] 2025-04-28 05:10:48,884 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-27 22:11:03] 2025-04-28 05:10:48,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | job 6617691999 has completed (purged errors)
[2025-04-27 22:11:03] 2025-04-28 05:10:48,905 | INFO     | overall cleanup function is called
[2025-04-27 22:11:03] 2025-04-28 05:10:49,934 | INFO     | --- collectZombieJob: --- 10, [3490008]
[2025-04-27 22:11:03] 2025-04-28 05:10:49,934 | INFO     | zombie collector waiting for pid 3490008
[2025-04-27 22:11:03] 2025-04-28 05:10:49,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-27 22:11:03] 2025-04-28 05:10:49,935 | INFO     | collected zombie processes
[2025-04-27 22:11:03] 2025-04-28 05:10:49,935 | INFO     | will attempt to kill all subprocesses of pid=3490008
[2025-04-27 22:11:03] 2025-04-28 05:10:50,219 | INFO     | process IDs to be killed: [3490008] (in reverse order)
[2025-04-27 22:11:03] 2025-04-28 05:10:50,287 | WARNING  | found no corresponding commands to process id(s)
[2025-04-27 22:11:03] 2025-04-28 05:10:50,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-27 22:11:03] 2025-04-28 05:10:50,298 | INFO     | did not find any defunct processes belonging to 3490008
[2025-04-27 22:11:03] 2025-04-28 05:10:50,304 | INFO     | did not find any defunct processes belonging to 3490008
[2025-04-27 22:11:03] 2025-04-28 05:10:50,305 | INFO     | ready for new job
[2025-04-27 22:11:03] 2025-04-28 05:10:50,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-27 22:11:03] 2025-04-28 05:10:50,306 | INFO     | **************************************
[2025-04-27 22:11:03] 2025-04-28 05:10:50,306 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-27 22:11:03] 2025-04-28 05:10:50,307 | INFO     | **************************************
[2025-04-27 22:11:03] 2025-04-28 05:10:50,307 | INFO     | 
[2025-04-27 22:11:03] 2025-04-28 05:10:50,309 | INFO     | architecture information:
[2025-04-27 22:11:03] 2025-04-28 05:10:50,309 | INFO     | executing command: cat /etc/os-release
[2025-04-27 22:11:03] 2025-04-28 05:10:50,369 | INFO     | cat /etc/os-release:
[2025-04-27 22:11:03] NAME="CentOS Linux"
[2025-04-27 22:11:03] VERSION="7 (Core)"
[2025-04-27 22:11:03] ID="centos"
[2025-04-27 22:11:03] ID_LIKE="rhel fedora"
[2025-04-27 22:11:03] VERSION_ID="7"
[2025-04-27 22:11:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-27 22:11:03] ANSI_COLOR="0;31"
[2025-04-27 22:11:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-27 22:11:03] HOME_URL="https://www.centos.org/"
[2025-04-27 22:11:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-27 22:11:03] 
[2025-04-27 22:11:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-27 22:11:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-27 22:11:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-27 22:11:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-27 22:11:03] 
[2025-04-27 22:11:03] 2025-04-28 05:10:50,370 | INFO     | **************************************
[2025-04-27 22:11:03] 2025-04-28 05:10:50,876 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-27 22:11:03] 2025-04-28 05:10:50,995 | INFO     | sufficient remaining disk space (2018049523712 B)
[2025-04-27 22:11:03] 2025-04-28 05:10:50,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-27 22:11:03] 2025-04-28 05:10:50,995 | INFO     | current server update state: UPDATING_FINAL
[2025-04-27 22:11:03] 2025-04-28 05:10:50,995 | INFO     | update_server=False
[2025-04-27 22:11:03] 2025-04-28 05:10:50,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-27 22:11:03] 2025-04-28 05:10:50,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-27 22:11:03] 2025-04-28 05:10:50,996 | INFO     | aborting loop
[2025-04-27 22:11:03] 2025-04-28 05:10:51,135 | INFO     | found 0 job(s) in 20 queues
[2025-04-27 22:11:03] 2025-04-28 05:10:51,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-27 22:11:03] 2025-04-28 05:10:51,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-27 22:11:03] 2025-04-28 05:10:51,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-27 22:11:03] 2025-04-28 05:10:51,891 | INFO     | all data control threads have been joined
[2025-04-27 22:11:03] 2025-04-28 05:10:52,001 | INFO     | [job] retrieve thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:52,002 | INFO     | [job] job monitor thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:52,111 | INFO     | [payload] validate_pre thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:52,112 | INFO     | [data] copytool_in thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:52,282 | INFO     | all payload control threads have been joined
[2025-04-27 22:11:03] 2025-04-28 05:10:52,311 | INFO     | [payload] failed_post thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:52,330 | INFO     | [payload] execute_payloads thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:52,331 | INFO     | [job] create_data_payload thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:52,560 | INFO     | all job control threads have been joined
[2025-04-27 22:11:03] 2025-04-28 05:10:52,840 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:52,897 | INFO     | [data] control thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:53,035 | INFO     | [payload] validate_post thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:53,129 | INFO     | [job] validate thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:53,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-27 22:11:03] 2025-04-28 05:10:53,288 | INFO     | [payload] control thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:53,546 | INFO     | [data] copytool_out thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:53,566 | INFO     | [job] control thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:53,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-27 22:11:03] 2025-04-28 05:10:54,902 | INFO     | [job] queue monitor thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:57,142 | INFO     | [data] queue_monitor thread has finished
[2025-04-27 22:11:03] 2025-04-28 05:10:57,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673092790080)>', '<ExcThread(monitor, started 140672560510720)>']
[2025-04-27 22:11:03] 2025-04-28 05:10:58,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-27 22:11:03] 2025-04-28 05:10:58,177 | INFO     | [monitor] control thread has ended
[2025-04-27 22:11:03] 2025-04-28 05:11:02,270 | INFO     | all workflow threads have been joined
[2025-04-27 22:11:03] 2025-04-28 05:11:02,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-27 22:11:03] 2025-04-28 05:11:02,271 | INFO     | traces error code: 0
[2025-04-27 22:11:03] 2025-04-28 05:11:02,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-27 22:11:03] 2025-04-28 05:11:02,606 [wrapper] ==== pilot stdout END ====
[2025-04-27 22:11:03] 2025-04-28 05:11:02,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-27 22:11:03] 2025-04-28 05:11:02,655 [wrapper] pilotpid: 3483616
[2025-04-27 22:11:03] 2025-04-28 05:11:02,671 [wrapper] Pilot exit status: 0
[2025-04-27 22:11:03] 2025-04-28 05:11:02,720 [wrapper] pandaids: 6617691999
[2025-04-27 22:11:03] 2025-04-28 05:11:03,030 [wrapper] cleanup supervisor_pilot 4061615 3483617
[2025-04-27 22:11:03] 2025-04-28 05:11:03,057 [wrapper] Test setup, not cleaning
[2025-04-27 22:11:03] 2025-04-28 05:11:03,080 [wrapper] apfmon messages muted
[2025-04-27 22:11:03] 2025-04-28 05:11:03,096 [wrapper] ==== wrapper stdout END ====
[2025-04-27 22:11:03] 2025-04-28 05:11:03,127 [wrapper] ==== wrapper stderr END ====
[2025-04-27 22:11:03]  *** Error codes and diagnostics ***
[2025-04-27 22:11:03]     "exeErrorCode": 0,
[2025-04-27 22:11:03]     "exeErrorDiag": "",
[2025-04-27 22:11:03]     "pilotErrorCode": 0,
[2025-04-27 22:11:03]     "pilotErrorDiag": "",
[2025-04-27 22:11:03]  *** Listing of results directory ***
[2025-04-27 22:11:03] total 417632
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc    503527 Apr  3 00:42 pilot3.tar.gz
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc      5111 Apr 27 10:32 queuedata.json
[2025-04-27 22:11:03] -rwx------. 1 boinc boinc     37140 Apr 27 10:35 runpilot2-wrapper.sh
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc       100 Apr 27 19:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-27 22:11:03] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 19:52 run_atlas
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc       105 Apr 27 19:52 job.xml
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc      6598 Apr 27 19:52 init_data.xml
[2025-04-27 22:11:03] -rw-r--r--. 2 boinc boinc 224443273 Apr 27 19:52 EVNT.44292255._002885.pool.root.1
[2025-04-27 22:11:03] -rw-r--r--. 2 boinc boinc     17569 Apr 27 19:52 start_atlas.sh
[2025-04-27 22:11:03] drwxrwx--x. 2 boinc boinc      4096 Apr 27 19:52 shared
[2025-04-27 22:11:03] -rw-r--r--. 2 boinc boinc    517095 Apr 27 19:52 input.tar.gz
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc         0 Apr 27 19:52 boinc_lockfile
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc      2550 Apr 27 19:52 pandaJob.out
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc       424 Apr 27 19:52 setup.sh.local
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc    992863 Apr 27 19:52 agis_schedconf.cvmfs.json
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc   1596659 Apr 27 19:52 agis_ddmendpoints.agis.ALL.json
[2025-04-27 22:11:03] drwx------. 4 boinc boinc      4096 Apr 27 19:52 pilot3
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc 197074307 Apr 27 22:09 HITS.44292257._022383.pool.root.1
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc       529 Apr 27 22:09 boinc_task_state.xml
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc        95 Apr 27 22:10 pilot_heartbeat.json
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc      1043 Apr 27 22:10 memory_monitor_summary.json
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc    401089 Apr 27 22:10 log.44292257._022383.job.log.tgz.1
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc      7722 Apr 27 22:10 heartbeat.json
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc      8192 Apr 27 22:10 boinc_mmap_file
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc        27 Apr 27 22:10 wrapper_checkpoint.txt
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc      4352 Apr 27 22:11 pilotlog.txt
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc    741380 Apr 27 22:11 log.44292257._022383.job.log.1
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc       357 Apr 27 22:11 output.list
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc       620 Apr 27 22:11 runtime_log
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc   1157120 Apr 27 22:11 result.tar.gz
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc     11144 Apr 27 22:11 runtime_log.err
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc       660 Apr 27 22:11 Lj1LDmx5KT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXtsLDmSNSowm.diag
[2025-04-27 22:11:03] -rw-r--r--. 1 boinc boinc     20959 Apr 27 22:11 stderr.txt
[2025-04-27 22:11:03] HITS file was successfully produced:
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc 197074307 Apr 27 22:09 shared/HITS.pool.root.1
[2025-04-27 22:11:03]  *** Contents of shared directory: ***
[2025-04-27 22:11:03] total 413308
[2025-04-27 22:11:03] -rw-r--r--. 2 boinc boinc 224443273 Apr 27 19:52 ATLAS.root_0
[2025-04-27 22:11:03] -rw-r--r--. 2 boinc boinc     17569 Apr 27 19:52 start_atlas.sh
[2025-04-27 22:11:03] -rw-r--r--. 2 boinc boinc    517095 Apr 27 19:52 input.tar.gz
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc 197074307 Apr 27 22:09 HITS.pool.root.1
[2025-04-27 22:11:03] -rw-------. 1 boinc boinc   1157120 Apr 27 22:11 result.tar.gz
22:11:05 (3480019): run_atlas exited; CPU time 36209.289760
22:11:05 (3480019): called boinc_finish(0)

</stderr_txt>
]]>

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