Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:06:12 (2142826): wrapper (7.7.26015): starting
15:06:12 (2142826): wrapper: running run_atlas (--nthreads 2)
[2025-04-28 15:06:12] Arguments: --nthreads 2
[2025-04-28 15:06:12] Threads: 2
[2025-04-28 15:06:12] Checking for CVMFS
[2025-04-28 15:06:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 15:06:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 15:06:12] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 15:06:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 15:06:13] 2.12.7.0 1841542 3091 48020 145373 0 55 3635307 4096001 0 130560 0 723017 99.976 713122 2355 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-04-28 15:06:13] CVMFS is ok
[2025-04-28 15:06:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 15:06:13] Checking for apptainer binary...
[2025-04-28 15:06:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 15:06:13] Running /usr/bin/apptainer --version
[2025-04-28 15:06:13] apptainer version 1.3.4
[2025-04-28 15:06:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 15:06:13] ahanllin07
[2025-04-28 15:06:13] apptainer works
[2025-04-28 15:06:13] Set ATHENA_PROC_NUMBER=2
[2025-04-28 15:06:13] Set ATHENA_CORE_NUMBER=2
[2025-04-28 15:06:13] Starting ATLAS job with PandaID=6617691499
[2025-04-28 15:06:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-29 08:17:53]  *** The last 200 lines of the pilot log: ***
[2025-04-29 08:17:53] 2025-04-29 06:17:35,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 08:17:53] 2025-04-29 06:17:38,389 | INFO     | monitor loop #4559: job 0:6617691499 is in state 'finished'
[2025-04-29 08:17:53] 2025-04-29 06:17:38,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 08:17:53] 2025-04-29 06:17:40,892 | INFO     | monitor loop #4560: job 0:6617691499 is in state 'finished'
[2025-04-29 08:17:53] 2025-04-29 06:17:40,892 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-29 08:17:53] 2025-04-29 06:17:41,104 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-29 08:17:53] 2025-04-29 06:17:41,104 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6617691499/memory_monitor_summary.json (trf name=prmon)
[2025-04-29 08:17:53] 2025-04-29 06:17:41,106 | INFO     | extracted standard info from prmon json
[2025-04-29 08:17:53] 2025-04-29 06:17:41,106 | INFO     | extracted standard memory fields from prmon json
[2025-04-29 08:17:53] 2025-04-29 06:17:41,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-29 08:17:53] 2025-04-29 06:17:41,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-29 08:17:53] 2025-04-29 06:17:41,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-29 08:17:53] 2025-04-29 06:17:41,130 | INFO     | fitting pss+swap vs Time
[2025-04-29 08:17:53] 2025-04-29 06:17:41,132 | INFO     | sum of square deviations: 323289698777.5
[2025-04-29 08:17:53] 2025-04-29 06:17:41,178 | INFO     | sum of deviations: -16679508952.999962
[2025-04-29 08:17:53] 2025-04-29 06:17:41,178 | INFO     | mean x: 1745876520.5
[2025-04-29 08:17:53] 2025-04-29 06:17:41,178 | INFO     | mean y: 2268209.398422091
[2025-04-29 08:17:53] 2025-04-29 06:17:41,178 | INFO     | -- intersect: 92343343.75818989
[2025-04-29 08:17:53] 2025-04-29 06:17:41,179 | INFO     | intersect: 92343343.75818989
[2025-04-29 08:17:53] 2025-04-29 06:17:41,180 | INFO     | chi2: 3.1948831877680335
[2025-04-29 08:17:53] 2025-04-29 06:17:41,181 | INFO     | sum of square deviations: 318530846760.0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,211 | INFO     | sum of deviations: 43007089127.99999
[2025-04-29 08:17:53] 2025-04-29 06:17:41,211 | INFO     | mean x: 1745876368.0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,212 | INFO     | mean y: 2270114.993062438
[2025-04-29 08:17:53] 2025-04-29 06:17:41,212 | INFO     | -- intersect: -233452928.24996275
[2025-04-29 08:17:53] 2025-04-29 06:17:41,212 | INFO     | intersect: -233452928.24996275
[2025-04-29 08:17:53] 2025-04-29 06:17:41,213 | INFO     | chi2: 2.5431103777840542
[2025-04-29 08:17:53] 2025-04-29 06:17:41,214 | INFO     | current chi2=2.5431103777840542 (change=20.400520822775746 %)
[2025-04-29 08:17:53] 2025-04-29 06:17:41,214 | INFO     | right removable region: 1008
[2025-04-29 08:17:53] 2025-04-29 06:17:41,216 | INFO     | sum of square deviations: 318530846760.0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,244 | INFO     | sum of deviations: -209716992950.99994
[2025-04-29 08:17:53] 2025-04-29 06:17:41,245 | INFO     | mean x: 1745876673.0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,245 | INFO     | mean y: 2274389.093161546
[2025-04-29 08:17:53] 2025-04-29 06:17:41,245 | INFO     | -- intersect: 1151739220.04791
[2025-04-29 08:17:53] 2025-04-29 06:17:41,245 | INFO     | intersect: 1151739220.04791
[2025-04-29 08:17:53] 2025-04-29 06:17:41,246 | INFO     | chi2: 1.3711982653531276
[2025-04-29 08:17:53] 2025-04-29 06:17:41,247 | INFO     | current chi2=1.3711982653531276 (change=57.08142724582505 %)
[2025-04-29 08:17:53] 2025-04-29 06:17:41,248 | INFO     | sum of square deviations: 313818925855.0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,276 | INFO     | sum of deviations: -209926499311.5
[2025-04-29 08:17:53] 2025-04-29 06:17:41,276 | INFO     | mean x: 1745876825.5
[2025-04-29 08:17:53] 2025-04-29 06:17:41,276 | INFO     | mean y: 2274392.7260956177
[2025-04-29 08:17:53] 2025-04-29 06:17:41,276 | INFO     | -- intersect: 1170163834.727543
[2025-04-29 08:17:53] 2025-04-29 06:17:41,276 | INFO     | intersect: 1170163834.727543
[2025-04-29 08:17:53] 2025-04-29 06:17:41,278 | INFO     | chi2: 1.3213855116924111
[2025-04-29 08:17:53] 2025-04-29 06:17:41,278 | INFO     | current chi2=1.3213855116924111 (change=3.632790014352015 %)
[2025-04-29 08:17:53] 2025-04-29 06:17:41,278 | INFO     | left removable region: 20
[2025-04-29 08:17:53] 2025-04-29 06:17:41,280 | INFO     | sum of square deviations: 299053447147.0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,306 | INFO     | sum of deviations: -43605794855.99991
[2025-04-29 08:17:53] 2025-04-29 06:17:41,307 | INFO     | mean x: 1745876947.5
[2025-04-29 08:17:53] 2025-04-29 06:17:41,307 | INFO     | mean y: 2272871.479757085
[2025-04-29 08:17:53] 2025-04-29 06:17:41,307 | INFO     | -- intersect: 256843928.0677869
[2025-04-29 08:17:53] 2025-04-29 06:17:41,307 | INFO     | intersect: 256843928.0677869
[2025-04-29 08:17:53] 2025-04-29 06:17:41,309 | INFO     | chi2: 0.4500823939414572
[2025-04-29 08:17:53] 2025-04-29 06:17:41,309 | INFO     | -- intersect: 256843928.0677869
[2025-04-29 08:17:53] 2025-04-29 06:17:41,309 | INFO     | current memory leak: -0.15 B/s (using 988 data points, chi2=0.45)
[2025-04-29 08:17:53] 2025-04-29 06:17:41,311 | INFO     | ..............................
[2025-04-29 08:17:53] 2025-04-29 06:17:41,311 | INFO     | . Timing measurements:
[2025-04-29 08:17:53] 2025-04-29 06:17:41,311 | INFO     | . get job = 0 s
[2025-04-29 08:17:53] 2025-04-29 06:17:41,311 | INFO     | . initial setup = 2 s
[2025-04-29 08:17:53] 2025-04-29 06:17:41,312 | INFO     | . payload setup = 8 s
[2025-04-29 08:17:53] 2025-04-29 06:17:41,312 | INFO     | . stage-in = 0 s
[2025-04-29 08:17:53] 2025-04-29 06:17:41,312 | INFO     | . payload execution = 61819 s
[2025-04-29 08:17:53] 2025-04-29 06:17:41,312 | INFO     | . stage-out = 6 s
[2025-04-29 08:17:53] 2025-04-29 06:17:41,312 | INFO     | . log creation = 0 s
[2025-04-29 08:17:53] 2025-04-29 06:17:41,312 | INFO     | ..............................
[2025-04-29 08:17:53] 2025-04-29 06:17:41,504 | INFO     | 
[2025-04-29 08:17:53] 2025-04-29 06:17:41,504 | INFO     | job summary report
[2025-04-29 08:17:53] 2025-04-29 06:17:41,504 | INFO     | --------------------------------------------------
[2025-04-29 08:17:53] 2025-04-29 06:17:41,505 | INFO     | PanDA job id: 6617691499
[2025-04-29 08:17:53] 2025-04-29 06:17:41,505 | INFO     | task id: 44292257
[2025-04-29 08:17:53] 2025-04-29 06:17:41,505 | INFO     | errors: (none)
[2025-04-29 08:17:53] 2025-04-29 06:17:41,505 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-29 08:17:53] 2025-04-29 06:17:41,506 | INFO     | pilot state: finished 
[2025-04-29 08:17:53] 2025-04-29 06:17:41,506 | INFO     | transexitcode: 0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,506 | INFO     | exeerrorcode: 0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,506 | INFO     | exeerrordiag: 
[2025-04-29 08:17:53] 2025-04-29 06:17:41,507 | INFO     | exitcode: 0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,507 | INFO     | exitmsg: OK
[2025-04-29 08:17:53] 2025-04-29 06:17:41,507 | INFO     | cpuconsumptiontime: 119370 s
[2025-04-29 08:17:53] 2025-04-29 06:17:41,507 | INFO     | nevents: 400
[2025-04-29 08:17:53] 2025-04-29 06:17:41,508 | INFO     | neventsw: 0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,508 | INFO     | pid: 2152740
[2025-04-29 08:17:53] 2025-04-29 06:17:41,508 | INFO     | pgrp: 2152740
[2025-04-29 08:17:53] 2025-04-29 06:17:41,508 | INFO     | corecount: 2
[2025-04-29 08:17:53] 2025-04-29 06:17:41,509 | INFO     | event service: False
[2025-04-29 08:17:53] 2025-04-29 06:17:41,509 | INFO     | sizes: {0: 2393510, 1: 2393594, 2: 2393793, 7: 2393999, 13: 2394027, 61831: 2446267, 61839: 2455222, 61842: 2455278, 61855: 2455448}
[2025-04-29 08:17:53] 2025-04-29 06:17:41,509 | INFO     | --------------------------------------------------
[2025-04-29 08:17:53] 2025-04-29 06:17:41,509 | INFO     | 
[2025-04-29 08:17:53] 2025-04-29 06:17:41,510 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-04-29 08:17:53] 2025-04-29 06:17:41,539 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,539 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,540 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-29 08:17:53] 2025-04-29 06:17:41,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-29 08:17:53] 2025-04-29 06:17:41,543 | INFO     | job 6617691499 has completed (purged errors)
[2025-04-29 08:17:53] 2025-04-29 06:17:41,543 | INFO     | overall cleanup function is called
[2025-04-29 08:17:53] 2025-04-29 06:17:42,552 | INFO     | --- collectZombieJob: --- 10, [2152740]
[2025-04-29 08:17:53] 2025-04-29 06:17:42,553 | INFO     | zombie collector waiting for pid 2152740
[2025-04-29 08:17:53] 2025-04-29 06:17:42,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-29 08:17:53] 2025-04-29 06:17:42,553 | INFO     | collected zombie processes
[2025-04-29 08:17:53] 2025-04-29 06:17:42,553 | INFO     | will attempt to kill all subprocesses of pid=2152740
[2025-04-29 08:17:53] 2025-04-29 06:17:42,652 | INFO     | process IDs to be killed: [2152740] (in reverse order)
[2025-04-29 08:17:53] 2025-04-29 06:17:42,703 | WARNING  | found no corresponding commands to process id(s)
[2025-04-29 08:17:53] 2025-04-29 06:17:42,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-29 08:17:53] 2025-04-29 06:17:42,707 | INFO     | did not find any defunct processes belonging to 2152740
[2025-04-29 08:17:53] 2025-04-29 06:17:42,712 | INFO     | did not find any defunct processes belonging to 2152740
[2025-04-29 08:17:53] 2025-04-29 06:17:42,713 | INFO     | ready for new job
[2025-04-29 08:17:53] 2025-04-29 06:17:42,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-29 08:17:53] 2025-04-29 06:17:42,716 | INFO     | **************************************
[2025-04-29 08:17:53] 2025-04-29 06:17:42,717 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-29 08:17:53] 2025-04-29 06:17:42,717 | INFO     | **************************************
[2025-04-29 08:17:53] 2025-04-29 06:17:42,717 | INFO     | 
[2025-04-29 08:17:53] 2025-04-29 06:17:42,718 | INFO     | pilot is running in a VM
[2025-04-29 08:17:53] 2025-04-29 06:17:42,718 | INFO     | architecture information:
[2025-04-29 08:17:53] 2025-04-29 06:17:42,718 | INFO     | executing command: cat /etc/os-release
[2025-04-29 08:17:53] 2025-04-29 06:17:42,739 | INFO     | cat /etc/os-release:
[2025-04-29 08:17:53] NAME="CentOS Linux"
[2025-04-29 08:17:53] VERSION="7 (Core)"
[2025-04-29 08:17:53] ID="centos"
[2025-04-29 08:17:53] ID_LIKE="rhel fedora"
[2025-04-29 08:17:53] VERSION_ID="7"
[2025-04-29 08:17:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-29 08:17:53] ANSI_COLOR="0;31"
[2025-04-29 08:17:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-29 08:17:53] HOME_URL="https://www.centos.org/"
[2025-04-29 08:17:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-29 08:17:53] 
[2025-04-29 08:17:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-29 08:17:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-29 08:17:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-29 08:17:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-29 08:17:53] 
[2025-04-29 08:17:53] 2025-04-29 06:17:42,739 | INFO     | **************************************
[2025-04-29 08:17:53] 2025-04-29 06:17:43,243 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-04-29 08:17:53] 2025-04-29 06:17:43,271 | INFO     | sufficient remaining disk space (46644854784 B)
[2025-04-29 08:17:53] 2025-04-29 06:17:43,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-29 08:17:53] 2025-04-29 06:17:43,272 | INFO     | current server update state: UPDATING_FINAL
[2025-04-29 08:17:53] 2025-04-29 06:17:43,273 | INFO     | update_server=False
[2025-04-29 08:17:53] 2025-04-29 06:17:43,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-29 08:17:53] 2025-04-29 06:17:43,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-29 08:17:53] 2025-04-29 06:17:43,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-29 08:17:53] 2025-04-29 06:17:43,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-29 08:17:53] 2025-04-29 06:17:43,304 | INFO     | all payload control threads have been joined
[2025-04-29 08:17:53] 2025-04-29 06:17:43,396 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-29 08:17:53] 2025-04-29 06:17:43,396 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-29 08:17:53] 2025-04-29 06:17:43,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-29 08:17:53] 2025-04-29 06:17:43,399 | INFO     | will abort loop
[2025-04-29 08:17:53] 2025-04-29 06:17:43,529 | INFO     | all data control threads have been joined
[2025-04-29 08:17:53] 2025-04-29 06:17:43,717 | INFO     | found 0 job(s) in 20 queues
[2025-04-29 08:17:53] 2025-04-29 06:17:43,718 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-29 08:17:53] 2025-04-29 06:17:43,718 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-29 08:17:53] 2025-04-29 06:17:44,016 | INFO     | all job control threads have been joined
[2025-04-29 08:17:53] 2025-04-29 06:17:44,275 | INFO     | [job] retrieve thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:44,279 | INFO     | [job] queue monitor thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:44,309 | INFO     | [payload] control thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:44,405 | INFO     | [job] job monitor thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:44,535 | INFO     | [data] control thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:44,541 | INFO     | [data] copytool_in thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:44,544 | INFO     | [payload] validate_pre thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:44,638 | INFO     | [job] validate thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:45,022 | INFO     | [job] control thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:45,040 | INFO     | [payload] execute_payloads thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:45,248 | INFO     | [job] create_data_payload thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:45,281 | INFO     | [data] copytool_out thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:45,293 | INFO     | [payload] failed_post thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:45,627 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:45,680 | INFO     | [payload] validate_post thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:47,299 | INFO     | [data] queue_monitor thread has finished
[2025-04-29 08:17:53] 2025-04-29 06:17:48,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976399324992)>', '<ExcThread(monitor, started 139976016660224)>']
[2025-04-29 08:17:53] 2025-04-29 06:17:48,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-29 08:17:53] 2025-04-29 06:17:48,745 | INFO     | [monitor] control thread has ended
[2025-04-29 08:17:53] 2025-04-29 06:17:53,232 | INFO     | all workflow threads have been joined
[2025-04-29 08:17:53] 2025-04-29 06:17:53,232 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-29 08:17:53] 2025-04-29 06:17:53,233 | INFO     | traces error code: 0
[2025-04-29 08:17:53] 2025-04-29 06:17:53,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-29 08:17:53] 2025-04-29 06:17:53,405 [wrapper] ==== pilot stdout END ====
[2025-04-29 08:17:53] 2025-04-29 06:17:53,410 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-29 08:17:53] 2025-04-29 06:17:53,414 [wrapper] pilotpid: 2146405
[2025-04-29 08:17:53] 2025-04-29 06:17:53,419 [wrapper] Pilot exit status: 0
[2025-04-29 08:17:53] 2025-04-29 06:17:53,436 [wrapper] pandaids: 6617691499
[2025-04-29 08:17:53] 2025-04-29 06:17:53,470 [wrapper] cleanup supervisor_pilot 2240223 2146406
[2025-04-29 08:17:53] 2025-04-29 06:17:53,475 [wrapper] Test setup, not cleaning
[2025-04-29 08:17:53] 2025-04-29 06:17:53,479 [wrapper] apfmon messages muted
[2025-04-29 08:17:53] 2025-04-29 06:17:53,483 [wrapper] ==== wrapper stdout END ====
[2025-04-29 08:17:53] 2025-04-29 06:17:53,488 [wrapper] ==== wrapper stderr END ====
[2025-04-29 08:17:53]  *** Error codes and diagnostics ***
[2025-04-29 08:17:53]     "exeErrorCode": 0,
[2025-04-29 08:17:53]     "exeErrorDiag": "",
[2025-04-29 08:17:53]     "pilotErrorCode": 0,
[2025-04-29 08:17:53]     "pilotErrorDiag": "",
[2025-04-29 08:17:53]  *** Listing of results directory ***
[2025-04-29 08:17:53] total 428556
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc    495897 Apr 27 18:45 pilot3.tar.gz
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc      5111 Apr 27 18:54 queuedata.json
[2025-04-29 08:17:53] -rwx------ 1 boinc boinc     37140 Apr 27 18:54 runpilot2-wrapper.sh
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc       100 Apr 28 15:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-29 08:17:53] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 15:06 run_atlas
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc       105 Apr 28 15:06 job.xml
[2025-04-29 08:17:53] -rw-r--r-- 2 boinc boinc 224986241 Apr 28 15:06 EVNT.44292255._002872.pool.root.1
[2025-04-29 08:17:53] -rw-r--r-- 2 boinc boinc     17569 Apr 28 15:06 start_atlas.sh
[2025-04-29 08:17:53] drwxrwx--x 2 boinc boinc      4096 Apr 28 15:06 shared
[2025-04-29 08:17:53] -rw-r--r-- 2 boinc boinc    508883 Apr 28 15:06 input.tar.gz
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc         0 Apr 28 15:06 boinc_lockfile
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc      2550 Apr 28 15:06 pandaJob.out
[2025-04-29 08:17:53] -rw------- 1 boinc boinc       461 Apr 28 15:06 setup.sh.local
[2025-04-29 08:17:53] -rw------- 1 boinc boinc    993476 Apr 28 15:06 agis_schedconf.cvmfs.json
[2025-04-29 08:17:53] drwx------ 4 boinc boinc      4096 Apr 28 15:06 pilot3
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc      6410 Apr 28 21:07 init_data.xml
[2025-04-29 08:17:53] -rw------- 1 boinc boinc 197772109 Apr 29 08:16 HITS.44292257._022050.pool.root.1
[2025-04-29 08:17:53] -rw------- 1 boinc boinc        95 Apr 29 08:16 pilot_heartbeat.json
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc       531 Apr 29 08:17 boinc_task_state.xml
[2025-04-29 08:17:53] -rw------- 1 boinc boinc      1013 Apr 29 08:17 memory_monitor_summary.json
[2025-04-29 08:17:53] -rw------- 1 boinc boinc   1596659 Apr 29 08:17 agis_ddmendpoints.agis.ALL.json
[2025-04-29 08:17:53] -rw------- 1 boinc boinc    688454 Apr 29 08:17 log.44292257._022050.job.log.tgz.1
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc      8192 Apr 29 08:17 boinc_mmap_file
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc        29 Apr 29 08:17 wrapper_checkpoint.txt
[2025-04-29 08:17:53] -rw------- 1 boinc boinc      7649 Apr 29 08:17 heartbeat.json
[2025-04-29 08:17:53] -rw------- 1 boinc boinc      4608 Apr 29 08:17 pilotlog.txt
[2025-04-29 08:17:53] -rw------- 1 boinc boinc   5430144 Apr 29 08:17 log.44292257._022050.job.log.1
[2025-04-29 08:17:53] -rw------- 1 boinc boinc       357 Apr 29 08:17 output.list
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc       620 Apr 29 08:17 runtime_log
[2025-04-29 08:17:53] -rw------- 1 boinc boinc   6133760 Apr 29 08:17 result.tar.gz
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc     11490 Apr 29 08:17 runtime_log.err
[2025-04-29 08:17:53] -rw------- 1 boinc boinc       657 Apr 29 08:17 pw7MDm6RKT7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXpsLDmK9Q0An.diag
[2025-04-29 08:17:53] -rw-r--r-- 1 boinc boinc     20768 Apr 29 08:17 stderr.txt
[2025-04-29 08:17:53] HITS file was successfully produced:
[2025-04-29 08:17:53] -rw------- 1 boinc boinc 197772109 Apr 29 08:16 shared/HITS.pool.root.1
[2025-04-29 08:17:53]  *** Contents of shared directory: ***
[2025-04-29 08:17:53] total 419376
[2025-04-29 08:17:53] -rw-r--r-- 2 boinc boinc 224986241 Apr 28 15:06 ATLAS.root_0
[2025-04-29 08:17:53] -rw-r--r-- 2 boinc boinc     17569 Apr 28 15:06 start_atlas.sh
[2025-04-29 08:17:53] -rw-r--r-- 2 boinc boinc    508883 Apr 28 15:06 input.tar.gz
[2025-04-29 08:17:53] -rw------- 1 boinc boinc 197772109 Apr 29 08:16 HITS.pool.root.1
[2025-04-29 08:17:53] -rw------- 1 boinc boinc   6133760 Apr 29 08:17 result.tar.gz
08:17:54 (2142826): run_atlas exited; CPU time 120159.561007
08:17:54 (2142826): called boinc_finish(0)

</stderr_txt>
]]>

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