Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:46:06 (46452): wrapper (7.7.26015): starting
12:46:06 (46452): wrapper: running run_atlas (--nthreads 8)
[2025-04-27 12:46:06] Arguments: --nthreads 8
[2025-04-27 12:46:06] Threads: 8
[2025-04-27 12:46:06] Checking for CVMFS
[2025-04-27 12:46:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-27 12:46:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-27 12:46:08] Running cvmfs_config stat atlas.cern.ch
[2025-04-27 12:46:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-27 12:46:10] 2.11.2.0 21799 38300 371376 145344 1 316 16310840 18432001 11771 130560 0 154375487 98.980 363173644 35641 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-27 12:46:10] CVMFS is ok
[2025-04-27 12:46:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-27 12:46:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-27 12:46:10] Further information can be found at the LHC@home message board.
[2025-04-27 12:46:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-27 12:46:10] Checking for apptainer binary...
[2025-04-27 12:46:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-27 12:46:10] Running /usr/bin/apptainer --version
[2025-04-27 12:46:10] apptainer version 1.3.2-1.el7
[2025-04-27 12:46:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-27 12:46:43] c-211-14.aglt2.org
[2025-04-27 12:46:43] apptainer works
[2025-04-27 12:46:43] Set ATHENA_PROC_NUMBER=8
[2025-04-27 12:46:43] Set ATHENA_CORE_NUMBER=8
[2025-04-27 12:46:43] Starting ATLAS job with PandaID=6617679233
[2025-04-27 12:46:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 01:09:50]  *** The last 200 lines of the pilot log: ***
[2025-04-28 01:09:50] 2025-04-28 05:09:35,899 | INFO     | mean x: 1745794852.198895
[2025-04-28 01:09:50] 2025-04-28 05:09:35,900 | INFO     | mean y: 2449728.9640883976
[2025-04-28 01:09:50] 2025-04-28 05:09:35,900 | INFO     | -- intersect: -9575738202.6929
[2025-04-28 01:09:50] 2025-04-28 05:09:35,900 | INFO     | intersect: -9575738202.6929
[2025-04-28 01:09:50] 2025-04-28 05:09:35,901 | INFO     | chi2: 7.876117998310779
[2025-04-28 01:09:50] 2025-04-28 05:09:35,903 | INFO     | sum of square deviations: 115255978019.9
[2025-04-28 01:09:50] 2025-04-28 05:09:35,912 | INFO     | sum of deviations: 689634969100.2853
[2025-04-28 01:09:50] 2025-04-28 05:09:35,912 | INFO     | mean x: 1745794699.7037551
[2025-04-28 01:09:50] 2025-04-28 05:09:35,913 | INFO     | mean y: 2452483.3018080667
[2025-04-28 01:09:50] 2025-04-28 05:09:35,913 | INFO     | -- intersect: -10443522592.956417
[2025-04-28 01:09:50] 2025-04-28 05:09:35,913 | INFO     | intersect: -10443522592.956417
[2025-04-28 01:09:50] 2025-04-28 05:09:35,914 | INFO     | chi2: 7.072145645916426
[2025-04-28 01:09:50] 2025-04-28 05:09:35,914 | INFO     | current chi2=7.072145645916426 (change=10.207723558316212 %)
[2025-04-28 01:09:50] 2025-04-28 05:09:35,914 | INFO     | right removable region: 718
[2025-04-28 01:09:50] 2025-04-28 05:09:35,915 | INFO     | sum of square deviations: 115255669359.90004
[2025-04-28 01:09:50] 2025-04-28 05:09:35,926 | INFO     | sum of deviations: 428190129554.3296
[2025-04-28 01:09:50] 2025-04-28 05:09:35,926 | INFO     | mean x: 1745795004.7037551
[2025-04-28 01:09:50] 2025-04-28 05:09:35,926 | INFO     | mean y: 2463415.100139082
[2025-04-28 01:09:50] 2025-04-28 05:09:35,926 | INFO     | -- intersect: -6483397049.647509
[2025-04-28 01:09:50] 2025-04-28 05:09:35,927 | INFO     | intersect: -6483397049.647509
[2025-04-28 01:09:50] 2025-04-28 05:09:35,927 | INFO     | chi2: 4.431835685833265
[2025-04-28 01:09:50] 2025-04-28 05:09:35,928 | INFO     | current chi2=4.431835685833265 (change=43.73070989053519 %)
[2025-04-28 01:09:50] 2025-04-28 05:09:35,928 | INFO     | sum of square deviations: 112867684209.90633
[2025-04-28 01:09:50] 2025-04-28 05:09:35,943 | INFO     | sum of deviations: 269134027988.08112
[2025-04-28 01:09:50] 2025-04-28 05:09:35,943 | INFO     | mean x: 1745795157.2086835
[2025-04-28 01:09:50] 2025-04-28 05:09:35,943 | INFO     | mean y: 2473571.341736695
[2025-04-28 01:09:50] 2025-04-28 05:09:35,943 | INFO     | -- intersect: -4160390989.854067
[2025-04-28 01:09:50] 2025-04-28 05:09:35,943 | INFO     | intersect: -4160390989.854067
[2025-04-28 01:09:50] 2025-04-28 05:09:35,944 | INFO     | chi2: 2.6894054290203755
[2025-04-28 01:09:50] 2025-04-28 05:09:35,945 | INFO     | current chi2=2.6894054290203755 (change=39.31621974123983 %)
[2025-04-28 01:09:50] 2025-04-28 05:09:35,946 | INFO     | sum of square deviations: 110512908984.87752
[2025-04-28 01:09:50] 2025-04-28 05:09:35,965 | INFO     | sum of deviations: 117734495255.37807
[2025-04-28 01:09:50] 2025-04-28 05:09:35,965 | INFO     | mean x: 1745795309.7136812
[2025-04-28 01:09:50] 2025-04-28 05:09:35,965 | INFO     | mean y: 2483376.5486600846
[2025-04-28 01:09:50] 2025-04-28 05:09:35,965 | INFO     | -- intersect: -1857392827.0220256
[2025-04-28 01:09:50] 2025-04-28 05:09:35,965 | INFO     | intersect: -1857392827.0220256
[2025-04-28 01:09:50] 2025-04-28 05:09:35,966 | INFO     | chi2: 1.1241753494776883
[2025-04-28 01:09:50] 2025-04-28 05:09:35,966 | INFO     | current chi2=1.1241753494776883 (change=58.19985572472155 %)
[2025-04-28 01:09:50] 2025-04-28 05:09:35,968 | INFO     | sum of square deviations: 108191111122.3125
[2025-04-28 01:09:50] 2025-04-28 05:09:35,995 | INFO     | sum of deviations: 57342280771.59375
[2025-04-28 01:09:50] 2025-04-28 05:09:35,995 | INFO     | mean x: 1745795462.21875
[2025-04-28 01:09:50] 2025-04-28 05:09:35,995 | INFO     | mean y: 2487339.5610795454
[2025-04-28 01:09:50] 2025-04-28 05:09:35,995 | INFO     | -- intersect: -922800260.5556029
[2025-04-28 01:09:50] 2025-04-28 05:09:35,995 | INFO     | intersect: -922800260.5556029
[2025-04-28 01:09:50] 2025-04-28 05:09:35,996 | INFO     | chi2: 0.8695484291890063
[2025-04-28 01:09:50] 2025-04-28 05:09:35,996 | INFO     | current chi2=0.8695484291890063 (change=22.650107067993094 %)
[2025-04-28 01:09:50] 2025-04-28 05:09:35,997 | INFO     | left removable region: 40
[2025-04-28 01:09:50] 2025-04-28 05:09:35,997 | INFO     | sum of square deviations: 96640940602.24185
[2025-04-28 01:09:50] 2025-04-28 05:09:36,026 | INFO     | sum of deviations: 69545822813.5575
[2025-04-28 01:09:50] 2025-04-28 05:09:36,026 | INFO     | mean x: 1745795889.2359881
[2025-04-28 01:09:50] 2025-04-28 05:09:36,027 | INFO     | mean y: 2492770.690265487
[2025-04-28 01:09:50] 2025-04-28 05:09:36,027 | INFO     | -- intersect: -1253836180.8372052
[2025-04-28 01:09:50] 2025-04-28 05:09:36,027 | INFO     | intersect: -1253836180.8372052
[2025-04-28 01:09:50] 2025-04-28 05:09:36,028 | INFO     | chi2: 0.004453883117967752
[2025-04-28 01:09:50] 2025-04-28 05:09:36,028 | INFO     | -- intersect: -1253836180.8372052
[2025-04-28 01:09:50] 2025-04-28 05:09:36,028 | INFO     | current memory leak: 0.72 B/s (using 678 data points, chi2=0.00)
[2025-04-28 01:09:50] 2025-04-28 05:09:36,039 | INFO     | ..............................
[2025-04-28 01:09:50] 2025-04-28 05:09:36,039 | INFO     | . Timing measurements:
[2025-04-28 01:09:50] 2025-04-28 05:09:36,040 | INFO     | . get job = 1 s
[2025-04-28 01:09:50] 2025-04-28 05:09:36,040 | INFO     | . initial setup = 11 s
[2025-04-28 01:09:50] 2025-04-28 05:09:36,040 | INFO     | . payload setup = 61 s
[2025-04-28 01:09:50] 2025-04-28 05:09:36,040 | INFO     | . stage-in = 1 s
[2025-04-28 01:09:50] 2025-04-28 05:09:36,040 | INFO     | . payload execution = 44192 s
[2025-04-28 01:09:50] 2025-04-28 05:09:36,047 | INFO     | . stage-out = 7 s
[2025-04-28 01:09:50] 2025-04-28 05:09:36,047 | INFO     | . log creation = 1 s
[2025-04-28 01:09:50] 2025-04-28 05:09:36,047 | INFO     | ..............................
[2025-04-28 01:09:50] 2025-04-28 05:09:36,247 | INFO     | 
[2025-04-28 01:09:50] 2025-04-28 05:09:36,247 | INFO     | job summary report
[2025-04-28 01:09:50] 2025-04-28 05:09:36,247 | INFO     | --------------------------------------------------
[2025-04-28 01:09:50] 2025-04-28 05:09:36,247 | INFO     | PanDA job id: 6617679233
[2025-04-28 01:09:50] 2025-04-28 05:09:36,247 | INFO     | task id: 44292257
[2025-04-28 01:09:50] 2025-04-28 05:09:36,247 | INFO     | errors: (none)
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | pilot state: finished 
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | transexitcode: 0
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | exeerrorcode: 0
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | exeerrordiag: 
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | exitcode: 0
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | exitmsg: OK
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | cpuconsumptiontime: 61839 s
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | nevents: 400
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | neventsw: 0
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | pid: 18081
[2025-04-28 01:09:50] 2025-04-28 05:09:36,248 | INFO     | pgrp: 18081
[2025-04-28 01:09:50] 2025-04-28 05:09:36,249 | INFO     | corecount: 8
[2025-04-28 01:09:50] 2025-04-28 05:09:36,249 | INFO     | event service: False
[2025-04-28 01:09:50] 2025-04-28 05:09:36,249 | INFO     | sizes: {0: 2393557, 1: 2393585, 2: 2393756, 13: 2393784, 24: 2393840, 35: 2393868, 47: 2394024, 58: 2394080, 60: 2394314, 70: 2394342, 44258: 2436825, 44259: 24371
[2025-04-28 01:09:50] 2025-04-28 05:09:36,249 | INFO     | --------------------------------------------------
[2025-04-28 01:09:50] 2025-04-28 05:09:36,249 | INFO     | 
[2025-04-28 01:09:50] 2025-04-28 05:09:36,249 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-28 01:09:50] 2025-04-28 05:09:36,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,292 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 01:09:50] 2025-04-28 05:09:36,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,298 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 01:09:50] 2025-04-28 05:09:36,298 | INFO     | job 6617679233 has completed (purged errors)
[2025-04-28 01:09:50] 2025-04-28 05:09:36,298 | INFO     | overall cleanup function is called
[2025-04-28 01:09:50] 2025-04-28 05:09:36,621 | INFO     | PID=20119 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-28 01:09:50] 2025-04-28 05:09:36,621 | INFO     | .. there are 41 such processes running
[2025-04-28 01:09:50] 2025-04-28 05:09:37,310 | INFO     | --- collectZombieJob: --- 10, [18081]
[2025-04-28 01:09:50] 2025-04-28 05:09:37,310 | INFO     | zombie collector waiting for pid 18081
[2025-04-28 01:09:50] 2025-04-28 05:09:37,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 01:09:50] 2025-04-28 05:09:37,311 | INFO     | collected zombie processes
[2025-04-28 01:09:50] 2025-04-28 05:09:37,311 | INFO     | will attempt to kill all subprocesses of pid=18081
[2025-04-28 01:09:50] 2025-04-28 05:09:37,810 | INFO     | process IDs to be killed: [18081] (in reverse order)
[2025-04-28 01:09:50] 2025-04-28 05:09:37,977 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 01:09:50] 2025-04-28 05:09:37,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 01:09:50] 2025-04-28 05:09:37,989 | INFO     | did not find any defunct processes belonging to 18081
[2025-04-28 01:09:50] 2025-04-28 05:09:37,999 | INFO     | did not find any defunct processes belonging to 18081
[2025-04-28 01:09:50] 2025-04-28 05:09:38,000 | INFO     | ready for new job
[2025-04-28 01:09:50] 2025-04-28 05:09:38,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 01:09:50] 2025-04-28 05:09:38,003 | INFO     | **************************************
[2025-04-28 01:09:50] 2025-04-28 05:09:38,003 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 01:09:50] 2025-04-28 05:09:38,003 | INFO     | **************************************
[2025-04-28 01:09:50] 2025-04-28 05:09:38,003 | INFO     | 
[2025-04-28 01:09:50] 2025-04-28 05:09:38,005 | INFO     | architecture information:
[2025-04-28 01:09:50] 2025-04-28 05:09:38,006 | INFO     | executing command: cat /etc/os-release
[2025-04-28 01:09:50] 2025-04-28 05:09:38,023 | INFO     | cat /etc/os-release:
[2025-04-28 01:09:50] NAME="CentOS Linux"
[2025-04-28 01:09:50] VERSION="7 (Core)"
[2025-04-28 01:09:50] ID="centos"
[2025-04-28 01:09:50] ID_LIKE="rhel fedora"
[2025-04-28 01:09:50] VERSION_ID="7"
[2025-04-28 01:09:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 01:09:50] ANSI_COLOR="0;31"
[2025-04-28 01:09:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 01:09:50] HOME_URL="https://www.centos.org/"
[2025-04-28 01:09:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 01:09:50] 
[2025-04-28 01:09:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 01:09:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 01:09:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 01:09:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 01:09:50] 
[2025-04-28 01:09:50] 2025-04-28 05:09:38,024 | INFO     | **************************************
[2025-04-28 01:09:50] 2025-04-28 05:09:38,527 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-28 01:09:50] 2025-04-28 05:09:38,570 | INFO     | sufficient remaining disk space (56732155904 B)
[2025-04-28 01:09:50] 2025-04-28 05:09:38,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 01:09:50] 2025-04-28 05:09:38,571 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 01:09:50] 2025-04-28 05:09:38,571 | INFO     | update_server=False
[2025-04-28 01:09:50] 2025-04-28 05:09:38,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 01:09:50] 2025-04-28 05:09:38,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 01:09:50] 2025-04-28 05:09:38,628 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 01:09:50] 2025-04-28 05:09:38,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 01:09:50] 2025-04-28 05:09:38,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 01:09:50] 2025-04-28 05:09:38,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 01:09:50] 2025-04-28 05:09:38,630 | INFO     | aborting loop
[2025-04-28 01:09:50] 2025-04-28 05:09:38,688 | INFO     | all data control threads have been joined
[2025-04-28 01:09:50] 2025-04-28 05:09:39,317 | INFO     | all payload control threads have been joined
[2025-04-28 01:09:50] 2025-04-28 05:09:39,419 | INFO     | all job control threads have been joined
[2025-04-28 01:09:50] 2025-04-28 05:09:39,577 | INFO     | [job] retrieve thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:39,635 | INFO     | [job] job monitor thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:39,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 01:09:50] 2025-04-28 05:09:39,694 | INFO     | [data] control thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:39,721 | INFO     | [payload] failed_post thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:39,863 | INFO     | [data] copytool_in thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:39,867 | INFO     | [job] validate thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:40,322 | INFO     | [payload] control thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:40,426 | INFO     | [job] control thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:40,450 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:40,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:40,460 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:40,466 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:40,709 | INFO     | [payload] validate_post thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:41,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 01:09:50] 2025-04-28 05:09:41,673 | INFO     | [data] copytool_out thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:42,265 | INFO     | [job] queue monitor thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:42,580 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 01:09:50] 2025-04-28 05:09:43,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139634278405952)>', '<ExcThread(monitor, started 139633396537088)>']
[2025-04-28 01:09:50] 2025-04-28 05:09:44,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 01:09:50] 2025-04-28 05:09:44,666 | INFO     | [monitor] control thread has ended
[2025-04-28 01:09:50] 2025-04-28 05:09:48,971 | INFO     | all workflow threads have been joined
[2025-04-28 01:09:50] 2025-04-28 05:09:48,971 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 01:09:50] 2025-04-28 05:09:48,972 | INFO     | traces error code: 0
[2025-04-28 01:09:50] 2025-04-28 05:09:48,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 01:09:50] 2025-04-28 05:09:49,255 [wrapper] ==== pilot stdout END ====
[2025-04-28 01:09:50] 2025-04-28 05:09:49,298 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 01:09:50] 2025-04-28 05:09:49,309 [wrapper] pilotpid: 20119
[2025-04-28 01:09:50] 2025-04-28 05:09:49,323 [wrapper] Pilot exit status: 0
[2025-04-28 01:09:50] 2025-04-28 05:09:49,391 [wrapper] pandaids: 6617679233
[2025-04-28 01:09:50] 2025-04-28 05:09:49,518 [wrapper] cleanup supervisor_pilot 21020 20120
[2025-04-28 01:09:50] 2025-04-28 05:09:49,523 [wrapper] Test setup, not cleaning
[2025-04-28 01:09:50] 2025-04-28 05:09:49,527 [wrapper] apfmon messages muted
[2025-04-28 01:09:50] 2025-04-28 05:09:49,530 [wrapper] ==== wrapper stdout END ====
[2025-04-28 01:09:50] 2025-04-28 05:09:49,532 [wrapper] ==== wrapper stderr END ====
[2025-04-28 01:09:50]  *** Error codes and diagnostics ***
[2025-04-28 01:09:50]     "exeErrorCode": 0,
[2025-04-28 01:09:50]     "exeErrorDiag": "",
[2025-04-28 01:09:50]     "pilotErrorCode": 0,
[2025-04-28 01:09:50]     "pilotErrorDiag": "",
[2025-04-28 01:09:50]  *** Listing of results directory ***
[2025-04-28 01:09:50] total 234520
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas    495897 Apr 27 03:54 pilot3.tar.gz
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas      5111 Apr 27 04:01 queuedata.json
[2025-04-28 01:09:50] -rwx------ 1 boincer umatlas     37140 Apr 27 04:01 runpilot2-wrapper.sh
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas       100 Apr 27 12:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 01:09:50] -rwxr-xr-x 1 boincer umatlas      7986 Apr 27 12:46 run_atlas
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas       105 Apr 27 12:46 job.xml
[2025-04-28 01:09:50] -rw-r--r-- 2 boincer umatlas  28704518 Apr 27 12:46 EVNT.44292255._002434.pool.root.1
[2025-04-28 01:09:50] -rw-r--r-- 2 boincer umatlas     17569 Apr 27 12:46 start_atlas.sh
[2025-04-28 01:09:50] drwxrwx--x 2 boincer umatlas      4096 Apr 27 12:46 shared
[2025-04-28 01:09:50] -rw-r--r-- 2 boincer umatlas    508877 Apr 27 12:46 input.tar.gz
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas         0 Apr 27 12:46 boinc_lockfile
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas      2549 Apr 27 12:46 pandaJob.out
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas       467 Apr 27 12:47 setup.sh.local
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas    992879 Apr 27 12:49 agis_schedconf.cvmfs.json
[2025-04-28 01:09:50] drwx------ 4 boincer umatlas      4096 Apr 27 12:49 pilot3
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas 200046421 Apr 28 01:07 HITS.44292257._017941.pool.root.1
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas       531 Apr 28 01:07 boinc_task_state.xml
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas        95 Apr 28 01:08 pilot_heartbeat.json
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas      1055 Apr 28 01:08 memory_monitor_summary.json
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas   1596659 Apr 28 01:09 agis_ddmendpoints.agis.ALL.json
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas    611575 Apr 28 01:09 log.44292257._017941.job.log.tgz.1
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas      7745 Apr 28 01:09 heartbeat.json
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas      6131 Apr 28 01:09 init_data.xml
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas      8192 Apr 28 01:09 boinc_mmap_file
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas        28 Apr 28 01:09 wrapper_checkpoint.txt
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas      4353 Apr 28 01:09 pilotlog.txt
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas   3163320 Apr 28 01:09 log.44292257._017941.job.log.1
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas       357 Apr 28 01:09 output.list
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas       620 Apr 28 01:09 runtime_log
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas   3799040 Apr 28 01:09 result.tar.gz
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas     11419 Apr 28 01:09 runtime_log.err
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas       663 Apr 28 01:09 jBSMDmI8BT7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmLVBLDmwbkHdm.diag
[2025-04-28 01:09:50] -rw-r--r-- 1 boincer umatlas     20941 Apr 28 01:09 stderr.txt
[2025-04-28 01:09:50] HITS file was successfully produced:
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas 200046421 Apr 28 01:07 shared/HITS.pool.root.1
[2025-04-28 01:09:50]  *** Contents of shared directory: ***
[2025-04-28 01:09:50] total 227628
[2025-04-28 01:09:50] -rw-r--r-- 2 boincer umatlas  28704518 Apr 27 12:46 ATLAS.root_0
[2025-04-28 01:09:50] -rw-r--r-- 2 boincer umatlas     17569 Apr 27 12:46 start_atlas.sh
[2025-04-28 01:09:50] -rw-r--r-- 2 boincer umatlas    508877 Apr 27 12:46 input.tar.gz
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas 200046421 Apr 28 01:07 HITS.pool.root.1
[2025-04-28 01:09:50] -rw------- 1 boincer umatlas   3799040 Apr 28 01:09 result.tar.gz
01:09:51 (46452): run_atlas exited; CPU time 63586.560290
01:09:51 (46452): called boinc_finish(0)

</stderr_txt>
]]>

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