Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
10:14:03 (398195): wrapper (7.7.26015): starting
10:14:03 (398195): wrapper: running run_atlas (--nthreads 4)
[2025-04-28 10:14:03] Arguments: --nthreads 4
[2025-04-28 10:14:03] Threads: 4
[2025-04-28 10:14:03] Checking for CVMFS
[2025-04-28 10:14:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 10:14:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 10:14:03] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 10:14:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 10:14:03] 2.12.7.0 3078765 3421 61312 145365 2 187 3679141 6144001 916 130560 0 4171883 99.994 791910 11735 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-04-28 10:14:03] CVMFS is ok
[2025-04-28 10:14:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 10:14:03] Checking for apptainer binary...
[2025-04-28 10:14:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-28 10:14:03] Running /usr/bin/apptainer --version
[2025-04-28 10:14:03] apptainer version 1.4.0
[2025-04-28 10:14:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 10:14:03] Ryzen8
[2025-04-28 10:14:03] apptainer works
[2025-04-28 10:14:03] Set ATHENA_PROC_NUMBER=4
[2025-04-28 10:14:03] Set ATHENA_CORE_NUMBER=4
[2025-04-28 10:14:03] Starting ATLAS job with PandaID=6617461031
[2025-04-28 10:14:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 11:43:40]  *** The last 200 lines of the pilot log: ***
[2025-04-28 11:43:40]  is_altstaged=None
[2025-04-28 11:43:40]  is_tar=False
[2025-04-28 11:43:40]  lfn=log.44292257._009468.job.log.tgz.1
[2025-04-28 11:43:40]  mtime=0
[2025-04-28 11:43:40]  protocol_id=None
[2025-04-28 11:43:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-28 11:43:40]  replicas=None
[2025-04-28 11:43:40]  scope=mc23_13p6TeV
[2025-04-28 11:43:40]  status=None
[2025-04-28 11:43:40]  status_code=0
[2025-04-28 11:43:40]  storage_token=
[2025-04-28 11:43:40]  surl=/var/lib/boinc3/slots/0/PanDA_Pilot-6617461031/log.44292257._009468.job.log.tgz.1
[2025-04-28 11:43:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/e9/log.44292257._009468.job.log.tgz.1
[2025-04-28 11:43:40]  workdir=None
[2025-04-28 11:43:40] ]
[2025-04-28 11:43:40] 2025-04-28 09:43:21,499 | INFO     | transferring file log.44292257._009468.job.log.tgz.1 from /var/lib/boinc3/slots/0/PanDA_Pilot-6617461031/log.44292257._009468.job.log.tgz.1 to /var/lib/boinc3/slot
[2025-04-28 11:43:40] 2025-04-28 09:43:21,499 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc3/slots/0/PanDA_Pilot-6617461031/log.44292257._009468.job.log.tgz.1 /var/lib/boinc3/slots/0/log.44292257._009468.j
[2025-04-28 11:43:40] 2025-04-28 09:43:21,507 | INFO     | adding to output.list: log.44292257._009468.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/e9/log.44292257._009468.job.log.tg
[2025-04-28 11:43:40] 2025-04-28 09:43:21,507 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-28 11:43:40] 2025-04-28 09:43:21,507 | INFO     | summary of transferred files:
[2025-04-28 11:43:40] 2025-04-28 09:43:21,507 | INFO     |  -- lfn=log.44292257._009468.job.log.tgz.1, status_code=0, status=transferred
[2025-04-28 11:43:40] 2025-04-28 09:43:21,507 | INFO     | stage-out finished correctly
[2025-04-28 11:43:40] 2025-04-28 09:43:22,787 | WARNING  | process 408268 can no longer be monitored (due to stat problems) - aborting
[2025-04-28 11:43:40] 2025-04-28 09:43:22,787 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6617461031/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 11:43:40] 2025-04-28 09:43:22,787 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6617461031/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 11:43:40] 2025-04-28 09:43:22,816 | INFO     | number of running child processes to parent process 408268: 1
[2025-04-28 11:43:40] 2025-04-28 09:43:22,816 | INFO     | maximum number of monitored processes: 6
[2025-04-28 11:43:40] 2025-04-28 09:43:23,900 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-28 11:43:40] 2025-04-28 09:43:25,212 | INFO     | job 6617461031 has state=finished
[2025-04-28 11:43:40] 2025-04-28 09:43:25,212 | INFO     | preparing for final server update for job 6617461031 in state='finished'
[2025-04-28 11:43:40] 2025-04-28 09:43:25,212 | INFO     | this job has now completed (state=finished)
[2025-04-28 11:43:40] 2025-04-28 09:43:25,212 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-28 11:43:40] 2025-04-28 09:43:25,212 | INFO     | log transfer has been attempted: DONE
[2025-04-28 11:43:40] 2025-04-28 09:43:25,212 | INFO     | job 6617461031 has finished - writing final server update
[2025-04-28 11:43:40] 2025-04-28 09:43:25,213 | INFO     | total number of processed events: 400 (read)
[2025-04-28 11:43:40] 2025-04-28 09:43:25,214 | INFO     | executing command: lscpu
[2025-04-28 11:43:40] 2025-04-28 09:43:25,224 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-28 11:43:40] 2025-04-28 09:43:25,319 | INFO     | monitor loop #410: job 0:6617461031 is in state 'finished'
[2025-04-28 11:43:40] 2025-04-28 09:43:25,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 11:43:40] 2025-04-28 09:43:26,808 | INFO     | PID=401840 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-28 11:43:40] 2025-04-28 09:43:26,808 | INFO     | .. there are 2 such processes running
[2025-04-28 11:43:40] 2025-04-28 09:43:26,844 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-28 11:43:40] 2025-04-28 09:43:26,844 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6617461031/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 11:43:40] 2025-04-28 09:43:26,844 | INFO     | extracted standard info from prmon json
[2025-04-28 11:43:40] 2025-04-28 09:43:26,844 | INFO     | extracted standard memory fields from prmon json
[2025-04-28 11:43:40] 2025-04-28 09:43:26,845 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-28 11:43:40] 2025-04-28 09:43:26,845 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-28 11:43:40] 2025-04-28 09:43:26,845 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-28 11:43:40] 2025-04-28 09:43:26,845 | INFO     | fitting pss+swap vs Time
[2025-04-28 11:43:40] 2025-04-28 09:43:26,845 | INFO     | sum of square deviations: 164765880.0
[2025-04-28 11:43:40] 2025-04-28 09:43:26,845 | INFO     | sum of deviations: -5700576147.999999
[2025-04-28 11:43:40] 2025-04-28 09:43:26,845 | INFO     | mean x: 1745830820.0
[2025-04-28 11:43:40] 2025-04-28 09:43:26,845 | INFO     | mean y: 2452327.160493827
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | -- intersect: 60404773068.17362
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | intersect: 60404773068.17362
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | chi2: 0.027282316881030517
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | -- intersect: 60404773068.17362
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | current memory leak: -34.60 B/s (using 81 data points, chi2=0.03)
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | ..............................
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | . Timing measurements:
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | . get job = 0 s
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | . initial setup = 1 s
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | . payload setup = 4 s
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | . stage-in = 0 s
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | . payload execution = 5325 s
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | . stage-out = 0 s
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | . log creation = 0 s
[2025-04-28 11:43:40] 2025-04-28 09:43:26,846 | INFO     | ..............................
[2025-04-28 11:43:40] 2025-04-28 09:43:27,212 | INFO     | 
[2025-04-28 11:43:40] 2025-04-28 09:43:27,212 | INFO     | job summary report
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | --------------------------------------------------
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | PanDA job id: 6617461031
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | task id: 44292257
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | errors: (none)
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | pilot state: finished 
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | transexitcode: 0
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | exeerrorcode: 0
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | exeerrordiag: 
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | exitcode: 0
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | exitmsg: OK
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | cpuconsumptiontime: 19991 s
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | nevents: 400
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | neventsw: 0
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | pid: 408268
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | pgrp: 408268
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | corecount: 4
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | event service: False
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | sizes: {0: 2393728, 4: 2393934, 11: 2393962, 5334: 2420478, 5335: 2429421, 5337: 2429477, 5340: 2429775}
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | --------------------------------------------------
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | 
[2025-04-28 11:43:40] 2025-04-28 09:43:27,213 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/0
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,222 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,222 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 11:43:40] 2025-04-28 09:43:27,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,222 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 11:43:40] 2025-04-28 09:43:27,222 | INFO     | job 6617461031 has completed (purged errors)
[2025-04-28 11:43:40] 2025-04-28 09:43:27,222 | INFO     | overall cleanup function is called
[2025-04-28 11:43:40] 2025-04-28 09:43:28,228 | INFO     | --- collectZombieJob: --- 10, [408268]
[2025-04-28 11:43:40] 2025-04-28 09:43:28,228 | INFO     | zombie collector waiting for pid 408268
[2025-04-28 11:43:40] 2025-04-28 09:43:28,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 11:43:40] 2025-04-28 09:43:28,228 | INFO     | collected zombie processes
[2025-04-28 11:43:40] 2025-04-28 09:43:28,228 | INFO     | will attempt to kill all subprocesses of pid=408268
[2025-04-28 11:43:40] 2025-04-28 09:43:28,261 | INFO     | process IDs to be killed: [408268] (in reverse order)
[2025-04-28 11:43:40] 2025-04-28 09:43:28,281 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 11:43:40] 2025-04-28 09:43:28,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 11:43:40] 2025-04-28 09:43:28,283 | INFO     | did not find any defunct processes belonging to 408268
[2025-04-28 11:43:40] 2025-04-28 09:43:28,284 | INFO     | did not find any defunct processes belonging to 408268
[2025-04-28 11:43:40] 2025-04-28 09:43:28,284 | INFO     | ready for new job
[2025-04-28 11:43:40] 2025-04-28 09:43:28,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 11:43:40] 2025-04-28 09:43:28,285 | INFO     | **************************************
[2025-04-28 11:43:40] 2025-04-28 09:43:28,285 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 11:43:40] 2025-04-28 09:43:28,285 | INFO     | **************************************
[2025-04-28 11:43:40] 2025-04-28 09:43:28,285 | INFO     | 
[2025-04-28 11:43:40] 2025-04-28 09:43:28,285 | INFO     | architecture information:
[2025-04-28 11:43:40] 2025-04-28 09:43:28,285 | INFO     | executing command: cat /etc/os-release
[2025-04-28 11:43:40] 2025-04-28 09:43:28,291 | INFO     | cat /etc/os-release:
[2025-04-28 11:43:40] NAME="CentOS Linux"
[2025-04-28 11:43:40] VERSION="7 (Core)"
[2025-04-28 11:43:40] ID="centos"
[2025-04-28 11:43:40] ID_LIKE="rhel fedora"
[2025-04-28 11:43:40] VERSION_ID="7"
[2025-04-28 11:43:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 11:43:40] ANSI_COLOR="0;31"
[2025-04-28 11:43:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 11:43:40] HOME_URL="https://www.centos.org/"
[2025-04-28 11:43:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 11:43:40] 
[2025-04-28 11:43:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 11:43:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 11:43:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 11:43:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 11:43:40] 
[2025-04-28 11:43:40] 2025-04-28 09:43:28,291 | INFO     | **************************************
[2025-04-28 11:43:40] 2025-04-28 09:43:28,794 | INFO     | executing command: df -mP /var/lib/boinc3/slots/0
[2025-04-28 11:43:40] 2025-04-28 09:43:28,800 | INFO     | sufficient remaining disk space (94134861824 B)
[2025-04-28 11:43:40] 2025-04-28 09:43:28,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 11:43:40] 2025-04-28 09:43:28,800 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 11:43:40] 2025-04-28 09:43:28,800 | INFO     | update_server=False
[2025-04-28 11:43:40] 2025-04-28 09:43:28,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 11:43:40] 2025-04-28 09:43:28,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 11:43:40] 2025-04-28 09:43:28,813 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 11:43:40] 2025-04-28 09:43:28,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 11:43:40] 2025-04-28 09:43:28,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 11:43:40] 2025-04-28 09:43:28,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 11:43:40] 2025-04-28 09:43:28,827 | INFO     | aborting loop
[2025-04-28 11:43:40] 2025-04-28 09:43:28,939 | INFO     | all payload control threads have been joined
[2025-04-28 11:43:40] 2025-04-28 09:43:29,253 | INFO     | all data control threads have been joined
[2025-04-28 11:43:40] 2025-04-28 09:43:29,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 11:43:40] 2025-04-28 09:43:29,805 | INFO     | [job] retrieve thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:29,806 | INFO     | [job] queue monitor thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:29,832 | INFO     | [job] job monitor thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:29,907 | INFO     | [job] validate thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:29,921 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:29,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 11:43:40] 2025-04-28 09:43:29,940 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:29,945 | INFO     | [payload] control thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:29,971 | INFO     | all job control threads have been joined
[2025-04-28 11:43:40] 2025-04-28 09:43:30,010 | INFO     | [payload] validate_post thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:30,258 | INFO     | [data] control thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:30,303 | INFO     | [payload] failed_post thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:30,936 | INFO     | [data] copytool_in thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:30,976 | INFO     | [job] control thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:30,983 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:31,274 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:31,549 | INFO     | [data] copytool_out thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:33,936 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 11:43:40] 2025-04-28 09:43:34,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128109542508352)>', '<ExcThread(monitor, started 128109034579712)>']
[2025-04-28 11:43:40] 2025-04-28 09:43:35,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 11:43:40] 2025-04-28 09:43:35,848 | INFO     | [monitor] control thread has ended
[2025-04-28 11:43:40] 2025-04-28 09:43:39,993 | INFO     | all workflow threads have been joined
[2025-04-28 11:43:40] 2025-04-28 09:43:39,993 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 11:43:40] 2025-04-28 09:43:39,994 | INFO     | traces error code: 0
[2025-04-28 11:43:40] 2025-04-28 09:43:39,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 11:43:40] 2025-04-28 09:43:40,038 [wrapper] ==== pilot stdout END ====
[2025-04-28 11:43:40] 2025-04-28 09:43:40,039 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 11:43:40] 2025-04-28 09:43:40,040 [wrapper] pilotpid: 401840
[2025-04-28 11:43:40] 2025-04-28 09:43:40,041 [wrapper] Pilot exit status: 0
[2025-04-28 11:43:40] 2025-04-28 09:43:40,045 [wrapper] pandaids: 6617461031
[2025-04-28 11:43:40] 2025-04-28 09:43:40,058 [wrapper] cleanup supervisor_pilot  440896 401841
[2025-04-28 11:43:40] 2025-04-28 09:43:40,059 [wrapper] Test setup, not cleaning
[2025-04-28 11:43:40] 2025-04-28 09:43:40,060 [wrapper] apfmon messages muted
[2025-04-28 11:43:40] 2025-04-28 09:43:40,061 [wrapper] ==== wrapper stdout END ====
[2025-04-28 11:43:40] 2025-04-28 09:43:40,062 [wrapper] ==== wrapper stderr END ====
[2025-04-28 11:43:40]  *** Error codes and diagnostics ***
[2025-04-28 11:43:40]     "exeErrorCode": 0,
[2025-04-28 11:43:40]     "exeErrorDiag": "",
[2025-04-28 11:43:40]     "pilotErrorCode": 0,
[2025-04-28 11:43:40]     "pilotErrorDiag": "",
[2025-04-28 11:43:40]  *** Listing of results directory ***
[2025-04-28 11:43:40] insgesamt 416284
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc    495897 26. Apr 15:55 pilot3.tar.gz
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc      5111 26. Apr 15:55 queuedata.json
[2025-04-28 11:43:40] -rwx------ 1 boinc boinc     37140 26. Apr 15:57 runpilot2-wrapper.sh
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc       100 28. Apr 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 11:43:40] -rwxr-xr-x 1 boinc boinc      7986 28. Apr 10:14 run_atlas
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc       105 28. Apr 10:14 job.xml
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc      9582 28. Apr 10:14 init_data.xml
[2025-04-28 11:43:40] -rw-r--r-- 2 boinc boinc 227338043 28. Apr 10:14 EVNT.44292255._000378.pool.root.1
[2025-04-28 11:43:40] -rw-r--r-- 2 boinc boinc     17569 28. Apr 10:14 start_atlas.sh
[2025-04-28 11:43:40] drwxrwx--x 2 boinc boinc      4096 28. Apr 10:14 shared
[2025-04-28 11:43:40] -rw-r--r-- 2 boinc boinc    508884 28. Apr 10:14 input.tar.gz
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc         0 28. Apr 10:14 boinc_lockfile
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc      2549 28. Apr 10:14 pandaJob.out
[2025-04-28 11:43:40] -rw------- 1 boinc boinc       461 28. Apr 10:14 setup.sh.local
[2025-04-28 11:43:40] -rw------- 1 boinc boinc    992850 28. Apr 10:14 agis_schedconf.cvmfs.json
[2025-04-28 11:43:40] -rw------- 1 boinc boinc   1596659 28. Apr 10:14 agis_ddmendpoints.agis.ALL.json
[2025-04-28 11:43:40] drwx------ 4 boinc boinc      4096 28. Apr 10:14 pilot3
[2025-04-28 11:43:40] -rw------- 1 boinc boinc        95 28. Apr 11:42 pilot_heartbeat.json
[2025-04-28 11:43:40] -rw------- 1 boinc boinc 193508237 28. Apr 11:43 HITS.44292257._009468.pool.root.1
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc       530 28. Apr 11:43 boinc_task_state.xml
[2025-04-28 11:43:40] -rw------- 1 boinc boinc      1022 28. Apr 11:43 memory_monitor_summary.json
[2025-04-28 11:43:40] -rw------- 1 boinc boinc    256782 28. Apr 11:43 log.44292257._009468.job.log.tgz.1
[2025-04-28 11:43:40] -rw------- 1 boinc boinc      7673 28. Apr 11:43 heartbeat.json
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc      8192 28. Apr 11:43 boinc_mmap_file
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc        27 28. Apr 11:43 wrapper_checkpoint.txt
[2025-04-28 11:43:40] -rw------- 1 boinc boinc      4354 28. Apr 11:43 pilotlog.txt
[2025-04-28 11:43:40] -rw------- 1 boinc boinc    533100 28. Apr 11:43 log.44292257._009468.job.log.1
[2025-04-28 11:43:40] -rw------- 1 boinc boinc       357 28. Apr 11:43 output.list
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc       620 28. Apr 11:43 runtime_log
[2025-04-28 11:43:40] -rw------- 1 boinc boinc    808960 28. Apr 11:43 result.tar.gz
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc     11363 28. Apr 11:43 runtime_log.err
[2025-04-28 11:43:40] -rw------- 1 boinc boinc       642 28. Apr 11:43 IZLKDmHDvS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmAeqLDm29ZVtn.diag
[2025-04-28 11:43:40] -rw-r--r-- 1 boinc boinc     21201 28. Apr 11:43 stderr.txt
[2025-04-28 11:43:40] HITS file was successfully produced:
[2025-04-28 11:43:40] -rw------- 1 boinc boinc 193508237 28. Apr 11:43 shared/HITS.pool.root.1
[2025-04-28 11:43:40]  *** Contents of shared directory: ***
[2025-04-28 11:43:40] insgesamt 412304
[2025-04-28 11:43:40] -rw-r--r-- 2 boinc boinc 227338043 28. Apr 10:14 ATLAS.root_0
[2025-04-28 11:43:40] -rw-r--r-- 2 boinc boinc     17569 28. Apr 10:14 start_atlas.sh
[2025-04-28 11:43:40] -rw-r--r-- 2 boinc boinc    508884 28. Apr 10:14 input.tar.gz
[2025-04-28 11:43:40] -rw------- 1 boinc boinc 193508237 28. Apr 11:43 HITS.pool.root.1
[2025-04-28 11:43:40] -rw------- 1 boinc boinc    808960 28. Apr 11:43 result.tar.gz
11:43:41 (398195): run_atlas exited; CPU time 20025.405484
11:43:41 (398195): called boinc_finish(0)

</stderr_txt>
]]>

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