Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-27 08:45:15 (50756): Detected: vboxwrapper 26206
2025-04-27 08:45:15 (50756): Detected: BOINC client v8.2.1
2025-04-27 08:45:15 (50756): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-04-27 08:45:16 (50756): Successfully copied 'init_data.xml' to the shared directory.
2025-04-27 08:45:16 (50756): Create VM. (boinc_52e263cb60d2d8be, slot#29)
2025-04-27 08:45:17 (50756): Setting Memory Size for VM. (4096MB)
2025-04-27 08:45:17 (50756): Setting CPU Count for VM. (1)
2025-04-27 08:45:17 (50756): Setting Chipset Options for VM.
2025-04-27 08:45:18 (50756): Setting Graphics Controller Options for VM.
2025-04-27 08:45:18 (50756): Setting Boot Options for VM.
2025-04-27 08:45:18 (50756): Setting Network Configuration for NAT.
2025-04-27 08:45:18 (50756): Enabling VM Network Access.
2025-04-27 08:45:19 (50756): Disabling USB Support for VM.
2025-04-27 08:45:19 (50756): Disabling COM Port Support for VM.
2025-04-27 08:45:19 (50756): Disabling LPT Port Support for VM.
2025-04-27 08:45:19 (50756): Disabling Audio Support for VM.
2025-04-27 08:45:20 (50756): Disabling Clipboard Support for VM.
2025-04-27 08:45:20 (50756): Disabling Drag and Drop Support for VM.
2025-04-27 08:45:20 (50756): Adding storage controller(s) to VM.
2025-04-27 08:45:20 (50756): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-27 08:45:21 (50756): Adding VirtualBox Guest Additions to VM.
2025-04-27 08:45:21 (50756): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-27 08:45:21 (50756): forwarding host port 64678 to guest port 80
2025-04-27 08:45:22 (50756): Enabling remote desktop for VM.
2025-04-27 08:45:22 (50756): Required extension pack not installed, remote desktop not enabled.
2025-04-27 08:45:22 (50756): Enabling shared directory for VM.
2025-04-27 08:45:22 (50756): Starting VM using VBoxManage interface. (boinc_52e263cb60d2d8be, slot#29)
2025-04-27 08:45:27 (50756): Successfully started VM. (PID = '47852')
2025-04-27 08:45:27 (50756): Reporting VM Process ID to BOINC.
2025-04-27 08:45:27 (50756): Guest Log: BIOS: VirtualBox 7.1.8
2025-04-27 08:45:27 (50756): Guest Log: CPUID EDX: 0x178bfbff
2025-04-27 08:45:27 (50756): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-27 08:45:27 (50756): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-27 08:45:27 (50756): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-27 08:45:27 (50756): Detected: Web Application Enabled (http://localhost:64678)
2025-04-27 08:45:27 (50756): Preference change detected
2025-04-27 08:45:27 (50756): Setting CPU throttle for VM. (100%)
2025-04-27 08:45:27 (50756): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-27 08:45:29 (50756): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-27 08:45:29 (50756): Guest Log: BIOS: Booting from Hard Disk...
2025-04-27 08:45:31 (50756): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-27 08:45:31 (50756): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-27 08:45:31 (50756): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-27 08:45:34 (50756): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-27 08:45:34 (50756): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-27 08:45:39 (50756): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-27 08:45:39 (50756): Guest Log: 00:00:00.000133 main     Log opened 2025-04-27T08:45:37.786964000Z
2025-04-27 08:45:39 (50756): Guest Log: 00:00:00.000261 main     OS Product: Linux
2025-04-27 08:45:39 (50756): Guest Log: 00:00:00.000283 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-27 08:45:39 (50756): Guest Log: 00:00:00.000298 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-27 08:45:39 (50756): Guest Log: 00:00:00.000313 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-27 08:45:39 (50756): Guest Log: 00:00:00.000313 main     Process ID: 1246
2025-04-27 08:45:39 (50756): Guest Log: 00:00:00.000314 main     Package type: LINUX_64BITS_GENERIC
2025-04-27 08:45:39 (50756): Guest Log: 00:00:00.001043 main     5.2.32 r132073 started. Verbose level = 0
2025-04-27 08:45:39 (50756): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-27 08:45:39 (50756): Guest Log: [INFO] Mounting shared directory
2025-04-27 08:45:39 (50756): Guest Log: [INFO] Checking for init_data.xml
2025-04-27 08:45:42 (50756): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-27 08:45:42 (50756): Guest Log: [INFO] Detected branch: prod
2025-04-27 08:45:42 (50756): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-27 08:45:42 (50756): Guest Log: Copying input files
2025-04-27 08:45:43 (50756): Guest Log: Copied input files into RunAtlas.
2025-04-27 08:45:43 (50756): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-27 08:45:49 (50756): Guest Log: 00:00:10.014431 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 685 160 000ns (GuestNow=1 745 736 349 115 529 000 ns GuestLast=1 745 743 537 800 689 000 ns fSetTimeLastLoop=true )
2025-04-27 08:45:53 (50756): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-27 08:45:53 (50756): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-27 08:45:53 (50756): Guest Log: 2.6.3.0 1515 0 31548 145329 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-27 08:45:54 (50756): Guest Log: copied the webapp to /var/www
2025-04-27 08:45:54 (50756): Guest Log: core_number=1
2025-04-27 08:45:54 (50756): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-27 08:45:54 (50756): Guest Log:  *** Starting ATLAS job. (PandaID=6617612579 taskID=44292257) ***
2025-04-27 10:25:30 (50756): Status Report: Elapsed Time: '6000.000000'
2025-04-27 10:25:30 (50756): Status Report: CPU Time: '5796.859375'
2025-04-27 12:05:33 (50756): Status Report: Elapsed Time: '12000.000000'
2025-04-27 12:05:33 (50756): Status Report: CPU Time: '11774.718750'
2025-04-27 13:45:35 (50756): Status Report: Elapsed Time: '18000.000000'
2025-04-27 13:45:35 (50756): Status Report: CPU Time: '17751.484375'
2025-04-27 15:25:38 (50756): Status Report: Elapsed Time: '24000.000000'
2025-04-27 15:25:38 (50756): Status Report: CPU Time: '23725.796875'
2025-04-27 16:38:32 (50756): Guest Log:  *** Job finished ***
2025-04-27 16:38:32 (50756): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:11,779 | INFO     | [payload] control thread has finished
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:12,132 | INFO     | [data] copytool_out thread has finished
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:14,676 | INFO     | [data] queue_monitor thread has finished
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:16,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057172490048)>', '<ExcThread(monitor, started 140056585033472)>']
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:16,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:16,929 | INFO     | [monitor] control thread has ended
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,076 | INFO     | all workflow threads have been joined
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,076 | INFO     | end of generic workflow (traces error code: 0)
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,076 | INFO     | traces error code: 0
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,181 [wrapper] ==== pilot stdout END ====
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,183 [wrapper] ==== wrapper stdout RESUME ====
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,185 [wrapper] pilotpid: 5769
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,187 [wrapper] Pilot exit status: 0
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,199 [wrapper] pandaids: 6617612579
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,213 [wrapper] cleanup supervisor_pilot  5184 5770
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,215 [wrapper] Test setup, not cleaning
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,217 [wrapper] apfmon messages muted
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,219 [wrapper] ==== wrapper stdout END ====
2025-04-27 16:38:32 (50756): Guest Log: 2025-04-27 14:38:21,221 [wrapper] ==== wrapper stderr END ====
2025-04-27 16:38:32 (50756): Guest Log:  *** Error codes and diagnostics ***
2025-04-27 16:38:32 (50756): Guest Log:     "exeErrorCode": 0,
2025-04-27 16:38:32 (50756): Guest Log:     "exeErrorDiag": "",
2025-04-27 16:38:32 (50756): Guest Log:     "pilotErrorCode": 0,
2025-04-27 16:38:32 (50756): Guest Log:     "pilotErrorDiag": "",
2025-04-27 16:38:32 (50756): Guest Log:  *** Listing of results directory ***
2025-04-27 16:38:32 (50756): Guest Log: total 202204
2025-04-27 16:38:32 (50756): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 26 21:22 pilot3.tar.gz
2025-04-27 16:38:32 (50756): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 26 21:28 runpilot2-wrapper.sh
2025-04-27 16:38:32 (50756): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 26 21:28 queuedata.json
2025-04-27 16:38:32 (50756): Guest Log: -rwxr-xr-x. 1 atlas atlas      9354 Apr 27 06:45 init_data.xml
2025-04-27 16:38:32 (50756): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 Apr 27 06:45 input.tar.gz
2025-04-27 16:38:32 (50756): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 27 06:45 start_atlas.sh
2025-04-27 16:38:32 (50756): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 27 06:45 EVNT.44292255._001286.pool.root.1 -> /data/./ATLAS.root_0
2025-04-27 16:38:32 (50756): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Apr 27 06:45 pandaJob.out
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas       460 Apr 27 06:45 setup.sh.local
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas    993168 Apr 27 06:46 agis_schedconf.cvmfs.json
2025-04-27 16:38:32 (50756): Guest Log: drwx------. 4 atlas atlas      4096 Apr 27 06:46 pilot3
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas        95 Apr 27 14:37 pilot_heartbeat.json
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas 197394750 Apr 27 14:37 HITS.44292257._013309.pool.root.1
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas      1022 Apr 27 14:38 memory_monitor_summary.json
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 27 14:38 agis_ddmendpoints.agis.ALL.json
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas    420056 Apr 27 14:38 log.44292257._013309.job.log.tgz.1
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas      7672 Apr 27 14:38 heartbeat.json
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 27 14:38 pilotlog.txt
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas   2523493 Apr 27 14:38 log.44292257._013309.job.log.1
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas       357 Apr 27 14:38 output.list
2025-04-27 16:38:32 (50756): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 27 14:38 runtime_log
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas   2959360 Apr 27 14:38 result.tar.gz
2025-04-27 16:38:32 (50756): Guest Log: -rw-r--r--. 1 atlas atlas     11174 Apr 27 14:38 runtime_log.err
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas       657 Apr 27 14:38 Fs4LDmQF2S7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOKrLDmLPBb5n.diag
2025-04-27 16:38:32 (50756): Guest Log: Looking for outputfile HITS.44292257._013309.pool.root.1
2025-04-27 16:38:32 (50756): Guest Log: HITS file was successfully produced
2025-04-27 16:38:32 (50756): Guest Log: -rw-------. 1 atlas atlas 197394750 Apr 27 14:37 /home/atlas/RunAtlas/HITS.44292257._013309.pool.root.1
2025-04-27 16:38:33 (50756): Guest Log: Successfully finished the ATLAS job!
2025-04-27 16:38:33 (50756): Guest Log: Copying the results back to the shared directory!
2025-04-27 16:38:33 (50756): Guest Log:  *** Contents of shared directory: ***
2025-04-27 16:38:33 (50756): Guest Log: total 418412
2025-04-27 16:38:33 (50756): Guest Log: -rwxrwxrwx. 1 root root 227546490 Apr 27 06:45 ATLAS.root_0
2025-04-27 16:38:33 (50756): Guest Log: -rwxrwxrwx. 1 root root 197394750 Apr 27  2025 HITS.pool.root.1
2025-04-27 16:38:33 (50756): Guest Log: -rwxrwxrwx. 1 root root      9354 Apr 27 06:45 init_data.xml
2025-04-27 16:38:33 (50756): Guest Log: -rwxrwxrwx. 1 root root    508881 Apr 27 06:44 input.tar.gz
2025-04-27 16:38:33 (50756): Guest Log: -rwxrwxrwx. 1 root root   2959360 Apr 27  2025 result.tar.gz
2025-04-27 16:38:33 (50756): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 27 06:44 start_atlas.sh
2025-04-27 16:38:33 (50756): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-27 16:38:33 (50756): VM Completion File Detected.
2025-04-27 16:38:33 (50756): Powering off VM.
2025-04-27 16:38:34 (50756): Successfully stopped VM.
2025-04-27 16:38:34 (50756): Deregistering VM. (boinc_52e263cb60d2d8be, slot#29)
2025-04-27 16:38:34 (50756): Removing network bandwidth throttle group from VM.
2025-04-27 16:38:34 (50756): Removing VM from VirtualBox.
16:38:39 (50756): called boinc_finish(0)

</stderr_txt>
]]>

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