Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-27 07:15:03 (11404): Detected: vboxwrapper 26206
2025-04-27 07:15:03 (11404): Detected: BOINC client v8.0.2
2025-04-27 07:15:03 (11404): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-04-27 07:15:03 (11404): Successfully copied 'init_data.xml' to the shared directory.
2025-04-27 07:15:04 (11404): Create VM. (boinc_eec9f99c5e44ed25, slot#6)
2025-04-27 07:15:04 (11404): Setting Memory Size for VM. (4300MB)
2025-04-27 07:15:05 (11404): Setting CPU Count for VM. (3)
2025-04-27 07:15:05 (11404): Setting Chipset Options for VM.
2025-04-27 07:15:05 (11404): Setting Graphics Controller Options for VM.
2025-04-27 07:15:06 (11404): Setting Boot Options for VM.
2025-04-27 07:15:06 (11404): Setting Network Configuration for NAT.
2025-04-27 07:15:06 (11404): Enabling VM Network Access.
2025-04-27 07:15:06 (11404): Disabling USB Support for VM.
2025-04-27 07:15:07 (11404): Disabling COM Port Support for VM.
2025-04-27 07:15:07 (11404): Disabling LPT Port Support for VM.
2025-04-27 07:15:07 (11404): Disabling Audio Support for VM.
2025-04-27 07:15:07 (11404): Disabling Clipboard Support for VM.
2025-04-27 07:15:08 (11404): Disabling Drag and Drop Support for VM.
2025-04-27 07:15:08 (11404): Adding storage controller(s) to VM.
2025-04-27 07:15:08 (11404): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-27 07:15:09 (11404): Adding VirtualBox Guest Additions to VM.
2025-04-27 07:15:09 (11404): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-27 07:15:09 (11404): forwarding host port 62553 to guest port 80
2025-04-27 07:15:09 (11404): Enabling remote desktop for VM.
2025-04-27 07:15:10 (11404): Required extension pack not installed, remote desktop not enabled.
2025-04-27 07:15:10 (11404): Enabling shared directory for VM.
2025-04-27 07:15:10 (11404): Starting VM using VBoxManage interface. (boinc_eec9f99c5e44ed25, slot#6)
2025-04-27 07:15:15 (11404): Successfully started VM. (PID = '17412')
2025-04-27 07:15:15 (11404): Reporting VM Process ID to BOINC.
2025-04-27 07:15:15 (11404): Guest Log: BIOS: VirtualBox 7.1.8
2025-04-27 07:15:15 (11404): Guest Log: CPUID EDX: 0x178bfbff
2025-04-27 07:15:15 (11404): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-27 07:15:15 (11404): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-27 07:15:15 (11404): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-27 07:15:15 (11404): Detected: Web Application Enabled (http://localhost:62553)
2025-04-27 07:15:15 (11404): Preference change detected
2025-04-27 07:15:15 (11404): Setting CPU throttle for VM. (100%)
2025-04-27 07:15:15 (11404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-27 07:15:17 (11404): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-27 07:15:17 (11404): Guest Log: BIOS: Booting from Hard Disk...
2025-04-27 07:15:19 (11404): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-27 07:15:19 (11404): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-27 07:15:19 (11404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-27 07:16:25 (11404): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-27 07:16:25 (11404): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-27 07:16:29 (11404): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-27 07:16:29 (11404): Guest Log: 00:00:00.000070 main     Log opened 2025-04-27T07:16:27.312033000Z
2025-04-27 07:16:29 (11404): Guest Log: 00:00:00.000168 main     OS Product: Linux
2025-04-27 07:16:29 (11404): Guest Log: 00:00:00.000185 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-27 07:16:29 (11404): Guest Log: 00:00:00.000199 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-27 07:16:29 (11404): Guest Log: 00:00:00.000215 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-27 07:16:29 (11404): Guest Log: 00:00:00.000216 main     Process ID: 1291
2025-04-27 07:16:29 (11404): Guest Log: 00:00:00.000216 main     Package type: LINUX_64BITS_GENERIC
2025-04-27 07:16:29 (11404): Guest Log: 00:00:00.000735 main     5.2.32 r132073 started. Verbose level = 0
2025-04-27 07:16:29 (11404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-27 07:16:29 (11404): Guest Log: [INFO] Mounting shared directory
2025-04-27 07:16:29 (11404): Guest Log: [INFO] Checking for init_data.xml
2025-04-27 07:16:34 (11404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-27 07:16:34 (11404): Guest Log: [INFO] Detected branch: prod
2025-04-27 07:16:34 (11404): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-27 07:16:34 (11404): Guest Log: Copying input files
2025-04-27 07:16:35 (11404): Guest Log: Copied input files into RunAtlas.
2025-04-27 07:16:35 (11404): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-27 07:16:35 (11404): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-27 07:16:35 (11404): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-27 07:16:35 (11404): Guest Log: Further information can be found at the LHC@home message board.
2025-04-27 07:16:39 (11404): Guest Log: 00:00:10.001721 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 191 751 232 000ns (GuestNow=1 745 730 995 562 197 000 ns GuestLast=1 745 738 187 313 429 000 ns fSetTimeLastLoop=true )
2025-04-27 07:16:43 (11404): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-27 07:16:44 (11404): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-27 07:16:44 (11404): Guest Log: 2.6.3.0 1565 0 32200 145327 3 1 3117322 4096000 0 65024 1 0 n/a 1 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-27 07:16:44 (11404): Guest Log: copied the webapp to /var/www
2025-04-27 07:16:44 (11404): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-27 07:16:44 (11404): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-27 07:16:45 (11404): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-27 07:16:45 (11404): Guest Log:  *** Starting ATLAS job. (PandaID=6617611272 taskID=44292257) ***
2025-04-27 08:12:13 (11404): Preference change detected
2025-04-27 08:12:13 (11404): Setting CPU throttle for VM. (90%)
2025-04-27 08:12:15 (11404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-27 08:33:05 (11404): Preference change detected
2025-04-27 08:33:05 (11404): Setting CPU throttle for VM. (100%)
2025-04-27 08:33:05 (11404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-27 08:56:22 (11404): Status Report: Elapsed Time: '6000.593191'
2025-04-27 08:56:22 (11404): Status Report: CPU Time: '13723.171875'
2025-04-27 09:03:17 (11404): Preference change detected
2025-04-27 09:03:17 (11404): Setting CPU throttle for VM. (90%)
2025-04-27 09:03:19 (11404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-27 09:59:03 (11404): Preference change detected
2025-04-27 09:59:03 (11404): Setting CPU throttle for VM. (100%)
2025-04-27 09:59:03 (11404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-27 10:28:34 (11404): Guest Log:  *** Job finished ***
2025-04-27 10:28:34 (11404): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:30,651 | INFO     | [job] control thread has finished
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:31,591 | INFO     | [data] copytool_out thread has finished
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:32,544 | INFO     | [data] queue_monitor thread has finished
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:33,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010572191552)>', '<ExcThread(monitor, started 140010128914176)>']
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:34,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:34,143 | INFO     | [monitor] control thread has ended
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,312 | INFO     | all workflow threads have been joined
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,312 | INFO     | end of generic workflow (traces error code: 0)
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,312 | INFO     | traces error code: 0
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,389 [wrapper] ==== pilot stdout END ====
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,392 [wrapper] ==== wrapper stdout RESUME ====
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,395 [wrapper] pilotpid: 5895
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,397 [wrapper] Pilot exit status: 0
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,757 [wrapper] pandaids: 6617611272
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,774 [wrapper] cleanup supervisor_pilot  9221 5896
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,777 [wrapper] Test setup, not cleaning
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,780 [wrapper] apfmon messages muted
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,782 [wrapper] ==== wrapper stdout END ====
2025-04-27 10:28:34 (11404): Guest Log: 2025-04-27 08:28:38,784 [wrapper] ==== wrapper stderr END ====
2025-04-27 10:28:34 (11404): Guest Log:  *** Error codes and diagnostics ***
2025-04-27 10:28:34 (11404): Guest Log:     "exeErrorCode": 0,
2025-04-27 10:28:34 (11404): Guest Log:     "exeErrorDiag": "",
2025-04-27 10:28:34 (11404): Guest Log:     "pilotErrorCode": 0,
2025-04-27 10:28:34 (11404): Guest Log:     "pilotErrorDiag": "",
2025-04-27 10:28:34 (11404): Guest Log:  *** Listing of results directory ***
2025-04-27 10:28:34 (11404): Guest Log: total 195792
2025-04-27 10:28:34 (11404): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 26 19:36 pilot3.tar.gz
2025-04-27 10:28:34 (11404): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 26 19:46 queuedata.json
2025-04-27 10:28:34 (11404): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 26 19:47 runpilot2-wrapper.sh
2025-04-27 10:28:34 (11404): Guest Log: -rwxr-xr-x. 1 atlas atlas      9072 Apr 27 05:16 init_data.xml
2025-04-27 10:28:34 (11404): Guest Log: -rwxr-xr-x. 1 atlas atlas    508883 Apr 27 05:16 input.tar.gz
2025-04-27 10:28:34 (11404): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 27 05:16 start_atlas.sh
2025-04-27 10:28:34 (11404): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 27 05:16 EVNT.44292255._001256.pool.root.1 -> /data/./ATLAS.root_0
2025-04-27 10:28:34 (11404): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Apr 27 05:16 pandaJob.out
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas       424 Apr 27 05:16 setup.sh.local
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas    993168 Apr 27 05:18 agis_schedconf.cvmfs.json
2025-04-27 10:28:34 (11404): Guest Log: drwx------. 4 atlas atlas      4096 Apr 27 05:19 pilot3
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas 194153842 Apr 27 08:27 HITS.44292257._012557.pool.root.1
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas        95 Apr 27 08:28 pilot_heartbeat.json
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 27 08:28 memory_monitor_summary.json
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 27 08:28 agis_ddmendpoints.agis.ALL.json
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas    282653 Apr 27 08:28 log.44292257._012557.job.log.tgz.1
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas      7692 Apr 27 08:28 heartbeat.json
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas      4722 Apr 27 08:28 pilotlog.txt
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas    997804 Apr 27 08:28 log.44292257._012557.job.log.1
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas       357 Apr 27 08:28 output.list
2025-04-27 10:28:34 (11404): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 27 08:28 runtime_log
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas   1300480 Apr 27 08:28 result.tar.gz
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas       646 Apr 27 08:28 V0pKDmXf0S7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmt3ALDmWwUE6m.diag
2025-04-27 10:28:34 (11404): Guest Log: -rw-r--r--. 1 atlas atlas     10902 Apr 27 08:28 runtime_log.err
2025-04-27 10:28:34 (11404): Guest Log: Looking for outputfile HITS.44292257._012557.pool.root.1
2025-04-27 10:28:34 (11404): Guest Log: HITS file was successfully produced
2025-04-27 10:28:34 (11404): Guest Log: -rw-------. 1 atlas atlas 194153842 Apr 27 08:27 /home/atlas/RunAtlas/HITS.44292257._012557.pool.root.1
2025-04-27 10:28:35 (11404): Guest Log: Successfully finished the ATLAS job!
2025-04-27 10:28:35 (11404): Guest Log: Copying the results back to the shared directory!
2025-04-27 10:28:35 (11404): Guest Log:  *** Contents of shared directory: ***
2025-04-27 10:28:35 (11404): Guest Log: total 408320
2025-04-27 10:28:35 (11404): Guest Log: -rwxrwxrwx. 1 root root 222116406 Apr 27 05:15 ATLAS.root_0
2025-04-27 10:28:35 (11404): Guest Log: -rwxrwxrwx. 1 root root 194153842 Apr 27 08:28 HITS.pool.root.1
2025-04-27 10:28:35 (11404): Guest Log: -rwxrwxrwx. 1 root root      9072 Apr 27 05:15 init_data.xml
2025-04-27 10:28:35 (11404): Guest Log: -rwxrwxrwx. 1 root root    508883 Apr 27 04:31 input.tar.gz
2025-04-27 10:28:35 (11404): Guest Log: -rwxrwxrwx. 1 root root   1300480 Apr 27 08:28 result.tar.gz
2025-04-27 10:28:35 (11404): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 27 04:31 start_atlas.sh
2025-04-27 10:28:35 (11404): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-27 10:28:35 (11404): VM Completion File Detected.
2025-04-27 10:28:35 (11404): Powering off VM.
2025-04-27 10:28:35 (11404): Successfully stopped VM.
2025-04-27 10:28:35 (11404): Deregistering VM. (boinc_eec9f99c5e44ed25, slot#6)
2025-04-27 10:28:35 (11404): Removing network bandwidth throttle group from VM.
2025-04-27 10:28:36 (11404): Removing VM from VirtualBox.
10:28:41 (11404): called boinc_finish(0)

</stderr_txt>
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